HEADER STRUCTURAL PROTEIN 15-MAY-20 6X08 TITLE NUP85-SEH1 FROM S. CEREVISIAE BOUND BY VHH-SAN2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPORIN SEH1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NUCLEAR PORE PROTEIN SEH1,SEC13 HOMOLOG 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NUCLEOPORIN NUP85; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: NUCLEAR PORE PROTEIN NUP85; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: VHH-SAN2; COMPND 13 CHAIN: K; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: SEH1, YGL100W; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 12 S288C); SOURCE 13 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 14 ORGANISM_TAXID: 559292; SOURCE 15 STRAIN: ATCC 204508 / S288C; SOURCE 16 GENE: NUP85, RAT9, YJR042W, J1624; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 21 ORGANISM_TAXID: 30538; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEOPORIN, NANOBODY, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.A.NORDEEN,T.U.SCHWARTZ REVDAT 3 18-OCT-23 6X08 1 REMARK REVDAT 2 16-DEC-20 6X08 1 JRNL REVDAT 1 09-DEC-20 6X08 0 JRNL AUTH S.A.NORDEEN,K.R.ANDERSEN,K.E.KNOCKENHAUER,J.R.INGRAM, JRNL AUTH 2 H.L.PLOEGH,T.U.SCHWARTZ JRNL TITL A NANOBODY SUITE FOR YEAST SCAFFOLD NUCLEOPORINS PROVIDES JRNL TITL 2 DETAILS OF THE NUCLEAR PORE COMPLEX STRUCTURE. JRNL REF NAT COMMUN V. 11 6179 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 33268786 JRNL DOI 10.1038/S41467-020-19884-6 REMARK 2 REMARK 2 RESOLUTION. 4.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18_3845 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 117.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 16995 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.313 REMARK 3 R VALUE (WORKING SET) : 0.311 REMARK 3 FREE R VALUE : 0.347 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1700 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1117.0000 - 9.6000 1.00 1406 156 0.2705 0.3170 REMARK 3 2 9.6000 - 7.6200 1.00 1315 146 0.2689 0.3112 REMARK 3 3 7.6200 - 6.6600 1.00 1280 143 0.3494 0.4098 REMARK 3 4 6.6500 - 6.0500 1.00 1270 141 0.3593 0.3999 REMARK 3 5 6.0500 - 5.6100 1.00 1278 141 0.3523 0.3315 REMARK 3 6 5.6100 - 5.2800 1.00 1265 141 0.3352 0.3757 REMARK 3 7 5.2800 - 5.0200 1.00 1261 140 0.3065 0.3229 REMARK 3 8 5.0200 - 4.8000 1.00 1238 138 0.3281 0.3433 REMARK 3 9 4.8000 - 4.6100 1.00 1253 140 0.3424 0.3407 REMARK 3 10 4.6100 - 4.4600 1.00 1257 138 0.3562 0.4171 REMARK 3 11 4.4600 - 4.3200 1.00 1232 138 0.3758 0.4546 REMARK 3 12 4.3200 - 4.1900 0.99 1240 138 0.3812 0.3838 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.669 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.806 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 176.2 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 207.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6969 REMARK 3 ANGLE : 0.949 9489 REMARK 3 CHIRALITY : 0.060 1082 REMARK 3 PLANARITY : 0.005 1221 REMARK 3 DIHEDRAL : 14.403 2410 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 64 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.3316 -89.8470 26.6026 REMARK 3 T TENSOR REMARK 3 T11: 1.5230 T22: 1.4015 REMARK 3 T33: 1.3876 T12: -0.2496 REMARK 3 T13: -0.1088 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 2.0607 L22: 4.7393 REMARK 3 L33: 4.5469 L12: 2.7213 REMARK 3 L13: -0.6847 L23: -2.2688 REMARK 3 S TENSOR REMARK 3 S11: 0.4532 S12: 0.0323 S13: -0.7270 REMARK 3 S21: -0.0113 S22: 0.0068 S23: 0.3531 REMARK 3 S31: 1.1839 S32: -1.3706 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.7481 -67.0929 23.5140 REMARK 3 T TENSOR REMARK 3 T11: 1.6213 T22: 1.5153 REMARK 3 T33: 1.8759 T12: -0.4381 REMARK 3 T13: 0.0502 T23: 0.0701 REMARK 3 L TENSOR REMARK 3 L11: 0.9455 L22: 0.8594 REMARK 3 L33: 3.5080 L12: 0.1781 REMARK 3 L13: -0.5618 L23: 1.6270 REMARK 3 S TENSOR REMARK 3 S11: 0.6003 S12: -0.3140 S13: 0.5758 REMARK 3 S21: 0.6420 S22: -0.4945 S23: 0.3368 REMARK 3 S31: -0.3684 S32: -1.0599 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.0552 -71.3390 -3.5522 REMARK 3 T TENSOR REMARK 3 T11: 2.7372 T22: 1.7921 REMARK 3 T33: 1.9974 T12: -1.7562 REMARK 3 T13: -0.1116 T23: 0.7563 REMARK 3 L TENSOR REMARK 3 L11: 4.0781 L22: 2.3614 REMARK 3 L33: 3.9856 L12: 1.7522 REMARK 3 L13: 0.3423 L23: 0.4856 REMARK 3 S TENSOR REMARK 3 S11: 1.7493 S12: -0.7004 S13: 1.6309 REMARK 3 S21: -1.3379 S22: 0.2640 S23: -1.9755 REMARK 3 S31: 0.7577 S32: -0.2285 S33: 2.5777 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.2651 -71.6697 -0.0761 REMARK 3 T TENSOR REMARK 3 T11: 4.4184 T22: 2.2063 REMARK 3 T33: 1.5031 T12: 0.3891 REMARK 3 T13: 0.5014 T23: 1.0700 REMARK 3 L TENSOR REMARK 3 L11: 1.0422 L22: 0.3077 REMARK 3 L33: 0.6766 L12: 0.0140 REMARK 3 L13: -0.5300 L23: -0.1640 REMARK 3 S TENSOR REMARK 3 S11: 0.5771 S12: 0.2402 S13: 0.4163 REMARK 3 S21: 0.2509 S22: 0.5761 S23: 0.4937 REMARK 3 S31: -0.4127 S32: -0.8771 S33: 4.1797 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 62 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.4371 -74.5348 8.6901 REMARK 3 T TENSOR REMARK 3 T11: 1.4365 T22: 1.6996 REMARK 3 T33: 3.6151 T12: -0.8268 REMARK 3 T13: -0.1157 T23: -0.3617 REMARK 3 L TENSOR REMARK 3 L11: 1.4302 L22: 0.2288 REMARK 3 L33: 1.8932 L12: -0.3398 REMARK 3 L13: -0.0849 L23: 0.5465 REMARK 3 S TENSOR REMARK 3 S11: -0.7335 S12: 0.2789 S13: -0.0626 REMARK 3 S21: 1.1162 S22: -1.1022 S23: 0.1775 REMARK 3 S31: -0.0965 S32: -0.8987 S33: -1.4557 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 71 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 63.1144 -78.9250 5.1538 REMARK 3 T TENSOR REMARK 3 T11: 1.8664 T22: 1.1386 REMARK 3 T33: 2.0153 T12: -0.5157 REMARK 3 T13: -0.0197 T23: -0.2054 REMARK 3 L TENSOR REMARK 3 L11: 1.2598 L22: 0.6892 REMARK 3 L33: 1.4197 L12: -0.3865 REMARK 3 L13: 0.1749 L23: 0.1157 REMARK 3 S TENSOR REMARK 3 S11: 2.0665 S12: -1.1777 S13: -0.5642 REMARK 3 S21: -1.7979 S22: -0.8459 S23: -1.0507 REMARK 3 S31: -1.0469 S32: 0.1514 S33: 0.2895 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 96 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 92.9026 -59.9015 4.3726 REMARK 3 T TENSOR REMARK 3 T11: 2.0607 T22: 1.3722 REMARK 3 T33: 1.6978 T12: -0.7155 REMARK 3 T13: 0.2712 T23: 0.2667 REMARK 3 L TENSOR REMARK 3 L11: 3.6373 L22: 4.1511 REMARK 3 L33: 2.4943 L12: 0.4224 REMARK 3 L13: -0.2846 L23: 0.9955 REMARK 3 S TENSOR REMARK 3 S11: 0.7212 S12: -0.2754 S13: -1.8231 REMARK 3 S21: -0.6744 S22: 0.8672 S23: -1.6666 REMARK 3 S31: 0.8408 S32: -1.0334 S33: 0.3224 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 139 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.7362 -58.0787 -4.4216 REMARK 3 T TENSOR REMARK 3 T11: 2.5233 T22: 1.8886 REMARK 3 T33: 1.4422 T12: -0.9245 REMARK 3 T13: 0.7130 T23: 0.6045 REMARK 3 L TENSOR REMARK 3 L11: 4.0882 L22: 2.9062 REMARK 3 L33: 1.0750 L12: -1.8159 REMARK 3 L13: -0.9992 L23: -0.6035 REMARK 3 S TENSOR REMARK 3 S11: 0.9658 S12: -1.1343 S13: 0.8936 REMARK 3 S21: 0.5713 S22: 0.2894 S23: -0.3406 REMARK 3 S31: 0.2603 S32: -1.4804 S33: 0.0393 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 165 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 90.4612 -49.4302 -8.4696 REMARK 3 T TENSOR REMARK 3 T11: 2.1479 T22: 1.4382 REMARK 3 T33: 1.4112 T12: -0.5401 REMARK 3 T13: 0.1050 T23: 0.3244 REMARK 3 L TENSOR REMARK 3 L11: 2.6743 L22: 4.1102 REMARK 3 L33: 3.0177 L12: -2.9851 REMARK 3 L13: -0.5641 L23: -0.8879 REMARK 3 S TENSOR REMARK 3 S11: -0.5992 S12: -0.5073 S13: 0.1980 REMARK 3 S21: 0.3708 S22: -0.4541 S23: 0.6656 REMARK 3 S31: -2.3143 S32: -1.2879 S33: -0.1099 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 214 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): 80.7209 -43.6122 -29.6749 REMARK 3 T TENSOR REMARK 3 T11: 1.5763 T22: 1.4758 REMARK 3 T33: 1.9429 T12: -0.6369 REMARK 3 T13: -0.4353 T23: -0.1304 REMARK 3 L TENSOR REMARK 3 L11: 0.1414 L22: 0.3412 REMARK 3 L33: 0.4823 L12: -0.1647 REMARK 3 L13: -0.1909 L23: -0.2343 REMARK 3 S TENSOR REMARK 3 S11: 0.7143 S12: -0.0931 S13: -0.4318 REMARK 3 S21: 1.1118 S22: -0.5805 S23: 1.4988 REMARK 3 S31: 1.8851 S32: -0.1889 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 255 THROUGH 367 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.5314 -32.6623 -28.1520 REMARK 3 T TENSOR REMARK 3 T11: 2.6140 T22: 1.5071 REMARK 3 T33: 1.6066 T12: -0.1807 REMARK 3 T13: -0.4093 T23: 0.3147 REMARK 3 L TENSOR REMARK 3 L11: 2.1919 L22: 4.9785 REMARK 3 L33: 3.0475 L12: 3.0791 REMARK 3 L13: -2.0390 L23: -1.9991 REMARK 3 S TENSOR REMARK 3 S11: -0.5015 S12: 0.6888 S13: 0.3007 REMARK 3 S21: -1.9381 S22: 1.2220 S23: 0.3490 REMARK 3 S31: -0.9618 S32: -1.0600 S33: 0.0061 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 368 THROUGH 402 ) REMARK 3 ORIGIN FOR THE GROUP (A): 80.6863 -38.6832 -7.0072 REMARK 3 T TENSOR REMARK 3 T11: 1.8626 T22: 1.0412 REMARK 3 T33: 1.0686 T12: -0.2909 REMARK 3 T13: 0.2439 T23: 0.1106 REMARK 3 L TENSOR REMARK 3 L11: 1.1713 L22: 0.9835 REMARK 3 L33: 2.2199 L12: -0.6085 REMARK 3 L13: -1.4095 L23: 1.5405 REMARK 3 S TENSOR REMARK 3 S11: -0.0215 S12: -0.1666 S13: -0.5288 REMARK 3 S21: 0.9690 S22: 0.5705 S23: -0.6365 REMARK 3 S31: -0.8495 S32: -2.2214 S33: 0.0473 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 403 THROUGH 531 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.5702 -65.6812 13.2131 REMARK 3 T TENSOR REMARK 3 T11: 1.8400 T22: 1.4716 REMARK 3 T33: 1.9017 T12: -0.6246 REMARK 3 T13: -0.4918 T23: 0.3846 REMARK 3 L TENSOR REMARK 3 L11: 2.3840 L22: 4.2410 REMARK 3 L33: 3.9390 L12: 3.0851 REMARK 3 L13: -1.3626 L23: -3.0589 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: -0.6128 S13: 0.0614 REMARK 3 S21: -1.0610 S22: 0.7283 S23: 0.2507 REMARK 3 S31: -0.3588 S32: -0.5040 S33: 0.0004 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 532 THROUGH 556 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.4244 -90.7887 18.9371 REMARK 3 T TENSOR REMARK 3 T11: 2.2835 T22: 2.8917 REMARK 3 T33: 0.2232 T12: 0.6615 REMARK 3 T13: 0.1650 T23: 0.5125 REMARK 3 L TENSOR REMARK 3 L11: 1.9704 L22: 4.7116 REMARK 3 L33: 2.3401 L12: -2.8893 REMARK 3 L13: 1.7348 L23: -3.3193 REMARK 3 S TENSOR REMARK 3 S11: 2.2403 S12: -1.9466 S13: -1.4391 REMARK 3 S21: 1.9957 S22: -0.4377 S23: 0.9810 REMARK 3 S31: -0.7143 S32: -0.2853 S33: 1.5348 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'K' AND (RESID 1 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.1755 -17.7705 -28.5744 REMARK 3 T TENSOR REMARK 3 T11: 2.7981 T22: 4.0930 REMARK 3 T33: 1.6578 T12: 0.1421 REMARK 3 T13: -0.5834 T23: 0.6120 REMARK 3 L TENSOR REMARK 3 L11: 5.6549 L22: 8.1031 REMARK 3 L33: 0.4663 L12: 6.0503 REMARK 3 L13: -1.5171 L23: -1.2311 REMARK 3 S TENSOR REMARK 3 S11: -0.0595 S12: 1.8584 S13: -3.5269 REMARK 3 S21: 2.0036 S22: -1.9258 S23: -2.0013 REMARK 3 S31: 1.7465 S32: -3.3051 S33: 0.0516 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'K' AND (RESID 52 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 64.7175 -23.0186 -25.1561 REMARK 3 T TENSOR REMARK 3 T11: 0.7786 T22: 0.0907 REMARK 3 T33: 2.0049 T12: 1.6944 REMARK 3 T13: -0.8919 T23: 2.0418 REMARK 3 L TENSOR REMARK 3 L11: -0.0383 L22: 1.7904 REMARK 3 L33: 0.1584 L12: -0.0763 REMARK 3 L13: -0.0998 L23: 0.1775 REMARK 3 S TENSOR REMARK 3 S11: -1.3360 S12: -2.4230 S13: -1.9149 REMARK 3 S21: 2.9695 S22: 1.3082 S23: 1.1702 REMARK 3 S31: 1.4251 S32: -1.0206 S33: -0.7568 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'K' AND (RESID 102 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.5900 -10.7570 -27.2648 REMARK 3 T TENSOR REMARK 3 T11: 4.2336 T22: 3.4076 REMARK 3 T33: 3.9279 T12: 1.7577 REMARK 3 T13: -0.7913 T23: 0.7834 REMARK 3 L TENSOR REMARK 3 L11: 5.2801 L22: 3.3947 REMARK 3 L33: 6.5397 L12: -1.9691 REMARK 3 L13: -3.5266 L23: -0.3904 REMARK 3 S TENSOR REMARK 3 S11: -1.2134 S12: 1.7118 S13: 1.9635 REMARK 3 S21: 0.4473 S22: -1.8874 S23: -2.8802 REMARK 3 S31: 1.5789 S32: -0.9695 S33: -7.1833 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6X08 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000249027. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17026 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.190 REMARK 200 RESOLUTION RANGE LOW (A) : 117.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 37.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.35 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3EWE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M AMMONIUM SULFATE, DI-SODIUM REMARK 280 SUCCINATE PH 5.5, AND THE ADDITION OF 4% 1-PROPANOL, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.47467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 92.94933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.47467 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 92.94933 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 46.47467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 92.94933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 46.47467 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 92.94933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 ALA A 253 REMARK 465 SER A 254 REMARK 465 GLU A 255 REMARK 465 GLU A 256 REMARK 465 SER A 257 REMARK 465 LEU A 258 REMARK 465 THR A 259 REMARK 465 ASN A 260 REMARK 465 SER A 261 REMARK 465 ASN A 262 REMARK 465 MET A 263 REMARK 465 PHE A 264 REMARK 465 ASP A 265 REMARK 465 ASN A 266 REMARK 465 SER A 267 REMARK 465 ALA A 268 REMARK 465 ASP A 269 REMARK 465 VAL A 270 REMARK 465 ASP A 271 REMARK 465 MET A 272 REMARK 465 ASP A 273 REMARK 465 ALA A 274 REMARK 465 GLN A 275 REMARK 465 GLY A 276 REMARK 465 ARG A 277 REMARK 465 SER A 278 REMARK 465 ASP A 279 REMARK 465 SER A 280 REMARK 465 ASN A 281 REMARK 465 THR A 282 REMARK 465 GLU A 283 REMARK 465 GLU A 284 REMARK 465 LYS A 285 REMARK 465 ALA A 286 REMARK 465 GLU A 287 REMARK 465 LEU A 288 REMARK 465 GLN A 289 REMARK 465 GLN A 348 REMARK 465 GLN A 349 REMARK 465 MET B -3 REMARK 465 ALA B -2 REMARK 465 ASP B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ILE B 3 REMARK 465 ASP B 4 REMARK 465 ASP B 5 REMARK 465 SER B 6 REMARK 465 ASN B 7 REMARK 465 ARG B 8 REMARK 465 LEU B 9 REMARK 465 LEU B 10 REMARK 465 MET B 11 REMARK 465 ASP B 12 REMARK 465 VAL B 13 REMARK 465 ASP B 14 REMARK 465 GLN B 15 REMARK 465 PHE B 16 REMARK 465 ASP B 17 REMARK 465 PHE B 18 REMARK 465 LEU B 19 REMARK 465 ASP B 20 REMARK 465 ASP B 21 REMARK 465 GLY B 22 REMARK 465 THR B 23 REMARK 465 ALA B 24 REMARK 465 GLN B 25 REMARK 465 LEU B 26 REMARK 465 SER B 27 REMARK 465 ASN B 28 REMARK 465 ASN B 29 REMARK 465 LYS B 30 REMARK 465 THR B 31 REMARK 465 ASP B 32 REMARK 465 GLU B 33 REMARK 465 GLU B 34 REMARK 465 GLU B 35 REMARK 465 GLN B 36 REMARK 465 LEU B 37 REMARK 465 TYR B 38 REMARK 465 LYS B 39 REMARK 465 ARG B 40 REMARK 465 ASP B 41 REMARK 465 PRO B 42 REMARK 465 VAL B 43 REMARK 465 SER B 44 REMARK 465 GLY B 45 REMARK 465 ALA B 46 REMARK 465 ASN B 125 REMARK 465 VAL B 126 REMARK 465 PRO B 127 REMARK 465 THR B 128 REMARK 465 ILE B 129 REMARK 465 GLY B 130 REMARK 465 VAL B 131 REMARK 465 LYS B 231 REMARK 465 ASP B 232 REMARK 465 SER B 233 REMARK 465 THR B 234 REMARK 465 ALA B 235 REMARK 465 GLY B 236 REMARK 465 LYS B 237 REMARK 465 LYS B 238 REMARK 465 VAL B 239 REMARK 465 ASN B 432 REMARK 465 ILE B 433 REMARK 465 PHE B 434 REMARK 465 GLU B 435 REMARK 465 GLY B 436 REMARK 465 GLU B 437 REMARK 465 LYS B 438 REMARK 465 ASN B 439 REMARK 465 SER B 440 REMARK 465 ASP B 441 REMARK 465 ASP B 442 REMARK 465 TYR B 443 REMARK 465 SER B 444 REMARK 465 ASN B 445 REMARK 465 GLU B 446 REMARK 465 ASP B 447 REMARK 465 ASN B 448 REMARK 465 GLU B 449 REMARK 465 MET B 450 REMARK 465 ALA B 557 REMARK 465 ASN B 558 REMARK 465 PHE B 559 REMARK 465 SER B 560 REMARK 465 ARG B 561 REMARK 465 ALA B 562 REMARK 465 GLY B 563 REMARK 465 LYS B 564 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 30 CG OD1 OD2 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 TRP A 51 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 51 CZ3 CH2 REMARK 470 ARG A 52 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 79 CG CD CE NZ REMARK 470 LYS A 108 CG CD CE NZ REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 HIS A 164 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 166 CG CD OE1 NE2 REMARK 470 ARG A 226 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 236 CG CD CE NZ REMARK 470 LYS A 244 CG CD CE NZ REMARK 470 LEU A 249 CG CD1 CD2 REMARK 470 SER A 250 OG REMARK 470 LEU A 252 CG CD1 CD2 REMARK 470 TYR A 335 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 59 CG CD OE1 OE2 REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 LYS B 64 CG CD CE NZ REMARK 470 ARG B 116 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 117 CG OD1 OD2 REMARK 470 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 124 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL B 132 CG1 CG2 REMARK 470 ASN B 135 CG OD1 ND2 REMARK 470 LYS B 138 CG CD CE NZ REMARK 470 HIS B 140 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 156 CG CD OE1 OE2 REMARK 470 CYS B 184 SG REMARK 470 ASN B 213 CG OD1 ND2 REMARK 470 GLU B 218 CG CD OE1 OE2 REMARK 470 GLU B 221 CG CD OE1 OE2 REMARK 470 GLU B 222 CG CD OE1 OE2 REMARK 470 PHE B 240 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 260 CG CD OE1 NE2 REMARK 470 ILE B 262 CG1 CG2 CD1 REMARK 470 CYS B 264 SG REMARK 470 ILE B 265 CG1 CG2 CD1 REMARK 470 GLU B 266 CG CD OE1 OE2 REMARK 470 ARG B 267 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 269 CG OD1 OD2 REMARK 470 LEU B 270 CG CD1 CD2 REMARK 470 LEU B 271 CG CD1 CD2 REMARK 470 LEU B 274 CG CD1 CD2 REMARK 470 ASP B 276 CG OD1 OD2 REMARK 470 THR B 277 OG1 CG2 REMARK 470 ILE B 289 CG1 CG2 CD1 REMARK 470 LEU B 291 CG CD1 CD2 REMARK 470 LYS B 293 CG CD CE NZ REMARK 470 GLN B 294 CG CD OE1 NE2 REMARK 470 LYS B 297 CG CD CE NZ REMARK 470 ARG B 304 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 330 CG OD1 OD2 REMARK 470 ASP B 334 CG OD1 OD2 REMARK 470 ARG B 344 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 345 CG CD CE NZ REMARK 470 LEU B 361 CG CD1 CD2 REMARK 470 LEU B 362 CG CD1 CD2 REMARK 470 TYR B 364 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE B 365 CG1 CG2 CD1 REMARK 470 LEU B 368 CG CD1 CD2 REMARK 470 LEU B 370 CG CD1 CD2 REMARK 470 GLU B 391 CG CD OE1 OE2 REMARK 470 CYS B 394 SG REMARK 470 VAL B 395 CG1 CG2 REMARK 470 ASP B 396 CG OD1 OD2 REMARK 470 ILE B 397 CG1 CG2 CD1 REMARK 470 ILE B 398 CG1 CG2 CD1 REMARK 470 LYS B 401 CG CD CE NZ REMARK 470 HIS B 403 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 406 CG CD1 CD2 REMARK 470 ILE B 430 CG1 CG2 CD1 REMARK 470 GLU B 431 CG CD OE1 OE2 REMARK 470 TYR B 457 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 458 CG CD NE CZ NH1 NH2 REMARK 470 MET B 461 CG SD CE REMARK 470 MET B 465 CG SD CE REMARK 470 GLN B 545 CG CD OE1 NE2 REMARK 470 MET B 546 CG SD CE REMARK 470 LEU B 547 CG CD1 CD2 REMARK 470 HIS B 550 CG ND1 CD2 CE1 NE2 REMARK 470 ASN B 551 CG OD1 ND2 REMARK 470 ILE B 552 CG1 CG2 CD1 REMARK 470 ILE B 553 CG1 CG2 CD1 REMARK 470 GLU B 554 CG CD OE1 OE2 REMARK 470 SER B 555 OG REMARK 470 ILE B 556 CG1 CG2 CD1 REMARK 470 GLN K 1 CG CD OE1 NE2 REMARK 470 PHE K 27 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS K 43 CG CD CE NZ REMARK 470 ARG K 53 CG CD NE CZ NH1 NH2 REMARK 470 ASN K 74 CG OD1 ND2 REMARK 470 GLU K 76 CG CD OE1 OE2 REMARK 470 ASN K 77 CG OD1 ND2 REMARK 470 ARG K 100 CG CD NE CZ NH1 NH2 REMARK 470 ARG K 102 CG CD NE CZ NH1 NH2 REMARK 470 TRP K 106 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP K 106 CZ3 CH2 REMARK 470 ARG K 109 CG CD NE CZ NH1 NH2 REMARK 470 LYS K 117 CG CD CE NZ REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 THR K 7 REMARK 475 GLY K 8 REMARK 475 GLY K 9 REMARK 475 GLY K 10 REMARK 475 LEU K 11 REMARK 475 VAL K 12 REMARK 475 GLN K 13 REMARK 475 PRO K 14 REMARK 475 GLY K 15 REMARK 475 GLY K 16 REMARK 475 SER K 17 REMARK 475 LEU K 18 REMARK 475 ARG K 19 REMARK 475 ALA K 23 REMARK 475 ALA K 24 REMARK 475 PHE K 37 REMARK 475 ARG K 38 REMARK 475 GLN K 39 REMARK 475 ALA K 40 REMARK 475 PRO K 41 REMARK 475 GLY K 42 REMARK 475 LYS K 43 REMARK 475 GLU K 44 REMARK 475 ARG K 45 REMARK 475 GLU K 46 REMARK 475 TYR K 60 REMARK 475 THR K 61 REMARK 475 ASP K 62 REMARK 475 SER K 63 REMARK 475 VAL K 64 REMARK 475 LYS K 65 REMARK 475 GLY K 66 REMARK 475 ARG K 67 REMARK 475 PHE K 68 REMARK 475 THR K 69 REMARK 475 LEU K 81 REMARK 475 GLN K 82 REMARK 475 MET K 83 REMARK 475 ASN K 84 REMARK 475 SER K 85 REMARK 475 LEU K 86 REMARK 475 LYS K 87 REMARK 475 PRO K 88 REMARK 475 GLU K 89 REMARK 475 ALA K 92 REMARK 475 VAL K 93 REMARK 475 TYR K 94 REMARK 475 TYR K 95 REMARK 475 CYS K 96 REMARK 475 ALA K 97 REMARK 475 ALA K 98 REMARK 475 ALA K 99 REMARK 475 GLY K 103 REMARK 475 THR K 104 REMARK 475 CYS K 105 REMARK 475 LEU K 107 REMARK 475 ASN K 108 REMARK 475 GLN K 120 REMARK 475 VAL K 121 REMARK 475 THR K 122 REMARK 475 VAL K 123 REMARK 475 SER K 124 REMARK 475 SER K 125 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 TRP K 106 N CA C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 255 OE2 GLU B 355 2.08 REMARK 500 O ASP A 30 ND1 HIS A 32 2.18 REMARK 500 O TYR B 464 OG SER B 468 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 270 N - CA - C ANGL. DEV. = 18.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 34.02 -82.23 REMARK 500 SER A 48 -60.02 -97.95 REMARK 500 SER A 50 81.68 -156.60 REMARK 500 SER A 94 -5.89 -140.54 REMARK 500 LEU A 123 95.51 -68.40 REMARK 500 PHE A 178 46.37 -105.37 REMARK 500 LEU A 188 -138.08 62.87 REMARK 500 SER A 213 -163.53 -160.46 REMARK 500 THR A 246 104.87 -163.36 REMARK 500 ASP A 325 1.00 -66.77 REMARK 500 THR A 346 169.57 68.73 REMARK 500 ASP B 63 70.78 57.01 REMARK 500 ARG B 122 -68.87 -129.86 REMARK 500 PHE B 136 -138.47 49.07 REMARK 500 ALA B 137 -168.25 -123.04 REMARK 500 GLU B 139 -123.74 54.97 REMARK 500 ILE B 191 -53.47 -141.76 REMARK 500 GLN B 195 -154.01 -78.29 REMARK 500 THR B 277 -137.81 -95.25 REMARK 500 SER B 319 76.19 -114.82 REMARK 500 TYR B 364 -81.81 -105.96 REMARK 500 LEU B 370 8.05 -63.55 REMARK 500 SER B 399 49.68 -91.68 REMARK 500 PHE B 455 24.14 -77.14 REMARK 500 ARG B 458 -134.54 -106.44 REMARK 500 VAL B 514 -14.62 -140.03 REMARK 500 HIS B 550 -165.49 -161.91 REMARK 500 ASN B 551 -74.92 -113.41 REMARK 500 LEU K 29 -135.52 65.56 REMARK 500 ASP K 30 -145.97 -108.89 REMARK 500 SER K 52 -71.79 -74.06 REMARK 500 ASN K 77 43.08 -93.64 REMARK 500 PRO K 88 -8.54 -59.64 REMARK 500 ALA K 98 -156.37 -164.83 REMARK 500 CYS K 105 -130.08 50.94 REMARK 500 TRP K 115 -142.88 -87.02 REMARK 500 REMARK 500 REMARK: NULL DBREF 6X08 A 1 349 UNP P53011 SEH1_YEAST 1 349 DBREF 6X08 B 1 564 UNP P46673 NUP85_YEAST 1 564 DBREF 6X08 K 1 125 PDB 6X08 6X08 1 125 SEQADV 6X08 GLY A -3 UNP P53011 EXPRESSION TAG SEQADV 6X08 PRO A -2 UNP P53011 EXPRESSION TAG SEQADV 6X08 GLY A -1 UNP P53011 EXPRESSION TAG SEQADV 6X08 SER A 0 UNP P53011 EXPRESSION TAG SEQADV 6X08 MET B -3 UNP P46673 EXPRESSION TAG SEQADV 6X08 ALA B -2 UNP P46673 EXPRESSION TAG SEQADV 6X08 ASP B -1 UNP P46673 EXPRESSION TAG SEQADV 6X08 PRO B 0 UNP P46673 EXPRESSION TAG SEQRES 1 A 353 GLY PRO GLY SER MET GLN PRO PHE ASP SER GLY HIS ASP SEQRES 2 A 353 ASP LEU VAL HIS ASP VAL VAL TYR ASP PHE TYR GLY ARG SEQRES 3 A 353 HIS VAL ALA THR CYS SER SER ASP GLN HIS ILE LYS VAL SEQRES 4 A 353 PHE LYS LEU ASP LYS ASP THR SER ASN TRP GLU LEU SER SEQRES 5 A 353 ASP SER TRP ARG ALA HIS ASP SER SER ILE VAL ALA ILE SEQRES 6 A 353 ASP TRP ALA SER PRO GLU TYR GLY ARG ILE ILE ALA SER SEQRES 7 A 353 ALA SER TYR ASP LYS THR VAL LYS LEU TRP GLU GLU ASP SEQRES 8 A 353 PRO ASP GLN GLU GLU CYS SER GLY ARG ARG TRP ASN LYS SEQRES 9 A 353 LEU CYS THR LEU ASN ASP SER LYS GLY SER LEU TYR SER SEQRES 10 A 353 VAL LYS PHE ALA PRO ALA HIS LEU GLY LEU LYS LEU ALA SEQRES 11 A 353 CYS LEU GLY ASN ASP GLY ILE LEU ARG LEU TYR ASP ALA SEQRES 12 A 353 LEU GLU PRO SER ASP LEU ARG SER TRP THR LEU THR SER SEQRES 13 A 353 GLU MET LYS VAL LEU SER ILE PRO PRO ALA ASN HIS LEU SEQRES 14 A 353 GLN SER ASP PHE CYS LEU SER TRP CYS PRO SER ARG PHE SEQRES 15 A 353 SER PRO GLU LYS LEU ALA VAL SER ALA LEU GLU GLN ALA SEQRES 16 A 353 ILE ILE TYR GLN ARG GLY LYS ASP GLY LYS LEU HIS VAL SEQRES 17 A 353 ALA ALA LYS LEU PRO GLY HIS LYS SER LEU ILE ARG SER SEQRES 18 A 353 ILE SER TRP ALA PRO SER ILE GLY ARG TRP TYR GLN LEU SEQRES 19 A 353 ILE ALA THR GLY CYS LYS ASP GLY ARG ILE ARG ILE PHE SEQRES 20 A 353 LYS ILE THR GLU LYS LEU SER PRO LEU ALA SER GLU GLU SEQRES 21 A 353 SER LEU THR ASN SER ASN MET PHE ASP ASN SER ALA ASP SEQRES 22 A 353 VAL ASP MET ASP ALA GLN GLY ARG SER ASP SER ASN THR SEQRES 23 A 353 GLU GLU LYS ALA GLU LEU GLN SER ASN LEU GLN VAL GLU SEQRES 24 A 353 LEU LEU SER GLU HIS ASP ASP HIS ASN GLY GLU VAL TRP SEQRES 25 A 353 SER VAL SER TRP ASN LEU THR GLY THR ILE LEU SER SER SEQRES 26 A 353 ALA GLY ASP ASP GLY LYS VAL ARG LEU TRP LYS ALA THR SEQRES 27 A 353 TYR SER ASN GLU PHE LYS CYS MET SER VAL ILE THR ALA SEQRES 28 A 353 GLN GLN SEQRES 1 B 568 MET ALA ASP PRO MET THR ILE ASP ASP SER ASN ARG LEU SEQRES 2 B 568 LEU MET ASP VAL ASP GLN PHE ASP PHE LEU ASP ASP GLY SEQRES 3 B 568 THR ALA GLN LEU SER ASN ASN LYS THR ASP GLU GLU GLU SEQRES 4 B 568 GLN LEU TYR LYS ARG ASP PRO VAL SER GLY ALA ILE LEU SEQRES 5 B 568 VAL PRO MET THR VAL ASN ASP GLN PRO ILE GLU LYS ASN SEQRES 6 B 568 GLY ASP LYS MET PRO LEU LYS PHE LYS LEU GLY PRO LEU SEQRES 7 B 568 SER TYR GLN ASN MET ALA PHE ILE THR ALA LYS ASP LYS SEQRES 8 B 568 TYR LYS LEU TYR PRO VAL ARG ILE PRO ARG LEU ASP THR SEQRES 9 B 568 SER LYS GLU PHE SER ALA TYR VAL SER GLY LEU PHE GLU SEQRES 10 B 568 ILE TYR ARG ASP LEU GLY ASP ASP ARG VAL PHE ASN VAL SEQRES 11 B 568 PRO THR ILE GLY VAL VAL ASN SER ASN PHE ALA LYS GLU SEQRES 12 B 568 HIS ASN ALA THR VAL ASN LEU ALA MET GLU ALA ILE LEU SEQRES 13 B 568 ASN GLU LEU GLU VAL PHE ILE GLY ARG VAL LYS ASP GLN SEQRES 14 B 568 ASP GLY ARG VAL ASN ARG PHE TYR GLU LEU GLU GLU SER SEQRES 15 B 568 LEU THR VAL LEU ASN CYS LEU ARG THR MET TYR PHE ILE SEQRES 16 B 568 LEU ASP GLY GLN ASP VAL GLU GLU ASN ARG SER GLU PHE SEQRES 17 B 568 ILE GLU SER LEU LEU ASN TRP ILE ASN ARG SER ASP GLY SEQRES 18 B 568 GLU PRO ASP GLU GLU TYR ILE GLU GLN VAL PHE SER VAL SEQRES 19 B 568 LYS ASP SER THR ALA GLY LYS LYS VAL PHE GLU THR GLN SEQRES 20 B 568 TYR PHE TRP LYS LEU LEU ASN GLN LEU VAL LEU ARG GLY SEQRES 21 B 568 LEU LEU SER GLN ALA ILE GLY CYS ILE GLU ARG SER ASP SEQRES 22 B 568 LEU LEU PRO TYR LEU SER ASP THR CYS ALA VAL SER PHE SEQRES 23 B 568 ASP ALA VAL SER ASP SER ILE GLU LEU LEU LYS GLN TYR SEQRES 24 B 568 PRO LYS ASP SER SER SER THR PHE ARG GLU TRP LYS ASN SEQRES 25 B 568 LEU VAL LEU LYS LEU SER GLN ALA PHE GLY SER SER ALA SEQRES 26 B 568 THR ASP ILE SER GLY GLU LEU ARG ASP TYR ILE GLU ASP SEQRES 27 B 568 PHE LEU LEU VAL ILE GLY GLY ASN GLN ARG LYS ILE LEU SEQRES 28 B 568 GLN TYR SER ARG THR TRP TYR GLU SER PHE CYS GLY PHE SEQRES 29 B 568 LEU LEU TYR TYR ILE PRO SER LEU GLU LEU SER ALA GLU SEQRES 30 B 568 TYR LEU GLN MET SER LEU GLU ALA ASN VAL VAL ASP ILE SEQRES 31 B 568 THR ASN ASP TRP GLU GLN PRO CYS VAL ASP ILE ILE SER SEQRES 32 B 568 GLY LYS ILE HIS SER ILE LEU PRO VAL MET GLU SER LEU SEQRES 33 B 568 ASP SER CYS THR ALA ALA PHE THR ALA MET ILE CYS GLU SEQRES 34 B 568 ALA LYS GLY LEU ILE GLU ASN ILE PHE GLU GLY GLU LYS SEQRES 35 B 568 ASN SER ASP ASP TYR SER ASN GLU ASP ASN GLU MET LEU SEQRES 36 B 568 GLU ASP LEU PHE SER TYR ARG ASN GLY MET ALA SER TYR SEQRES 37 B 568 MET LEU ASN SER PHE ALA PHE GLU LEU CYS SER LEU GLY SEQRES 38 B 568 ASP LYS GLU LEU TRP PRO VAL ALA ILE GLY LEU ILE ALA SEQRES 39 B 568 LEU SER ALA THR GLY THR ARG SER ALA LYS LYS MET VAL SEQRES 40 B 568 ILE ALA GLU LEU LEU PRO HIS TYR PRO PHE VAL THR ASN SEQRES 41 B 568 ASP ASP ILE GLU TRP MET LEU SER ILE CYS VAL GLU TRP SEQRES 42 B 568 ARG LEU PRO GLU ILE ALA LYS GLU ILE TYR THR THR LEU SEQRES 43 B 568 GLY ASN GLN MET LEU SER ALA HIS ASN ILE ILE GLU SER SEQRES 44 B 568 ILE ALA ASN PHE SER ARG ALA GLY LYS SEQRES 1 K 125 GLN VAL GLN LEU VAL GLU THR GLY GLY GLY LEU VAL GLN SEQRES 2 K 125 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 K 125 PHE THR LEU ASP ASP TYR ALA ILE GLY TRP PHE ARG GLN SEQRES 4 K 125 ALA PRO GLY LYS GLU ARG GLU GLY VAL SER CYS ILE SER SEQRES 5 K 125 ARG SER GLY GLY SER THR THR TYR THR ASP SER VAL LYS SEQRES 6 K 125 GLY ARG PHE THR ILE SER ARG ASP ASN ALA GLU ASN THR SEQRES 7 K 125 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 K 125 ALA VAL TYR TYR CYS ALA ALA ALA ARG THR ARG GLY THR SEQRES 9 K 125 CYS TRP LEU ASN ARG ILE GLY MET ASP TYR TRP GLY LYS SEQRES 10 K 125 GLY THR GLN VAL THR VAL SER SER HELIX 1 AA1 SER A 65 GLY A 69 5 5 HELIX 2 AA2 PRO A 118 GLY A 122 5 5 HELIX 3 AA3 SER B 101 GLY B 119 1 19 HELIX 4 AA4 GLU B 139 GLN B 165 1 27 HELIX 5 AA5 VAL B 169 PHE B 190 1 22 HELIX 6 AA6 ASP B 196 GLU B 199 5 4 HELIX 7 AA7 ASN B 200 ASP B 216 1 17 HELIX 8 AA8 ASP B 220 VAL B 230 1 11 HELIX 9 AA9 THR B 242 LEU B 254 1 13 HELIX 10 AB1 LEU B 257 SER B 268 1 12 HELIX 11 AB2 ASP B 269 THR B 277 1 9 HELIX 12 AB3 CYS B 278 GLN B 294 1 17 HELIX 13 AB4 SER B 299 SER B 319 1 21 HELIX 14 AB5 SER B 325 GLY B 341 1 17 HELIX 15 AB6 ASN B 342 TYR B 349 1 8 HELIX 16 AB7 THR B 352 TYR B 364 1 13 HELIX 17 AB8 SER B 367 GLU B 369 5 3 HELIX 18 AB9 LEU B 370 GLU B 380 1 11 HELIX 19 AC1 TRP B 390 SER B 399 1 10 HELIX 20 AC2 SER B 404 ASP B 413 1 10 HELIX 21 AC3 ASP B 413 LYS B 427 1 15 HELIX 22 AC4 MET B 461 SER B 475 1 15 HELIX 23 AC5 LEU B 481 LEU B 491 1 11 HELIX 24 AC6 THR B 496 LEU B 508 1 13 HELIX 25 AC7 PRO B 509 TYR B 511 5 3 HELIX 26 AC8 ASP B 518 TRP B 529 1 12 HELIX 27 AC9 LEU B 531 GLY B 543 1 13 HELIX 28 AD1 GLY B 543 ALA B 549 1 7 HELIX 29 AD2 LYS K 87 THR K 91 5 5 SHEET 1 AA1 4 PHE A 4 ASP A 5 0 SHEET 2 AA1 4 LYS B 89 PRO B 92 -1 O LEU B 90 N PHE A 4 SHEET 3 AA1 4 MET B 79 ILE B 82 -1 N ALA B 80 O TYR B 91 SHEET 4 AA1 4 LEU B 67 LYS B 70 -1 N LYS B 70 O MET B 79 SHEET 1 AA2 4 VAL A 12 TYR A 17 0 SHEET 2 AA2 4 HIS A 23 SER A 28 -1 O ALA A 25 N VAL A 16 SHEET 3 AA2 4 ILE A 33 LEU A 38 -1 O PHE A 36 N VAL A 24 SHEET 4 AA2 4 TRP A 45 ASP A 49 -1 O GLU A 46 N LYS A 37 SHEET 1 AA3 4 ILE A 58 TRP A 63 0 SHEET 2 AA3 4 ILE A 71 SER A 76 -1 O ALA A 75 N VAL A 59 SHEET 3 AA3 4 VAL A 81 GLU A 86 -1 O TRP A 84 N ILE A 72 SHEET 4 AA3 4 TRP A 98 LEU A 104 -1 O LEU A 101 N LEU A 83 SHEET 1 AA4 4 LEU A 111 PHE A 116 0 SHEET 2 AA4 4 LYS A 124 GLY A 129 -1 O LEU A 128 N TYR A 112 SHEET 3 AA4 4 ILE A 133 ALA A 139 -1 O ARG A 135 N CYS A 127 SHEET 4 AA4 4 TRP A 148 LYS A 155 -1 O THR A 151 N LEU A 136 SHEET 1 AA5 4 PHE A 169 TRP A 173 0 SHEET 2 AA5 4 LYS A 182 ALA A 187 -1 O SER A 186 N CYS A 170 SHEET 3 AA5 4 GLN A 190 ARG A 196 -1 O TYR A 194 N LEU A 183 SHEET 4 AA5 4 LEU A 202 LYS A 207 -1 O ALA A 205 N ILE A 193 SHEET 1 AA6 4 ILE A 215 ALA A 221 0 SHEET 2 AA6 4 GLN A 229 CYS A 235 -1 O GLY A 234 N SER A 217 SHEET 3 AA6 4 ILE A 240 ILE A 245 -1 O PHE A 243 N ILE A 231 SHEET 4 AA6 4 VAL A 294 HIS A 300 -1 O GLU A 295 N LYS A 244 SHEET 1 AA7 5 VAL A 307 TRP A 312 0 SHEET 2 AA7 5 LEU A 319 GLY A 323 -1 O SER A 320 N SER A 311 SHEET 3 AA7 5 VAL A 328 ALA A 333 -1 O ARG A 329 N SER A 321 SHEET 4 AA7 5 PHE A 339 ILE A 345 -1 O LYS A 340 N LYS A 332 SHEET 5 AA7 5 LEU B 48 VAL B 49 1 O VAL B 49 N VAL A 344 SHEET 1 AA8 4 GLU K 6 THR K 7 0 SHEET 2 AA8 4 LEU K 18 ALA K 23 -1 O SER K 21 N THR K 7 SHEET 3 AA8 4 THR K 78 MET K 83 -1 O MET K 83 N LEU K 18 SHEET 4 AA8 4 PHE K 68 ARG K 72 -1 N THR K 69 O GLN K 82 SHEET 1 AA9 6 GLY K 10 VAL K 12 0 SHEET 2 AA9 6 THR K 119 VAL K 123 1 O THR K 122 N VAL K 12 SHEET 3 AA9 6 ALA K 92 ALA K 97 -1 N ALA K 92 O VAL K 121 SHEET 4 AA9 6 GLY K 35 GLN K 39 -1 N PHE K 37 O TYR K 95 SHEET 5 AA9 6 ARG K 45 CYS K 50 -1 O GLU K 46 N ARG K 38 SHEET 6 AA9 6 THR K 59 TYR K 60 -1 O THR K 59 N CYS K 50 SSBOND 1 CYS K 22 CYS K 96 1555 1555 2.04 CRYST1 233.992 233.992 139.424 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004274 0.002467 0.000000 0.00000 SCALE2 0.000000 0.004935 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007172 0.00000