HEADER LIGASE 13-APR-20 6WJH TITLE CRYSTAL STRUCTURE OF MAGE-A11 BOUND TO THE PCF11 DEGRON COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUSION PROTEIN OF PCF11 AND MAGE-A11; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PRE-MRNA CLEAVAGE COMPLEX II PROTEIN PCF11,CANCER/TESTIS COMPND 5 ANTIGEN 1.11,CT1.11,MAGE-11 ANTIGEN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PCF11, KIAA0824, MAGEA11, MAGE11; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MAGE-A11, PCF 11, UBIQUITIN LIGASE, PROTEIN COMPLEX, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR D.J.MILLER,X.HUANG REVDAT 2 18-OCT-23 6WJH 1 REMARK REVDAT 1 14-OCT-20 6WJH 0 JRNL AUTH S.W.YANG,X.HUANG,W.LIN,J.MIN,D.J.MILLER,A.MAYASUNDARI, JRNL AUTH 2 P.RODRIGUES,E.C.GRIFFITH,C.T.GEE,L.LI,W.LI,R.E.LEE, JRNL AUTH 3 Z.RANKOVIC,T.CHEN,P.R.POTTS JRNL TITL STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION AND CHEMICAL JRNL TITL 2 INHIBITION OF ONCOGENIC MAGE UBIQUITIN LIGASES. JRNL REF NAT COMMUN V. 11 4931 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 33004795 JRNL DOI 10.1038/S41467-020-18708-X REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 53723 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2846 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.19 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3009 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2500 REMARK 3 BIN FREE R VALUE SET COUNT : 156 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7095 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 208 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 0.48000 REMARK 3 B12 (A**2) : -0.57000 REMARK 3 B13 (A**2) : -0.25000 REMARK 3 B23 (A**2) : 1.01000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.254 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.206 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.157 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.162 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7258 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6802 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9831 ; 1.480 ; 1.636 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15735 ; 1.443 ; 1.569 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 869 ; 6.337 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 368 ;35.910 ;22.500 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1256 ;14.851 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;15.601 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 913 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7953 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1529 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6WJH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248238. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56569 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 38.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 2.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12000 REMARK 200 FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.37200 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4V0P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THE WELL SOLUTION CONTAINED 0.2 M NA REMARK 280 ACETATE, 0.1 M BIS TRIS PROPANE PH 7.5 AND 20% (W/V) PEG 3350. REMARK 280 THE DROP CONTAINED A 1:1 VOLUME RATIO OF WELL SOLUTION TO REMARK 280 PROTEIN (15 MG/ML IN 50 MM TRIS, PH 7.4, 200 MM NACL AND 5 MM REMARK 280 DTT)., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 677 REMARK 465 THR A 678 REMARK 465 GLN A 679 REMARK 465 GLY A 698 REMARK 465 VAL A 699 REMARK 465 ARG A 700 REMARK 465 GLU A 701 REMARK 465 GLY A 702 REMARK 465 GLY A 703 REMARK 465 SER A 704 REMARK 465 GLY A 705 REMARK 465 GLU A 1425 REMARK 465 GLY A 1426 REMARK 465 GLU A 1427 REMARK 465 GLY A 1428 REMARK 465 VAL A 1429 REMARK 465 ILE B 677 REMARK 465 THR B 678 REMARK 465 GLN B 679 REMARK 465 GLY B 698 REMARK 465 VAL B 699 REMARK 465 ARG B 700 REMARK 465 GLU B 701 REMARK 465 GLY B 702 REMARK 465 GLY B 703 REMARK 465 SER B 704 REMARK 465 GLY B 705 REMARK 465 ARG B 706 REMARK 465 CYS B 1304 REMARK 465 ASN B 1305 REMARK 465 GLU B 1424 REMARK 465 GLU B 1425 REMARK 465 GLY B 1426 REMARK 465 GLU B 1427 REMARK 465 GLY B 1428 REMARK 465 VAL B 1429 REMARK 465 ILE C 677 REMARK 465 THR C 678 REMARK 465 GLN C 679 REMARK 465 GLU C 697 REMARK 465 GLY C 698 REMARK 465 VAL C 699 REMARK 465 ARG C 700 REMARK 465 GLU C 701 REMARK 465 GLY C 702 REMARK 465 GLY C 703 REMARK 465 SER C 704 REMARK 465 GLY C 705 REMARK 465 ARG C 706 REMARK 465 PRO C 707 REMARK 465 SER C 1218 REMARK 465 GLN C 1219 REMARK 465 ASP C 1220 REMARK 465 CYS C 1304 REMARK 465 ASN C 1305 REMARK 465 GLU C 1306 REMARK 465 GLN C 1307 REMARK 465 PRO C 1375 REMARK 465 GLY C 1376 REMARK 465 THR C 1377 REMARK 465 ASP C 1378 REMARK 465 PRO C 1379 REMARK 465 GLU C 1427 REMARK 465 GLY C 1428 REMARK 465 VAL C 1429 REMARK 465 ILE D 677 REMARK 465 THR D 678 REMARK 465 GLN D 679 REMARK 465 GLU D 701 REMARK 465 GLY D 702 REMARK 465 GLY D 703 REMARK 465 SER D 704 REMARK 465 GLY D 705 REMARK 465 ARG D 706 REMARK 465 PRO D 707 REMARK 465 SER D 1218 REMARK 465 GLN D 1219 REMARK 465 ASP D 1220 REMARK 465 ILE D 1221 REMARK 465 GLN D 1303 REMARK 465 CYS D 1304 REMARK 465 ASN D 1305 REMARK 465 GLU D 1306 REMARK 465 GLN D 1307 REMARK 465 GLY D 1376 REMARK 465 THR D 1377 REMARK 465 ASP D 1378 REMARK 465 GLU D 1427 REMARK 465 GLY D 1428 REMARK 465 VAL D 1429 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 706 CG CD NE CZ NH1 NH2 REMARK 470 SER A1218 OG REMARK 470 GLN A1219 CG CD OE1 NE2 REMARK 470 CYS A1304 SG REMARK 470 GLU A1306 CG CD OE1 OE2 REMARK 470 GLN A1307 CG CD OE1 NE2 REMARK 470 GLU A1336 CG CD OE1 OE2 REMARK 470 ARG A1347 CG CD NE CZ NH1 NH2 REMARK 470 ASP A1378 CG OD1 OD2 REMARK 470 ASP B 680 CG OD1 OD2 REMARK 470 GLU B 697 CG CD OE1 OE2 REMARK 470 SER B1218 OG REMARK 470 GLN B1219 CG CD OE1 NE2 REMARK 470 GLU B1306 CG CD OE1 OE2 REMARK 470 GLN B1307 CG CD OE1 NE2 REMARK 470 ASP B1378 CG OD1 OD2 REMARK 470 ASP C 680 CG OD1 OD2 REMARK 470 ILE C1221 CG1 CG2 CD1 REMARK 470 ARG C1423 CG CD NE CZ NH1 NH2 REMARK 470 ASP D 680 CG OD1 OD2 REMARK 470 VAL D 699 CG1 CG2 REMARK 470 ARG D 700 CG CD NE CZ NH1 NH2 REMARK 470 LYS D1254 CG CD CE NZ REMARK 470 GLN D1373 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A1252 -57.79 -129.27 REMARK 500 LYS A1254 -107.74 49.71 REMARK 500 LEU A1295 24.74 48.22 REMARK 500 GLN A1361 -72.55 -128.77 REMARK 500 ASP A1378 107.14 -162.97 REMARK 500 SER A1413 3.36 -69.96 REMARK 500 TYR A1414 69.74 -118.49 REMARK 500 LYS B1240 27.55 49.21 REMARK 500 VAL B1252 -60.59 -130.49 REMARK 500 LYS B1254 -115.63 39.71 REMARK 500 LEU B1295 17.84 57.25 REMARK 500 SER B1308 129.67 -38.30 REMARK 500 ASN B1327 7.87 81.06 REMARK 500 GLN B1361 -70.08 -118.31 REMARK 500 TYR B1414 71.95 -115.33 REMARK 500 SER C1251 -91.81 -125.20 REMARK 500 ASN C1255 -2.33 84.42 REMARK 500 HIS C1287 65.93 60.07 REMARK 500 ASN C1327 11.25 80.20 REMARK 500 TYR C1414 69.00 -114.04 REMARK 500 SER D1251 -95.32 -113.66 REMARK 500 ASN D1255 4.33 80.94 REMARK 500 ASN D1327 11.30 80.45 REMARK 500 GLN D1361 -68.15 -121.87 REMARK 500 LYS D1367 16.89 80.62 REMARK 500 TYR D1414 79.24 -113.94 REMARK 500 REMARK 500 REMARK: NULL DBREF 6WJH A 677 701 UNP O94913 PCF11_HUMAN 677 701 DBREF 6WJH A 1218 1429 UNP P43364 MAGAB_HUMAN 218 429 DBREF 6WJH B 677 701 UNP O94913 PCF11_HUMAN 677 701 DBREF 6WJH B 1218 1429 UNP P43364 MAGAB_HUMAN 218 429 DBREF 6WJH C 677 701 UNP O94913 PCF11_HUMAN 677 701 DBREF 6WJH C 1218 1429 UNP P43364 MAGAB_HUMAN 218 429 DBREF 6WJH D 677 701 UNP O94913 PCF11_HUMAN 677 701 DBREF 6WJH D 1218 1429 UNP P43364 MAGAB_HUMAN 218 429 SEQADV 6WJH GLY A 702 UNP O94913 LINKER SEQADV 6WJH GLY A 703 UNP O94913 LINKER SEQADV 6WJH SER A 704 UNP O94913 LINKER SEQADV 6WJH GLY A 705 UNP O94913 LINKER SEQADV 6WJH ARG A 706 UNP O94913 LINKER SEQADV 6WJH PRO A 707 UNP O94913 LINKER SEQADV 6WJH GLY B 702 UNP O94913 LINKER SEQADV 6WJH GLY B 703 UNP O94913 LINKER SEQADV 6WJH SER B 704 UNP O94913 LINKER SEQADV 6WJH GLY B 705 UNP O94913 LINKER SEQADV 6WJH ARG B 706 UNP O94913 LINKER SEQADV 6WJH PRO B 707 UNP O94913 LINKER SEQADV 6WJH GLY C 702 UNP O94913 LINKER SEQADV 6WJH GLY C 703 UNP O94913 LINKER SEQADV 6WJH SER C 704 UNP O94913 LINKER SEQADV 6WJH GLY C 705 UNP O94913 LINKER SEQADV 6WJH ARG C 706 UNP O94913 LINKER SEQADV 6WJH PRO C 707 UNP O94913 LINKER SEQADV 6WJH GLY D 702 UNP O94913 LINKER SEQADV 6WJH GLY D 703 UNP O94913 LINKER SEQADV 6WJH SER D 704 UNP O94913 LINKER SEQADV 6WJH GLY D 705 UNP O94913 LINKER SEQADV 6WJH ARG D 706 UNP O94913 LINKER SEQADV 6WJH PRO D 707 UNP O94913 LINKER SEQRES 1 A 243 ILE THR GLN ASP ASP PHE LEU VAL VAL VAL HIS GLN ILE SEQRES 2 A 243 ARG GLN LEU PHE GLN TYR GLN GLU GLY VAL ARG GLU GLY SEQRES 3 A 243 GLY SER GLY ARG PRO SER GLN ASP ILE LEU HIS ASP LYS SEQRES 4 A 243 ILE ILE ASP LEU VAL HIS LEU LEU LEU ARG LYS TYR ARG SEQRES 5 A 243 VAL LYS GLY LEU ILE THR LYS ALA GLU MET LEU GLY SER SEQRES 6 A 243 VAL ILE LYS ASN TYR GLU ASP TYR PHE PRO GLU ILE PHE SEQRES 7 A 243 ARG GLU ALA SER VAL CYS MET GLN LEU LEU PHE GLY ILE SEQRES 8 A 243 ASP VAL LYS GLU VAL ASP PRO THR SER HIS SER TYR VAL SEQRES 9 A 243 LEU VAL THR SER LEU ASN LEU SER TYR ASP GLY ILE GLN SEQRES 10 A 243 CYS ASN GLU GLN SER MET PRO LYS SER GLY LEU LEU ILE SEQRES 11 A 243 ILE VAL LEU GLY VAL ILE PHE MET GLU GLY ASN CYS ILE SEQRES 12 A 243 PRO GLU GLU VAL MET TRP GLU VAL LEU SER ILE MET GLY SEQRES 13 A 243 VAL TYR ALA GLY ARG GLU HIS PHE LEU PHE GLY GLU PRO SEQRES 14 A 243 LYS ARG LEU LEU THR GLN ASN TRP VAL GLN GLU LYS TYR SEQRES 15 A 243 LEU VAL TYR ARG GLN VAL PRO GLY THR ASP PRO ALA CYS SEQRES 16 A 243 TYR GLU PHE LEU TRP GLY PRO ARG ALA HIS ALA GLU THR SEQRES 17 A 243 SER LYS MET LYS VAL LEU GLU TYR ILE ALA ASN ALA ASN SEQRES 18 A 243 GLY ARG ASP PRO THR SER TYR PRO SER LEU TYR GLU ASP SEQRES 19 A 243 ALA LEU ARG GLU GLU GLY GLU GLY VAL SEQRES 1 B 243 ILE THR GLN ASP ASP PHE LEU VAL VAL VAL HIS GLN ILE SEQRES 2 B 243 ARG GLN LEU PHE GLN TYR GLN GLU GLY VAL ARG GLU GLY SEQRES 3 B 243 GLY SER GLY ARG PRO SER GLN ASP ILE LEU HIS ASP LYS SEQRES 4 B 243 ILE ILE ASP LEU VAL HIS LEU LEU LEU ARG LYS TYR ARG SEQRES 5 B 243 VAL LYS GLY LEU ILE THR LYS ALA GLU MET LEU GLY SER SEQRES 6 B 243 VAL ILE LYS ASN TYR GLU ASP TYR PHE PRO GLU ILE PHE SEQRES 7 B 243 ARG GLU ALA SER VAL CYS MET GLN LEU LEU PHE GLY ILE SEQRES 8 B 243 ASP VAL LYS GLU VAL ASP PRO THR SER HIS SER TYR VAL SEQRES 9 B 243 LEU VAL THR SER LEU ASN LEU SER TYR ASP GLY ILE GLN SEQRES 10 B 243 CYS ASN GLU GLN SER MET PRO LYS SER GLY LEU LEU ILE SEQRES 11 B 243 ILE VAL LEU GLY VAL ILE PHE MET GLU GLY ASN CYS ILE SEQRES 12 B 243 PRO GLU GLU VAL MET TRP GLU VAL LEU SER ILE MET GLY SEQRES 13 B 243 VAL TYR ALA GLY ARG GLU HIS PHE LEU PHE GLY GLU PRO SEQRES 14 B 243 LYS ARG LEU LEU THR GLN ASN TRP VAL GLN GLU LYS TYR SEQRES 15 B 243 LEU VAL TYR ARG GLN VAL PRO GLY THR ASP PRO ALA CYS SEQRES 16 B 243 TYR GLU PHE LEU TRP GLY PRO ARG ALA HIS ALA GLU THR SEQRES 17 B 243 SER LYS MET LYS VAL LEU GLU TYR ILE ALA ASN ALA ASN SEQRES 18 B 243 GLY ARG ASP PRO THR SER TYR PRO SER LEU TYR GLU ASP SEQRES 19 B 243 ALA LEU ARG GLU GLU GLY GLU GLY VAL SEQRES 1 C 243 ILE THR GLN ASP ASP PHE LEU VAL VAL VAL HIS GLN ILE SEQRES 2 C 243 ARG GLN LEU PHE GLN TYR GLN GLU GLY VAL ARG GLU GLY SEQRES 3 C 243 GLY SER GLY ARG PRO SER GLN ASP ILE LEU HIS ASP LYS SEQRES 4 C 243 ILE ILE ASP LEU VAL HIS LEU LEU LEU ARG LYS TYR ARG SEQRES 5 C 243 VAL LYS GLY LEU ILE THR LYS ALA GLU MET LEU GLY SER SEQRES 6 C 243 VAL ILE LYS ASN TYR GLU ASP TYR PHE PRO GLU ILE PHE SEQRES 7 C 243 ARG GLU ALA SER VAL CYS MET GLN LEU LEU PHE GLY ILE SEQRES 8 C 243 ASP VAL LYS GLU VAL ASP PRO THR SER HIS SER TYR VAL SEQRES 9 C 243 LEU VAL THR SER LEU ASN LEU SER TYR ASP GLY ILE GLN SEQRES 10 C 243 CYS ASN GLU GLN SER MET PRO LYS SER GLY LEU LEU ILE SEQRES 11 C 243 ILE VAL LEU GLY VAL ILE PHE MET GLU GLY ASN CYS ILE SEQRES 12 C 243 PRO GLU GLU VAL MET TRP GLU VAL LEU SER ILE MET GLY SEQRES 13 C 243 VAL TYR ALA GLY ARG GLU HIS PHE LEU PHE GLY GLU PRO SEQRES 14 C 243 LYS ARG LEU LEU THR GLN ASN TRP VAL GLN GLU LYS TYR SEQRES 15 C 243 LEU VAL TYR ARG GLN VAL PRO GLY THR ASP PRO ALA CYS SEQRES 16 C 243 TYR GLU PHE LEU TRP GLY PRO ARG ALA HIS ALA GLU THR SEQRES 17 C 243 SER LYS MET LYS VAL LEU GLU TYR ILE ALA ASN ALA ASN SEQRES 18 C 243 GLY ARG ASP PRO THR SER TYR PRO SER LEU TYR GLU ASP SEQRES 19 C 243 ALA LEU ARG GLU GLU GLY GLU GLY VAL SEQRES 1 D 243 ILE THR GLN ASP ASP PHE LEU VAL VAL VAL HIS GLN ILE SEQRES 2 D 243 ARG GLN LEU PHE GLN TYR GLN GLU GLY VAL ARG GLU GLY SEQRES 3 D 243 GLY SER GLY ARG PRO SER GLN ASP ILE LEU HIS ASP LYS SEQRES 4 D 243 ILE ILE ASP LEU VAL HIS LEU LEU LEU ARG LYS TYR ARG SEQRES 5 D 243 VAL LYS GLY LEU ILE THR LYS ALA GLU MET LEU GLY SER SEQRES 6 D 243 VAL ILE LYS ASN TYR GLU ASP TYR PHE PRO GLU ILE PHE SEQRES 7 D 243 ARG GLU ALA SER VAL CYS MET GLN LEU LEU PHE GLY ILE SEQRES 8 D 243 ASP VAL LYS GLU VAL ASP PRO THR SER HIS SER TYR VAL SEQRES 9 D 243 LEU VAL THR SER LEU ASN LEU SER TYR ASP GLY ILE GLN SEQRES 10 D 243 CYS ASN GLU GLN SER MET PRO LYS SER GLY LEU LEU ILE SEQRES 11 D 243 ILE VAL LEU GLY VAL ILE PHE MET GLU GLY ASN CYS ILE SEQRES 12 D 243 PRO GLU GLU VAL MET TRP GLU VAL LEU SER ILE MET GLY SEQRES 13 D 243 VAL TYR ALA GLY ARG GLU HIS PHE LEU PHE GLY GLU PRO SEQRES 14 D 243 LYS ARG LEU LEU THR GLN ASN TRP VAL GLN GLU LYS TYR SEQRES 15 D 243 LEU VAL TYR ARG GLN VAL PRO GLY THR ASP PRO ALA CYS SEQRES 16 D 243 TYR GLU PHE LEU TRP GLY PRO ARG ALA HIS ALA GLU THR SEQRES 17 D 243 SER LYS MET LYS VAL LEU GLU TYR ILE ALA ASN ALA ASN SEQRES 18 D 243 GLY ARG ASP PRO THR SER TYR PRO SER LEU TYR GLU ASP SEQRES 19 D 243 ALA LEU ARG GLU GLU GLY GLU GLY VAL FORMUL 5 HOH *208(H2 O) HELIX 1 AA1 ASP A 681 GLN A 694 1 14 HELIX 2 AA2 ASP A 1220 VAL A 1239 1 20 HELIX 3 AA3 LYS A 1245 VAL A 1252 1 8 HELIX 4 AA4 ILE A 1253 ASP A 1258 5 6 HELIX 5 AA5 TYR A 1259 GLY A 1276 1 18 HELIX 6 AA6 LEU A 1295 LEU A 1297 5 3 HELIX 7 AA7 LYS A 1311 GLU A 1325 1 15 HELIX 8 AA8 GLU A 1331 SER A 1339 1 9 HELIX 9 AA9 ILE A 1340 GLY A 1342 5 3 HELIX 10 AB1 GLU A 1354 GLN A 1361 1 8 HELIX 11 AB2 GLN A 1361 GLU A 1366 1 6 HELIX 12 AB3 GLY A 1387 THR A 1394 1 8 HELIX 13 AB4 SER A 1395 ASN A 1407 1 13 HELIX 14 AB5 ASP A 1410 SER A 1413 5 4 HELIX 15 AB6 TYR A 1414 ARG A 1423 1 10 HELIX 16 AB7 ASP B 681 PHE B 693 1 13 HELIX 17 AB8 ASP B 1220 VAL B 1239 1 20 HELIX 18 AB9 LYS B 1245 VAL B 1252 1 8 HELIX 19 AC1 ILE B 1253 ASP B 1258 5 6 HELIX 20 AC2 TYR B 1259 GLY B 1276 1 18 HELIX 21 AC3 LEU B 1295 LEU B 1297 5 3 HELIX 22 AC4 LYS B 1311 GLU B 1325 1 15 HELIX 23 AC5 GLU B 1331 SER B 1339 1 9 HELIX 24 AC6 ILE B 1340 GLY B 1342 5 3 HELIX 25 AC7 GLU B 1354 GLN B 1361 1 8 HELIX 26 AC8 GLN B 1361 GLU B 1366 1 6 HELIX 27 AC9 GLY B 1387 THR B 1394 1 8 HELIX 28 AD1 SER B 1395 ALA B 1406 1 12 HELIX 29 AD2 ASP B 1410 SER B 1413 5 4 HELIX 30 AD3 TYR B 1414 ARG B 1423 1 10 HELIX 31 AD4 ASP C 681 PHE C 693 1 13 HELIX 32 AD5 LEU C 1222 VAL C 1239 1 18 HELIX 33 AD6 LYS C 1245 SER C 1251 1 7 HELIX 34 AD7 TYR C 1256 ASP C 1258 5 3 HELIX 35 AD8 TYR C 1259 GLY C 1276 1 18 HELIX 36 AD9 LEU C 1295 LEU C 1297 5 3 HELIX 37 AE1 LYS C 1311 GLU C 1325 1 15 HELIX 38 AE2 GLU C 1331 ILE C 1340 1 10 HELIX 39 AE3 GLU C 1354 GLN C 1361 1 8 HELIX 40 AE4 GLN C 1361 GLU C 1366 1 6 HELIX 41 AE5 GLY C 1387 THR C 1394 1 8 HELIX 42 AE6 SER C 1395 ASN C 1407 1 13 HELIX 43 AE7 ASP C 1410 SER C 1413 5 4 HELIX 44 AE8 TYR C 1414 GLY C 1426 1 13 HELIX 45 AE9 ASP D 681 PHE D 693 1 13 HELIX 46 AF1 HIS D 1223 VAL D 1239 1 17 HELIX 47 AF2 LYS D 1245 SER D 1251 1 7 HELIX 48 AF3 TYR D 1256 ASP D 1258 5 3 HELIX 49 AF4 TYR D 1259 GLY D 1276 1 18 HELIX 50 AF5 LEU D 1295 LEU D 1297 5 3 HELIX 51 AF6 LYS D 1311 GLU D 1325 1 15 HELIX 52 AF7 GLU D 1331 ILE D 1340 1 10 HELIX 53 AF8 GLU D 1354 GLN D 1361 1 8 HELIX 54 AF9 GLN D 1361 GLU D 1366 1 6 HELIX 55 AG1 GLY D 1387 THR D 1394 1 8 HELIX 56 AG2 SER D 1395 ASN D 1407 1 13 HELIX 57 AG3 ASP D 1410 SER D 1413 5 4 HELIX 58 AG4 TYR D 1414 GLY D 1426 1 13 SHEET 1 AA1 3 ILE A1243 THR A1244 0 SHEET 2 AA1 3 SER A1288 THR A1293 -1 O TYR A1289 N ILE A1243 SHEET 3 AA1 3 ILE A1277 ASP A1283 -1 N ASP A1278 O VAL A1292 SHEET 1 AA2 3 ILE A1329 PRO A1330 0 SHEET 2 AA2 3 TYR A1382 TRP A1386 -1 O PHE A1384 N ILE A1329 SHEET 3 AA2 3 LEU A1369 GLN A1373 -1 N VAL A1370 O LEU A1385 SHEET 1 AA3 3 ILE B1243 THR B1244 0 SHEET 2 AA3 3 SER B1288 THR B1293 -1 O TYR B1289 N ILE B1243 SHEET 3 AA3 3 ILE B1277 ASP B1283 -1 N ASP B1278 O VAL B1292 SHEET 1 AA4 3 ILE B1329 PRO B1330 0 SHEET 2 AA4 3 TYR B1382 TRP B1386 -1 O PHE B1384 N ILE B1329 SHEET 3 AA4 3 LEU B1369 GLN B1373 -1 N ARG B1372 O GLU B1383 SHEET 1 AA5 3 ILE C1243 THR C1244 0 SHEET 2 AA5 3 SER C1288 THR C1293 -1 O TYR C1289 N ILE C1243 SHEET 3 AA5 3 ILE C1277 ASP C1283 -1 N LYS C1280 O VAL C1290 SHEET 1 AA6 3 ILE C1329 PRO C1330 0 SHEET 2 AA6 3 TYR C1382 TRP C1386 -1 O PHE C1384 N ILE C1329 SHEET 3 AA6 3 LEU C1369 GLN C1373 -1 N VAL C1370 O LEU C1385 SHEET 1 AA7 3 ILE D1243 THR D1244 0 SHEET 2 AA7 3 SER D1288 THR D1293 -1 O TYR D1289 N ILE D1243 SHEET 3 AA7 3 ILE D1277 ASP D1283 -1 N LYS D1280 O VAL D1290 SHEET 1 AA8 3 ILE D1329 PRO D1330 0 SHEET 2 AA8 3 TYR D1382 TRP D1386 -1 O PHE D1384 N ILE D1329 SHEET 3 AA8 3 LEU D1369 GLN D1373 -1 N ARG D1372 O GLU D1383 CISPEP 1 ASP A 1378 PRO A 1379 0 10.44 CISPEP 2 ASP B 1378 PRO B 1379 0 -13.41 CRYST1 55.493 78.195 72.911 77.44 77.34 89.59 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018020 -0.000129 -0.004121 0.00000 SCALE2 0.000000 0.012789 -0.002902 0.00000 SCALE3 0.000000 0.000000 0.014414 0.00000