HEADER TOXIN, TRANSFERASE 29-MAY-20 6X6R TITLE CRYSTAL STRUCTURE OF C.DIFFICILE RIBOSYLTRANSFERASE CDTA IN COMPLEX TITLE 2 WITH PCL-PHENYLTHIODADMEIMMA CAVEAT 6X6R AR6 B 601 HAS WRONG CHIRALITY AT ATOM C1D COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIOIDES DIFFICILE; SOURCE 3 ORGANISM_TAXID: 1496; SOURCE 4 GENE: CDTA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ADP-RIBOSYLTRANSFERASE, TOXIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.POZHARSKI REVDAT 2 18-OCT-23 6X6R 1 REMARK REVDAT 1 13-OCT-21 6X6R 0 JRNL AUTH E.POZHARSKI JRNL TITL CRYSTAL STRUCTURE OF C.DIFFICILE RIBOSYLTRANSFERASE CDTA IN JRNL TITL 2 COMPLEX WITH PCL-PHENYLTHIODADMEIMMA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.36 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 63465 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 3089 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.04 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.44 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1270 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2404 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1210 REMARK 3 BIN R VALUE (WORKING SET) : 0.2397 REMARK 3 BIN FREE R VALUE : 0.2532 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.72 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 60 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6741 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 87 REMARK 3 SOLVENT ATOMS : 512 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.93750 REMARK 3 B22 (A**2) : 5.54580 REMARK 3 B33 (A**2) : 0.39170 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.22360 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.240 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.167 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.144 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.164 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.145 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7095 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9605 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2585 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1208 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7095 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 924 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 8558 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.09 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.55 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.18 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|5 - A|213 } REMARK 3 ORIGIN FOR THE GROUP (A): -7.9387 -41.5485 30.0918 REMARK 3 T TENSOR REMARK 3 T11: 0.0504 T22: -0.1429 REMARK 3 T33: -0.1034 T12: 0.1081 REMARK 3 T13: 0.0171 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.3032 L22: 0.9067 REMARK 3 L33: 1.6857 L12: 0.0158 REMARK 3 L13: 0.1092 L23: -0.1918 REMARK 3 S TENSOR REMARK 3 S11: -0.0634 S12: -0.0930 S13: -0.1501 REMARK 3 S21: -0.0308 S22: 0.0737 S23: -0.0234 REMARK 3 S31: 0.4747 S32: 0.2066 S33: -0.0103 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|214 - A|420 } REMARK 3 ORIGIN FOR THE GROUP (A): -0.5134 -15.8154 15.1107 REMARK 3 T TENSOR REMARK 3 T11: -0.1135 T22: 0.0147 REMARK 3 T33: -0.0468 T12: 0.0402 REMARK 3 T13: 0.0112 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.1733 L22: 1.6542 REMARK 3 L33: 0.9885 L12: -0.7767 REMARK 3 L13: 0.0064 L23: -0.1920 REMARK 3 S TENSOR REMARK 3 S11: 0.0880 S12: 0.2389 S13: 0.2223 REMARK 3 S21: -0.1804 S22: -0.0828 S23: -0.2000 REMARK 3 S31: 0.0308 S32: 0.3038 S33: -0.0052 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { B|6 - B|215 } REMARK 3 ORIGIN FOR THE GROUP (A): -37.6409 2.2227 19.6539 REMARK 3 T TENSOR REMARK 3 T11: -0.0621 T22: -0.1491 REMARK 3 T33: -0.0439 T12: 0.0259 REMARK 3 T13: -0.0033 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 1.2779 L22: 1.7307 REMARK 3 L33: 1.7218 L12: -0.2035 REMARK 3 L13: 0.0219 L23: -0.1273 REMARK 3 S TENSOR REMARK 3 S11: -0.0318 S12: -0.1004 S13: 0.2958 REMARK 3 S21: 0.0222 S22: -0.0330 S23: -0.0546 REMARK 3 S31: -0.1696 S32: -0.0888 S33: 0.0648 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { B|216 - B|420 } REMARK 3 ORIGIN FOR THE GROUP (A): -45.1984 -27.6341 17.3897 REMARK 3 T TENSOR REMARK 3 T11: -0.0003 T22: -0.0647 REMARK 3 T33: -0.0963 T12: -0.0697 REMARK 3 T13: 0.0132 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 0.8196 L22: 2.2109 REMARK 3 L33: 0.9752 L12: -0.1636 REMARK 3 L13: 0.3355 L23: -0.2558 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: -0.0329 S13: 0.0176 REMARK 3 S21: -0.0891 S22: -0.0331 S23: 0.1977 REMARK 3 S31: 0.1678 S32: -0.2170 S33: 0.0025 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6X6R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000249705. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63872 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 38.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6X41 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM SODIUM TARTRATE, REMARK 280 20%(W/V) PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 77.22100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.03300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 77.22100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.03300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 THR A 4 REMARK 465 VAL B 1 REMARK 465 ALA B 2 REMARK 465 ASN B 3 REMARK 465 THR B 4 REMARK 465 THR B 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 GLU B 21 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 17 -126.44 53.73 REMARK 500 ASP A 52 -64.28 -108.30 REMARK 500 ASP A 52 48.18 -140.48 REMARK 500 SER A 53 -60.36 59.04 REMARK 500 THR A 179 -104.90 65.70 REMARK 500 GLN A 188 -134.00 59.68 REMARK 500 LYS A 221 -125.97 51.94 REMARK 500 ASN A 273 65.26 -150.15 REMARK 500 LEU B 17 -127.26 54.39 REMARK 500 THR B 179 -104.44 65.69 REMARK 500 GLN B 188 -134.72 58.90 REMARK 500 LYS B 221 -125.37 53.67 REMARK 500 ASN B 273 69.98 -155.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4CT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4CT B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide AR6 B 601 and ARG B REMARK 800 40 DBREF 6X6R A 1 420 UNP F5B5W8 F5B5W8_CLODI 44 463 DBREF 6X6R B 1 420 UNP F5B5W8 F5B5W8_CLODI 44 463 SEQADV 6X6R ALA A 2 UNP F5B5W8 CYS 45 CONFLICT SEQADV 6X6R ALA B 2 UNP F5B5W8 CYS 45 CONFLICT SEQRES 1 A 420 VAL ALA ASN THR THR TYR LYS ALA PRO ILE GLU ARG PRO SEQRES 2 A 420 GLU ASP PHE LEU LYS ASP LYS GLU LYS ALA LYS GLU TRP SEQRES 3 A 420 GLU ARG LYS GLU ALA GLU ARG ILE GLU GLN LYS LEU GLU SEQRES 4 A 420 ARG SER GLU LYS GLU ALA LEU GLU SER TYR LYS LYS ASP SEQRES 5 A 420 SER VAL GLU ILE SER LYS TYR SER GLN THR ARG ASN TYR SEQRES 6 A 420 PHE TYR ASP TYR GLN ILE GLU ALA ASN SER ARG GLU LYS SEQRES 7 A 420 GLU TYR LYS GLU LEU ARG ASN ALA ILE SER LYS ASN LYS SEQRES 8 A 420 ILE ASP LYS PRO MET TYR VAL TYR TYR PHE GLU SER PRO SEQRES 9 A 420 GLU LYS PHE ALA PHE ASN LYS VAL ILE ARG THR GLU ASN SEQRES 10 A 420 GLN ASN GLU ILE SER LEU GLU LYS PHE ASN GLU PHE LYS SEQRES 11 A 420 GLU THR ILE GLN ASN LYS LEU PHE LYS GLN ASP GLY PHE SEQRES 12 A 420 LYS ASP ILE SER LEU TYR GLU PRO GLY LYS GLY ASP GLU SEQRES 13 A 420 LYS PRO THR PRO LEU LEU MET HIS LEU LYS LEU PRO ARG SEQRES 14 A 420 ASN THR GLY MET LEU PRO TYR THR ASN THR ASN ASN VAL SEQRES 15 A 420 SER THR LEU ILE GLU GLN GLY TYR SER ILE LYS ILE ASP SEQRES 16 A 420 LYS ILE VAL ARG ILE VAL ILE ASP GLY LYS HIS TYR ILE SEQRES 17 A 420 LYS ALA GLU ALA SER VAL VAL SER SER LEU ASP PHE LYS SEQRES 18 A 420 ASP ASP VAL SER LYS GLY ASP SER TRP GLY LYS ALA ASN SEQRES 19 A 420 TYR ASN ASP TRP SER ASN LYS LEU THR PRO ASN GLU LEU SEQRES 20 A 420 ALA ASP VAL ASN ASP TYR MET ARG GLY GLY TYR THR ALA SEQRES 21 A 420 ILE ASN ASN TYR LEU ILE SER ASN GLY PRO VAL ASN ASN SEQRES 22 A 420 PRO ASN PRO GLU LEU ASP SER LYS ILE THR ASN ILE GLU SEQRES 23 A 420 ASN ALA LEU LYS ARG GLU PRO ILE PRO THR ASN LEU THR SEQRES 24 A 420 VAL TYR ARG ARG SER GLY PRO GLN GLU PHE GLY LEU THR SEQRES 25 A 420 LEU THR SER PRO GLU TYR ASP PHE ASN LYS LEU GLU ASN SEQRES 26 A 420 ILE ASP ALA PHE LYS SER LYS TRP GLU GLY GLN ALA LEU SEQRES 27 A 420 SER TYR PRO ASN PHE ILE SER THR SER ILE GLY SER VAL SEQRES 28 A 420 ASN MET SER ALA PHE ALA LYS ARG LYS ILE VAL LEU ARG SEQRES 29 A 420 ILE THR ILE PRO LYS GLY SER PRO GLY ALA TYR LEU SER SEQRES 30 A 420 ALA ILE PRO GLY TYR ALA GLY GLU TYR GLU VAL LEU LEU SEQRES 31 A 420 ASN HIS GLY SER LYS PHE LYS ILE ASN LYS ILE ASP SER SEQRES 32 A 420 TYR LYS ASP GLY THR ILE THR LYS LEU ILE VAL ASP ALA SEQRES 33 A 420 THR LEU ILE PRO SEQRES 1 B 420 VAL ALA ASN THR THR TYR LYS ALA PRO ILE GLU ARG PRO SEQRES 2 B 420 GLU ASP PHE LEU LYS ASP LYS GLU LYS ALA LYS GLU TRP SEQRES 3 B 420 GLU ARG LYS GLU ALA GLU ARG ILE GLU GLN LYS LEU GLU SEQRES 4 B 420 ARG SER GLU LYS GLU ALA LEU GLU SER TYR LYS LYS ASP SEQRES 5 B 420 SER VAL GLU ILE SER LYS TYR SER GLN THR ARG ASN TYR SEQRES 6 B 420 PHE TYR ASP TYR GLN ILE GLU ALA ASN SER ARG GLU LYS SEQRES 7 B 420 GLU TYR LYS GLU LEU ARG ASN ALA ILE SER LYS ASN LYS SEQRES 8 B 420 ILE ASP LYS PRO MET TYR VAL TYR TYR PHE GLU SER PRO SEQRES 9 B 420 GLU LYS PHE ALA PHE ASN LYS VAL ILE ARG THR GLU ASN SEQRES 10 B 420 GLN ASN GLU ILE SER LEU GLU LYS PHE ASN GLU PHE LYS SEQRES 11 B 420 GLU THR ILE GLN ASN LYS LEU PHE LYS GLN ASP GLY PHE SEQRES 12 B 420 LYS ASP ILE SER LEU TYR GLU PRO GLY LYS GLY ASP GLU SEQRES 13 B 420 LYS PRO THR PRO LEU LEU MET HIS LEU LYS LEU PRO ARG SEQRES 14 B 420 ASN THR GLY MET LEU PRO TYR THR ASN THR ASN ASN VAL SEQRES 15 B 420 SER THR LEU ILE GLU GLN GLY TYR SER ILE LYS ILE ASP SEQRES 16 B 420 LYS ILE VAL ARG ILE VAL ILE ASP GLY LYS HIS TYR ILE SEQRES 17 B 420 LYS ALA GLU ALA SER VAL VAL SER SER LEU ASP PHE LYS SEQRES 18 B 420 ASP ASP VAL SER LYS GLY ASP SER TRP GLY LYS ALA ASN SEQRES 19 B 420 TYR ASN ASP TRP SER ASN LYS LEU THR PRO ASN GLU LEU SEQRES 20 B 420 ALA ASP VAL ASN ASP TYR MET ARG GLY GLY TYR THR ALA SEQRES 21 B 420 ILE ASN ASN TYR LEU ILE SER ASN GLY PRO VAL ASN ASN SEQRES 22 B 420 PRO ASN PRO GLU LEU ASP SER LYS ILE THR ASN ILE GLU SEQRES 23 B 420 ASN ALA LEU LYS ARG GLU PRO ILE PRO THR ASN LEU THR SEQRES 24 B 420 VAL TYR ARG ARG SER GLY PRO GLN GLU PHE GLY LEU THR SEQRES 25 B 420 LEU THR SER PRO GLU TYR ASP PHE ASN LYS LEU GLU ASN SEQRES 26 B 420 ILE ASP ALA PHE LYS SER LYS TRP GLU GLY GLN ALA LEU SEQRES 27 B 420 SER TYR PRO ASN PHE ILE SER THR SER ILE GLY SER VAL SEQRES 28 B 420 ASN MET SER ALA PHE ALA LYS ARG LYS ILE VAL LEU ARG SEQRES 29 B 420 ILE THR ILE PRO LYS GLY SER PRO GLY ALA TYR LEU SER SEQRES 30 B 420 ALA ILE PRO GLY TYR ALA GLY GLU TYR GLU VAL LEU LEU SEQRES 31 B 420 ASN HIS GLY SER LYS PHE LYS ILE ASN LYS ILE ASP SER SEQRES 32 B 420 TYR LYS ASP GLY THR ILE THR LYS LEU ILE VAL ASP ALA SEQRES 33 B 420 THR LEU ILE PRO HET 4CT A 501 26 HET AR6 B 601 35 HET 4CT B 602 26 HETNAM 4CT (3R,4S)-1-[(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL) HETNAM 2 4CT METHYL]-4-{[(4-CHLOROPHENYL) HETNAM 3 4CT SULFANYL]METHYL}PYRROLIDIN-3-OL HETNAM AR6 [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY- HETNAM 2 AR6 OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5- HETNAM 3 AR6 TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN HETNAM 4 AR6 PHOSPHATE HETSYN AR6 ADENOSINE-5-DIPHOSPHORIBOSE FORMUL 3 4CT 2(C18 H20 CL N5 O S) FORMUL 4 AR6 C15 H23 N5 O14 P2 FORMUL 6 HOH *512(H2 O) HELIX 1 AA1 ASP A 19 GLN A 36 1 18 HELIX 2 AA2 GLU A 39 SER A 53 1 15 HELIX 3 AA3 SER A 53 ARG A 63 1 11 HELIX 4 AA4 ASN A 64 PHE A 66 5 3 HELIX 5 AA5 TYR A 67 ASN A 74 1 8 HELIX 6 AA6 ARG A 76 LYS A 89 1 14 HELIX 7 AA7 SER A 103 ALA A 108 5 6 HELIX 8 AA8 SER A 122 GLN A 134 1 13 HELIX 9 AA9 ASP A 223 ASN A 236 1 14 HELIX 10 AB1 TRP A 238 LEU A 242 5 5 HELIX 11 AB2 THR A 243 ARG A 255 1 13 HELIX 12 AB3 GLY A 257 SER A 267 1 11 HELIX 13 AB4 ASN A 268 ASN A 273 1 6 HELIX 14 AB5 ASN A 275 GLU A 292 1 18 HELIX 15 AB6 GLY A 305 GLY A 310 5 6 HELIX 16 AB7 SER A 315 ASP A 319 5 5 HELIX 17 AB8 LYS A 322 GLU A 334 1 13 HELIX 18 AB9 MET A 353 ALA A 357 5 5 HELIX 19 AC1 SER A 377 ILE A 379 5 3 HELIX 20 AC2 ASP B 19 GLN B 36 1 18 HELIX 21 AC3 GLU B 39 ARG B 63 1 25 HELIX 22 AC4 ASN B 64 PHE B 66 5 3 HELIX 23 AC5 TYR B 67 ASN B 74 1 8 HELIX 24 AC6 ARG B 76 LYS B 89 1 14 HELIX 25 AC7 SER B 103 ALA B 108 5 6 HELIX 26 AC8 SER B 122 GLN B 134 1 13 HELIX 27 AC9 ASP B 223 ASN B 236 1 14 HELIX 28 AD1 TRP B 238 LEU B 242 5 5 HELIX 29 AD2 THR B 243 ARG B 255 1 13 HELIX 30 AD3 GLY B 257 SER B 267 1 11 HELIX 31 AD4 ASN B 268 ASN B 273 1 6 HELIX 32 AD5 ASN B 275 GLU B 292 1 18 HELIX 33 AD6 GLY B 305 GLY B 310 5 6 HELIX 34 AD7 SER B 315 ASP B 319 5 5 HELIX 35 AD8 LYS B 322 GLU B 334 1 13 HELIX 36 AD9 MET B 353 ALA B 357 5 5 HELIX 37 AE1 SER B 377 ILE B 379 5 3 SHEET 1 AA1 5 MET A 96 GLU A 102 0 SHEET 2 AA1 5 LEU A 161 LEU A 167 -1 O MET A 163 N TYR A 100 SHEET 3 AA1 5 LYS A 205 VAL A 215 1 O ILE A 208 N LEU A 162 SHEET 4 AA1 5 ASN A 181 ILE A 202 -1 N VAL A 198 O LYS A 209 SHEET 5 AA1 5 LEU A 137 ILE A 146 -1 N GLN A 140 O TYR A 190 SHEET 1 AA2 5 MET A 96 GLU A 102 0 SHEET 2 AA2 5 LEU A 161 LEU A 167 -1 O MET A 163 N TYR A 100 SHEET 3 AA2 5 LYS A 205 VAL A 215 1 O ILE A 208 N LEU A 162 SHEET 4 AA2 5 ASN A 181 ILE A 202 -1 N VAL A 198 O LYS A 209 SHEET 5 AA2 5 LEU A 174 ASN A 178 -1 N LEU A 174 O LEU A 185 SHEET 1 AA3 5 LEU A 298 SER A 304 0 SHEET 2 AA3 5 ILE A 361 ILE A 367 -1 O LEU A 363 N ARG A 302 SHEET 3 AA3 5 ILE A 409 ILE A 419 1 O VAL A 414 N VAL A 362 SHEET 4 AA3 5 LYS A 395 ASP A 406 -1 N ASP A 406 O ILE A 409 SHEET 5 AA3 5 ALA A 337 SER A 339 -1 N LEU A 338 O PHE A 396 SHEET 1 AA4 3 ILE A 344 SER A 347 0 SHEET 2 AA4 3 GLU A 387 LEU A 390 -1 O LEU A 390 N ILE A 344 SHEET 3 AA4 3 ALA A 374 TYR A 375 -1 N ALA A 374 O LEU A 389 SHEET 1 AA5 5 MET B 96 GLU B 102 0 SHEET 2 AA5 5 LEU B 161 LEU B 167 -1 O MET B 163 N TYR B 100 SHEET 3 AA5 5 LYS B 205 VAL B 215 1 O ILE B 208 N LEU B 162 SHEET 4 AA5 5 ASN B 181 ILE B 202 -1 N VAL B 198 O LYS B 209 SHEET 5 AA5 5 LEU B 137 ILE B 146 -1 N GLN B 140 O TYR B 190 SHEET 1 AA6 5 MET B 96 GLU B 102 0 SHEET 2 AA6 5 LEU B 161 LEU B 167 -1 O MET B 163 N TYR B 100 SHEET 3 AA6 5 LYS B 205 VAL B 215 1 O ILE B 208 N LEU B 162 SHEET 4 AA6 5 ASN B 181 ILE B 202 -1 N VAL B 198 O LYS B 209 SHEET 5 AA6 5 LEU B 174 ASN B 178 -1 N LEU B 174 O LEU B 185 SHEET 1 AA7 5 LEU B 298 SER B 304 0 SHEET 2 AA7 5 ILE B 361 ILE B 367 -1 O ILE B 367 N LEU B 298 SHEET 3 AA7 5 ILE B 409 ILE B 419 1 O LEU B 412 N VAL B 362 SHEET 4 AA7 5 LYS B 395 ASP B 406 -1 N ASP B 406 O ILE B 409 SHEET 5 AA7 5 ALA B 337 SER B 339 -1 N LEU B 338 O PHE B 396 SHEET 1 AA8 3 ILE B 344 SER B 347 0 SHEET 2 AA8 3 GLU B 387 LEU B 390 -1 O LEU B 390 N ILE B 344 SHEET 3 AA8 3 ALA B 374 TYR B 375 -1 N ALA B 374 O LEU B 389 LINK NH2 ARG B 40 C1D AR6 B 601 1555 1555 1.28 SITE 1 AC1 13 TYR A 301 ARG A 302 ARG A 303 SER A 345 SITE 2 AC1 13 SER A 347 MET A 353 PHE A 356 ARG A 359 SITE 3 AC1 13 GLY A 384 GLU A 385 TYR A 386 GLU A 387 SITE 4 AC1 13 HOH A 699 SITE 1 AC2 18 GLU B 44 GLU B 47 SER B 48 LYS B 51 SITE 2 AC2 18 TYR B 301 ARG B 302 ARG B 303 SER B 345 SITE 3 AC2 18 THR B 346 SER B 347 PHE B 356 ARG B 359 SITE 4 AC2 18 GLY B 384 GLU B 385 GLU B 387 AR6 B 601 SITE 5 AC2 18 HOH B 764 HOH B 812 SITE 1 AC3 25 GLU B 39 SER B 41 GLU B 42 LYS B 43 SITE 2 AC3 25 GLU B 44 TYR B 258 ILE B 266 ARG B 302 SITE 3 AC3 25 GLY B 305 GLN B 307 GLU B 308 TYR B 340 SITE 4 AC3 25 ASN B 342 SER B 345 ALA B 355 PHE B 356 SITE 5 AC3 25 ARG B 359 4CT B 602 HOH B 706 HOH B 735 SITE 6 AC3 25 HOH B 770 HOH B 816 HOH B 886 HOH B 892 SITE 7 AC3 25 HOH B 898 CRYST1 154.442 76.066 100.227 90.00 122.10 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006475 0.000000 0.004062 0.00000 SCALE2 0.000000 0.013146 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011778 0.00000