HEADER METAL BINDING PROTEIN 11-MAY-20 6WXK TITLE PHF23 PHD DOMAIN APO COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHD FINGER PROTEIN 23; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: PDH-CONTAINING PROTEIN JUNE-1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PHF23; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHF23, PHD FINGER, HISTONE, CHROMATIN, NUP98 FUSION, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.R.VANN,J.ZHANG,Y.ZHANG,T.KUTATELADZE REVDAT 2 18-OCT-23 6WXK 1 REMARK REVDAT 1 15-JUL-20 6WXK 0 JRNL AUTH Y.ZHANG,Y.GUO,S.M.GOUGH,J.ZHANG,K.R.VANN,K.LI,L.CAI,X.SHI, JRNL AUTH 2 P.D.APLAN,G.G.WANG,T.G.KUTATELADZE JRNL TITL MECHANISTIC INSIGHTS INTO CHROMATIN TARGETING BY LEUKEMIC JRNL TITL 2 NUP98-PHF23 FUSION. JRNL REF NAT COMMUN V. 11 3339 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32620764 JRNL DOI 10.1038/S41467-020-17098-4 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V1.16 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 7604 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.294 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2004 REMARK 3 ANGLE : 0.999 2695 REMARK 3 CHIRALITY : 0.055 291 REMARK 3 PLANARITY : 0.007 329 REMARK 3 DIHEDRAL : 11.804 1210 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6WXK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000247280. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.65 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8025 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.49000 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3O70 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.65 AND 25% TERT REMARK 280 -BUTANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.52400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 33.45800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 33.45800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.76200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 33.45800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 33.45800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 113.28600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 33.45800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.45800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 37.76200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 33.45800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.45800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 113.28600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 75.52400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 333 REMARK 465 PRO A 334 REMARK 465 LEU A 335 REMARK 465 GLY A 336 REMARK 465 GLU A 386 REMARK 465 LEU A 387 REMARK 465 ARG A 388 REMARK 465 PRO A 389 REMARK 465 GLU A 390 REMARK 465 ALA A 391 REMARK 465 ARG A 392 REMARK 465 ARG A 393 REMARK 465 GLY B 333 REMARK 465 PRO B 334 REMARK 465 GLU B 386 REMARK 465 LEU B 387 REMARK 465 ARG B 388 REMARK 465 PRO B 389 REMARK 465 GLU B 390 REMARK 465 ALA B 391 REMARK 465 ARG B 392 REMARK 465 ARG B 393 REMARK 465 GLY C 333 REMARK 465 PRO C 334 REMARK 465 GLU C 386 REMARK 465 LEU C 387 REMARK 465 ARG C 388 REMARK 465 PRO C 389 REMARK 465 GLU C 390 REMARK 465 ALA C 391 REMARK 465 ARG C 392 REMARK 465 ARG C 393 REMARK 465 LYS D 383 REMARK 465 CYS D 384 REMARK 465 LYS D 385 REMARK 465 GLU D 386 REMARK 465 LEU D 387 REMARK 465 ARG D 388 REMARK 465 PRO D 389 REMARK 465 GLU D 390 REMARK 465 ALA D 391 REMARK 465 ARG D 392 REMARK 465 ARG D 393 REMARK 465 GLY E 333 REMARK 465 PRO E 334 REMARK 465 LEU E 335 REMARK 465 LYS E 383 REMARK 465 CYS E 384 REMARK 465 LYS E 385 REMARK 465 GLU E 386 REMARK 465 LEU E 387 REMARK 465 ARG E 388 REMARK 465 PRO E 389 REMARK 465 GLU E 390 REMARK 465 ALA E 391 REMARK 465 ARG E 392 REMARK 465 ARG E 393 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 371 CG CD CE NZ REMARK 480 LYS A 372 CB CG CD CE NZ REMARK 480 LYS A 383 CB CG CD CE NZ REMARK 480 LYS B 385 CG CD CE NZ REMARK 480 ARG D 345 CG CD NE REMARK 480 LEU D 358 CG CD1 CD2 REMARK 480 LYS E 372 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS E 359 SG CYS E 381 1.23 REMARK 500 SG CYS A 356 ZN ZN A 402 1.62 REMARK 500 SG CYS D 359 SG CYS D 381 1.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 348 -71.02 -43.08 REMARK 500 LEU A 358 -57.19 -120.07 REMARK 500 LYS B 383 6.37 -68.37 REMARK 500 CYS B 384 117.36 -169.06 REMARK 500 CYS C 384 32.47 -93.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 342 SG REMARK 620 2 HIS A 364 ND1 90.3 REMARK 620 3 CYS A 367 SG 95.4 169.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 359 SG REMARK 620 2 CYS A 381 SG 94.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 342 SG REMARK 620 2 CYS B 344 SG 99.4 REMARK 620 3 HIS B 364 ND1 96.4 88.5 REMARK 620 4 CYS B 367 SG 122.7 101.7 136.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 356 SG REMARK 620 2 CYS B 381 SG 94.3 REMARK 620 3 CYS B 384 SG 103.0 85.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 342 SG REMARK 620 2 CYS C 344 SG 107.0 REMARK 620 3 HIS C 364 ND1 97.5 93.9 REMARK 620 4 CYS C 367 SG 110.0 102.2 141.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 356 SG REMARK 620 2 CYS C 359 SG 97.7 REMARK 620 3 CYS C 381 SG 107.7 111.2 REMARK 620 4 CYS C 384 SG 104.4 116.8 116.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 342 SG REMARK 620 2 CYS D 344 SG 118.5 REMARK 620 3 HIS D 364 ND1 117.7 92.0 REMARK 620 4 CYS D 367 SG 123.8 84.0 111.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 356 SG REMARK 620 2 CYS D 359 SG 77.6 REMARK 620 3 CYS D 381 SG 65.9 47.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 342 SG REMARK 620 2 CYS E 344 SG 113.1 REMARK 620 3 HIS E 364 ND1 100.2 92.9 REMARK 620 4 CYS E 367 SG 118.5 107.1 122.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 356 SG REMARK 620 2 CYS E 359 N 73.3 REMARK 620 3 CYS E 359 SG 93.4 86.4 REMARK 620 4 CYS E 381 SG 78.8 108.5 31.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN E 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN E 402 DBREF 6WXK A 338 393 UNP Q9BUL5 PHF23_HUMAN 338 393 DBREF 6WXK B 338 393 UNP Q9BUL5 PHF23_HUMAN 338 393 DBREF 6WXK C 338 393 UNP Q9BUL5 PHF23_HUMAN 338 393 DBREF 6WXK D 338 393 UNP Q9BUL5 PHF23_HUMAN 338 393 DBREF 6WXK E 338 393 UNP Q9BUL5 PHF23_HUMAN 338 393 SEQADV 6WXK GLY A 333 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK PRO A 334 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK LEU A 335 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY A 336 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK SER A 337 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY B 333 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK PRO B 334 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK LEU B 335 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY B 336 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK SER B 337 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY C 333 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK PRO C 334 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK LEU C 335 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY C 336 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK SER C 337 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY D 333 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK PRO D 334 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK LEU D 335 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY D 336 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK SER D 337 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY E 333 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK PRO E 334 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK LEU E 335 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK GLY E 336 UNP Q9BUL5 EXPRESSION TAG SEQADV 6WXK SER E 337 UNP Q9BUL5 EXPRESSION TAG SEQRES 1 A 61 GLY PRO LEU GLY SER ASP LEU ILE THR CYS TYR CYS ARG SEQRES 2 A 61 LYS PRO PHE ALA GLY ARG PRO MET ILE GLU CYS SER LEU SEQRES 3 A 61 CYS GLY THR TRP ILE HIS LEU SER CYS ALA LYS ILE LYS SEQRES 4 A 61 LYS THR ASN VAL PRO ASP PHE PHE TYR CYS GLN LYS CYS SEQRES 5 A 61 LYS GLU LEU ARG PRO GLU ALA ARG ARG SEQRES 1 B 61 GLY PRO LEU GLY SER ASP LEU ILE THR CYS TYR CYS ARG SEQRES 2 B 61 LYS PRO PHE ALA GLY ARG PRO MET ILE GLU CYS SER LEU SEQRES 3 B 61 CYS GLY THR TRP ILE HIS LEU SER CYS ALA LYS ILE LYS SEQRES 4 B 61 LYS THR ASN VAL PRO ASP PHE PHE TYR CYS GLN LYS CYS SEQRES 5 B 61 LYS GLU LEU ARG PRO GLU ALA ARG ARG SEQRES 1 C 61 GLY PRO LEU GLY SER ASP LEU ILE THR CYS TYR CYS ARG SEQRES 2 C 61 LYS PRO PHE ALA GLY ARG PRO MET ILE GLU CYS SER LEU SEQRES 3 C 61 CYS GLY THR TRP ILE HIS LEU SER CYS ALA LYS ILE LYS SEQRES 4 C 61 LYS THR ASN VAL PRO ASP PHE PHE TYR CYS GLN LYS CYS SEQRES 5 C 61 LYS GLU LEU ARG PRO GLU ALA ARG ARG SEQRES 1 D 61 GLY PRO LEU GLY SER ASP LEU ILE THR CYS TYR CYS ARG SEQRES 2 D 61 LYS PRO PHE ALA GLY ARG PRO MET ILE GLU CYS SER LEU SEQRES 3 D 61 CYS GLY THR TRP ILE HIS LEU SER CYS ALA LYS ILE LYS SEQRES 4 D 61 LYS THR ASN VAL PRO ASP PHE PHE TYR CYS GLN LYS CYS SEQRES 5 D 61 LYS GLU LEU ARG PRO GLU ALA ARG ARG SEQRES 1 E 61 GLY PRO LEU GLY SER ASP LEU ILE THR CYS TYR CYS ARG SEQRES 2 E 61 LYS PRO PHE ALA GLY ARG PRO MET ILE GLU CYS SER LEU SEQRES 3 E 61 CYS GLY THR TRP ILE HIS LEU SER CYS ALA LYS ILE LYS SEQRES 4 E 61 LYS THR ASN VAL PRO ASP PHE PHE TYR CYS GLN LYS CYS SEQRES 5 E 61 LYS GLU LEU ARG PRO GLU ALA ARG ARG HET ZN A 401 1 HET ZN A 402 1 HET ZN B 401 1 HET ZN B 402 1 HET ZN C 401 1 HET ZN C 402 1 HET ZN D 401 1 HET ZN D 402 1 HET ZN E 401 1 HET ZN E 402 1 HETNAM ZN ZINC ION FORMUL 6 ZN 10(ZN 2+) HELIX 1 AA1 LEU B 365 LYS B 369 1 5 HELIX 2 AA2 LEU C 365 LYS C 369 1 5 HELIX 3 AA3 CYS C 381 LYS C 385 5 5 SHEET 1 AA1 3 TRP A 362 HIS A 364 0 SHEET 2 AA1 3 MET A 353 GLU A 355 -1 N ILE A 354 O ILE A 363 SHEET 3 AA1 3 LEU B 339 ILE B 340 -1 O ILE B 340 N MET A 353 SHEET 1 AA2 3 TRP B 362 HIS B 364 0 SHEET 2 AA2 3 MET B 353 GLU B 355 -1 N ILE B 354 O ILE B 363 SHEET 3 AA2 3 LEU C 339 ILE C 340 -1 O ILE C 340 N MET B 353 SHEET 1 AA3 3 TRP C 362 HIS C 364 0 SHEET 2 AA3 3 MET C 353 GLU C 355 -1 N ILE C 354 O ILE C 363 SHEET 3 AA3 3 LEU D 339 ILE D 340 -1 O ILE D 340 N MET C 353 SHEET 1 AA4 2 MET D 353 GLU D 355 0 SHEET 2 AA4 2 TRP D 362 HIS D 364 -1 O ILE D 363 N ILE D 354 SHEET 1 AA5 2 MET E 353 GLU E 355 0 SHEET 2 AA5 2 TRP E 362 HIS E 364 -1 O ILE E 363 N ILE E 354 SSBOND 1 CYS D 356 CYS D 359 1555 1555 2.88 SSBOND 2 CYS D 356 CYS D 381 1555 1555 2.69 SSBOND 3 CYS E 356 CYS E 381 1555 1555 2.89 LINK SG CYS A 342 ZN ZN A 401 1555 1555 2.83 LINK SG CYS A 359 ZN ZN A 402 1555 1555 2.02 LINK ND1 HIS A 364 ZN ZN A 401 1555 1555 2.27 LINK SG CYS A 367 ZN ZN A 401 1555 1555 2.89 LINK SG CYS A 381 ZN ZN A 402 1555 1555 2.81 LINK SG CYS B 342 ZN ZN B 401 1555 1555 2.31 LINK SG CYS B 344 ZN ZN B 401 1555 1555 2.36 LINK SG CYS B 356 ZN ZN B 402 1555 1555 2.38 LINK ND1 HIS B 364 ZN ZN B 401 1555 1555 2.08 LINK SG CYS B 367 ZN ZN B 401 1555 1555 2.27 LINK SG CYS B 381 ZN ZN B 402 1555 1555 2.51 LINK SG CYS B 384 ZN ZN B 402 1555 1555 2.23 LINK SG CYS C 342 ZN ZN C 401 1555 1555 2.24 LINK SG CYS C 344 ZN ZN C 401 1555 1555 2.32 LINK SG CYS C 356 ZN ZN C 402 1555 1555 2.38 LINK SG CYS C 359 ZN ZN C 402 1555 1555 2.24 LINK ND1 HIS C 364 ZN ZN C 401 1555 1555 2.02 LINK SG CYS C 367 ZN ZN C 401 1555 1555 2.26 LINK SG CYS C 381 ZN ZN C 402 1555 1555 2.21 LINK SG CYS C 384 ZN ZN C 402 1555 1555 2.29 LINK SG CYS D 342 ZN ZN D 401 1555 1555 2.54 LINK SG CYS D 344 ZN ZN D 401 1555 1555 2.61 LINK SG CYS D 356 ZN ZN D 402 1555 1555 2.56 LINK SG CYS D 359 ZN ZN D 402 1555 1555 1.98 LINK ND1 HIS D 364 ZN ZN D 401 1555 1555 2.00 LINK SG CYS D 367 ZN ZN D 401 1555 1555 2.38 LINK SG CYS D 381 ZN ZN D 402 1555 1555 2.37 LINK SG CYS E 342 ZN ZN E 401 1555 1555 2.23 LINK SG CYS E 344 ZN ZN E 401 1555 1555 2.11 LINK SG CYS E 356 ZN ZN E 402 1555 1555 2.30 LINK N CYS E 359 ZN ZN E 402 1555 1555 2.49 LINK SG CYS E 359 ZN ZN E 402 1555 1555 2.24 LINK ND1 HIS E 364 ZN ZN E 401 1555 1555 2.11 LINK SG CYS E 367 ZN ZN E 401 1555 1555 2.30 LINK SG CYS E 381 ZN ZN E 402 1555 1555 2.26 SITE 1 AC1 4 CYS A 342 CYS A 344 HIS A 364 CYS A 367 SITE 1 AC2 4 CYS A 356 CYS A 359 CYS A 381 CYS A 384 SITE 1 AC3 4 CYS B 342 CYS B 344 HIS B 364 CYS B 367 SITE 1 AC4 4 CYS B 356 CYS B 359 CYS B 381 CYS B 384 SITE 1 AC5 4 CYS C 342 CYS C 344 HIS C 364 CYS C 367 SITE 1 AC6 4 CYS C 356 CYS C 359 CYS C 381 CYS C 384 SITE 1 AC7 4 CYS D 342 CYS D 344 HIS D 364 CYS D 367 SITE 1 AC8 3 CYS D 356 CYS D 359 CYS D 381 SITE 1 AC9 4 CYS E 342 CYS E 344 HIS E 364 CYS E 367 SITE 1 AD1 4 CYS E 356 LEU E 358 CYS E 359 CYS E 381 CRYST1 66.916 66.916 151.048 90.00 90.00 90.00 P 41 21 2 40 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014944 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014944 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006620 0.00000