HEADER HYDROLASE/INHIBITOR 08-APR-20 6WHF TITLE CLASS C BETA-LACTAMASE FROM ESCHERICHIA COLI IN COMPLEX WITH TITLE 2 CEPHALOTHIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: CLASS C BETA-LACTAMASE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 1269009; SOURCE 4 STRAIN: A35218R; SOURCE 5 GENE: BLA(AMPC-EC31), BLAEC, AJ318_17250, AZZ83_002790, D7Y10_20755, SOURCE 6 D7Y10_27165, D9L99_20655, D9L99_27090, DJ487_18405, DW236_18485, SOURCE 7 ELT23_15185; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CLASS C BETA-LACTAMASE, ESCHERICHIA COLI, CEPHALOTHIN, STRUCTURAL KEYWDS 2 GENOMIC, CSGID, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS KEYWDS 3 OF INFECTIOUS DISEASES, HYDROLASE, HYDROLASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK,CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 2 18-OCT-23 6WHF 1 REMARK REVDAT 1 22-APR-20 6WHF 0 JRNL AUTH C.CHANG,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK JRNL TITL CLASS C BETA-LACTAMASE FROM ESCHERICHIA COLI IN COMPLEX WITH JRNL TITL 2 CEPHALOTHIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 133136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 12903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6700 - 4.3400 0.97 8243 427 0.1464 0.1546 REMARK 3 2 4.3400 - 3.4500 0.98 8299 436 0.1508 0.1720 REMARK 3 3 3.4500 - 3.0100 0.97 8191 425 0.1721 0.1853 REMARK 3 4 3.0100 - 2.7400 0.99 8356 429 0.1749 0.1937 REMARK 3 5 2.7400 - 2.5400 0.99 8429 444 0.1756 0.1795 REMARK 3 6 2.5400 - 2.3900 0.98 8365 427 0.1645 0.1739 REMARK 3 7 2.3900 - 2.2700 0.96 8134 395 0.1682 0.1832 REMARK 3 8 2.2700 - 2.1700 0.98 8348 449 0.1614 0.1906 REMARK 3 9 2.1700 - 2.0900 0.98 8258 472 0.1635 0.1829 REMARK 3 10 2.0900 - 2.0200 0.99 8352 426 0.1636 0.1756 REMARK 3 11 2.0200 - 1.9500 0.97 8300 452 0.1626 0.1782 REMARK 3 12 1.9500 - 1.9000 0.98 8299 412 0.1612 0.1836 REMARK 3 13 1.9000 - 1.8500 0.95 7980 444 0.1629 0.2015 REMARK 3 14 1.8500 - 1.8000 0.97 8264 380 0.1596 0.1745 REMARK 3 15 1.8000 - 1.7600 0.97 8204 403 0.1588 0.1781 REMARK 3 16 1.7600 - 1.7200 0.98 8406 402 0.1513 0.1554 REMARK 3 17 1.7200 - 1.6900 0.97 8245 420 0.1574 0.1964 REMARK 3 18 1.6900 - 1.6600 0.98 8296 427 0.1558 0.1815 REMARK 3 19 1.6600 - 1.6300 0.96 8224 403 0.1577 0.2112 REMARK 3 20 1.6300 - 1.6000 0.98 8231 397 0.1590 0.1838 REMARK 3 21 1.6000 - 1.5700 0.95 8088 487 0.1581 0.1802 REMARK 3 22 1.5700 - 1.5500 0.95 8021 439 0.1667 0.2001 REMARK 3 23 1.5500 - 1.5300 0.96 8185 395 0.1627 0.1857 REMARK 3 24 1.5300 - 1.5100 0.97 8173 474 0.1695 0.1869 REMARK 3 25 1.5100 - 1.4900 0.97 8176 435 0.1759 0.2061 REMARK 3 26 1.4900 - 1.4700 0.96 8166 425 0.1839 0.1966 REMARK 3 27 1.4700 - 1.4500 0.97 8140 461 0.1917 0.2135 REMARK 3 28 1.4500 - 1.4300 0.95 8130 516 0.1979 0.2160 REMARK 3 29 1.4300 - 1.4100 0.96 8043 419 0.2002 0.2120 REMARK 3 30 1.4100 - 1.4000 0.86 7273 382 0.2168 0.2718 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.121 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.998 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 5999 REMARK 3 ANGLE : 0.870 8199 REMARK 3 CHIRALITY : 0.081 884 REMARK 3 PLANARITY : 0.006 1064 REMARK 3 DIHEDRAL : 13.974 2203 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2452 14.2937 13.7915 REMARK 3 T TENSOR REMARK 3 T11: 0.3640 T22: 0.2262 REMARK 3 T33: 0.1825 T12: 0.0840 REMARK 3 T13: -0.0962 T23: 0.0534 REMARK 3 L TENSOR REMARK 3 L11: 0.2531 L22: 0.3954 REMARK 3 L33: 0.0321 L12: 0.1750 REMARK 3 L13: -0.0012 L23: 0.0318 REMARK 3 S TENSOR REMARK 3 S11: -0.1378 S12: 0.3621 S13: 0.0988 REMARK 3 S21: -0.5175 S22: 0.0670 S23: 0.0631 REMARK 3 S31: -0.5484 S32: -0.1005 S33: -0.0136 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2491 0.6728 21.4584 REMARK 3 T TENSOR REMARK 3 T11: 0.1273 T22: 0.1775 REMARK 3 T33: 0.1328 T12: 0.0149 REMARK 3 T13: -0.0157 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: 0.2316 L22: 0.5472 REMARK 3 L33: 0.2670 L12: 0.1435 REMARK 3 L13: 0.2364 L23: 0.1637 REMARK 3 S TENSOR REMARK 3 S11: -0.0137 S12: 0.0422 S13: -0.0234 REMARK 3 S21: -0.0717 S22: -0.0462 S23: 0.1289 REMARK 3 S31: -0.0701 S32: -0.1978 S33: -0.0281 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 107 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4820 -10.8958 44.3084 REMARK 3 T TENSOR REMARK 3 T11: 0.2097 T22: 0.1155 REMARK 3 T33: 0.1339 T12: -0.0245 REMARK 3 T13: -0.0239 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.5362 L22: 0.6024 REMARK 3 L33: 0.2142 L12: -0.0073 REMARK 3 L13: 0.1594 L23: 0.0045 REMARK 3 S TENSOR REMARK 3 S11: 0.0215 S12: -0.0870 S13: -0.0893 REMARK 3 S21: 0.2215 S22: -0.0082 S23: -0.0861 REMARK 3 S31: 0.1404 S32: -0.0335 S33: -0.0041 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 190 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9379 -7.9323 27.7147 REMARK 3 T TENSOR REMARK 3 T11: 0.1097 T22: 0.1455 REMARK 3 T33: 0.1295 T12: -0.0334 REMARK 3 T13: -0.0048 T23: -0.0417 REMARK 3 L TENSOR REMARK 3 L11: 0.2790 L22: 0.4701 REMARK 3 L33: 0.7403 L12: 0.1664 REMARK 3 L13: -0.0080 L23: 0.0399 REMARK 3 S TENSOR REMARK 3 S11: 0.0107 S12: 0.0531 S13: -0.0841 REMARK 3 S21: -0.0188 S22: -0.0385 S23: 0.1290 REMARK 3 S31: 0.1690 S32: -0.1711 S33: -0.0195 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 266 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.4880 8.4601 33.8982 REMARK 3 T TENSOR REMARK 3 T11: 0.1005 T22: 0.0912 REMARK 3 T33: 0.1153 T12: 0.0012 REMARK 3 T13: -0.0025 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.4953 L22: 0.6483 REMARK 3 L33: 0.8281 L12: -0.0284 REMARK 3 L13: 0.2269 L23: 0.0237 REMARK 3 S TENSOR REMARK 3 S11: -0.0371 S12: -0.0005 S13: 0.0634 REMARK 3 S21: 0.0450 S22: -0.0541 S23: 0.0452 REMARK 3 S31: -0.0956 S32: -0.0929 S33: -0.1929 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 30 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.4825 -9.8071 4.0546 REMARK 3 T TENSOR REMARK 3 T11: 0.4579 T22: 0.1867 REMARK 3 T33: 0.2253 T12: 0.0130 REMARK 3 T13: 0.0528 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 0.1080 L22: 0.1072 REMARK 3 L33: 0.1930 L12: -0.0129 REMARK 3 L13: 0.0037 L23: -0.0839 REMARK 3 S TENSOR REMARK 3 S11: 0.0130 S12: 0.1641 S13: -0.1885 REMARK 3 S21: -0.4434 S22: -0.0522 S23: 0.0496 REMARK 3 S31: 0.5339 S32: -0.0361 S33: 0.0109 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.0905 5.2745 9.2385 REMARK 3 T TENSOR REMARK 3 T11: 0.1864 T22: 0.1499 REMARK 3 T33: 0.1376 T12: 0.0041 REMARK 3 T13: 0.0260 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 0.8260 L22: 0.5112 REMARK 3 L33: 0.3451 L12: 0.1329 REMARK 3 L13: -0.5356 L23: -0.2225 REMARK 3 S TENSOR REMARK 3 S11: 0.0158 S12: 0.0188 S13: 0.0969 REMARK 3 S21: -0.1973 S22: -0.0034 S23: -0.1407 REMARK 3 S31: 0.1053 S32: 0.0317 S33: 0.0065 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.3204 17.5109 33.4910 REMARK 3 T TENSOR REMARK 3 T11: 0.1723 T22: 0.1524 REMARK 3 T33: 0.1932 T12: -0.0407 REMARK 3 T13: 0.0334 T23: -0.0290 REMARK 3 L TENSOR REMARK 3 L11: 0.4700 L22: 0.6144 REMARK 3 L33: 0.4877 L12: -0.0694 REMARK 3 L13: -0.4909 L23: -0.0995 REMARK 3 S TENSOR REMARK 3 S11: 0.0919 S12: -0.1425 S13: 0.1766 REMARK 3 S21: 0.0973 S22: 0.0626 S23: 0.0917 REMARK 3 S31: -0.1955 S32: 0.2120 S33: 0.0527 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 190 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.8315 13.8206 16.7053 REMARK 3 T TENSOR REMARK 3 T11: 0.1412 T22: 0.1809 REMARK 3 T33: 0.2107 T12: -0.0411 REMARK 3 T13: 0.0316 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.6496 L22: 0.7307 REMARK 3 L33: 0.8475 L12: 0.0232 REMARK 3 L13: -0.6489 L23: -0.0499 REMARK 3 S TENSOR REMARK 3 S11: 0.1226 S12: -0.1112 S13: 0.2582 REMARK 3 S21: -0.2159 S22: 0.0415 S23: -0.2205 REMARK 3 S31: -0.1606 S32: 0.1647 S33: 0.0878 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 283 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.9310 -3.0737 23.3549 REMARK 3 T TENSOR REMARK 3 T11: 0.1265 T22: 0.1321 REMARK 3 T33: 0.1274 T12: 0.0065 REMARK 3 T13: 0.0044 T23: 0.0400 REMARK 3 L TENSOR REMARK 3 L11: 0.5813 L22: 0.6318 REMARK 3 L33: 0.7164 L12: 0.0019 REMARK 3 L13: -0.6134 L23: 0.1245 REMARK 3 S TENSOR REMARK 3 S11: -0.1158 S12: -0.1117 S13: -0.0840 REMARK 3 S21: -0.0551 S22: 0.0229 S23: -0.0388 REMARK 3 S31: 0.1755 S32: 0.1028 S33: -0.1246 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WHF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248207. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 133142 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.33400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 6WA7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 10% 2-PROPANOL, 20% REMARK 280 PEG4000, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 77.59250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.14900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 77.59250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.14900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 748 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 753 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 91 OAP 9EP A 506 1.98 REMARK 500 ND2 ASN B 164 O HOH B 601 2.15 REMARK 500 OD2 ASP B 114 OH TYR B 119 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 181 -62.60 -90.37 REMARK 500 VAL A 205 -61.48 -125.72 REMARK 500 TYR A 248 13.52 -160.58 REMARK 500 ASN A 368 40.81 -94.44 REMARK 500 VAL B 205 -61.31 -124.85 REMARK 500 TYR B 248 15.88 -158.76 REMARK 500 ASN B 368 39.36 -97.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9EP A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9EP B 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP97257 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 6WA7 RELATED DB: PDB DBREF 6WHF A 30 388 UNP Q104Z6 Q104Z6_ECOLX 19 377 DBREF 6WHF B 30 388 UNP Q104Z6 Q104Z6_ECOLX 19 377 SEQRES 1 A 359 ALA ALA PRO GLN GLN ILE ASN ASP ILE VAL HIS ARG THR SEQRES 2 A 359 ILE THR PRO LEU ILE GLU GLN GLN LYS ILE PRO GLY MET SEQRES 3 A 359 ALA VAL ALA VAL ILE TYR GLN GLY LYS PRO TYR TYR PHE SEQRES 4 A 359 THR TRP GLY TYR ALA ASP ILE ALA LYS LYS GLN PRO VAL SEQRES 5 A 359 THR GLN GLN THR LEU PHE GLU LEU GLY SER VAL SER LYS SEQRES 6 A 359 THR PHE THR GLY VAL LEU GLY GLY ASP ALA ILE ALA ARG SEQRES 7 A 359 GLY GLU ILE LYS LEU SER ASP PRO THR THR LYS TYR TRP SEQRES 8 A 359 PRO GLU LEU THR ALA LYS GLN TRP ASN GLY ILE THR LEU SEQRES 9 A 359 LEU HIS LEU ALA THR TYR THR ALA GLY GLY LEU PRO LEU SEQRES 10 A 359 GLN VAL PRO ASP GLU VAL LYS SER SER SER ASP LEU LEU SEQRES 11 A 359 ARG PHE TYR GLN ASN TRP GLN PRO ALA TRP ALA PRO GLY SEQRES 12 A 359 THR GLN ARG LEU TYR ALA ASN SER SER ILE GLY LEU PHE SEQRES 13 A 359 GLY ALA LEU ALA VAL LYS PRO SER GLY LEU SER PHE GLU SEQRES 14 A 359 GLN ALA MET LYS THR ARG VAL PHE GLN PRO LEU LYS LEU SEQRES 15 A 359 ASN HIS THR TRP ILE ASN VAL PRO SER ALA GLU GLU LYS SEQRES 16 A 359 ASN TYR ALA TRP GLY TYR ARG GLU GLY LYS ALA VAL HIS SEQRES 17 A 359 VAL SER PRO GLY ALA LEU ASP ALA GLU ALA TYR GLY VAL SEQRES 18 A 359 LYS SER THR ILE GLU ASP MET ALA ARG TRP VAL GLN SER SEQRES 19 A 359 ASN LEU LYS PRO LEU ASP ILE ASN GLU LYS THR LEU GLN SEQRES 20 A 359 GLN GLY ILE GLN LEU ALA GLN SER ARG TYR TRP GLN THR SEQRES 21 A 359 GLY ASP MET TYR GLN GLY LEU GLY TRP GLU MET LEU ASP SEQRES 22 A 359 TRP PRO VAL ASN PRO ASP ILE ILE ILE ASN GLY SER ASP SEQRES 23 A 359 ASN LYS ILE ALA LEU ALA ALA ARG PRO VAL LYS PRO ILE SEQRES 24 A 359 THR PRO PRO THR PRO ALA VAL ARG ALA SER TRP VAL HIS SEQRES 25 A 359 LYS THR GLY ALA THR GLY GLY PHE GLY SER TYR VAL ALA SEQRES 26 A 359 PHE ILE PRO GLU LYS GLU LEU GLY ILE VAL MET LEU ALA SEQRES 27 A 359 ASN LYS ASN TYR PRO ASN PRO ALA ARG VAL ALA ALA ALA SEQRES 28 A 359 TRP GLN ILE LEU ASN ALA LEU GLN SEQRES 1 B 359 ALA ALA PRO GLN GLN ILE ASN ASP ILE VAL HIS ARG THR SEQRES 2 B 359 ILE THR PRO LEU ILE GLU GLN GLN LYS ILE PRO GLY MET SEQRES 3 B 359 ALA VAL ALA VAL ILE TYR GLN GLY LYS PRO TYR TYR PHE SEQRES 4 B 359 THR TRP GLY TYR ALA ASP ILE ALA LYS LYS GLN PRO VAL SEQRES 5 B 359 THR GLN GLN THR LEU PHE GLU LEU GLY SER VAL SER LYS SEQRES 6 B 359 THR PHE THR GLY VAL LEU GLY GLY ASP ALA ILE ALA ARG SEQRES 7 B 359 GLY GLU ILE LYS LEU SER ASP PRO THR THR LYS TYR TRP SEQRES 8 B 359 PRO GLU LEU THR ALA LYS GLN TRP ASN GLY ILE THR LEU SEQRES 9 B 359 LEU HIS LEU ALA THR TYR THR ALA GLY GLY LEU PRO LEU SEQRES 10 B 359 GLN VAL PRO ASP GLU VAL LYS SER SER SER ASP LEU LEU SEQRES 11 B 359 ARG PHE TYR GLN ASN TRP GLN PRO ALA TRP ALA PRO GLY SEQRES 12 B 359 THR GLN ARG LEU TYR ALA ASN SER SER ILE GLY LEU PHE SEQRES 13 B 359 GLY ALA LEU ALA VAL LYS PRO SER GLY LEU SER PHE GLU SEQRES 14 B 359 GLN ALA MET LYS THR ARG VAL PHE GLN PRO LEU LYS LEU SEQRES 15 B 359 ASN HIS THR TRP ILE ASN VAL PRO SER ALA GLU GLU LYS SEQRES 16 B 359 ASN TYR ALA TRP GLY TYR ARG GLU GLY LYS ALA VAL HIS SEQRES 17 B 359 VAL SER PRO GLY ALA LEU ASP ALA GLU ALA TYR GLY VAL SEQRES 18 B 359 LYS SER THR ILE GLU ASP MET ALA ARG TRP VAL GLN SER SEQRES 19 B 359 ASN LEU LYS PRO LEU ASP ILE ASN GLU LYS THR LEU GLN SEQRES 20 B 359 GLN GLY ILE GLN LEU ALA GLN SER ARG TYR TRP GLN THR SEQRES 21 B 359 GLY ASP MET TYR GLN GLY LEU GLY TRP GLU MET LEU ASP SEQRES 22 B 359 TRP PRO VAL ASN PRO ASP ILE ILE ILE ASN GLY SER ASP SEQRES 23 B 359 ASN LYS ILE ALA LEU ALA ALA ARG PRO VAL LYS PRO ILE SEQRES 24 B 359 THR PRO PRO THR PRO ALA VAL ARG ALA SER TRP VAL HIS SEQRES 25 B 359 LYS THR GLY ALA THR GLY GLY PHE GLY SER TYR VAL ALA SEQRES 26 B 359 PHE ILE PRO GLU LYS GLU LEU GLY ILE VAL MET LEU ALA SEQRES 27 B 359 ASN LYS ASN TYR PRO ASN PRO ALA ARG VAL ALA ALA ALA SEQRES 28 B 359 TRP GLN ILE LEU ASN ALA LEU GLN HET EDO A 501 4 HET EDO A 502 4 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET 9EP A 506 26 HET EDO B 501 4 HET EDO B 502 4 HET EDO B 503 4 HET EDO B 504 4 HET 9EP B 505 26 HETNAM EDO 1,2-ETHANEDIOL HETNAM 9EP (2R)-5-[(ACETYLOXY)METHYL]-2-{(1R)-2-OXO-1-[(THIOPHEN- HETNAM 2 9EP 2-YLACETYL)AMINO]ETHYL}-3,6-DIHYDRO-2H-1,3-THIAZINE-4- HETNAM 3 9EP CARBOXYLIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN 9EP CEPHALOTIN, BOUND FORM FORMUL 3 EDO 9(C2 H6 O2) FORMUL 8 9EP 2(C16 H18 N2 O6 S2) FORMUL 14 HOH *425(H2 O) HELIX 1 AA1 PRO A 32 LYS A 51 1 20 HELIX 2 AA2 VAL A 92 ARG A 107 1 16 HELIX 3 AA3 PRO A 115 TRP A 120 1 6 HELIX 4 AA4 ALA A 125 ASN A 129 5 5 HELIX 5 AA5 THR A 132 THR A 138 1 7 HELIX 6 AA6 SER A 154 TRP A 165 1 12 HELIX 7 AA7 ALA A 178 VAL A 190 1 13 HELIX 8 AA8 SER A 196 VAL A 205 1 10 HELIX 9 AA9 PRO A 219 TYR A 226 5 8 HELIX 10 AB1 LEU A 243 TYR A 248 1 6 HELIX 11 AB2 THR A 253 LYS A 266 1 14 HELIX 12 AB3 PRO A 267 ILE A 270 5 4 HELIX 13 AB4 GLU A 272 GLN A 283 1 12 HELIX 14 AB5 ASN A 306 ASP A 315 1 10 HELIX 15 AB6 ASP A 315 LEU A 320 1 6 HELIX 16 AB7 PRO A 357 GLU A 360 5 4 HELIX 17 AB8 PRO A 372 GLN A 388 1 17 HELIX 18 AB9 PRO B 32 LYS B 51 1 20 HELIX 19 AC1 VAL B 92 ARG B 107 1 16 HELIX 20 AC2 PRO B 115 TYR B 119 5 5 HELIX 21 AC3 ALA B 125 ASN B 129 5 5 HELIX 22 AC4 THR B 132 THR B 138 1 7 HELIX 23 AC5 SER B 154 TRP B 165 1 12 HELIX 24 AC6 ALA B 178 VAL B 190 1 13 HELIX 25 AC7 LYS B 191 GLY B 194 5 4 HELIX 26 AC8 SER B 196 VAL B 205 1 10 HELIX 27 AC9 PRO B 219 TYR B 226 5 8 HELIX 28 AD1 LEU B 243 TYR B 248 1 6 HELIX 29 AD2 THR B 253 LYS B 266 1 14 HELIX 30 AD3 PRO B 267 ILE B 270 5 4 HELIX 31 AD4 GLU B 272 GLN B 283 1 12 HELIX 32 AD5 ASN B 306 SER B 314 1 9 HELIX 33 AD6 ASP B 315 LEU B 320 1 6 HELIX 34 AD7 PRO B 357 GLU B 360 5 4 HELIX 35 AD8 PRO B 372 GLN B 388 1 17 SHEET 1 AA110 GLN A 79 PRO A 80 0 SHEET 2 AA110 LYS A 64 ASP A 74 -1 N ALA A 73 O GLN A 79 SHEET 3 AA110 GLY A 54 TYR A 61 -1 N TYR A 61 O LYS A 64 SHEET 4 AA110 LEU A 361 ALA A 367 -1 O LEU A 366 N ALA A 56 SHEET 5 AA110 GLY A 350 ILE A 356 -1 N ILE A 356 O LEU A 361 SHEET 6 AA110 SER A 338 ALA A 345 -1 N GLY A 344 O SER A 351 SHEET 7 AA110 GLU A 299 ASP A 302 -1 N LEU A 301 O TRP A 339 SHEET 8 AA110 MET A 292 GLN A 294 -1 N TYR A 293 O MET A 300 SHEET 9 AA110 ARG A 285 THR A 289 -1 N THR A 289 O MET A 292 SHEET 10 AA110 LYS A 326 THR A 332 -1 O LYS A 326 N GLN A 288 SHEET 1 AA2 3 PHE A 87 GLU A 88 0 SHEET 2 AA2 3 LYS A 251 SER A 252 -1 O SER A 252 N PHE A 87 SHEET 3 AA2 3 THR A 214 TRP A 215 -1 N TRP A 215 O LYS A 251 SHEET 1 AA3 2 GLN A 174 ARG A 175 0 SHEET 2 AA3 2 ARG A 323 PRO A 324 -1 O ARG A 323 N ARG A 175 SHEET 1 AA4 2 GLY A 229 ARG A 231 0 SHEET 2 AA4 2 LYS A 234 VAL A 236 -1 O VAL A 236 N GLY A 229 SHEET 1 AA510 GLN B 79 PRO B 80 0 SHEET 2 AA510 LYS B 64 ASP B 74 -1 N ALA B 73 O GLN B 79 SHEET 3 AA510 GLY B 54 TYR B 61 -1 N VAL B 57 O PHE B 68 SHEET 4 AA510 LEU B 361 ALA B 367 -1 O LEU B 366 N ALA B 56 SHEET 5 AA510 PHE B 349 ILE B 356 -1 N ILE B 356 O LEU B 361 SHEET 6 AA510 SER B 338 THR B 346 -1 N GLY B 344 O SER B 351 SHEET 7 AA510 GLU B 299 ASP B 302 -1 N LEU B 301 O TRP B 339 SHEET 8 AA510 MET B 292 GLN B 294 -1 N TYR B 293 O MET B 300 SHEET 9 AA510 ARG B 285 THR B 289 -1 N TYR B 286 O GLN B 294 SHEET 10 AA510 LYS B 326 THR B 332 -1 O LYS B 326 N GLN B 288 SHEET 1 AA6 3 PHE B 87 GLU B 88 0 SHEET 2 AA6 3 LYS B 251 SER B 252 -1 O SER B 252 N PHE B 87 SHEET 3 AA6 3 THR B 214 TRP B 215 -1 N TRP B 215 O LYS B 251 SHEET 1 AA7 2 GLN B 174 ARG B 175 0 SHEET 2 AA7 2 ARG B 323 PRO B 324 -1 O ARG B 323 N ARG B 175 SHEET 1 AA8 2 GLY B 229 ARG B 231 0 SHEET 2 AA8 2 LYS B 234 VAL B 236 -1 O VAL B 236 N GLY B 229 LINK OG SER A 91 CAO 9EP A 506 1555 1555 1.39 CISPEP 1 TRP A 303 PRO A 304 0 4.39 CISPEP 2 THR A 329 PRO A 330 0 -3.71 CISPEP 3 TRP B 303 PRO B 304 0 3.60 CISPEP 4 THR B 329 PRO B 330 0 -2.54 SITE 1 AC1 8 GLU A 299 SER A 314 HIS A 341 LYS A 342 SITE 2 AC1 8 THR A 343 HOH A 629 HOH A 632 HOH A 642 SITE 1 AC2 3 THR A 69 EDO A 503 HOH A 620 SITE 1 AC3 3 PHE A 68 THR A 69 EDO A 502 SITE 1 AC4 6 LYS A 153 PRO A 240 GLY A 241 ALA A 242 SITE 2 AC4 6 HOH A 686 HOH A 715 SITE 1 AC5 4 ARG A 107 THR A 203 GLU A 272 HOH A 639 SITE 1 AC6 12 SER A 91 GLN A 147 ASN A 179 TYR A 248 SITE 2 AC6 12 ASN A 316 GLY A 344 ALA A 345 THR A 346 SITE 3 AC6 12 GLY A 347 ASN A 370 HOH A 704 HOH A 723 SITE 1 AC7 1 HIS B 237 SITE 1 AC8 7 GLU B 299 HIS B 341 LYS B 342 THR B 343 SITE 2 AC8 7 HOH B 626 HOH B 641 HOH B 644 SITE 1 AC9 4 ILE B 311 PRO B 374 ALA B 375 HOH B 744 SITE 1 AD1 7 GLY B 108 GLU B 109 ILE B 110 LYS B 111 SITE 2 AD1 7 ASP B 114 LYS B 118 TYR B 119 SITE 1 AD2 10 SER B 91 GLN B 147 ASN B 179 TYR B 248 SITE 2 AD2 10 ASN B 316 GLY B 344 ALA B 345 GLY B 347 SITE 3 AD2 10 ASN B 370 HOH B 730 CRYST1 155.185 46.298 108.854 90.00 116.58 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006444 0.000000 0.003224 0.00000 SCALE2 0.000000 0.021599 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010272 0.00000