HEADER VIRAL PROTEIN 06-MAY-20 6WVN TITLE CRYSTAL STRUCTURE OF NSP16-NSP10 FROM SARS-COV-2 IN COMPLEX WITH 7- TITLE 2 METHYL-GPPPA AND S-ADENOSYLMETHIONINE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2'-O-METHYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NON-STRUCTURAL PROTEIN 16; COMPND 5 EC: 2.1.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NON-STRUCTURAL PROTEIN 10; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VARIANT: (DE3)MAGIC; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PMCSG53; SOURCE 13 MOL_ID: 2; SOURCE 14 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 15 2; SOURCE 16 ORGANISM_COMMON: 2019-NCOV; SOURCE 17 ORGANISM_TAXID: 2697049; SOURCE 18 GENE: REP, 1A-1B; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 20 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 21 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 22 EXPRESSION_SYSTEM_VARIANT: (DE3)MAGIC; SOURCE 23 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, NSP16, NSP10, COMPLEX, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,M.ROSAS-LEMUS,O.KIRYUKHINA,J.S.BRUNZELLE, AUTHOR 2 K.J.F.SATCHELL,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 3 18-OCT-23 6WVN 1 REMARK REVDAT 2 27-JAN-21 6WVN 1 JRNL REVDAT 1 13-MAY-20 6WVN 0 JRNL AUTH M.ROSAS-LEMUS,G.MINASOV,L.SHUVALOVA,N.L.INNISS,O.KIRYUKHINA, JRNL AUTH 2 J.BRUNZELLE,K.J.F.SATCHELL JRNL TITL HIGH-RESOLUTION STRUCTURES OF THE SARS-COV-2 2'- O JRNL TITL 2 -METHYLTRANSFERASE REVEAL STRATEGIES FOR STRUCTURE-BASED JRNL TITL 3 INHIBITOR DESIGN. JRNL REF SCI.SIGNAL. V. 13 2020 JRNL REFN ESSN 1937-9145 JRNL PMID 32994211 JRNL DOI 10.1126/SCISIGNAL.ABE1202 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 54988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2866 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4036 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 185 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3252 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 197 REMARK 3 SOLVENT ATOMS : 324 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.34000 REMARK 3 B22 (A**2) : 0.34000 REMARK 3 B33 (A**2) : -1.11000 REMARK 3 B12 (A**2) : 0.17000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.097 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.839 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3638 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3184 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4987 ; 1.194 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7430 ; 0.310 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 448 ; 2.684 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;25.392 ;23.846 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 580 ; 8.564 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ; 9.617 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 480 ; 0.052 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4058 ; 0.054 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 721 ; 0.051 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6798 A 6820 REMARK 3 ORIGIN FOR THE GROUP (A): 95.1613 38.8302 31.0762 REMARK 3 T TENSOR REMARK 3 T11: 0.1179 T22: 0.0324 REMARK 3 T33: 0.1335 T12: 0.0041 REMARK 3 T13: -0.0183 T23: -0.0556 REMARK 3 L TENSOR REMARK 3 L11: 5.2156 L22: 0.8324 REMARK 3 L33: 3.5542 L12: 0.5730 REMARK 3 L13: 2.5600 L23: 0.3522 REMARK 3 S TENSOR REMARK 3 S11: -0.0731 S12: -0.1125 S13: 0.5605 REMARK 3 S21: 0.0894 S22: 0.0564 S23: -0.1140 REMARK 3 S31: -0.2241 S32: 0.1366 S33: 0.0167 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6821 A 6839 REMARK 3 ORIGIN FOR THE GROUP (A): 78.5475 32.7074 33.2028 REMARK 3 T TENSOR REMARK 3 T11: 0.1708 T22: 0.2129 REMARK 3 T33: 0.1278 T12: 0.0483 REMARK 3 T13: 0.0216 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 3.3356 L22: 1.6040 REMARK 3 L33: 1.7022 L12: -0.9650 REMARK 3 L13: 1.3008 L23: -0.5072 REMARK 3 S TENSOR REMARK 3 S11: -0.1594 S12: -0.5389 S13: 0.2383 REMARK 3 S21: 0.2177 S22: 0.1607 S23: 0.2408 REMARK 3 S31: -0.2065 S32: -0.5720 S33: -0.0014 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6840 A 7011 REMARK 3 ORIGIN FOR THE GROUP (A): 90.9116 20.6000 22.8846 REMARK 3 T TENSOR REMARK 3 T11: 0.1594 T22: 0.0181 REMARK 3 T33: 0.0174 T12: 0.0072 REMARK 3 T13: -0.0254 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 1.4833 L22: 1.8790 REMARK 3 L33: 1.7927 L12: -0.2395 REMARK 3 L13: 0.1681 L23: 0.2166 REMARK 3 S TENSOR REMARK 3 S11: 0.0091 S12: 0.0042 S13: -0.0804 REMARK 3 S21: -0.0355 S22: 0.1482 S23: -0.0340 REMARK 3 S31: 0.2795 S32: 0.0542 S33: -0.1574 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7012 A 7050 REMARK 3 ORIGIN FOR THE GROUP (A): 92.4572 33.6408 27.1933 REMARK 3 T TENSOR REMARK 3 T11: 0.1348 T22: 0.0247 REMARK 3 T33: 0.0797 T12: 0.0032 REMARK 3 T13: -0.0026 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 2.1201 L22: 1.5492 REMARK 3 L33: 2.1498 L12: -0.0844 REMARK 3 L13: 0.6014 L23: 0.1056 REMARK 3 S TENSOR REMARK 3 S11: -0.0337 S12: -0.0828 S13: 0.2266 REMARK 3 S21: 0.0430 S22: 0.1413 S23: -0.1281 REMARK 3 S31: -0.0896 S32: 0.1031 S33: -0.1076 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7051 A 7081 REMARK 3 ORIGIN FOR THE GROUP (A): 105.8350 24.5036 7.3554 REMARK 3 T TENSOR REMARK 3 T11: 0.1799 T22: 0.1813 REMARK 3 T33: 0.1170 T12: -0.0044 REMARK 3 T13: 0.1067 T23: -0.0449 REMARK 3 L TENSOR REMARK 3 L11: 7.6517 L22: 4.2593 REMARK 3 L33: 4.6355 L12: -0.4999 REMARK 3 L13: -0.2262 L23: -0.3062 REMARK 3 S TENSOR REMARK 3 S11: 0.0710 S12: 0.5898 S13: 0.0747 REMARK 3 S21: -0.4055 S22: -0.0073 S23: -0.6031 REMARK 3 S31: 0.0299 S32: 0.4001 S33: -0.0637 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7082 A 7096 REMARK 3 ORIGIN FOR THE GROUP (A): 92.7580 2.0199 16.0132 REMARK 3 T TENSOR REMARK 3 T11: 0.2213 T22: 0.0340 REMARK 3 T33: 0.0620 T12: -0.0058 REMARK 3 T13: -0.0101 T23: -0.0396 REMARK 3 L TENSOR REMARK 3 L11: 1.8145 L22: 12.1853 REMARK 3 L33: 11.5572 L12: 2.6099 REMARK 3 L13: -3.2685 L23: -11.2461 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: -0.0060 S13: 0.0465 REMARK 3 S21: -0.0050 S22: 0.2444 S23: 0.0182 REMARK 3 S31: 0.1177 S32: -0.0983 S33: -0.2137 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4263 B 4284 REMARK 3 ORIGIN FOR THE GROUP (A): 58.3656 0.1884 12.8021 REMARK 3 T TENSOR REMARK 3 T11: 0.1058 T22: 0.1715 REMARK 3 T33: 0.3283 T12: -0.0941 REMARK 3 T13: -0.0048 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 0.5171 L22: 9.5221 REMARK 3 L33: 2.3025 L12: -2.0781 REMARK 3 L13: -0.1540 L23: 2.2437 REMARK 3 S TENSOR REMARK 3 S11: 0.0902 S12: 0.0609 S13: -0.1201 REMARK 3 S21: -0.4139 S22: 0.0239 S23: 0.3951 REMARK 3 S31: -0.0912 S32: 0.3456 S33: -0.1141 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4285 B 4332 REMARK 3 ORIGIN FOR THE GROUP (A): 67.9666 21.9459 12.3218 REMARK 3 T TENSOR REMARK 3 T11: 0.1260 T22: 0.1704 REMARK 3 T33: 0.1862 T12: -0.0608 REMARK 3 T13: -0.1411 T23: 0.0347 REMARK 3 L TENSOR REMARK 3 L11: 2.9646 L22: 4.4220 REMARK 3 L33: 2.4591 L12: -0.7815 REMARK 3 L13: -0.0010 L23: -0.4952 REMARK 3 S TENSOR REMARK 3 S11: 0.1066 S12: 0.3135 S13: -0.1808 REMARK 3 S21: -0.3955 S22: 0.0072 S23: 0.7265 REMARK 3 S31: 0.1746 S32: -0.5042 S33: -0.1138 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4333 B 4342 REMARK 3 ORIGIN FOR THE GROUP (A): 70.3297 3.6130 8.0182 REMARK 3 T TENSOR REMARK 3 T11: 0.2189 T22: 0.1427 REMARK 3 T33: 0.2016 T12: 0.0049 REMARK 3 T13: -0.0782 T23: -0.0708 REMARK 3 L TENSOR REMARK 3 L11: 8.2698 L22: 3.1995 REMARK 3 L33: 8.6832 L12: -1.0044 REMARK 3 L13: -6.7012 L23: 1.5975 REMARK 3 S TENSOR REMARK 3 S11: 0.1033 S12: 0.4134 S13: -0.0031 REMARK 3 S21: -0.3295 S22: -0.0491 S23: 0.2879 REMARK 3 S31: 0.1751 S32: 0.1524 S33: -0.0542 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4343 B 4370 REMARK 3 ORIGIN FOR THE GROUP (A): 64.8628 18.5506 9.4391 REMARK 3 T TENSOR REMARK 3 T11: 0.3066 T22: 0.4034 REMARK 3 T33: 0.3712 T12: -0.1407 REMARK 3 T13: -0.2161 T23: -0.0629 REMARK 3 L TENSOR REMARK 3 L11: 3.1740 L22: 4.7904 REMARK 3 L33: 3.0614 L12: -1.4193 REMARK 3 L13: 1.5587 L23: -0.4714 REMARK 3 S TENSOR REMARK 3 S11: 0.1544 S12: 0.2726 S13: -0.4850 REMARK 3 S21: -0.4034 S22: -0.0519 S23: 0.9031 REMARK 3 S31: 0.2281 S32: -0.6270 S33: -0.1025 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4371 B 4385 REMARK 3 ORIGIN FOR THE GROUP (A): 60.6320 22.0700 -3.1849 REMARK 3 T TENSOR REMARK 3 T11: 0.1923 T22: 0.3098 REMARK 3 T33: 0.1664 T12: -0.0015 REMARK 3 T13: -0.1696 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 0.3590 L22: 4.9662 REMARK 3 L33: 9.2042 L12: 0.6842 REMARK 3 L13: -1.5667 L23: -1.2958 REMARK 3 S TENSOR REMARK 3 S11: 0.0234 S12: 0.1805 S13: -0.0366 REMARK 3 S21: -0.3177 S22: 0.1150 S23: 0.0741 REMARK 3 S31: 0.0314 S32: -0.5048 S33: -0.1384 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6WVN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000249048. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-APR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58029 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.86700 REMARK 200 R SYM FOR SHELL (I) : 0.86700 REMARK 200 FOR SHELL : 2.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6W4H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 5.3 MG/ML (NSP10/NSP16 1:1), REMARK 280 0.15M SODIUM CHLORIDE, 0.01M TRIS PH 7.5 , 2MM SAM, 1MM TCEP, 5% REMARK 280 GLYCEROL; SCREEN: ANIONS (F3), 0.1M HEPES PH 7.5, 0.9M SODIUM REMARK 280 PHOSPHATE, 0.9M POTASSIUM PHOSPHATE; SOAK AND CRYO: 5MM SAM, REMARK 280 0.5MM GPPPA, 2M LITHIUM SULFATE., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 17.36100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.72200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 34.72200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 17.36100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 6796 REMARK 465 ASN A 6797 REMARK 465 SER B 4251 REMARK 465 ASN B 4252 REMARK 465 ALA B 4253 REMARK 465 ALA B 4254 REMARK 465 GLY B 4255 REMARK 465 ASN B 4256 REMARK 465 ALA B 4257 REMARK 465 THR B 4258 REMARK 465 GLU B 4259 REMARK 465 VAL B 4260 REMARK 465 PRO B 4261 REMARK 465 ALA B 4262 REMARK 465 LEU B 4386 REMARK 465 ARG B 4387 REMARK 465 GLU B 4388 REMARK 465 PRO B 4389 REMARK 465 MET B 4390 REMARK 465 LEU B 4391 REMARK 465 GLN B 4392 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A6918 132.35 -175.33 REMARK 500 GLU A6945 -113.26 -102.20 REMARK 500 GLU A6945 -112.32 -100.87 REMARK 500 ASN A7008 90.08 73.94 REMARK 500 ARG A7081 163.42 178.92 REMARK 500 TYR B4379 50.65 -145.70 REMARK 500 ASP B4384 53.17 -91.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B4401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B4327 SG REMARK 620 2 CYS B4330 SG 114.9 REMARK 620 3 HIS B4336 NE2 107.7 103.1 REMARK 620 4 CYS B4343 SG 106.7 120.8 102.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B4402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B4370 SG REMARK 620 2 CYS B4373 SG 103.3 REMARK 620 3 CYS B4381 SG 96.5 110.0 REMARK 620 4 CYS B4383 SG 116.2 115.7 113.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7104 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7105 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7106 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7107 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7108 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 7111 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAM A 7112 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GTA A 7113 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MGP A 7114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADE A 7115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADE A 7116 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 7117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 7118 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 7119 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 7120 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 7121 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 7122 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 7123 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 7124 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 4401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 4402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 4403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 4404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 4405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 4406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AF3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 4407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP51000.201 RELATED DB: TARGETTRACK DBREF 6WVN A 6799 7096 UNP P0DTD1 R1AB_SARS2 6799 7096 DBREF 6WVN B 4254 4392 UNP P0DTD1 R1AB_SARS2 4254 4392 SEQADV 6WVN SER A 6796 UNP P0DTD1 EXPRESSION TAG SEQADV 6WVN ASN A 6797 UNP P0DTD1 EXPRESSION TAG SEQADV 6WVN ALA A 6798 UNP P0DTD1 EXPRESSION TAG SEQADV 6WVN SER B 4251 UNP P0DTD1 EXPRESSION TAG SEQADV 6WVN ASN B 4252 UNP P0DTD1 EXPRESSION TAG SEQADV 6WVN ALA B 4253 UNP P0DTD1 EXPRESSION TAG SEQRES 1 A 301 SER ASN ALA SER SER GLN ALA TRP GLN PRO GLY VAL ALA SEQRES 2 A 301 MET PRO ASN LEU TYR LYS MET GLN ARG MET LEU LEU GLU SEQRES 3 A 301 LYS CYS ASP LEU GLN ASN TYR GLY ASP SER ALA THR LEU SEQRES 4 A 301 PRO LYS GLY ILE MET MET ASN VAL ALA LYS TYR THR GLN SEQRES 5 A 301 LEU CYS GLN TYR LEU ASN THR LEU THR LEU ALA VAL PRO SEQRES 6 A 301 TYR ASN MET ARG VAL ILE HIS PHE GLY ALA GLY SER ASP SEQRES 7 A 301 LYS GLY VAL ALA PRO GLY THR ALA VAL LEU ARG GLN TRP SEQRES 8 A 301 LEU PRO THR GLY THR LEU LEU VAL ASP SER ASP LEU ASN SEQRES 9 A 301 ASP PHE VAL SER ASP ALA ASP SER THR LEU ILE GLY ASP SEQRES 10 A 301 CYS ALA THR VAL HIS THR ALA ASN LYS TRP ASP LEU ILE SEQRES 11 A 301 ILE SER ASP MET TYR ASP PRO LYS THR LYS ASN VAL THR SEQRES 12 A 301 LYS GLU ASN ASP SER LYS GLU GLY PHE PHE THR TYR ILE SEQRES 13 A 301 CYS GLY PHE ILE GLN GLN LYS LEU ALA LEU GLY GLY SER SEQRES 14 A 301 VAL ALA ILE LYS ILE THR GLU HIS SER TRP ASN ALA ASP SEQRES 15 A 301 LEU TYR LYS LEU MET GLY HIS PHE ALA TRP TRP THR ALA SEQRES 16 A 301 PHE VAL THR ASN VAL ASN ALA SER SER SER GLU ALA PHE SEQRES 17 A 301 LEU ILE GLY CYS ASN TYR LEU GLY LYS PRO ARG GLU GLN SEQRES 18 A 301 ILE ASP GLY TYR VAL MET HIS ALA ASN TYR ILE PHE TRP SEQRES 19 A 301 ARG ASN THR ASN PRO ILE GLN LEU SER SER TYR SER LEU SEQRES 20 A 301 PHE ASP MET SER LYS PHE PRO LEU LYS LEU ARG GLY THR SEQRES 21 A 301 ALA VAL MET SER LEU LYS GLU GLY GLN ILE ASN ASP MET SEQRES 22 A 301 ILE LEU SER LEU LEU SER LYS GLY ARG LEU ILE ILE ARG SEQRES 23 A 301 GLU ASN ASN ARG VAL VAL ILE SER SER ASP VAL LEU VAL SEQRES 24 A 301 ASN ASN SEQRES 1 B 142 SER ASN ALA ALA GLY ASN ALA THR GLU VAL PRO ALA ASN SEQRES 2 B 142 SER THR VAL LEU SER PHE CYS ALA PHE ALA VAL ASP ALA SEQRES 3 B 142 ALA LYS ALA TYR LYS ASP TYR LEU ALA SER GLY GLY GLN SEQRES 4 B 142 PRO ILE THR ASN CYS VAL LYS MET LEU CYS THR HIS THR SEQRES 5 B 142 GLY THR GLY GLN ALA ILE THR VAL THR PRO GLU ALA ASN SEQRES 6 B 142 MET ASP GLN GLU SER PHE GLY GLY ALA SER CYS CYS LEU SEQRES 7 B 142 TYR CYS ARG CYS HIS ILE ASP HIS PRO ASN PRO LYS GLY SEQRES 8 B 142 PHE CYS ASP LEU LYS GLY LYS TYR VAL GLN ILE PRO THR SEQRES 9 B 142 THR CYS ALA ASN ASP PRO VAL GLY PHE THR LEU LYS ASN SEQRES 10 B 142 THR VAL CYS THR VAL CYS GLY MET TRP LYS GLY TYR GLY SEQRES 11 B 142 CYS SER CYS ASP GLN LEU ARG GLU PRO MET LEU GLN HET CL A7101 1 HET CL A7102 1 HET CL A7103 1 HET CL A7104 2 HET CL A7105 1 HET CL A7106 1 HET CL A7107 1 HET CL A7108 1 HET CL A7109 1 HET CL A7110 1 HET CL A7111 1 HET SAM A7112 27 HET GTA A7113 51 HET MGP A7114 33 HET ADE A7115 10 HET ADE A7116 10 HET SO4 A7117 5 HET SO4 A7118 5 HET SO4 A7119 5 HET SO4 A7120 5 HET SO4 A7121 5 HET SO4 A7122 5 HET SO4 A7123 5 HET SO4 A7124 5 HET ZN B4401 1 HET ZN B4402 1 HET CL B4403 1 HET CL B4404 1 HET CL B4405 1 HET SO4 B4406 5 HET SO4 B4407 5 HETNAM CL CHLORIDE ION HETNAM SAM S-ADENOSYLMETHIONINE HETNAM GTA P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE HETNAM MGP 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE HETNAM ADE ADENINE HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION HETSYN GTA 7-METHYL-GPPPA FORMUL 3 CL 14(CL 1-) FORMUL 14 SAM C15 H22 N6 O5 S FORMUL 15 GTA C21 H30 N10 O17 P3 1+ FORMUL 16 MGP C11 H19 N5 O14 P3 1+ FORMUL 17 ADE 2(C5 H5 N5) FORMUL 19 SO4 10(O4 S 2-) FORMUL 27 ZN 2(ZN 2+) FORMUL 34 HOH *324(H2 O) HELIX 1 AA1 SER A 6799 GLN A 6804 5 6 HELIX 2 AA2 PRO A 6810 MET A 6815 1 6 HELIX 3 AA3 MET A 6839 ASN A 6853 1 15 HELIX 4 AA4 ALA A 6877 LEU A 6887 1 11 HELIX 5 AA5 ASP A 6912 ALA A 6914 5 3 HELIX 6 AA6 ASP A 6931 ASN A 6936 5 6 HELIX 7 AA7 GLY A 6946 LYS A 6958 1 13 HELIX 8 AA8 ASN A 6975 GLY A 6983 1 9 HELIX 9 AA9 VAL A 6995 ALA A 6997 5 3 HELIX 10 AB1 ASP A 7018 ASN A 7033 1 16 HELIX 11 AB2 SER A 7039 ASP A 7044 5 6 HELIX 12 AB3 LYS A 7061 ILE A 7065 5 5 HELIX 13 AB4 ASN A 7066 SER A 7074 1 9 HELIX 14 AB5 SER B 4264 VAL B 4274 1 11 HELIX 15 AB6 ASP B 4275 SER B 4286 1 12 HELIX 16 AB7 ALA B 4324 CYS B 4326 5 3 HELIX 17 AB8 CYS B 4327 HIS B 4333 1 7 HELIX 18 AB9 ASN B 4338 PHE B 4342 5 5 HELIX 19 AC1 THR B 4355 ALA B 4357 5 3 HELIX 20 AC2 ASP B 4359 ASN B 4367 1 9 SHEET 1 AA1 8 GLY A6806 ALA A6808 0 SHEET 2 AA1 8 PHE A6985 THR A6993 -1 O VAL A6992 N VAL A6807 SHEET 3 AA1 8 ALA A7002 TYR A7009 -1 O CYS A7007 N TRP A6987 SHEET 4 AA1 8 LEU A6959 ILE A6969 -1 N ILE A6967 O LEU A7004 SHEET 5 AA1 8 TRP A6922 SER A6927 1 N TRP A6922 O ALA A6960 SHEET 6 AA1 8 ARG A6864 PHE A6868 1 N PHE A6868 O ILE A6926 SHEET 7 AA1 8 LEU A6892 ASP A6897 1 O LEU A6892 N VAL A6865 SHEET 8 AA1 8 SER A6907 ILE A6910 1 O SER A6907 N ASP A6895 SHEET 1 AA2 2 VAL A6916 HIS A6917 0 SHEET 2 AA2 2 SER A7089 SER A7090 -1 O SER A7089 N HIS A6917 SHEET 1 AA3 2 ALA A7056 MET A7058 0 SHEET 2 AA3 2 LEU A7078 ILE A7080 1 O ILE A7079 N MET A7058 SHEET 1 AA4 3 ILE B4308 THR B4309 0 SHEET 2 AA4 3 TYR B4349 PRO B4353 -1 O TYR B4349 N THR B4309 SHEET 3 AA4 3 GLN B4318 GLY B4322 -1 N GLU B4319 O ILE B4352 LINK SG CYS B4327 ZN ZN B4401 1555 1555 2.09 LINK SG CYS B4330 ZN ZN B4401 1555 1555 2.36 LINK NE2 HIS B4336 ZN ZN B4401 1555 1555 2.24 LINK SG CYS B4343 ZN ZN B4401 1555 1555 2.12 LINK SG CYS B4370 ZN ZN B4402 1555 1555 2.34 LINK SG CYS B4373 ZN ZN B4402 1555 1555 2.35 LINK SG CYS B4381 ZN ZN B4402 1555 1555 2.34 LINK SG CYS B4383 ZN ZN B4402 1555 1555 2.35 SITE 1 AC1 2 ARG A7053 ARG A7077 SITE 1 AC2 5 PRO A7034 GLN A7036 ADE A7115 HOH A7396 SITE 2 AC2 5 HOH A7440 SITE 1 AC3 1 GLU A6945 SITE 1 AC4 2 GLY A6946 HOH A7382 SITE 1 AC5 6 PRO A6810 ASN A6811 LEU A6812 THR B4300 SITE 2 AC5 6 HOH B4503 HOH B4517 SITE 1 AC6 2 ALA A6832 LEU A6834 SITE 1 AC7 1 ILE A6910 SITE 1 AC8 2 LYS A6939 ASN A7083 SITE 1 AC9 1 ASP A6900 SITE 1 AD1 1 ARG A6817 SITE 1 AD2 21 ASN A6841 TYR A6845 GLY A6869 GLY A6871 SITE 2 AD2 21 PRO A6878 GLY A6879 ASP A6897 LEU A6898 SITE 3 AD2 21 ASN A6899 ASP A6912 CYS A6913 ASP A6928 SITE 4 AD2 21 MET A6929 TYR A6930 GTA A7113 SO4 A7117 SITE 5 AD2 21 HOH A7236 HOH A7254 HOH A7269 HOH A7314 SITE 6 AD2 21 HOH A7401 SITE 1 AD3 25 CYS A6823 ASP A6824 LEU A6825 TYR A6828 SITE 2 AD3 25 LYS A6844 TYR A6930 LYS A6935 LYS A6968 SITE 3 AD3 25 THR A6970 GLU A6971 HIS A6972 SER A6999 SITE 4 AD3 25 SER A7000 GLU A7001 SAM A7112 SO4 A7117 SITE 5 AD3 25 HOH A7219 HOH A7231 HOH A7239 HOH A7241 SITE 6 AD3 25 HOH A7292 HOH A7332 HOH A7336 HOH A7360 SITE 7 AD3 25 HOH A7407 SITE 1 AD4 9 LEU A6855 THR A6856 TRP A6987 SER A7074 SITE 2 AD4 9 HOH A7243 HOH A7310 HOH A7377 HOH A7389 SITE 3 AD4 9 THR B4302 SITE 1 AD5 4 TRP A6803 GLN A6826 CL A7102 HOH A7392 SITE 1 AD6 2 TYR A7020 HOH A7250 SITE 1 AD7 7 ASN A6841 SAM A7112 GTA A7113 HOH A7219 SITE 2 AD7 7 HOH A7227 HOH A7229 HOH A7264 SITE 1 AD8 7 MET A6839 MET A6840 LYS A6874 HOH A7205 SITE 2 AD8 7 HOH A7255 HOH A7304 HOH A7356 SITE 1 AD9 5 HIS A6917 THR A6918 LYS A6958 HOH A7388 SITE 2 AD9 5 HOH A7402 SITE 1 AE1 6 ARG A6864 ASN A6920 LYS A6921 ARG A7081 SITE 2 AE1 6 GLU A7082 ASN A7084 SITE 1 AE2 5 LYS A6836 GLY A6837 HOH A7242 HOH A7393 SITE 2 AE2 5 HOH B4505 SITE 1 AE3 2 ASP A6830 SER A6831 SITE 1 AE4 2 LYS A7075 ARG A7077 SITE 1 AE5 6 HIS A6984 GLY A7011 PRO A7013 HOH A7207 SITE 2 AE5 6 HOH A7230 HOH A7368 SITE 1 AE6 4 CYS B4327 CYS B4330 HIS B4336 CYS B4343 SITE 1 AE7 4 CYS B4370 CYS B4373 CYS B4381 CYS B4383 SITE 1 AE8 3 THR B4309 VAL B4310 HOH B4527 SITE 1 AE9 1 LYS A6836 SITE 1 AF1 3 ASP B4335 HIS B4336 GLY B4341 SITE 1 AF2 7 LYS A6836 GLY A6837 HOH A7272 LYS B4296 SITE 2 AF2 7 ASN B4358 HOH B4505 HOH B4524 SITE 1 AF3 5 THR B4300 THR B4302 HOH B4513 HOH B4530 SITE 2 AF3 5 HOH B4536 CRYST1 169.372 169.372 52.083 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005904 0.003409 0.000000 0.00000 SCALE2 0.000000 0.006818 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019200 0.00000