HEADER LIGASE 05-MAY-20 6WUQ TITLE CRYSTAL STRUCTURE OF AJIA1 IN APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: AJIA1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP.; SOURCE 3 ORGANISM_TAXID: 1931; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ATP-DEPENDENT LIGASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR F.C.R.PAIVA,K.CHAN,P.LEADLAY,M.V.B.DIAS REVDAT 2 18-OCT-23 6WUQ 1 REMARK REVDAT 1 09-DEC-20 6WUQ 0 JRNL AUTH F.C.R.PAIVA,K.CHAN,M.SAMBORSKYY,A.M.SILBER,P.LEADLAY, JRNL AUTH 2 M.V.B.DIAS JRNL TITL THE CRYSTAL STRUCTURE OF AJIA1 REVEALS A NOVEL STRUCTURAL JRNL TITL 2 MOTION MECHANISM IN THE ADENYLATE-FORMING ENZYME FAMILY JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 76 1201 2020 JRNL REFN ESSN 1399-0047 JRNL DOI 10.1107/S2059798320013431 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 65401 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3205 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.8211 - 5.6866 1.00 2879 137 0.1610 0.1929 REMARK 3 2 5.6866 - 4.5170 1.00 2795 136 0.1533 0.1828 REMARK 3 3 4.5170 - 3.9470 1.00 2718 167 0.1452 0.1758 REMARK 3 4 3.9470 - 3.5866 1.00 2706 146 0.1712 0.2010 REMARK 3 5 3.5866 - 3.3298 1.00 2729 140 0.1978 0.2211 REMARK 3 6 3.3298 - 3.1336 1.00 2702 156 0.2113 0.2682 REMARK 3 7 3.1336 - 2.9768 1.00 2683 153 0.2313 0.2640 REMARK 3 8 2.9768 - 2.8473 1.00 2735 130 0.2225 0.2766 REMARK 3 9 2.8473 - 2.7377 1.00 2687 141 0.2147 0.2866 REMARK 3 10 2.7377 - 2.6433 1.00 2692 137 0.2052 0.2670 REMARK 3 11 2.6433 - 2.5606 1.00 2709 125 0.2117 0.2393 REMARK 3 12 2.5606 - 2.4875 1.00 2721 124 0.2103 0.2751 REMARK 3 13 2.4875 - 2.4220 1.00 2655 174 0.2055 0.2496 REMARK 3 14 2.4220 - 2.3629 1.00 2699 143 0.2127 0.2119 REMARK 3 15 2.3629 - 2.3092 1.00 2657 133 0.2154 0.2558 REMARK 3 16 2.3092 - 2.2601 1.00 2727 141 0.2262 0.2514 REMARK 3 17 2.2601 - 2.2149 1.00 2656 144 0.2328 0.3236 REMARK 3 18 2.2149 - 2.1731 1.00 2723 134 0.2443 0.2733 REMARK 3 19 2.1731 - 2.1343 1.00 2691 130 0.2584 0.3330 REMARK 3 20 2.1343 - 2.0981 1.00 2682 128 0.2745 0.3174 REMARK 3 21 2.0981 - 2.0643 1.00 2678 135 0.2934 0.3454 REMARK 3 22 2.0643 - 2.0325 1.00 2708 118 0.3132 0.3879 REMARK 3 23 2.0325 - 2.0026 0.97 2564 133 0.3501 0.3892 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6879 REMARK 3 ANGLE : 0.924 9385 REMARK 3 CHIRALITY : 0.052 1042 REMARK 3 PLANARITY : 0.008 1235 REMARK 3 DIHEDRAL : 20.947 4148 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 51.1809 12.8750 12.2218 REMARK 3 T TENSOR REMARK 3 T11: 0.4991 T22: 0.3406 REMARK 3 T33: 0.3751 T12: 0.0702 REMARK 3 T13: -0.0572 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.6347 L22: 0.8478 REMARK 3 L33: 0.3141 L12: -0.3210 REMARK 3 L13: 0.0987 L23: 0.0451 REMARK 3 S TENSOR REMARK 3 S11: 0.0986 S12: 0.1359 S13: -0.0412 REMARK 3 S21: -0.1447 S22: -0.0974 S23: 0.1389 REMARK 3 S31: 0.0636 S32: 0.0192 S33: 0.0020 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WUQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000241983. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976195 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65461 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 48.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 20.20 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 20.70 REMARK 200 R MERGE FOR SHELL (I) : 2.57300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2Y27 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% PEG 300, 100 MM POTASSIUM CITRATE REMARK 280 PHOSPHATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.81633 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.63267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 67.63267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.81633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 TRP A 3 REMARK 465 ILE A 433 REMARK 465 MET A 434 REMARK 465 TYR A 435 REMARK 465 PHE A 436 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 TRP B 3 REMARK 465 THR B 90 REMARK 465 ALA B 91 REMARK 465 GLY B 92 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 259 CG ARG A 259 CD -0.193 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 158 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 LEU A 158 CB - CG - CD2 ANGL. DEV. = 11.3 DEGREES REMARK 500 ARG A 414 CG - CD - NE ANGL. DEV. = -19.6 DEGREES REMARK 500 PRO B 214 C - N - CD ANGL. DEV. = -12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 49 -37.37 -139.95 REMARK 500 ARG A 49 -36.94 -140.14 REMARK 500 ARG A 127 60.40 -116.39 REMARK 500 LEU A 132 -42.48 59.25 REMARK 500 ASP A 154 -177.43 61.77 REMARK 500 ARG A 156 22.79 48.86 REMARK 500 ARG A 200 -35.11 -140.20 REMARK 500 GLU A 213 88.01 -54.13 REMARK 500 PRO A 214 84.86 -2.40 REMARK 500 ARG A 287 79.07 -157.98 REMARK 500 PRO A 309 1.13 -67.87 REMARK 500 THR A 325 49.53 -95.37 REMARK 500 ASP A 415 -150.88 50.32 REMARK 500 ILE A 416 -63.93 -141.26 REMARK 500 LEU A 417 174.90 68.78 REMARK 500 GLU A 425 -36.71 -38.23 REMARK 500 ARG B 49 -42.17 -136.68 REMARK 500 ARG B 127 52.18 -115.61 REMARK 500 LEU B 132 -48.89 65.64 REMARK 500 ASP B 154 -171.70 60.66 REMARK 500 ARG B 200 -19.14 -145.51 REMARK 500 GLU B 213 40.38 -83.38 REMARK 500 PRO B 214 118.78 25.37 REMARK 500 TRP B 227 30.81 -93.00 REMARK 500 ARG B 287 78.48 -160.37 REMARK 500 ALA B 323 109.14 -53.94 REMARK 500 THR B 325 35.08 -73.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 213 PRO B 214 -126.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 79 O REMARK 620 2 LEU A 81 O 88.8 REMARK 620 3 PRO B 120 O 87.4 176.0 REMARK 620 4 GLY B 147 O 86.9 88.9 89.4 REMARK 620 5 THR B 149 OG1 138.7 77.5 106.3 130.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 120 O REMARK 620 2 GLY A 147 O 85.5 REMARK 620 3 THR A 149 OG1 110.8 129.2 REMARK 620 4 ARG B 78 O 92.2 156.0 73.9 REMARK 620 5 LEU B 81 O 170.4 85.2 77.2 95.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 248 SG REMARK 620 2 HIS A 254 NE2 116.7 REMARK 620 3 CYS A 308 SG 113.0 107.5 REMARK 620 4 CYS A 310 SG 112.1 94.9 111.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 248 SG REMARK 620 2 HIS B 254 NE2 119.3 REMARK 620 3 CYS B 308 SG 107.7 104.8 REMARK 620 4 CYS B 310 SG 114.7 95.1 114.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 501 DBREF 6WUQ A 1 436 PDB 6WUQ 6WUQ 1 436 DBREF 6WUQ B 1 436 PDB 6WUQ 6WUQ 1 436 SEQRES 1 A 436 MET SER TRP SER ARG PRO GLU PRO GLY ASP TRP SER SER SEQRES 2 A 436 PRO ALA GLU LEU ALA GLU LEU GLN ARG ALA ARG LEU PRO SEQRES 3 A 436 GLN VAL ILE ALA GLN ALA LEU ARG SER PRO PHE TYR ALA SEQRES 4 A 436 ALA ARG TYR GLU GLY ARG THR PRO PRO ARG THR ALA ASP SEQRES 5 A 436 ASP PHE ALA GLY VAL GLU LEU THR THR LYS GLN ASP LEU SEQRES 6 A 436 ARG ASP GLN TYR PRO PHE GLY MET LEU ALA VAL GLU ARG SEQRES 7 A 436 GLU ARG LEU ALA THR TYR HIS GLU SER SER GLY THR ALA SEQRES 8 A 436 GLY ASP PRO THR ALA SER TYR TYR THR GLN GLU ASP TRP SEQRES 9 A 436 THR ASP LEU ALA GLU ARG PHE ALA ARG LYS TRP THR GLY SEQRES 10 A 436 ILE HIS PRO SER ASP THR PHE LEU VAL ARG THR PRO TYR SEQRES 11 A 436 GLY LEU VAL ILE THR GLY HIS LEU ALA GLN ALA ALA GLY SEQRES 12 A 436 ARG LEU ARG GLY ALA THR VAL VAL PRO GLY ASP ALA ARG SEQRES 13 A 436 SER LEU ALA THR PRO LEU SER ARG MET VAL ARG VAL LEU SEQRES 14 A 436 LYS SER LEU ASP VAL THR LEU THR TRP CYS ASN PRO THR SEQRES 15 A 436 GLU ILE THR MET LEU ALA ALA ALA ALA LYS ALA ALA GLY SEQRES 16 A 436 LEU ARG PRO ASP ARG ASP PHE PRO ALA LEU ARG ALA MET SEQRES 17 A 436 PHE THR ALA ALA GLU PRO LEU THR GLU VAL ARG ARG ARG SEQRES 18 A 436 ARG LEU SER GLU ILE TRP GLY GLY VAL PRO VAL VAL GLU SEQRES 19 A 436 GLU TYR GLY SER THR GLU THR GLY THR ILE ALA GLY GLN SEQRES 20 A 436 CYS PRO GLU GLY ARG MET HIS LEU TRP ALA ASP ARG ALA SEQRES 21 A 436 VAL PHE GLU VAL TYR ASP PRO ALA THR GLY GLU LEU SER SEQRES 22 A 436 GLU ALA GLY ARG GLY GLN MET VAL VAL THR PRO LEU TYR SEQRES 23 A 436 ARG ASP ALA MET PRO LEU LEU ARG TYR ASN LEU ALA ASP SEQRES 24 A 436 GLU VAL GLU VAL SER THR ASP PRO CYS PRO CYS GLY TRP SEQRES 25 A 436 LEU LEU PRO THR VAL THR VAL LEU GLY ARG ALA GLY THR SEQRES 26 A 436 GLU HIS THR VAL GLY SER ALA THR VAL THR GLN GLN ARG SEQRES 27 A 436 LEU GLU GLU LEU VAL PHE SER LEU PRO ALA ALA TYR GLU SEQRES 28 A 436 VAL MET PHE TRP ARG ALA LYS ALA HIS PRO ASP VAL LEU SEQRES 29 A 436 HIS LEU GLN PHE GLU ALA PRO ASP ALA THR ARG GLU GLN SEQRES 30 A 436 ALA ALA LYS GLU LEU GLY ALA ALA LEU ASP ARG GLU LEU SEQRES 31 A 436 GLY VAL PRO HIS ARG ILE GLU GLY LEU PRO LEU GLY THR SEQRES 32 A 436 LEU VAL PRO THR GLU ALA LEU THR ALA ARG ARG ASP ILE SEQRES 33 A 436 LEU LYS ALA ARG TYR LEU PHE ALA GLU GLY GLU ASP TRP SEQRES 34 A 436 ASP LYS ALA ILE MET TYR PHE SEQRES 1 B 436 MET SER TRP SER ARG PRO GLU PRO GLY ASP TRP SER SER SEQRES 2 B 436 PRO ALA GLU LEU ALA GLU LEU GLN ARG ALA ARG LEU PRO SEQRES 3 B 436 GLN VAL ILE ALA GLN ALA LEU ARG SER PRO PHE TYR ALA SEQRES 4 B 436 ALA ARG TYR GLU GLY ARG THR PRO PRO ARG THR ALA ASP SEQRES 5 B 436 ASP PHE ALA GLY VAL GLU LEU THR THR LYS GLN ASP LEU SEQRES 6 B 436 ARG ASP GLN TYR PRO PHE GLY MET LEU ALA VAL GLU ARG SEQRES 7 B 436 GLU ARG LEU ALA THR TYR HIS GLU SER SER GLY THR ALA SEQRES 8 B 436 GLY ASP PRO THR ALA SER TYR TYR THR GLN GLU ASP TRP SEQRES 9 B 436 THR ASP LEU ALA GLU ARG PHE ALA ARG LYS TRP THR GLY SEQRES 10 B 436 ILE HIS PRO SER ASP THR PHE LEU VAL ARG THR PRO TYR SEQRES 11 B 436 GLY LEU VAL ILE THR GLY HIS LEU ALA GLN ALA ALA GLY SEQRES 12 B 436 ARG LEU ARG GLY ALA THR VAL VAL PRO GLY ASP ALA ARG SEQRES 13 B 436 SER LEU ALA THR PRO LEU SER ARG MET VAL ARG VAL LEU SEQRES 14 B 436 LYS SER LEU ASP VAL THR LEU THR TRP CYS ASN PRO THR SEQRES 15 B 436 GLU ILE THR MET LEU ALA ALA ALA ALA LYS ALA ALA GLY SEQRES 16 B 436 LEU ARG PRO ASP ARG ASP PHE PRO ALA LEU ARG ALA MET SEQRES 17 B 436 PHE THR ALA ALA GLU PRO LEU THR GLU VAL ARG ARG ARG SEQRES 18 B 436 ARG LEU SER GLU ILE TRP GLY GLY VAL PRO VAL VAL GLU SEQRES 19 B 436 GLU TYR GLY SER THR GLU THR GLY THR ILE ALA GLY GLN SEQRES 20 B 436 CYS PRO GLU GLY ARG MET HIS LEU TRP ALA ASP ARG ALA SEQRES 21 B 436 VAL PHE GLU VAL TYR ASP PRO ALA THR GLY GLU LEU SER SEQRES 22 B 436 GLU ALA GLY ARG GLY GLN MET VAL VAL THR PRO LEU TYR SEQRES 23 B 436 ARG ASP ALA MET PRO LEU LEU ARG TYR ASN LEU ALA ASP SEQRES 24 B 436 GLU VAL GLU VAL SER THR ASP PRO CYS PRO CYS GLY TRP SEQRES 25 B 436 LEU LEU PRO THR VAL THR VAL LEU GLY ARG ALA GLY THR SEQRES 26 B 436 GLU HIS THR VAL GLY SER ALA THR VAL THR GLN GLN ARG SEQRES 27 B 436 LEU GLU GLU LEU VAL PHE SER LEU PRO ALA ALA TYR GLU SEQRES 28 B 436 VAL MET PHE TRP ARG ALA LYS ALA HIS PRO ASP VAL LEU SEQRES 29 B 436 HIS LEU GLN PHE GLU ALA PRO ASP ALA THR ARG GLU GLN SEQRES 30 B 436 ALA ALA LYS GLU LEU GLY ALA ALA LEU ASP ARG GLU LEU SEQRES 31 B 436 GLY VAL PRO HIS ARG ILE GLU GLY LEU PRO LEU GLY THR SEQRES 32 B 436 LEU VAL PRO THR GLU ALA LEU THR ALA ARG ARG ASP ILE SEQRES 33 B 436 LEU LYS ALA ARG TYR LEU PHE ALA GLU GLY GLU ASP TRP SEQRES 34 B 436 ASP LYS ALA ILE MET TYR PHE HET ZN A 501 1 HET MG A 502 1 HET MG A 503 1 HET ZN B 501 1 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION FORMUL 3 ZN 2(ZN 2+) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *152(H2 O) HELIX 1 AA1 SER A 13 LEU A 33 1 21 HELIX 2 AA2 SER A 35 TYR A 42 1 8 HELIX 3 AA3 ASP A 52 VAL A 57 5 6 HELIX 4 AA4 THR A 61 GLN A 68 1 8 HELIX 5 AA5 GLU A 77 GLU A 79 5 3 HELIX 6 AA6 GLN A 101 ALA A 112 1 12 HELIX 7 AA7 ILE A 134 ARG A 146 1 13 HELIX 8 AA8 PRO A 161 LEU A 172 1 12 HELIX 9 AA9 ASN A 180 ALA A 194 1 15 HELIX 10 AB1 THR A 216 TRP A 227 1 12 HELIX 11 AB2 THR A 335 SER A 345 1 11 HELIX 12 AB3 LEU A 346 GLU A 351 5 6 HELIX 13 AB4 THR A 374 LEU A 390 1 17 HELIX 14 AB5 PRO A 406 ALA A 412 1 7 HELIX 15 AB6 SER B 13 LEU B 33 1 21 HELIX 16 AB7 SER B 35 TYR B 42 1 8 HELIX 17 AB8 ASP B 52 VAL B 57 5 6 HELIX 18 AB9 THR B 61 GLN B 68 1 8 HELIX 19 AC1 GLU B 77 LEU B 81 5 5 HELIX 20 AC2 THR B 100 ALA B 112 1 13 HELIX 21 AC3 ILE B 134 ARG B 146 1 13 HELIX 22 AC4 PRO B 161 LEU B 172 1 12 HELIX 23 AC5 ASN B 180 ALA B 194 1 15 HELIX 24 AC6 THR B 216 TRP B 227 1 12 HELIX 25 AC7 GLN B 336 PHE B 344 1 9 HELIX 26 AC8 SER B 345 LEU B 346 5 2 HELIX 27 AC9 PRO B 347 GLU B 351 5 5 HELIX 28 AD1 PRO B 371 LEU B 390 1 20 HELIX 29 AD2 PRO B 406 ALA B 412 1 7 HELIX 30 AD3 ASP B 428 ILE B 433 5 6 SHEET 1 AA1 2 LEU A 81 SER A 87 0 SHEET 2 AA1 2 THR A 95 THR A 100 -1 O TYR A 99 N ALA A 82 SHEET 1 AA212 THR A 149 PRO A 152 0 SHEET 2 AA212 THR A 123 VAL A 126 1 N PHE A 124 O THR A 149 SHEET 3 AA212 LEU A 176 TRP A 178 1 O LEU A 176 N LEU A 125 SHEET 4 AA212 ALA A 207 ALA A 211 1 O PHE A 209 N THR A 177 SHEET 5 AA212 VAL A 232 SER A 238 1 O VAL A 233 N MET A 208 SHEET 6 AA212 GLY A 242 GLN A 247 -1 O ILE A 244 N TYR A 236 SHEET 7 AA212 MET A 253 LEU A 255 -1 O HIS A 254 N GLY A 246 SHEET 8 AA212 THR A 316 GLY A 321 -1 O VAL A 317 N MET A 253 SHEET 9 AA212 TYR A 295 SER A 304 -1 N GLU A 300 O GLY A 321 SHEET 10 AA212 GLY A 276 PRO A 284 -1 N GLY A 278 O VAL A 301 SHEET 11 AA212 ALA A 260 TYR A 265 -1 N TYR A 265 O GLN A 279 SHEET 12 AA212 LEU A 272 SER A 273 -1 O SER A 273 N VAL A 264 SHEET 1 AA3 2 HIS A 327 VAL A 329 0 SHEET 2 AA3 2 ALA A 332 VAL A 334 -1 O VAL A 334 N HIS A 327 SHEET 1 AA4 4 HIS A 394 LEU A 399 0 SHEET 2 AA4 4 LEU A 364 GLU A 369 1 N PHE A 368 O LEU A 399 SHEET 3 AA4 4 TRP A 355 ALA A 359 -1 N ARG A 356 O GLN A 367 SHEET 4 AA4 4 LEU B 422 ALA B 424 1 O PHE B 423 N ALA A 357 SHEET 1 AA5 4 LEU A 422 ALA A 424 0 SHEET 2 AA5 4 PHE B 354 ALA B 359 1 O ALA B 357 N PHE A 423 SHEET 3 AA5 4 LEU B 364 GLU B 369 -1 O HIS B 365 N LYS B 358 SHEET 4 AA5 4 HIS B 394 LEU B 399 1 O LEU B 399 N PHE B 368 SHEET 1 AA6 2 THR B 83 SER B 87 0 SHEET 2 AA6 2 THR B 95 TYR B 99 -1 O SER B 97 N HIS B 85 SHEET 1 AA712 THR B 149 PRO B 152 0 SHEET 2 AA712 THR B 123 VAL B 126 1 N PHE B 124 O THR B 149 SHEET 3 AA712 LEU B 176 TRP B 178 1 O LEU B 176 N LEU B 125 SHEET 4 AA712 ALA B 207 ALA B 211 1 O PHE B 209 N THR B 177 SHEET 5 AA712 VAL B 232 SER B 238 1 O VAL B 233 N MET B 208 SHEET 6 AA712 GLY B 242 GLN B 247 -1 O ALA B 245 N TYR B 236 SHEET 7 AA712 MET B 253 LEU B 255 -1 O HIS B 254 N GLY B 246 SHEET 8 AA712 THR B 316 ARG B 322 -1 O VAL B 317 N MET B 253 SHEET 9 AA712 TYR B 295 SER B 304 -1 N GLU B 300 O GLY B 321 SHEET 10 AA712 GLY B 276 PRO B 284 -1 N GLY B 278 O VAL B 301 SHEET 11 AA712 ALA B 260 TYR B 265 -1 N GLU B 263 O VAL B 281 SHEET 12 AA712 LEU B 272 SER B 273 -1 O SER B 273 N VAL B 264 SHEET 1 AA8 2 GLU B 326 VAL B 329 0 SHEET 2 AA8 2 ALA B 332 THR B 335 -1 O VAL B 334 N HIS B 327 LINK O GLU A 79 MG MG A 503 1555 1555 2.78 LINK O LEU A 81 MG MG A 503 1555 1555 2.68 LINK O PRO A 120 MG MG A 502 1555 1555 2.76 LINK O GLY A 147 MG MG A 502 1555 1555 2.79 LINK OG1 THR A 149 MG MG A 502 1555 1555 2.71 LINK SG CYS A 248 ZN ZN A 501 1555 1555 2.36 LINK NE2 HIS A 254 ZN ZN A 501 1555 1555 2.27 LINK SG CYS A 308 ZN ZN A 501 1555 1555 2.36 LINK SG CYS A 310 ZN ZN A 501 1555 1555 2.31 LINK MG MG A 502 O ARG B 78 1555 1555 2.84 LINK MG MG A 502 O LEU B 81 1555 1555 2.70 LINK MG MG A 503 O PRO B 120 1555 1555 2.77 LINK MG MG A 503 O GLY B 147 1555 1555 2.77 LINK MG MG A 503 OG1 THR B 149 1555 1555 2.60 LINK SG CYS B 248 ZN ZN B 501 1555 1555 2.27 LINK NE2 HIS B 254 ZN ZN B 501 1555 1555 2.37 LINK SG CYS B 308 ZN ZN B 501 1555 1555 2.54 LINK SG CYS B 310 ZN ZN B 501 1555 1555 2.30 CISPEP 1 TYR A 69 PRO A 70 0 -3.24 CISPEP 2 TYR B 69 PRO B 70 0 -1.44 SITE 1 AC1 4 CYS A 248 HIS A 254 CYS A 308 CYS A 310 SITE 1 AC2 7 PRO A 120 GLY A 147 ALA A 148 THR A 149 SITE 2 AC2 7 ARG B 78 GLU B 79 LEU B 81 SITE 1 AC3 7 ARG A 78 GLU A 79 LEU A 81 PRO B 120 SITE 2 AC3 7 GLY B 147 ALA B 148 THR B 149 SITE 1 AC4 4 CYS B 248 HIS B 254 CYS B 308 CYS B 310 CRYST1 128.777 128.777 101.449 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007765 0.004483 0.000000 0.00000 SCALE2 0.000000 0.008967 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009857 0.00000