HEADER VIRAL PROTEIN, RNA BINDING PROTEIN 16-APR-20 6WKP TITLE CRYSTAL STRUCTURE OF RNA-BINDING DOMAIN OF NUCLEOCAPSID PHOSPHOPROTEIN TITLE 2 FROM SARS COV-2, MONOCLINIC CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RNA-BINDING DOMAIN (UNP RESIDUES 47-173); COMPND 5 SYNONYM: NUCLEOCAPSID PROTEIN,PROTEIN N,N,NC,SARS-COV-2 NUCLEOCAPSID COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CSGID, COVID-19, SARS COV-2, RNA-BINDING DOMAIN, NUCLEOCAPSID KEYWDS 2 PROTEIN, NUCLEOPROTEIN, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS OF INFECTIOUS DISEASES, VIRAL PROTEIN, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,K.MICHALSKA,R.JEDRZEJCZAK,N.MALTSEVA,M.ENDRES,A.GODZIK,Y.KIM, AUTHOR 2 A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 5 28-FEB-24 6WKP 1 JRNL REVDAT 4 18-OCT-23 6WKP 1 REMARK REVDAT 3 27-JAN-21 6WKP 1 COMPND LINK REVDAT 2 06-MAY-20 6WKP 1 COMPND SOURCE DBREF SEQADV REVDAT 1 29-APR-20 6WKP 0 JRNL AUTH Y.KIM,N.MALTSEVA,C.TESAR,R.JEDRZEJCZAK,M.ENDRES,H.MA, JRNL AUTH 2 H.L.DUGAN,C.T.STAMPER,C.CHANG,L.LI,S.CHANGROB,N.Y.ZHENG, JRNL AUTH 3 M.HUANG,A.RAMANATHAN,P.WILSON,K.MICHALSKA,A.JOACHIMIAK JRNL TITL EPITOPES RECOGNITION OF SARS-COV-2 NUCLEOCAPSID RNA BINDING JRNL TITL 2 DOMAIN BY HUMAN MONOCLONAL ANTIBODIES. JRNL REF ISCIENCE V. 27 08976 2024 JRNL REFN ESSN 2589-0042 JRNL PMID 38327783 JRNL DOI 10.1016/J.ISCI.2024.108976 REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.7 REMARK 3 NUMBER OF REFLECTIONS : 12158 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.400 REMARK 3 FREE R VALUE TEST SET COUNT : 656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.6100 - 4.5600 0.99 2795 143 0.1834 0.2079 REMARK 3 2 4.5600 - 3.6200 0.99 2679 159 0.1768 0.2230 REMARK 3 3 3.6200 - 3.1600 0.94 2581 124 0.2111 0.2774 REMARK 3 4 3.1600 - 2.8700 0.73 1960 134 0.2452 0.3159 REMARK 3 5 2.8700 - 2.6700 0.55 1487 96 0.2519 0.3580 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 28 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4776 -9.8877 32.4463 REMARK 3 T TENSOR REMARK 3 T11: 0.7631 T22: 0.2598 REMARK 3 T33: 0.1037 T12: -0.0361 REMARK 3 T13: -0.0294 T23: -0.0672 REMARK 3 L TENSOR REMARK 3 L11: 0.0649 L22: 0.0683 REMARK 3 L33: 0.0067 L12: 0.0222 REMARK 3 L13: 0.0073 L23: -0.0123 REMARK 3 S TENSOR REMARK 3 S11: -0.1549 S12: 0.0725 S13: 0.0116 REMARK 3 S21: -0.0607 S22: 0.0595 S23: -0.0120 REMARK 3 S31: 0.0550 S32: -0.0398 S33: -0.0599 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1721 3.5687 41.5063 REMARK 3 T TENSOR REMARK 3 T11: 0.4955 T22: 0.2567 REMARK 3 T33: 0.3773 T12: -0.0582 REMARK 3 T13: -0.2551 T23: -0.0799 REMARK 3 L TENSOR REMARK 3 L11: 0.0508 L22: 0.0011 REMARK 3 L33: 0.0199 L12: -0.0047 REMARK 3 L13: -0.0304 L23: 0.0041 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: 0.0010 S13: 0.0017 REMARK 3 S21: 0.0077 S22: -0.0216 S23: -0.0311 REMARK 3 S31: -0.0311 S32: -0.0073 S33: -0.0303 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3144 -8.0294 34.2359 REMARK 3 T TENSOR REMARK 3 T11: 0.4121 T22: 0.4506 REMARK 3 T33: 0.3820 T12: -0.1905 REMARK 3 T13: 0.1035 T23: -0.1581 REMARK 3 L TENSOR REMARK 3 L11: 0.0160 L22: 0.0118 REMARK 3 L33: 0.0126 L12: 0.0066 REMARK 3 L13: 0.0159 L23: -0.0005 REMARK 3 S TENSOR REMARK 3 S11: -0.0501 S12: -0.0286 S13: -0.0586 REMARK 3 S21: -0.0418 S22: -0.0392 S23: 0.1269 REMARK 3 S31: -0.0364 S32: -0.0549 S33: -0.0016 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3204 -13.8314 39.6711 REMARK 3 T TENSOR REMARK 3 T11: 0.7968 T22: 0.4228 REMARK 3 T33: 0.3118 T12: -0.3417 REMARK 3 T13: 0.3812 T23: -0.0996 REMARK 3 L TENSOR REMARK 3 L11: 0.0465 L22: 0.0232 REMARK 3 L33: 0.0239 L12: 0.0219 REMARK 3 L13: -0.0173 L23: -0.0234 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: -0.0008 S13: -0.0262 REMARK 3 S21: 0.0130 S22: -0.0287 S23: 0.0014 REMARK 3 S31: 0.0048 S32: 0.0036 S33: 0.0184 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6324 -0.0303 42.8785 REMARK 3 T TENSOR REMARK 3 T11: 0.3622 T22: 0.4773 REMARK 3 T33: 0.3641 T12: 0.0822 REMARK 3 T13: -0.0398 T23: -0.1317 REMARK 3 L TENSOR REMARK 3 L11: 0.0066 L22: 0.0030 REMARK 3 L33: 0.0053 L12: -0.0009 REMARK 3 L13: 0.0057 L23: 0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.0877 S12: 0.0258 S13: -0.0529 REMARK 3 S21: 0.0089 S22: -0.1688 S23: 0.1163 REMARK 3 S31: 0.0189 S32: -0.0444 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 156 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9680 -7.6824 30.7498 REMARK 3 T TENSOR REMARK 3 T11: 0.9515 T22: 0.5589 REMARK 3 T33: 0.3507 T12: -0.0298 REMARK 3 T13: 0.0782 T23: 0.0839 REMARK 3 L TENSOR REMARK 3 L11: 0.0025 L22: 0.0048 REMARK 3 L33: 0.0075 L12: 0.0038 REMARK 3 L13: 0.0080 L23: 0.0050 REMARK 3 S TENSOR REMARK 3 S11: -0.1931 S12: -0.0684 S13: 0.0395 REMARK 3 S21: -0.0963 S22: -0.0842 S23: 0.0159 REMARK 3 S31: 0.0853 S32: 0.1278 S33: 0.0001 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 48 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9363 6.8456 7.0951 REMARK 3 T TENSOR REMARK 3 T11: -0.0456 T22: 0.2753 REMARK 3 T33: 0.1177 T12: 0.0634 REMARK 3 T13: 0.0976 T23: 0.0534 REMARK 3 L TENSOR REMARK 3 L11: 0.0300 L22: 0.0340 REMARK 3 L33: 0.0298 L12: -0.0334 REMARK 3 L13: -0.0247 L23: 0.0306 REMARK 3 S TENSOR REMARK 3 S11: 0.0056 S12: 0.0183 S13: -0.0121 REMARK 3 S21: 0.0047 S22: -0.1169 S23: 0.0458 REMARK 3 S31: 0.0429 S32: -0.0880 S33: -0.0911 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 64 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5962 -0.3621 7.9617 REMARK 3 T TENSOR REMARK 3 T11: -0.0693 T22: 0.1511 REMARK 3 T33: 0.4787 T12: 0.0241 REMARK 3 T13: -0.0807 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.1387 L22: 0.0020 REMARK 3 L33: 0.0099 L12: 0.0221 REMARK 3 L13: 0.0376 L23: 0.0055 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: 0.0492 S13: 0.0437 REMARK 3 S21: -0.0270 S22: -0.0374 S23: -0.0576 REMARK 3 S31: 0.0064 S32: 0.0359 S33: -0.0375 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 74 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.0274 -4.5596 12.4718 REMARK 3 T TENSOR REMARK 3 T11: 0.1546 T22: 0.1568 REMARK 3 T33: 0.1246 T12: 0.0155 REMARK 3 T13: -0.0573 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 0.0503 L22: 0.0175 REMARK 3 L33: 0.0209 L12: -0.0123 REMARK 3 L13: -0.0213 L23: -0.0001 REMARK 3 S TENSOR REMARK 3 S11: 0.0555 S12: -0.0200 S13: -0.0093 REMARK 3 S21: 0.0369 S22: 0.0736 S23: -0.0339 REMARK 3 S31: 0.0393 S32: 0.0671 S33: 0.1252 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9959 14.1267 -1.4720 REMARK 3 T TENSOR REMARK 3 T11: 0.4112 T22: 0.6466 REMARK 3 T33: 0.4913 T12: 0.2059 REMARK 3 T13: -0.0900 T23: -0.0917 REMARK 3 L TENSOR REMARK 3 L11: 0.0004 L22: 0.0058 REMARK 3 L33: 0.0018 L12: -0.0018 REMARK 3 L13: 0.0000 L23: -0.0017 REMARK 3 S TENSOR REMARK 3 S11: -0.0048 S12: 0.0092 S13: 0.0197 REMARK 3 S21: -0.0175 S22: 0.0185 S23: -0.0021 REMARK 3 S31: 0.0031 S32: -0.0137 S33: -0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 106 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2735 -3.5606 3.4742 REMARK 3 T TENSOR REMARK 3 T11: 0.0484 T22: 0.2172 REMARK 3 T33: 0.2734 T12: -0.0158 REMARK 3 T13: -0.0805 T23: -0.1017 REMARK 3 L TENSOR REMARK 3 L11: 0.1190 L22: 0.0040 REMARK 3 L33: 0.0219 L12: -0.0207 REMARK 3 L13: -0.0464 L23: 0.0034 REMARK 3 S TENSOR REMARK 3 S11: -0.0717 S12: 0.2894 S13: -0.0085 REMARK 3 S21: -0.1255 S22: -0.0879 S23: 0.0857 REMARK 3 S31: -0.0548 S32: -0.0532 S33: -0.1769 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 130 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5584 -7.4181 7.9949 REMARK 3 T TENSOR REMARK 3 T11: 0.0468 T22: 0.0989 REMARK 3 T33: 0.0885 T12: 0.0288 REMARK 3 T13: -0.0315 T23: -0.0163 REMARK 3 L TENSOR REMARK 3 L11: 0.0051 L22: 0.0140 REMARK 3 L33: 0.0047 L12: 0.0069 REMARK 3 L13: 0.0014 L23: 0.0070 REMARK 3 S TENSOR REMARK 3 S11: -0.0600 S12: -0.0047 S13: -0.0414 REMARK 3 S21: 0.0450 S22: -0.0010 S23: -0.0495 REMARK 3 S31: 0.0593 S32: 0.0459 S33: -0.0504 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 140 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1311 0.2746 13.5364 REMARK 3 T TENSOR REMARK 3 T11: -0.2463 T22: 0.0991 REMARK 3 T33: 0.2957 T12: -0.2593 REMARK 3 T13: 0.0301 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 0.2252 L22: 0.1393 REMARK 3 L33: 0.0732 L12: 0.1317 REMARK 3 L13: 0.0519 L23: 0.0649 REMARK 3 S TENSOR REMARK 3 S11: 0.0492 S12: -0.0537 S13: 0.1189 REMARK 3 S21: 0.0473 S22: -0.2699 S23: -0.0429 REMARK 3 S31: 0.1319 S32: -0.1741 S33: -0.3399 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 50 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5369 33.8718 21.3023 REMARK 3 T TENSOR REMARK 3 T11: 0.2763 T22: 0.1127 REMARK 3 T33: 0.3452 T12: 0.0766 REMARK 3 T13: 0.1416 T23: -0.0622 REMARK 3 L TENSOR REMARK 3 L11: 0.1944 L22: 0.0673 REMARK 3 L33: 0.3876 L12: -0.0753 REMARK 3 L13: 0.2656 L23: -0.1190 REMARK 3 S TENSOR REMARK 3 S11: -0.0922 S12: -0.0849 S13: -0.1412 REMARK 3 S21: 0.0528 S22: -0.0751 S23: -0.1095 REMARK 3 S31: -0.2626 S32: -0.1905 S33: -0.1014 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 70 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3048 25.7703 15.1718 REMARK 3 T TENSOR REMARK 3 T11: 0.2081 T22: 0.2737 REMARK 3 T33: 0.1852 T12: 0.3788 REMARK 3 T13: 0.1243 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.0018 L22: 0.0273 REMARK 3 L33: 0.0493 L12: 0.0016 REMARK 3 L13: -0.0010 L23: 0.0350 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: -0.0482 S13: -0.0596 REMARK 3 S21: 0.0436 S22: -0.0335 S23: -0.0835 REMARK 3 S31: -0.0023 S32: 0.0355 S33: -0.0632 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 91 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5641 33.8320 23.2003 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.2295 REMARK 3 T33: 0.0051 T12: 0.1960 REMARK 3 T13: 0.0562 T23: -0.2068 REMARK 3 L TENSOR REMARK 3 L11: 0.0048 L22: 0.0084 REMARK 3 L33: 0.0544 L12: -0.0082 REMARK 3 L13: -0.0199 L23: 0.0275 REMARK 3 S TENSOR REMARK 3 S11: -0.0004 S12: -0.0886 S13: 0.0806 REMARK 3 S21: -0.0651 S22: -0.0675 S23: 0.0555 REMARK 3 S31: 0.0008 S32: -0.0787 S33: -0.0174 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 113 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7266 29.8370 7.8043 REMARK 3 T TENSOR REMARK 3 T11: 0.0787 T22: -0.0581 REMARK 3 T33: 0.1043 T12: 0.4271 REMARK 3 T13: -0.0697 T23: 0.0841 REMARK 3 L TENSOR REMARK 3 L11: 0.1557 L22: 0.0986 REMARK 3 L33: 0.1501 L12: -0.1037 REMARK 3 L13: 0.0858 L23: -0.0190 REMARK 3 S TENSOR REMARK 3 S11: -0.0542 S12: 0.0170 S13: -0.1557 REMARK 3 S21: -0.0544 S22: -0.1369 S23: 0.0255 REMARK 3 S31: -0.1477 S32: -0.0496 S33: -0.2271 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 145 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0540 17.5287 19.5109 REMARK 3 T TENSOR REMARK 3 T11: 0.3632 T22: 0.3350 REMARK 3 T33: 0.5491 T12: 0.0036 REMARK 3 T13: 0.1231 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 0.0030 L22: 0.0058 REMARK 3 L33: 0.0029 L12: 0.0052 REMARK 3 L13: 0.0033 L23: 0.0006 REMARK 3 S TENSOR REMARK 3 S11: -0.1169 S12: 0.0291 S13: -0.0801 REMARK 3 S21: 0.0248 S22: 0.0724 S23: -0.1094 REMARK 3 S31: 0.0044 S32: -0.0611 S33: 0.0001 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 160 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2496 33.7925 26.1153 REMARK 3 T TENSOR REMARK 3 T11: 0.4174 T22: 0.2902 REMARK 3 T33: 0.2119 T12: -0.2621 REMARK 3 T13: 0.0204 T23: -0.1654 REMARK 3 L TENSOR REMARK 3 L11: 0.0376 L22: 0.0388 REMARK 3 L33: 0.0046 L12: -0.0027 REMARK 3 L13: 0.0076 L23: -0.0114 REMARK 3 S TENSOR REMARK 3 S11: 0.0602 S12: -0.0312 S13: -0.0218 REMARK 3 S21: 0.0356 S22: -0.0054 S23: -0.0543 REMARK 3 S31: -0.0065 S32: 0.0345 S33: 0.0152 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 49 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5512 17.7263 39.5765 REMARK 3 T TENSOR REMARK 3 T11: 0.1658 T22: 0.4180 REMARK 3 T33: 0.2827 T12: 0.0302 REMARK 3 T13: -0.0944 T23: -0.0506 REMARK 3 L TENSOR REMARK 3 L11: 0.0014 L22: 0.0942 REMARK 3 L33: 0.1724 L12: -0.0045 REMARK 3 L13: -0.0087 L23: 0.1278 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: -0.0393 S13: -0.0022 REMARK 3 S21: 0.0702 S22: -0.0420 S23: 0.0293 REMARK 3 S31: 0.0624 S32: 0.0099 S33: -0.0280 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 59 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9131 17.7811 53.4567 REMARK 3 T TENSOR REMARK 3 T11: 0.5509 T22: 0.4468 REMARK 3 T33: 0.3088 T12: -0.0410 REMARK 3 T13: -0.2458 T23: 0.1294 REMARK 3 L TENSOR REMARK 3 L11: 0.0063 L22: 0.0761 REMARK 3 L33: 0.0196 L12: -0.0062 REMARK 3 L13: -0.0054 L23: -0.0255 REMARK 3 S TENSOR REMARK 3 S11: 0.0437 S12: -0.0277 S13: -0.0616 REMARK 3 S21: -0.0017 S22: 0.0215 S23: 0.0032 REMARK 3 S31: -0.0402 S32: 0.0681 S33: 0.0581 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 69 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0698 26.8369 41.1739 REMARK 3 T TENSOR REMARK 3 T11: 0.2562 T22: 0.1871 REMARK 3 T33: 0.1874 T12: 0.0313 REMARK 3 T13: 0.0718 T23: 0.0385 REMARK 3 L TENSOR REMARK 3 L11: 0.0169 L22: 0.0998 REMARK 3 L33: 0.0758 L12: 0.0059 REMARK 3 L13: -0.0034 L23: 0.0864 REMARK 3 S TENSOR REMARK 3 S11: 0.1188 S12: -0.0696 S13: -0.0273 REMARK 3 S21: 0.0133 S22: 0.1439 S23: -0.0795 REMARK 3 S31: -0.1081 S32: 0.0341 S33: 0.0452 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 91 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.4110 8.2677 48.9549 REMARK 3 T TENSOR REMARK 3 T11: 0.6224 T22: 0.4338 REMARK 3 T33: 0.3536 T12: -0.1352 REMARK 3 T13: 0.0717 T23: 0.1704 REMARK 3 L TENSOR REMARK 3 L11: 0.0042 L22: 0.0016 REMARK 3 L33: 0.0010 L12: 0.0035 REMARK 3 L13: -0.0011 L23: -0.0009 REMARK 3 S TENSOR REMARK 3 S11: -0.0074 S12: -0.0009 S13: -0.0005 REMARK 3 S21: -0.0303 S22: 0.0157 S23: 0.0107 REMARK 3 S31: 0.0119 S32: 0.0118 S33: 0.0000 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 107 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7362 23.3096 42.5409 REMARK 3 T TENSOR REMARK 3 T11: 0.3552 T22: 0.2375 REMARK 3 T33: 0.1484 T12: 0.0677 REMARK 3 T13: 0.0001 T23: 0.0768 REMARK 3 L TENSOR REMARK 3 L11: 0.0747 L22: 0.0354 REMARK 3 L33: 0.0051 L12: 0.0001 REMARK 3 L13: -0.0138 L23: 0.0072 REMARK 3 S TENSOR REMARK 3 S11: 0.1023 S12: -0.0090 S13: -0.0107 REMARK 3 S21: 0.0263 S22: 0.0087 S23: 0.1013 REMARK 3 S31: -0.0107 S32: -0.0442 S33: 0.0217 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 119 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9344 29.1126 51.2728 REMARK 3 T TENSOR REMARK 3 T11: 0.8334 T22: 0.2760 REMARK 3 T33: 0.4451 T12: 0.1476 REMARK 3 T13: 0.1336 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.0245 L22: 0.0570 REMARK 3 L33: 0.2430 L12: 0.0203 REMARK 3 L13: -0.0676 L23: -0.0030 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: 0.0408 S13: 0.0716 REMARK 3 S21: 0.0723 S22: 0.0019 S23: 0.0027 REMARK 3 S31: 0.0694 S32: -0.0256 S33: 0.0060 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 130 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0103 30.7167 47.0634 REMARK 3 T TENSOR REMARK 3 T11: 0.5326 T22: 0.2146 REMARK 3 T33: 0.2259 T12: -0.0239 REMARK 3 T13: -0.0251 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: -0.0001 L22: 0.0063 REMARK 3 L33: 0.0100 L12: 0.0001 REMARK 3 L13: 0.0037 L23: -0.0016 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: -0.0451 S13: -0.0827 REMARK 3 S21: 0.0033 S22: 0.0575 S23: 0.0311 REMARK 3 S31: -0.0292 S32: 0.0183 S33: -0.0001 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 140 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0402 32.0165 36.5158 REMARK 3 T TENSOR REMARK 3 T11: 0.4630 T22: 0.4201 REMARK 3 T33: 0.4861 T12: 0.1927 REMARK 3 T13: 0.0621 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.0028 L22: 0.0041 REMARK 3 L33: 0.0037 L12: 0.0012 REMARK 3 L13: -0.0048 L23: -0.0010 REMARK 3 S TENSOR REMARK 3 S11: 0.1391 S12: 0.0141 S13: 0.0583 REMARK 3 S21: 0.0688 S22: 0.0031 S23: 0.0563 REMARK 3 S31: -0.1069 S32: 0.0630 S33: -0.0001 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 150 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8827 17.2584 39.9298 REMARK 3 T TENSOR REMARK 3 T11: 0.4797 T22: 0.3407 REMARK 3 T33: 0.3648 T12: 0.0720 REMARK 3 T13: -0.1653 T23: -0.1542 REMARK 3 L TENSOR REMARK 3 L11: 0.1205 L22: 0.0604 REMARK 3 L33: 0.0938 L12: -0.0460 REMARK 3 L13: 0.0755 L23: -0.0642 REMARK 3 S TENSOR REMARK 3 S11: -0.0422 S12: 0.1119 S13: -0.1545 REMARK 3 S21: 0.1256 S22: 0.0243 S23: -0.2566 REMARK 3 S31: 0.0882 S32: -0.0066 S33: -0.0356 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WKP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248514. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14108 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.670 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.59700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: PDB ENTRY 6VYO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, 30% PEG4000, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.92400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -152.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 46 REMARK 465 ASN A 47 REMARK 465 ASN A 48 REMARK 465 THR A 49 REMARK 465 THR A 91 REMARK 465 ARG A 92 REMARK 465 ARG A 93 REMARK 465 ILE A 94 REMARK 465 ARG A 95 REMARK 465 GLY A 96 REMARK 465 GLY A 97 REMARK 465 ASP A 98 REMARK 465 GLY A 99 REMARK 465 LYS A 100 REMARK 465 MET A 101 REMARK 465 LYS A 102 REMARK 465 ASP A 103 REMARK 465 LEU A 104 REMARK 465 SER A 105 REMARK 465 ASN A 150 REMARK 465 PRO A 151 REMARK 465 ALA A 152 REMARK 465 ASN A 153 REMARK 465 ASN A 154 REMARK 465 ALA A 155 REMARK 465 MET B 46 REMARK 465 ASN B 47 REMARK 465 ARG B 93 REMARK 465 ILE B 94 REMARK 465 ARG B 95 REMARK 465 GLY B 96 REMARK 465 GLY B 97 REMARK 465 ASP B 98 REMARK 465 GLY B 99 REMARK 465 LYS B 100 REMARK 465 MET B 101 REMARK 465 MET C 46 REMARK 465 ASN C 47 REMARK 465 ASN C 48 REMARK 465 THR C 49 REMARK 465 ASP C 98 REMARK 465 GLY C 99 REMARK 465 LYS C 100 REMARK 465 MET C 101 REMARK 465 MET D 46 REMARK 465 ASN D 47 REMARK 465 ASN D 48 REMARK 465 ARG D 93 REMARK 465 ILE D 94 REMARK 465 ARG D 95 REMARK 465 GLY D 96 REMARK 465 GLY D 97 REMARK 465 ASP D 98 REMARK 465 GLY D 99 REMARK 465 LYS D 100 REMARK 465 MET D 101 REMARK 465 LYS D 102 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 61 CG CD CE NZ REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 ASN A 126 CG OD1 ND2 REMARK 470 ASN B 48 CG OD1 ND2 REMARK 470 ARG B 92 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 102 CG CD CE NZ REMARK 470 ASP B 128 CG OD1 OD2 REMARK 470 LYS B 169 CG CD CE NZ REMARK 470 ILE C 94 CG1 CG2 CD1 REMARK 470 ARG C 95 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 102 CG CD CE NZ REMARK 470 THR D 49 OG1 CG2 REMARK 470 ARG D 92 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 169 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 77 42.77 -91.43 REMARK 500 GLU A 118 59.83 -111.94 REMARK 500 LYS A 143 59.55 -92.38 REMARK 500 THR B 49 -29.31 66.98 REMARK 500 ASN C 77 47.46 -88.99 REMARK 500 GLU C 118 51.97 -99.24 REMARK 500 PRO C 151 -73.33 -69.24 REMARK 500 ASN C 154 -153.58 -93.35 REMARK 500 ASN D 75 81.61 -152.34 REMARK 500 GLN D 83 68.29 -69.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 59 NE2 REMARK 620 2 HOH A 301 O 60.6 REMARK 620 3 ASP B 82 OD2 124.4 72.8 REMARK 620 4 HIS B 145 NE2 107.3 88.3 99.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 82 OD2 REMARK 620 2 HIS A 145 NE2 109.3 REMARK 620 3 HOH A 306 O 97.8 138.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 59 NE2 REMARK 620 2 HOH B 310 O 113.0 REMARK 620 3 ASP C 82 OD2 100.2 118.8 REMARK 620 4 HIS C 145 NE2 92.0 123.2 104.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 59 NE2 REMARK 620 2 HOH C 305 O 108.8 REMARK 620 3 ASP D 82 OD2 92.8 114.8 REMARK 620 4 HIS D 145 NE2 113.3 124.2 98.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP51003 RELATED DB: TARGETTRACK DBREF 6WKP A 47 173 UNP P0DTC9 NCAP_SARS2 47 173 DBREF 6WKP B 47 173 UNP P0DTC9 NCAP_SARS2 47 173 DBREF 6WKP C 47 173 UNP P0DTC9 NCAP_SARS2 47 173 DBREF 6WKP D 47 173 UNP P0DTC9 NCAP_SARS2 47 173 SEQADV 6WKP MET A 46 UNP P0DTC9 INITIATING METHIONINE SEQADV 6WKP MET B 46 UNP P0DTC9 INITIATING METHIONINE SEQADV 6WKP MET C 46 UNP P0DTC9 INITIATING METHIONINE SEQADV 6WKP MET D 46 UNP P0DTC9 INITIATING METHIONINE SEQRES 1 A 128 MET ASN ASN THR ALA SER TRP PHE THR ALA LEU THR GLN SEQRES 2 A 128 HIS GLY LYS GLU ASP LEU LYS PHE PRO ARG GLY GLN GLY SEQRES 3 A 128 VAL PRO ILE ASN THR ASN SER SER PRO ASP ASP GLN ILE SEQRES 4 A 128 GLY TYR TYR ARG ARG ALA THR ARG ARG ILE ARG GLY GLY SEQRES 5 A 128 ASP GLY LYS MET LYS ASP LEU SER PRO ARG TRP TYR PHE SEQRES 6 A 128 TYR TYR LEU GLY THR GLY PRO GLU ALA GLY LEU PRO TYR SEQRES 7 A 128 GLY ALA ASN LYS ASP GLY ILE ILE TRP VAL ALA THR GLU SEQRES 8 A 128 GLY ALA LEU ASN THR PRO LYS ASP HIS ILE GLY THR ARG SEQRES 9 A 128 ASN PRO ALA ASN ASN ALA ALA ILE VAL LEU GLN LEU PRO SEQRES 10 A 128 GLN GLY THR THR LEU PRO LYS GLY PHE TYR ALA SEQRES 1 B 128 MET ASN ASN THR ALA SER TRP PHE THR ALA LEU THR GLN SEQRES 2 B 128 HIS GLY LYS GLU ASP LEU LYS PHE PRO ARG GLY GLN GLY SEQRES 3 B 128 VAL PRO ILE ASN THR ASN SER SER PRO ASP ASP GLN ILE SEQRES 4 B 128 GLY TYR TYR ARG ARG ALA THR ARG ARG ILE ARG GLY GLY SEQRES 5 B 128 ASP GLY LYS MET LYS ASP LEU SER PRO ARG TRP TYR PHE SEQRES 6 B 128 TYR TYR LEU GLY THR GLY PRO GLU ALA GLY LEU PRO TYR SEQRES 7 B 128 GLY ALA ASN LYS ASP GLY ILE ILE TRP VAL ALA THR GLU SEQRES 8 B 128 GLY ALA LEU ASN THR PRO LYS ASP HIS ILE GLY THR ARG SEQRES 9 B 128 ASN PRO ALA ASN ASN ALA ALA ILE VAL LEU GLN LEU PRO SEQRES 10 B 128 GLN GLY THR THR LEU PRO LYS GLY PHE TYR ALA SEQRES 1 C 128 MET ASN ASN THR ALA SER TRP PHE THR ALA LEU THR GLN SEQRES 2 C 128 HIS GLY LYS GLU ASP LEU LYS PHE PRO ARG GLY GLN GLY SEQRES 3 C 128 VAL PRO ILE ASN THR ASN SER SER PRO ASP ASP GLN ILE SEQRES 4 C 128 GLY TYR TYR ARG ARG ALA THR ARG ARG ILE ARG GLY GLY SEQRES 5 C 128 ASP GLY LYS MET LYS ASP LEU SER PRO ARG TRP TYR PHE SEQRES 6 C 128 TYR TYR LEU GLY THR GLY PRO GLU ALA GLY LEU PRO TYR SEQRES 7 C 128 GLY ALA ASN LYS ASP GLY ILE ILE TRP VAL ALA THR GLU SEQRES 8 C 128 GLY ALA LEU ASN THR PRO LYS ASP HIS ILE GLY THR ARG SEQRES 9 C 128 ASN PRO ALA ASN ASN ALA ALA ILE VAL LEU GLN LEU PRO SEQRES 10 C 128 GLN GLY THR THR LEU PRO LYS GLY PHE TYR ALA SEQRES 1 D 128 MET ASN ASN THR ALA SER TRP PHE THR ALA LEU THR GLN SEQRES 2 D 128 HIS GLY LYS GLU ASP LEU LYS PHE PRO ARG GLY GLN GLY SEQRES 3 D 128 VAL PRO ILE ASN THR ASN SER SER PRO ASP ASP GLN ILE SEQRES 4 D 128 GLY TYR TYR ARG ARG ALA THR ARG ARG ILE ARG GLY GLY SEQRES 5 D 128 ASP GLY LYS MET LYS ASP LEU SER PRO ARG TRP TYR PHE SEQRES 6 D 128 TYR TYR LEU GLY THR GLY PRO GLU ALA GLY LEU PRO TYR SEQRES 7 D 128 GLY ALA ASN LYS ASP GLY ILE ILE TRP VAL ALA THR GLU SEQRES 8 D 128 GLY ALA LEU ASN THR PRO LYS ASP HIS ILE GLY THR ARG SEQRES 9 D 128 ASN PRO ALA ASN ASN ALA ALA ILE VAL LEU GLN LEU PRO SEQRES 10 D 128 GLN GLY THR THR LEU PRO LYS GLY PHE TYR ALA HET ZN A 201 1 HET MES B 201 12 HET ZN B 202 1 HET ZN C 201 1 HET MES D 201 12 HET ZN D 202 1 HETNAM ZN ZINC ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID FORMUL 5 ZN 4(ZN 2+) FORMUL 6 MES 2(C6 H13 N O4 S) FORMUL 11 HOH *37(H2 O) HELIX 1 AA1 SER A 79 ASP A 82 5 4 HELIX 2 AA2 SER B 79 ASP B 82 5 4 HELIX 3 AA3 THR B 115 ALA B 119 5 5 HELIX 4 AA4 SER C 79 ASP C 82 5 4 HELIX 5 AA5 SER D 79 ASP D 82 5 4 HELIX 6 AA6 THR D 115 ALA D 119 5 5 SHEET 1 AA1 4 LEU A 56 THR A 57 0 SHEET 2 AA1 4 ARG A 107 TYR A 112 -1 O TRP A 108 N LEU A 56 SHEET 3 AA1 4 ILE A 84 ARG A 89 -1 N TYR A 86 O TYR A 111 SHEET 4 AA1 4 ILE A 130 ALA A 134 -1 O VAL A 133 N GLY A 85 SHEET 1 AA2 4 LEU B 56 THR B 57 0 SHEET 2 AA2 4 ARG B 107 TYR B 112 -1 O TRP B 108 N LEU B 56 SHEET 3 AA2 4 ILE B 84 ALA B 90 -1 N TYR B 86 O TYR B 111 SHEET 4 AA2 4 ILE B 130 ALA B 134 -1 O ILE B 131 N TYR B 87 SHEET 1 AA3 4 LEU C 56 THR C 57 0 SHEET 2 AA3 4 ARG C 107 TYR C 112 -1 O TRP C 108 N LEU C 56 SHEET 3 AA3 4 ILE C 84 ALA C 90 -1 N ARG C 88 O TYR C 109 SHEET 4 AA3 4 ILE C 130 ALA C 134 -1 O VAL C 133 N GLY C 85 SHEET 1 AA4 4 LEU D 56 THR D 57 0 SHEET 2 AA4 4 ARG D 107 TYR D 112 -1 O TRP D 108 N LEU D 56 SHEET 3 AA4 4 ILE D 84 ALA D 90 -1 N TYR D 86 O TYR D 111 SHEET 4 AA4 4 ILE D 130 ALA D 134 -1 O VAL D 133 N GLY D 85 LINK NE2 HIS A 59 ZN ZN B 202 1555 1555 2.15 LINK OD2 ASP A 82 ZN ZN A 201 1555 1555 1.97 LINK NE2 HIS A 145 ZN ZN A 201 1555 1555 1.99 LINK ZN ZN A 201 O HOH A 306 1555 1555 2.22 LINK O HOH A 301 ZN ZN B 202 1555 1555 2.36 LINK NE2 HIS B 59 ZN ZN C 201 1555 1555 2.11 LINK OD2 ASP B 82 ZN ZN B 202 1555 1555 2.14 LINK NE2 HIS B 145 ZN ZN B 202 1555 1555 2.18 LINK O HOH B 310 ZN ZN C 201 1555 1555 2.26 LINK NE2 HIS C 59 ZN ZN D 202 1555 1555 2.07 LINK OD2 ASP C 82 ZN ZN C 201 1555 1555 1.99 LINK NE2 HIS C 145 ZN ZN C 201 1555 1555 2.46 LINK O HOH C 305 ZN ZN D 202 1555 1555 2.21 LINK OD2 ASP D 82 ZN ZN D 202 1555 1555 2.12 LINK NE2 HIS D 145 ZN ZN D 202 1555 1555 2.33 SITE 1 AC1 5 SER A 79 ASP A 82 HIS A 145 HOH A 306 SITE 2 AC1 5 HIS D 59 SITE 1 AC2 8 THR A 54 ALA A 55 THR A 57 ARG A 107 SITE 2 AC2 8 TYR A 109 TRP B 52 ASN B 75 ASN B 154 SITE 1 AC3 5 HIS A 59 HOH A 301 SER B 79 ASP B 82 SITE 2 AC3 5 HIS B 145 SITE 1 AC4 5 HIS B 59 HOH B 310 SER C 79 ASP C 82 SITE 2 AC4 5 HIS C 145 SITE 1 AC5 8 THR C 54 ALA C 55 ARG C 107 TYR C 109 SITE 2 AC5 8 TRP D 52 ASN D 75 ASN D 154 HOH D 301 SITE 1 AC6 4 HIS C 59 HOH C 305 ASP D 82 HIS D 145 CRYST1 33.388 71.848 106.961 90.00 92.98 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029951 0.000000 0.001557 0.00000 SCALE2 0.000000 0.013918 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009362 0.00000