HEADER VIRAL PROTEIN 22-MAY-20 6X4I TITLE CRYSTAL STRUCTURE OF NSP15 ENDORIBONUCLEASE FROM SARS COV-2 IN THE TITLE 2 COMPLEX WITH 3'-URIDINEMONOPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: URIDYLATE-SPECIFIC ENDORIBONUCLEASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NSP15 ENDORIBNUCLEASE; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS SARS CORONA VIRUS 2, ENDORIBONUCLEASE, COVID-19, STRUCTURAL GENOMICS, KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, VIRAL KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,Y.KIM,N.MALTSEVA,R.JEDRZEJCZAK,M.ENDRES,K.MICHALSKA, AUTHOR 2 A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 5 18-OCT-23 6X4I 1 JRNL REVDAT 4 24-FEB-21 6X4I 1 JRNL REVDAT 3 09-DEC-20 6X4I 1 JRNL REVDAT 2 10-JUN-20 6X4I 1 COMPND SOURCE REMARK DBREF REVDAT 2 2 1 SEQADV SEQRES HELIX SHEET REVDAT 2 3 1 LINK SITE ATOM REVDAT 1 03-JUN-20 6X4I 0 JRNL AUTH Y.KIM,J.WOWER,N.MALTSEVA,C.CHANG,R.JEDRZEJCZAK,M.WILAMOWSKI, JRNL AUTH 2 S.KANG,V.NICOLAESCU,G.RANDALL,K.MICHALSKA,A.JOACHIMIAK JRNL TITL TIPIRACIL BINDS TO URIDINE SITE AND INHIBITS NSP15 JRNL TITL 2 ENDORIBONUCLEASE NENDOU FROM SARS-COV-2. JRNL REF COMMUN BIOL V. 4 193 2021 JRNL REFN ESSN 2399-3642 JRNL PMID 33564093 JRNL DOI 10.1038/S42003-021-01735-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.KIM,J.WOWER,N.MALTSEVA,C.CHANG,R.JEDRZEJCZAK,M.WILAMOWSKI, REMARK 1 AUTH 2 S.KANG,,N.NICOLAESCU,G.RANDALL,K.MICHALSKA,A.JOACHIMIAK, REMARK 1 AUTH 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES REMARK 1 AUTH 4 (CSGID) REMARK 1 TITL TIPIRACIL BINDS TO URIDINE SITE AND INHIBITS NSP15 REMARK 1 TITL 2 ENDORIBONUCLEASE NENDOU FROM SARS-COV-2 REMARK 1 REF BIORXIV 2020 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2020.06.26.173872 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 3 NUMBER OF REFLECTIONS : 114458 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 5676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.1900 - 5.7500 1.00 3994 199 0.1582 0.1765 REMARK 3 2 5.7500 - 4.5700 1.00 3948 192 0.1343 0.1469 REMARK 3 3 4.5600 - 3.9900 1.00 3912 206 0.1267 0.1289 REMARK 3 4 3.9900 - 3.6200 1.00 3934 189 0.1421 0.1767 REMARK 3 5 3.6200 - 3.3600 1.00 3933 163 0.1533 0.1699 REMARK 3 6 3.3600 - 3.1700 1.00 3907 211 0.1621 0.1806 REMARK 3 7 3.1700 - 3.0100 1.00 3895 197 0.1633 0.1914 REMARK 3 8 3.0100 - 2.8800 1.00 3898 193 0.1706 0.1871 REMARK 3 9 2.8800 - 2.7700 1.00 3924 196 0.1723 0.2033 REMARK 3 10 2.7700 - 2.6700 1.00 3897 203 0.1661 0.2031 REMARK 3 11 2.6700 - 2.5900 1.00 3865 216 0.1715 0.1981 REMARK 3 12 2.5900 - 2.5100 1.00 3867 205 0.1692 0.1962 REMARK 3 13 2.5100 - 2.4500 1.00 3881 211 0.1674 0.1902 REMARK 3 14 2.4500 - 2.3900 1.00 3890 213 0.1674 0.1998 REMARK 3 15 2.3900 - 2.3300 1.00 3859 205 0.1708 0.1864 REMARK 3 16 2.3300 - 2.2800 1.00 3870 234 0.1732 0.2184 REMARK 3 17 2.2800 - 2.2400 1.00 3820 244 0.1766 0.2055 REMARK 3 18 2.2400 - 2.2000 1.00 3898 196 0.1739 0.1858 REMARK 3 19 2.2000 - 2.1600 1.00 3887 182 0.1768 0.2120 REMARK 3 20 2.1600 - 2.1200 1.00 3924 188 0.1876 0.2142 REMARK 3 21 2.1200 - 2.0900 0.99 3870 184 0.1995 0.2274 REMARK 3 22 2.0900 - 2.0500 0.97 3753 220 0.2013 0.2111 REMARK 3 23 2.0500 - 2.0200 0.94 3663 163 0.1968 0.2253 REMARK 3 24 2.0200 - 1.9900 0.91 3493 218 0.2067 0.2247 REMARK 3 25 1.9900 - 1.9700 0.84 3237 176 0.2027 0.2370 REMARK 3 26 1.9700 - 1.9400 0.79 3055 169 0.2120 0.2417 REMARK 3 27 1.9400 - 1.9200 0.72 2770 160 0.2171 0.2505 REMARK 3 28 1.9200 - 1.8900 0.67 2579 140 0.2265 0.2664 REMARK 3 29 1.8900 - 1.8700 0.59 2340 108 0.2451 0.2869 REMARK 3 30 1.8700 - 1.8500 0.52 2019 95 0.2628 0.2654 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.280 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.8609 24.7317 -14.3724 REMARK 3 T TENSOR REMARK 3 T11: 0.0945 T22: 0.0786 REMARK 3 T33: 0.1540 T12: 0.0019 REMARK 3 T13: -0.0088 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 0.1310 L22: 0.0251 REMARK 3 L33: 0.1259 L12: 0.0285 REMARK 3 L13: 0.0477 L23: 0.0206 REMARK 3 S TENSOR REMARK 3 S11: 0.0317 S12: -0.0111 S13: -0.1495 REMARK 3 S21: 0.0106 S22: 0.0461 S23: -0.1654 REMARK 3 S31: 0.0013 S32: 0.0762 S33: 0.0332 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): -83.1326 22.8942 -37.3064 REMARK 3 T TENSOR REMARK 3 T11: 0.2187 T22: -0.0207 REMARK 3 T33: -0.0012 T12: 0.0012 REMARK 3 T13: -0.0603 T23: -0.1447 REMARK 3 L TENSOR REMARK 3 L11: 0.0302 L22: 0.0266 REMARK 3 L33: 0.0131 L12: -0.0147 REMARK 3 L13: -0.0008 L23: 0.0167 REMARK 3 S TENSOR REMARK 3 S11: 0.0367 S12: 0.1018 S13: -0.0484 REMARK 3 S21: -0.1683 S22: 0.0157 S23: -0.0372 REMARK 3 S31: -0.0412 S32: -0.0074 S33: 0.0413 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 277 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): -87.6306 15.7196 -31.4050 REMARK 3 T TENSOR REMARK 3 T11: 0.1637 T22: 0.1032 REMARK 3 T33: 0.1524 T12: 0.0138 REMARK 3 T13: -0.0382 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 0.0575 L22: 0.0293 REMARK 3 L33: 0.0123 L12: -0.0176 REMARK 3 L13: -0.0042 L23: -0.0108 REMARK 3 S TENSOR REMARK 3 S11: -0.0212 S12: 0.0359 S13: -0.1307 REMARK 3 S21: -0.0916 S22: 0.0184 S23: 0.0335 REMARK 3 S31: -0.0458 S32: -0.0393 S33: 0.0022 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -79.1992 19.9099 13.2170 REMARK 3 T TENSOR REMARK 3 T11: 0.1338 T22: 0.0758 REMARK 3 T33: 0.0934 T12: 0.0076 REMARK 3 T13: 0.0071 T23: 0.0331 REMARK 3 L TENSOR REMARK 3 L11: 0.0685 L22: 0.0551 REMARK 3 L33: 0.0542 L12: 0.0581 REMARK 3 L13: 0.0259 L23: -0.0035 REMARK 3 S TENSOR REMARK 3 S11: -0.0102 S12: -0.0042 S13: -0.0890 REMARK 3 S21: 0.0692 S22: 0.0251 S23: 0.0478 REMARK 3 S31: 0.0172 S32: -0.0586 S33: -0.0098 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 184 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): -63.7708 16.0531 27.0034 REMARK 3 T TENSOR REMARK 3 T11: 0.2346 T22: 0.1193 REMARK 3 T33: 0.2209 T12: 0.0109 REMARK 3 T13: -0.0365 T23: 0.0410 REMARK 3 L TENSOR REMARK 3 L11: 0.0035 L22: 0.0023 REMARK 3 L33: 0.0020 L12: 0.0041 REMARK 3 L13: -0.0019 L23: -0.0009 REMARK 3 S TENSOR REMARK 3 S11: 0.0172 S12: -0.0133 S13: -0.0599 REMARK 3 S21: 0.0186 S22: -0.0176 S23: -0.0264 REMARK 3 S31: 0.0027 S32: 0.0133 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 204 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.6268 33.6765 36.2000 REMARK 3 T TENSOR REMARK 3 T11: 0.3648 T22: 0.2103 REMARK 3 T33: 0.0018 T12: -0.0973 REMARK 3 T13: -0.1438 T23: 0.0556 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0183 REMARK 3 L33: 0.0306 L12: 0.0032 REMARK 3 L13: 0.0030 L23: 0.0226 REMARK 3 S TENSOR REMARK 3 S11: 0.0464 S12: -0.1496 S13: 0.0084 REMARK 3 S21: 0.1480 S22: 0.0046 S23: -0.0434 REMARK 3 S31: 0.0302 S32: 0.0118 S33: 0.0365 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 293 THROUGH 346 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.0232 21.9009 31.5467 REMARK 3 T TENSOR REMARK 3 T11: 0.2044 T22: 0.1472 REMARK 3 T33: 0.2077 T12: -0.0252 REMARK 3 T13: -0.1229 T23: 0.0500 REMARK 3 L TENSOR REMARK 3 L11: 0.0030 L22: 0.0338 REMARK 3 L33: 0.0298 L12: -0.0033 REMARK 3 L13: -0.0026 L23: 0.0325 REMARK 3 S TENSOR REMARK 3 S11: 0.0312 S12: -0.0146 S13: -0.0491 REMARK 3 S21: 0.0574 S22: 0.0454 S23: -0.0732 REMARK 3 S31: -0.0071 S32: 0.0531 S33: 0.0287 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6X4I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAY-20. REMARK 100 THE DEPOSITION ID IS D_1000249553. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 122922 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.14600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 1.58700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 6VWW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM CHLORIDE, 0.1M SODIUM REMARK 280 POTASSIUM PHOSPHATE, 10% PEG8000, PH 6.2, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 55.92900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.92900 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.92900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 32560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 82870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -75.47000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 130.71787 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -150.94000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 GLY A -13 REMARK 465 VAL A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 GLY A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 SER A -1 REMARK 465 MET B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 SER B -15 REMARK 465 SER B -14 REMARK 465 GLY B -13 REMARK 465 VAL B -12 REMARK 465 ASP B -11 REMARK 465 LEU B -10 REMARK 465 GLY B -9 REMARK 465 THR B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 SER B -1 REMARK 465 GLN B 347 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 0 CG OD1 ND2 REMARK 470 ASN B 0 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 -33.31 70.39 REMARK 500 SER A 2 107.16 -170.26 REMARK 500 ASN A 29 -111.33 53.69 REMARK 500 LEU A 249 65.73 62.72 REMARK 500 PHE A 342 114.95 -160.09 REMARK 500 SER B 2 109.69 -171.85 REMARK 500 ASN B 29 -128.03 57.28 REMARK 500 GLU B 203 42.90 -93.15 REMARK 500 LEU B 249 66.64 65.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 874 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 875 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH A 876 DISTANCE = 6.60 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 79 OD2 REMARK 620 2 HOH B 552 O 94.5 REMARK 620 3 HOH B 599 O 89.2 76.7 REMARK 620 4 HOH B 634 O 91.7 91.1 167.8 REMARK 620 5 HOH B 777 O 83.1 177.5 103.9 88.3 REMARK 620 6 HOH B 837 O 167.1 97.0 87.9 93.9 85.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U3P A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U3P B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6VWW RELATED DB: PDB REMARK 900 RELATED ID: 6W01 RELATED DB: PDB REMARK 900 RELATED ID: 6WLC RELATED DB: PDB REMARK 900 RELATED ID: 6WXC RELATED DB: PDB REMARK 900 RELATED ID: 6X1B RELATED DB: PDB REMARK 900 RELATED ID: CSGID-IDP52015 RELATED DB: TARGETTRACK DBREF 6X4I A 2 347 UNP P0DTD1 R1AB_SARS2 6453 6798 DBREF 6X4I B 2 347 UNP P0DTD1 R1AB_SARS2 6453 6798 SEQADV 6X4I MET A -22 UNP P0DTD1 INITIATING METHIONINE SEQADV 6X4I HIS A -21 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS A -20 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS A -19 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS A -18 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS A -17 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS A -16 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I SER A -15 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I SER A -14 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I GLY A -13 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I VAL A -12 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I ASP A -11 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I LEU A -10 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I GLY A -9 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I THR A -8 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I GLU A -7 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I ASN A -6 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I LEU A -5 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I TYR A -4 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I PHE A -3 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I GLN A -2 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I SER A -1 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I ASN A 0 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I MET A 1 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I MET B -22 UNP P0DTD1 INITIATING METHIONINE SEQADV 6X4I HIS B -21 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS B -20 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS B -19 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS B -18 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS B -17 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I HIS B -16 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I SER B -15 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I SER B -14 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I GLY B -13 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I VAL B -12 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I ASP B -11 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I LEU B -10 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I GLY B -9 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I THR B -8 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I GLU B -7 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I ASN B -6 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I LEU B -5 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I TYR B -4 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I PHE B -3 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I GLN B -2 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I SER B -1 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I ASN B 0 UNP P0DTD1 EXPRESSION TAG SEQADV 6X4I MET B 1 UNP P0DTD1 EXPRESSION TAG SEQRES 1 A 370 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 370 GLY THR GLU ASN LEU TYR PHE GLN SER ASN MET SER LEU SEQRES 3 A 370 GLU ASN VAL ALA PHE ASN VAL VAL ASN LYS GLY HIS PHE SEQRES 4 A 370 ASP GLY GLN GLN GLY GLU VAL PRO VAL SER ILE ILE ASN SEQRES 5 A 370 ASN THR VAL TYR THR LYS VAL ASP GLY VAL ASP VAL GLU SEQRES 6 A 370 LEU PHE GLU ASN LYS THR THR LEU PRO VAL ASN VAL ALA SEQRES 7 A 370 PHE GLU LEU TRP ALA LYS ARG ASN ILE LYS PRO VAL PRO SEQRES 8 A 370 GLU VAL LYS ILE LEU ASN ASN LEU GLY VAL ASP ILE ALA SEQRES 9 A 370 ALA ASN THR VAL ILE TRP ASP TYR LYS ARG ASP ALA PRO SEQRES 10 A 370 ALA HIS ILE SER THR ILE GLY VAL CYS SER MET THR ASP SEQRES 11 A 370 ILE ALA LYS LYS PRO THR GLU THR ILE CYS ALA PRO LEU SEQRES 12 A 370 THR VAL PHE PHE ASP GLY ARG VAL ASP GLY GLN VAL ASP SEQRES 13 A 370 LEU PHE ARG ASN ALA ARG ASN GLY VAL LEU ILE THR GLU SEQRES 14 A 370 GLY SER VAL LYS GLY LEU GLN PRO SER VAL GLY PRO LYS SEQRES 15 A 370 GLN ALA SER LEU ASN GLY VAL THR LEU ILE GLY GLU ALA SEQRES 16 A 370 VAL LYS THR GLN PHE ASN TYR TYR LYS LYS VAL ASP GLY SEQRES 17 A 370 VAL VAL GLN GLN LEU PRO GLU THR TYR PHE THR GLN SER SEQRES 18 A 370 ARG ASN LEU GLN GLU PHE LYS PRO ARG SER GLN MET GLU SEQRES 19 A 370 ILE ASP PHE LEU GLU LEU ALA MET ASP GLU PHE ILE GLU SEQRES 20 A 370 ARG TYR LYS LEU GLU GLY TYR ALA PHE GLU HIS ILE VAL SEQRES 21 A 370 TYR GLY ASP PHE SER HIS SER GLN LEU GLY GLY LEU HIS SEQRES 22 A 370 LEU LEU ILE GLY LEU ALA LYS ARG PHE LYS GLU SER PRO SEQRES 23 A 370 PHE GLU LEU GLU ASP PHE ILE PRO MET ASP SER THR VAL SEQRES 24 A 370 LYS ASN TYR PHE ILE THR ASP ALA GLN THR GLY SER SER SEQRES 25 A 370 LYS CYS VAL CYS SER VAL ILE ASP LEU LEU LEU ASP ASP SEQRES 26 A 370 PHE VAL GLU ILE ILE LYS SER GLN ASP LEU SER VAL VAL SEQRES 27 A 370 SER LYS VAL VAL LYS VAL THR ILE ASP TYR THR GLU ILE SEQRES 28 A 370 SER PHE MET LEU TRP CYS LYS ASP GLY HIS VAL GLU THR SEQRES 29 A 370 PHE TYR PRO LYS LEU GLN SEQRES 1 B 370 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 370 GLY THR GLU ASN LEU TYR PHE GLN SER ASN MET SER LEU SEQRES 3 B 370 GLU ASN VAL ALA PHE ASN VAL VAL ASN LYS GLY HIS PHE SEQRES 4 B 370 ASP GLY GLN GLN GLY GLU VAL PRO VAL SER ILE ILE ASN SEQRES 5 B 370 ASN THR VAL TYR THR LYS VAL ASP GLY VAL ASP VAL GLU SEQRES 6 B 370 LEU PHE GLU ASN LYS THR THR LEU PRO VAL ASN VAL ALA SEQRES 7 B 370 PHE GLU LEU TRP ALA LYS ARG ASN ILE LYS PRO VAL PRO SEQRES 8 B 370 GLU VAL LYS ILE LEU ASN ASN LEU GLY VAL ASP ILE ALA SEQRES 9 B 370 ALA ASN THR VAL ILE TRP ASP TYR LYS ARG ASP ALA PRO SEQRES 10 B 370 ALA HIS ILE SER THR ILE GLY VAL CYS SER MET THR ASP SEQRES 11 B 370 ILE ALA LYS LYS PRO THR GLU THR ILE CYS ALA PRO LEU SEQRES 12 B 370 THR VAL PHE PHE ASP GLY ARG VAL ASP GLY GLN VAL ASP SEQRES 13 B 370 LEU PHE ARG ASN ALA ARG ASN GLY VAL LEU ILE THR GLU SEQRES 14 B 370 GLY SER VAL LYS GLY LEU GLN PRO SER VAL GLY PRO LYS SEQRES 15 B 370 GLN ALA SER LEU ASN GLY VAL THR LEU ILE GLY GLU ALA SEQRES 16 B 370 VAL LYS THR GLN PHE ASN TYR TYR LYS LYS VAL ASP GLY SEQRES 17 B 370 VAL VAL GLN GLN LEU PRO GLU THR TYR PHE THR GLN SER SEQRES 18 B 370 ARG ASN LEU GLN GLU PHE LYS PRO ARG SER GLN MET GLU SEQRES 19 B 370 ILE ASP PHE LEU GLU LEU ALA MET ASP GLU PHE ILE GLU SEQRES 20 B 370 ARG TYR LYS LEU GLU GLY TYR ALA PHE GLU HIS ILE VAL SEQRES 21 B 370 TYR GLY ASP PHE SER HIS SER GLN LEU GLY GLY LEU HIS SEQRES 22 B 370 LEU LEU ILE GLY LEU ALA LYS ARG PHE LYS GLU SER PRO SEQRES 23 B 370 PHE GLU LEU GLU ASP PHE ILE PRO MET ASP SER THR VAL SEQRES 24 B 370 LYS ASN TYR PHE ILE THR ASP ALA GLN THR GLY SER SER SEQRES 25 B 370 LYS CYS VAL CYS SER VAL ILE ASP LEU LEU LEU ASP ASP SEQRES 26 B 370 PHE VAL GLU ILE ILE LYS SER GLN ASP LEU SER VAL VAL SEQRES 27 B 370 SER LYS VAL VAL LYS VAL THR ILE ASP TYR THR GLU ILE SEQRES 28 B 370 SER PHE MET LEU TRP CYS LYS ASP GLY HIS VAL GLU THR SEQRES 29 B 370 PHE TYR PRO LYS LEU GLN HET U3P A 401 21 HET EDO A 402 4 HET EDO A 403 4 HET EDO A 404 4 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET EDO A 409 4 HET EDO A 410 4 HET EDO A 411 4 HET EDO A 412 4 HET U3P B 401 21 HET NA B 402 1 HET EDO B 403 4 HET EDO B 404 4 HET EDO B 405 4 HET EDO B 406 4 HET EDO B 407 4 HET EDO B 408 4 HET EDO B 409 4 HET EDO B 410 4 HET EDO B 411 4 HETNAM U3P 3'-URIDINEMONOPHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 U3P 2(C9 H13 N2 O9 P) FORMUL 4 EDO 20(C2 H6 O2) FORMUL 16 NA NA 1+ FORMUL 26 HOH *718(H2 O) HELIX 1 AA1 SER A 2 GLY A 14 1 13 HELIX 2 AA2 PRO A 51 LYS A 61 1 11 HELIX 3 AA3 GLU A 69 LEU A 76 1 8 HELIX 4 AA4 GLU A 114 ALA A 118 5 5 HELIX 5 AA5 GLY A 130 ALA A 138 1 9 HELIX 6 AA6 SER A 208 LEU A 217 1 10 HELIX 7 AA7 ALA A 218 TYR A 226 1 9 HELIX 8 AA8 ALA A 232 VAL A 237 1 6 HELIX 9 AA9 LEU A 251 SER A 262 1 12 HELIX 10 AB1 LEU A 299 LYS A 308 1 10 HELIX 11 AB2 SER B 2 GLY B 14 1 13 HELIX 12 AB3 PRO B 51 LYS B 61 1 11 HELIX 13 AB4 GLU B 69 LEU B 76 1 8 HELIX 14 AB5 GLU B 114 ALA B 118 5 5 HELIX 15 AB6 GLY B 130 ALA B 138 1 9 HELIX 16 AB7 SER B 208 LEU B 217 1 10 HELIX 17 AB8 ALA B 218 TYR B 226 1 9 HELIX 18 AB9 ALA B 232 VAL B 237 1 6 HELIX 19 AC1 LEU B 251 SER B 262 1 12 HELIX 20 AC2 LEU B 299 SER B 309 1 11 SHEET 1 AA1 3 VAL A 25 ILE A 28 0 SHEET 2 AA1 3 THR A 31 VAL A 36 -1 O TYR A 33 N SER A 26 SHEET 3 AA1 3 VAL A 39 GLU A 45 -1 O LEU A 43 N VAL A 32 SHEET 1 AA2 5 ILE A 80 ALA A 81 0 SHEET 2 AA2 5 VAL A 122 ASP A 125 1 O PHE A 123 N ILE A 80 SHEET 3 AA2 5 GLY A 141 THR A 145 1 O VAL A 142 N PHE A 124 SHEET 4 AA2 5 ASN A 178 VAL A 183 -1 O ASN A 178 N THR A 145 SHEET 5 AA2 5 SER A 155 VAL A 156 -1 N SER A 155 O TYR A 179 SHEET 1 AA3 5 ILE A 80 ALA A 81 0 SHEET 2 AA3 5 VAL A 122 ASP A 125 1 O PHE A 123 N ILE A 80 SHEET 3 AA3 5 GLY A 141 THR A 145 1 O VAL A 142 N PHE A 124 SHEET 4 AA3 5 ASN A 178 VAL A 183 -1 O ASN A 178 N THR A 145 SHEET 5 AA3 5 VAL A 186 VAL A 187 -1 O VAL A 186 N VAL A 183 SHEET 1 AA4 2 TRP A 87 ASP A 88 0 SHEET 2 AA4 2 ALA A 93 PRO A 94 -1 O ALA A 93 N ASP A 88 SHEET 1 AA5 2 THR A 99 ILE A 100 0 SHEET 2 AA5 2 ASP A 107 ALA A 109 1 O ILE A 108 N THR A 99 SHEET 1 AA6 2 ALA A 161 LEU A 163 0 SHEET 2 AA6 2 VAL A 166 LEU A 168 -1 O VAL A 166 N LEU A 163 SHEET 1 AA7 3 PHE A 264 GLU A 267 0 SHEET 2 AA7 3 LYS A 277 ASP A 283 -1 O THR A 282 N GLU A 265 SHEET 3 AA7 3 SER A 289 VAL A 295 -1 O VAL A 295 N LYS A 277 SHEET 1 AA8 3 SER A 316 ILE A 323 0 SHEET 2 AA8 3 THR A 326 LYS A 335 -1 O PHE A 330 N VAL A 319 SHEET 3 AA8 3 HIS A 338 PRO A 344 -1 O GLU A 340 N TRP A 333 SHEET 1 AA9 3 VAL B 25 ILE B 28 0 SHEET 2 AA9 3 THR B 31 VAL B 36 -1 O TYR B 33 N SER B 26 SHEET 3 AA9 3 VAL B 39 GLU B 45 -1 O LEU B 43 N VAL B 32 SHEET 1 AB1 5 ILE B 80 ALA B 81 0 SHEET 2 AB1 5 VAL B 122 ASP B 125 1 O PHE B 123 N ILE B 80 SHEET 3 AB1 5 GLY B 141 THR B 145 1 O VAL B 142 N PHE B 124 SHEET 4 AB1 5 ASN B 178 VAL B 183 -1 O TYR B 180 N LEU B 143 SHEET 5 AB1 5 SER B 155 VAL B 156 -1 N SER B 155 O TYR B 179 SHEET 1 AB2 5 ILE B 80 ALA B 81 0 SHEET 2 AB2 5 VAL B 122 ASP B 125 1 O PHE B 123 N ILE B 80 SHEET 3 AB2 5 GLY B 141 THR B 145 1 O VAL B 142 N PHE B 124 SHEET 4 AB2 5 ASN B 178 VAL B 183 -1 O TYR B 180 N LEU B 143 SHEET 5 AB2 5 VAL B 186 GLN B 188 -1 O GLN B 188 N LYS B 181 SHEET 1 AB3 2 TRP B 87 ASP B 88 0 SHEET 2 AB3 2 ALA B 93 PRO B 94 -1 O ALA B 93 N ASP B 88 SHEET 1 AB4 2 THR B 99 ILE B 100 0 SHEET 2 AB4 2 ASP B 107 ALA B 109 1 O ILE B 108 N THR B 99 SHEET 1 AB5 2 ALA B 161 LEU B 163 0 SHEET 2 AB5 2 VAL B 166 LEU B 168 -1 O VAL B 166 N LEU B 163 SHEET 1 AB6 3 PHE B 264 GLU B 267 0 SHEET 2 AB6 3 LYS B 277 ASP B 283 -1 O THR B 282 N GLU B 265 SHEET 3 AB6 3 SER B 289 VAL B 295 -1 O VAL B 295 N LYS B 277 SHEET 1 AB7 3 SER B 316 ILE B 323 0 SHEET 2 AB7 3 THR B 326 LYS B 335 -1 O PHE B 330 N VAL B 319 SHEET 3 AB7 3 HIS B 338 PRO B 344 -1 O GLU B 340 N TRP B 333 LINK OD2 ASP B 79 NA NA B 402 1555 1555 2.49 LINK NA NA B 402 O HOH B 552 1555 1555 2.49 LINK NA NA B 402 O HOH B 599 1555 1555 2.57 LINK NA NA B 402 O HOH B 634 1555 1555 2.46 LINK NA NA B 402 O HOH B 777 1555 1555 2.44 LINK NA NA B 402 O HOH B 837 1555 1555 2.42 SITE 1 AC1 9 HIS A 235 GLY A 248 HIS A 250 LYS A 290 SITE 2 AC1 9 TRP A 333 THR A 341 TYR A 343 EDO A 402 SITE 3 AC1 9 HOH A 524 SITE 1 AC2 8 HIS A 250 VAL A 292 CYS A 293 SER A 294 SITE 2 AC2 8 TYR A 343 U3P A 401 EDO A 407 HOH A 652 SITE 1 AC3 6 LYS A 159 GLN A 160 PHE A 195 GLN A 197 SITE 2 AC3 6 HOH A 624 HOH A 707 SITE 1 AC4 9 LYS A 320 VAL A 321 THR A 322 GLU A 327 SITE 2 AC4 9 HOH A 641 VAL B 149 LYS B 150 GLY B 151 SITE 3 AC4 9 LEU B 152 SITE 1 AC5 3 HIS A 243 SER A 244 HOH A 634 SITE 1 AC6 4 GLU A 229 GLY A 230 GLY A 337 HIS A 338 SITE 1 AC7 6 ASN A 278 SER A 294 PRO A 344 LYS A 345 SITE 2 AC7 6 LEU A 346 EDO A 402 SITE 1 AC8 5 ASN A 75 LYS A 181 PRO A 191 TYR A 325 SITE 2 AC8 5 HOH A 516 SITE 1 AC9 5 LEU A 43 PHE A 44 GLU A 45 HOH A 533 SITE 2 AC9 5 HOH A 560 SITE 1 AD1 8 GLU A 4 PRO A 24 VAL A 25 ASN B 53 SITE 2 AD1 8 GLU B 57 CYS B 103 SER B 104 MET B 105 SITE 1 AD2 3 PRO A 191 GLU A 327 SER B 148 SITE 1 AD3 7 LEU A 312 SER A 313 VAL A 314 CYS A 334 SITE 2 AD3 7 LYS A 335 ASP A 336 GLY A 337 SITE 1 AD4 11 HIS B 235 GLY B 247 GLY B 248 HIS B 250 SITE 2 AD4 11 LYS B 290 TRP B 333 THR B 341 TYR B 343 SITE 3 AD4 11 EDO B 404 HOH B 512 HOH B 559 SITE 1 AD5 6 ASP B 79 HOH B 552 HOH B 599 HOH B 634 SITE 2 AD5 6 HOH B 777 HOH B 837 SITE 1 AD6 4 SER B 155 VAL B 156 GLU B 192 THR B 193 SITE 1 AD7 7 HIS B 250 VAL B 292 CYS B 293 SER B 294 SITE 2 AD7 7 TYR B 343 U3P B 401 HOH B 530 SITE 1 AD8 4 ASN B 278 SER B 294 LYS B 345 LEU B 346 SITE 1 AD9 6 GLU A 192 GLY B 126 GLY B 147 SER B 148 SITE 2 AD9 6 HOH B 625 HOH B 709 SITE 1 AE1 4 ASN B 74 VAL B 78 ASP B 79 HOH B 764 SITE 1 AE2 3 ASN B 75 TYR B 325 HOH B 508 SITE 1 AE3 5 PHE B 44 GLU B 45 HOH B 534 HOH B 571 SITE 2 AE3 5 HOH B 580 SITE 1 AE4 2 ARG B 258 THR B 286 SITE 1 AE5 5 GLU B 192 TYR B 194 THR B 322 HOH B 523 SITE 2 AE5 5 HOH B 535 CRYST1 150.940 150.940 111.858 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006625 0.003825 0.000000 0.00000 SCALE2 0.000000 0.007650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008940 0.00000