HEADER METAL TRANSPORT/HYDROLASE 05-MAY-20 6WUS TITLE CRYSTAL STRUCTURE OF PRL-1 PHOSPHATASE C104D MUTANT IN COMPLEX WITH TITLE 2 THE BATEMAN DOMAIN OF CNNM2 MAGNESIUM TRANSPORTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: METAL TRANSPORTER CNNM2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 430-580; COMPND 5 SYNONYM: ANCIENT CONSERVED DOMAIN-CONTAINING PROTEIN 2,MACDP2,CYCLIN- COMPND 6 M2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROTEIN TYROSINE PHOSPHATASE TYPE IVA 1; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE 4A1,PROTEIN-TYROSINE COMPND 12 PHOSPHATASE OF REGENERATING LIVER 1,PRL-1; COMPND 13 EC: 3.1.3.48; COMPND 14 ENGINEERED: YES; COMPND 15 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CNNM2, ACDP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-SUMO; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 12 ORGANISM_COMMON: MOUSE; SOURCE 13 ORGANISM_TAXID: 10090; SOURCE 14 GENE: PTP4A1, PRL1; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PHOSPHATASE, MAGNESIUM TRANSPORTER, PROTEIN BINDING, METAL TRANSPORT, KEYWDS 2 METAL TRANSPORT-HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.KOZLOV,K.GEHRING REVDAT 2 18-OCT-23 6WUS 1 REMARK REVDAT 1 01-JUL-20 6WUS 0 JRNL AUTH G.KOZLOV,Y.FUNATO,S.CHEN,Z.ZHANG,K.ILLES,H.MIKI,K.GEHRING JRNL TITL CRYSTAL STRUCTURE OF PRL PHOSPHATASE C104D MUTANT IN COMPLEX JRNL TITL 2 WITH THE BATEMAN DOMAIN OF CNNM MAGNESIUM TRANSPORTER JRNL REF J.BIOL.CHEM. 2020 JRNL REFN ESSN 1083-351X REMARK 2 REMARK 2 RESOLUTION. 2.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 12756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 662 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.0630 - 4.7137 0.92 2457 135 0.2242 0.2291 REMARK 3 2 4.7137 - 3.7422 0.95 2438 139 0.2126 0.2808 REMARK 3 3 3.7422 - 3.2694 0.96 2446 124 0.2627 0.3016 REMARK 3 4 3.2694 - 2.9706 0.97 2437 131 0.3090 0.4116 REMARK 3 5 2.9706 - 2.7580 0.92 2316 133 0.3073 0.3780 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2353 REMARK 3 ANGLE : 0.824 3203 REMARK 3 CHIRALITY : 0.048 375 REMARK 3 PLANARITY : 0.006 416 REMARK 3 DIHEDRAL : 5.986 1410 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 429 THROUGH 442 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.8567-189.9671 309.7847 REMARK 3 T TENSOR REMARK 3 T11: 1.0609 T22: 0.9385 REMARK 3 T33: 0.3348 T12: 0.1064 REMARK 3 T13: 0.0798 T23: 0.1369 REMARK 3 L TENSOR REMARK 3 L11: 2.0186 L22: 0.3573 REMARK 3 L33: 0.8092 L12: -1.7174 REMARK 3 L13: 1.7505 L23: -0.4518 REMARK 3 S TENSOR REMARK 3 S11: -0.8648 S12: -0.1477 S13: 1.6684 REMARK 3 S21: 0.8234 S22: 0.0326 S23: -0.8630 REMARK 3 S31: -0.8618 S32: 1.3544 S33: -0.3872 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 443 THROUGH 466 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.6968-196.2474 333.1118 REMARK 3 T TENSOR REMARK 3 T11: 0.4911 T22: 0.5656 REMARK 3 T33: 0.5313 T12: -0.1294 REMARK 3 T13: -0.1227 T23: 0.1422 REMARK 3 L TENSOR REMARK 3 L11: 0.3666 L22: 1.4005 REMARK 3 L33: 3.1699 L12: -0.5329 REMARK 3 L13: -0.0128 L23: 0.4117 REMARK 3 S TENSOR REMARK 3 S11: 0.8048 S12: -0.1960 S13: 0.8015 REMARK 3 S21: 0.2464 S22: 0.2893 S23: -1.4702 REMARK 3 S31: 0.0174 S32: 1.0540 S33: 1.1211 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 467 THROUGH 475 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.9374-189.7819 348.9083 REMARK 3 T TENSOR REMARK 3 T11: 0.8227 T22: 0.7101 REMARK 3 T33: 0.6086 T12: -0.3102 REMARK 3 T13: -0.1058 T23: 0.1199 REMARK 3 L TENSOR REMARK 3 L11: 0.4007 L22: 0.3263 REMARK 3 L33: 0.1637 L12: -0.3050 REMARK 3 L13: 0.0374 L23: -0.0603 REMARK 3 S TENSOR REMARK 3 S11: 0.1689 S12: -0.0565 S13: 0.3938 REMARK 3 S21: 0.5798 S22: -0.3530 S23: -0.3923 REMARK 3 S31: 0.3226 S32: 0.2514 S33: -0.0154 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 476 THROUGH 490 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.2744-198.4024 338.7320 REMARK 3 T TENSOR REMARK 3 T11: 0.0820 T22: 0.7174 REMARK 3 T33: 0.2738 T12: -0.0926 REMARK 3 T13: -0.5659 T23: 0.2297 REMARK 3 L TENSOR REMARK 3 L11: 2.4712 L22: 1.8967 REMARK 3 L33: 0.5287 L12: -1.5040 REMARK 3 L13: -0.2031 L23: 0.7812 REMARK 3 S TENSOR REMARK 3 S11: 0.4100 S12: 0.7834 S13: 0.5055 REMARK 3 S21: 0.3948 S22: -0.6119 S23: -1.4567 REMARK 3 S31: 0.1235 S32: 0.4903 S33: 0.1467 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 491 THROUGH 500 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.4663-201.0484 340.7812 REMARK 3 T TENSOR REMARK 3 T11: 0.5755 T22: 0.4752 REMARK 3 T33: 0.4499 T12: 0.0239 REMARK 3 T13: -0.1078 T23: -0.0675 REMARK 3 L TENSOR REMARK 3 L11: 0.3631 L22: 0.5740 REMARK 3 L33: 0.6426 L12: 0.1512 REMARK 3 L13: 0.4531 L23: -0.0740 REMARK 3 S TENSOR REMARK 3 S11: -0.1379 S12: 0.4636 S13: 0.2024 REMARK 3 S21: 0.2640 S22: -0.0698 S23: -0.6170 REMARK 3 S31: 0.8289 S32: -0.7569 S33: 0.0025 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 501 THROUGH 510 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.2631-198.6594 355.3198 REMARK 3 T TENSOR REMARK 3 T11: 0.7207 T22: 0.8062 REMARK 3 T33: 0.4787 T12: -0.2136 REMARK 3 T13: -0.1346 T23: 0.2868 REMARK 3 L TENSOR REMARK 3 L11: 2.0590 L22: 1.7173 REMARK 3 L33: 0.6249 L12: 1.6984 REMARK 3 L13: 0.7822 L23: 0.9444 REMARK 3 S TENSOR REMARK 3 S11: 0.8691 S12: -0.8027 S13: -0.1271 REMARK 3 S21: 1.0726 S22: -1.1013 S23: 0.0539 REMARK 3 S31: 0.9294 S32: 0.0042 S33: 0.0326 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 511 THROUGH 522 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.7048-206.4337 343.6889 REMARK 3 T TENSOR REMARK 3 T11: 0.5737 T22: 0.6352 REMARK 3 T33: 0.6076 T12: -0.2733 REMARK 3 T13: 0.2370 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 0.5643 L22: 0.9390 REMARK 3 L33: 0.1062 L12: -0.3720 REMARK 3 L13: -0.1448 L23: 0.3125 REMARK 3 S TENSOR REMARK 3 S11: 0.3596 S12: -0.3924 S13: -0.8271 REMARK 3 S21: 0.2244 S22: 0.1584 S23: -0.4045 REMARK 3 S31: 1.0809 S32: -1.3230 S33: 0.0392 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 523 THROUGH 530 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.0987-205.7855 321.8570 REMARK 3 T TENSOR REMARK 3 T11: 0.4025 T22: 0.7195 REMARK 3 T33: 0.5712 T12: 0.1679 REMARK 3 T13: 0.1593 T23: 0.2103 REMARK 3 L TENSOR REMARK 3 L11: 0.3794 L22: 4.2929 REMARK 3 L33: 0.7378 L12: 1.2245 REMARK 3 L13: 0.4773 L23: 1.8072 REMARK 3 S TENSOR REMARK 3 S11: -0.1408 S12: 0.4658 S13: 0.2464 REMARK 3 S21: 0.2405 S22: -0.3009 S23: -1.3007 REMARK 3 S31: 0.3788 S32: 0.1114 S33: 0.3154 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 531 THROUGH 560 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.0996-205.8503 324.0116 REMARK 3 T TENSOR REMARK 3 T11: 0.3482 T22: 0.3833 REMARK 3 T33: 1.0426 T12: -0.0028 REMARK 3 T13: 0.1118 T23: 0.1342 REMARK 3 L TENSOR REMARK 3 L11: 1.2997 L22: 0.5031 REMARK 3 L33: 1.4271 L12: -0.8261 REMARK 3 L13: 0.1981 L23: 0.0039 REMARK 3 S TENSOR REMARK 3 S11: 0.5461 S12: -0.1173 S13: -0.4245 REMARK 3 S21: -0.1494 S22: -0.4958 S23: -1.2725 REMARK 3 S31: -0.2371 S32: -0.2419 S33: -0.0857 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 561 THROUGH 578 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.0630-195.9008 323.5894 REMARK 3 T TENSOR REMARK 3 T11: 0.3824 T22: 0.5022 REMARK 3 T33: 0.4311 T12: 0.0362 REMARK 3 T13: 0.0187 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 1.8776 L22: 3.1338 REMARK 3 L33: 2.0077 L12: 0.0272 REMARK 3 L13: 1.3001 L23: -0.2666 REMARK 3 S TENSOR REMARK 3 S11: -0.3153 S12: -0.5604 S13: 1.0097 REMARK 3 S21: -0.1956 S22: -0.0790 S23: -1.7571 REMARK 3 S31: -0.0329 S32: -0.2624 S33: -0.0055 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 7 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.0365-226.4541 334.0784 REMARK 3 T TENSOR REMARK 3 T11: 0.7681 T22: 0.3241 REMARK 3 T33: 0.7874 T12: 0.4356 REMARK 3 T13: 0.1474 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 4.4442 L22: 4.6736 REMARK 3 L33: 2.9381 L12: -2.3761 REMARK 3 L13: -0.6175 L23: -1.3430 REMARK 3 S TENSOR REMARK 3 S11: 0.1422 S12: -0.5466 S13: -0.7448 REMARK 3 S21: 1.1753 S22: 1.5271 S23: 2.2453 REMARK 3 S31: 0.2803 S32: -2.0004 S33: 1.1013 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 48 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.3532-227.4872 339.0034 REMARK 3 T TENSOR REMARK 3 T11: 1.4673 T22: 0.8962 REMARK 3 T33: 1.2489 T12: 0.1815 REMARK 3 T13: 0.0010 T23: 0.2102 REMARK 3 L TENSOR REMARK 3 L11: 0.1244 L22: 4.5511 REMARK 3 L33: 3.1806 L12: -0.3184 REMARK 3 L13: -0.5373 L23: -0.0075 REMARK 3 S TENSOR REMARK 3 S11: -0.3220 S12: -0.0900 S13: 0.6230 REMARK 3 S21: 2.1399 S22: 0.9747 S23: -1.9038 REMARK 3 S31: 1.5363 S32: -0.3752 S33: 0.2872 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.3544-233.3215 328.1118 REMARK 3 T TENSOR REMARK 3 T11: 0.6092 T22: 0.5496 REMARK 3 T33: 0.5407 T12: 0.2552 REMARK 3 T13: -0.0701 T23: 0.1650 REMARK 3 L TENSOR REMARK 3 L11: 4.8990 L22: 5.2031 REMARK 3 L33: 2.9780 L12: -2.6362 REMARK 3 L13: 2.1298 L23: 1.6521 REMARK 3 S TENSOR REMARK 3 S11: 0.1917 S12: -0.5124 S13: -0.1115 REMARK 3 S21: -0.5624 S22: 0.0512 S23: -0.2033 REMARK 3 S31: 0.4720 S32: 0.5365 S33: 0.0256 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6650-224.7732 317.9403 REMARK 3 T TENSOR REMARK 3 T11: 1.4404 T22: 0.6358 REMARK 3 T33: 0.5314 T12: 0.3982 REMARK 3 T13: 0.3031 T23: 0.1908 REMARK 3 L TENSOR REMARK 3 L11: 3.3688 L22: 3.0258 REMARK 3 L33: 1.6713 L12: 2.7416 REMARK 3 L13: -0.8656 L23: 0.0589 REMARK 3 S TENSOR REMARK 3 S11: 0.7180 S12: -0.2750 S13: 0.8034 REMARK 3 S21: -2.6348 S22: -0.8103 S23: -0.0320 REMARK 3 S31: 0.5370 S32: 0.2200 S33: -0.8354 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WUS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000249024. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9768 REMARK 200 MONOCHROMATOR : SINGLE-CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12756 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 24.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.54900 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5MMZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, PH 5.3, 2.0 M REMARK 280 SODIUM FORMATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 26.06900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.96750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.07900 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 26.06900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.96750 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.07900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 26.06900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.96750 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.07900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 26.06900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 63.96750 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 76.07900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -104.27600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -383.80500 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 602 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 428 REMARK 465 SER A 579 REMARK 465 GLU A 580 REMARK 465 MET B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 SER B 0 REMARK 465 HIS B 1 REMARK 465 HIS B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 LEU B 158 REMARK 465 ARG B 159 REMARK 465 PHE B 160 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 429 OG REMARK 470 LYS A 542 CG CD CE NZ REMARK 470 GLU A 554 CG CD OE1 OE2 REMARK 470 GLU A 556 CG CD OE1 OE2 REMARK 470 TYR B 14 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 15 CG CD CE NZ REMARK 470 ASN B 16 CG OD1 ND2 REMARK 470 LYS B 32 CG CD CE NZ REMARK 470 GLU B 35 CG CD OE1 OE2 REMARK 470 LYS B 39 CG CD CE NZ REMARK 470 LYS B 60 CD CE NZ REMARK 470 GLU B 61 CG CD OE1 OE2 REMARK 470 ILE B 80 CG1 CG2 CD1 REMARK 470 VAL B 113 CG1 CG2 REMARK 470 ILE B 120 CG1 CG2 CD1 REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 GLU B 127 CG CD OE1 OE2 REMARK 470 VAL B 130 CG1 CG2 REMARK 470 GLN B 131 CG CD OE1 NE2 REMARK 470 LYS B 144 CG CD CE NZ REMARK 470 LEU B 147 CG CD1 CD2 REMARK 470 LEU B 149 CG CD1 CD2 REMARK 470 GLU B 150 CG CD OE1 OE2 REMARK 470 LYS B 151 CG CD CE NZ REMARK 470 ARG B 153 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 155 CD CE NZ REMARK 470 MET B 156 CG SD CE REMARK 470 ARG B 157 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 518 O HOH A 601 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 16 -14.27 64.02 REMARK 500 TRP B 68 77.85 -116.18 REMARK 500 ASP B 104 -157.76 -88.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VMH RELATED DB: PDB DBREF 6WUS A 430 580 UNP Q3TWN3 CNNM2_MOUSE 430 580 DBREF 6WUS B 7 160 UNP Q63739 TP4A1_MOUSE 7 160 SEQADV 6WUS GLY A 428 UNP Q3TWN3 EXPRESSION TAG SEQADV 6WUS SER A 429 UNP Q3TWN3 EXPRESSION TAG SEQADV 6WUS MET B -3 UNP Q63739 INITIATING METHIONINE SEQADV 6WUS GLY B -2 UNP Q63739 EXPRESSION TAG SEQADV 6WUS SER B -1 UNP Q63739 EXPRESSION TAG SEQADV 6WUS SER B 0 UNP Q63739 EXPRESSION TAG SEQADV 6WUS HIS B 1 UNP Q63739 EXPRESSION TAG SEQADV 6WUS HIS B 2 UNP Q63739 EXPRESSION TAG SEQADV 6WUS HIS B 3 UNP Q63739 EXPRESSION TAG SEQADV 6WUS HIS B 4 UNP Q63739 EXPRESSION TAG SEQADV 6WUS HIS B 5 UNP Q63739 EXPRESSION TAG SEQADV 6WUS HIS B 6 UNP Q63739 EXPRESSION TAG SEQADV 6WUS ASP B 104 UNP Q63739 CYS 104 ENGINEERED MUTATION SEQRES 1 A 153 GLY SER GLU GLU LEU ASN ILE ILE GLN GLY ALA LEU GLU SEQRES 2 A 153 LEU ARG THR LYS THR VAL GLU ASP VAL MET THR PRO LEU SEQRES 3 A 153 ARG ASP CYS PHE MET ILE THR GLY GLU ALA ILE LEU ASP SEQRES 4 A 153 PHE ASN THR MET SER GLU ILE MET GLU SER GLY TYR THR SEQRES 5 A 153 ARG ILE PRO VAL PHE GLU GLY GLU ARG SER ASN ILE VAL SEQRES 6 A 153 ASP LEU LEU PHE VAL LYS ASP LEU ALA PHE VAL ASP PRO SEQRES 7 A 153 ASP ASP CYS THR PRO LEU LYS THR ILE THR LYS PHE TYR SEQRES 8 A 153 ASN HIS PRO LEU HIS PHE VAL PHE ASN ASP THR LYS LEU SEQRES 9 A 153 ASP ALA MET LEU GLU GLU PHE LYS LYS GLY LYS SER HIS SEQRES 10 A 153 LEU ALA ILE VAL GLN ARG VAL ASN ASN GLU GLY GLU GLY SEQRES 11 A 153 ASP PRO PHE TYR GLU VAL LEU GLY ILE VAL THR LEU GLU SEQRES 12 A 153 ASP VAL ILE GLU GLU ILE ILE LYS SER GLU SEQRES 1 B 164 MET GLY SER SER HIS HIS HIS HIS HIS HIS PRO ALA PRO SEQRES 2 B 164 VAL GLU VAL THR TYR LYS ASN MET ARG PHE LEU ILE THR SEQRES 3 B 164 HIS ASN PRO THR ASN ALA THR LEU ASN LYS PHE ILE GLU SEQRES 4 B 164 GLU LEU LYS LYS TYR GLY VAL THR THR ILE VAL ARG VAL SEQRES 5 B 164 CYS GLU ALA THR TYR ASP THR THR LEU VAL GLU LYS GLU SEQRES 6 B 164 GLY ILE HIS VAL LEU ASP TRP PRO PHE ASP ASP GLY ALA SEQRES 7 B 164 PRO PRO SER ASN GLN ILE VAL ASP ASP TRP LEU SER LEU SEQRES 8 B 164 VAL LYS ILE LYS PHE ARG GLU GLU PRO GLY CYS CYS ILE SEQRES 9 B 164 ALA VAL HIS ASP VAL ALA GLY LEU GLY ARG ALA PRO VAL SEQRES 10 B 164 LEU VAL ALA LEU ALA LEU ILE GLU GLY GLY MET LYS TYR SEQRES 11 B 164 GLU ASP ALA VAL GLN PHE ILE ARG GLN LYS ARG ARG GLY SEQRES 12 B 164 ALA PHE ASN SER LYS GLN LEU LEU TYR LEU GLU LYS TYR SEQRES 13 B 164 ARG PRO LYS MET ARG LEU ARG PHE FORMUL 3 HOH *9(H2 O) HELIX 1 AA1 SER A 429 LEU A 441 1 13 HELIX 2 AA2 THR A 445 MET A 450 1 6 HELIX 3 AA3 ASP A 466 SER A 476 1 11 HELIX 4 AA4 LYS A 498 ALA A 501 5 4 HELIX 5 AA5 ASP A 504 CYS A 508 5 5 HELIX 6 AA6 PRO A 510 TYR A 518 1 9 HELIX 7 AA7 LYS A 530 GLY A 541 1 12 HELIX 8 AA8 LEU A 569 ILE A 577 1 9 HELIX 9 AA9 THR B 29 TYR B 40 1 12 HELIX 10 AB1 THR B 56 GLU B 61 1 6 HELIX 11 AB2 SER B 77 GLU B 95 1 19 HELIX 12 AB3 GLY B 109 GLY B 122 1 14 HELIX 13 AB4 LYS B 125 ARG B 137 1 13 HELIX 14 AB5 ASN B 142 TYR B 152 1 11 SHEET 1 AA1 4 THR A 451 PRO A 452 0 SHEET 2 AA1 4 PHE A 560 THR A 568 -1 O ILE A 566 N THR A 451 SHEET 3 AA1 4 LEU A 545 ASN A 552 -1 N VAL A 548 O LEU A 564 SHEET 4 AA1 4 HIS A 523 PHE A 526 1 N VAL A 525 O ILE A 547 SHEET 1 AA2 3 ILE A 459 THR A 460 0 SHEET 2 AA2 3 ARG A 480 PHE A 484 1 O PHE A 484 N ILE A 459 SHEET 3 AA2 3 ILE A 491 PHE A 496 -1 O ASP A 493 N VAL A 483 SHEET 1 AA3 5 VAL B 10 TYR B 14 0 SHEET 2 AA3 5 MET B 17 THR B 22 -1 O PHE B 19 N VAL B 12 SHEET 3 AA3 5 CYS B 99 HIS B 103 1 O ILE B 100 N ARG B 18 SHEET 4 AA3 5 VAL B 42 ARG B 47 1 N THR B 44 O ALA B 101 SHEET 5 AA3 5 HIS B 64 ASP B 67 1 O LEU B 66 N ARG B 47 CRYST1 52.138 127.935 152.158 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019180 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007816 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006572 0.00000