HEADER HYDROLASE 03-JUN-20 6X9Y TITLE THE CRYSTAL STRUCTURE OF A BETA-LACTAMASE FROM ESCHERICHIA COLI CFT073 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O6:H1 (STRAIN CFT073 / ATCC SOURCE 3 700928 / UPEC); SOURCE 4 ORGANISM_TAXID: 199310; SOURCE 5 STRAIN: CFT073 / ATCC 700928 / UPEC; SOURCE 6 GENE: AMPC, C5238; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-LACTAMASE, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS KEYWDS 2 OF INFECTIOUS DISEASES, CSGID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,R.WU,M.ENDRES,A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 2 INFECTIOUS DISEASES (CSGID) REVDAT 2 06-MAR-24 6X9Y 1 REMARK REVDAT 1 17-JUN-20 6X9Y 0 JRNL AUTH K.TAN,R.WU,M.ENDRES,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL THE CRYSTAL STRUCTURE OF A BETA-LACTAMASE FROM ESCHERICHIA JRNL TITL 2 COLI CFT073 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 68115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 3325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6000 - 5.4674 1.00 2773 148 0.1456 0.1585 REMARK 3 2 5.4674 - 4.3406 1.00 2748 150 0.1317 0.1851 REMARK 3 3 4.3406 - 3.7922 1.00 2733 148 0.1408 0.1742 REMARK 3 4 3.7922 - 3.4456 1.00 2729 127 0.1545 0.1839 REMARK 3 5 3.4456 - 3.1987 1.00 2720 152 0.1826 0.2029 REMARK 3 6 3.1987 - 3.0101 1.00 2737 132 0.1771 0.2133 REMARK 3 7 3.0101 - 2.8594 1.00 2738 120 0.1835 0.2495 REMARK 3 8 2.8594 - 2.7349 1.00 2692 140 0.1825 0.2188 REMARK 3 9 2.7349 - 2.6296 1.00 2722 152 0.1774 0.2255 REMARK 3 10 2.6296 - 2.5389 1.00 2753 111 0.1742 0.2304 REMARK 3 11 2.5389 - 2.4595 1.00 2710 131 0.1665 0.2042 REMARK 3 12 2.4595 - 2.3892 1.00 2710 127 0.1675 0.1773 REMARK 3 13 2.3892 - 2.3263 1.00 2697 143 0.1651 0.1913 REMARK 3 14 2.3263 - 2.2696 1.00 2732 145 0.1593 0.2212 REMARK 3 15 2.2696 - 2.2180 1.00 2699 156 0.1571 0.1932 REMARK 3 16 2.2180 - 2.1708 1.00 2686 126 0.1557 0.2082 REMARK 3 17 2.1708 - 2.1274 1.00 2741 134 0.1603 0.2035 REMARK 3 18 2.1274 - 2.0872 1.00 2723 118 0.1655 0.2033 REMARK 3 19 2.0872 - 2.0499 1.00 2671 173 0.1682 0.2549 REMARK 3 20 2.0499 - 2.0152 1.00 2721 136 0.1721 0.2123 REMARK 3 21 2.0152 - 1.9827 1.00 2699 144 0.1857 0.2135 REMARK 3 22 1.9827 - 1.9522 1.00 2689 141 0.1840 0.2320 REMARK 3 23 1.9522 - 1.9235 1.00 2702 134 0.1995 0.2808 REMARK 3 24 1.9235 - 1.9000 0.84 2265 137 0.2165 0.2710 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.179 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.176 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.57 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 5813 REMARK 3 ANGLE : 1.154 7939 REMARK 3 CHIRALITY : 0.074 860 REMARK 3 PLANARITY : 0.008 1014 REMARK 3 DIHEDRAL : 13.852 3404 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3754 -46.8370 16.8822 REMARK 3 T TENSOR REMARK 3 T11: 0.3661 T22: 0.5757 REMARK 3 T33: 0.6969 T12: 0.0010 REMARK 3 T13: -0.1878 T23: -0.0417 REMARK 3 L TENSOR REMARK 3 L11: 3.7683 L22: 3.2797 REMARK 3 L33: 8.2140 L12: 1.2166 REMARK 3 L13: 0.8511 L23: 5.0779 REMARK 3 S TENSOR REMARK 3 S11: -0.2727 S12: -0.6898 S13: 0.3762 REMARK 3 S21: 1.0542 S22: 0.6742 S23: -1.5400 REMARK 3 S31: -0.1303 S32: 0.8207 S33: -0.3728 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6038 -44.1948 -2.8783 REMARK 3 T TENSOR REMARK 3 T11: 0.2770 T22: 0.2610 REMARK 3 T33: 0.3076 T12: 0.0015 REMARK 3 T13: 0.0915 T23: 0.0613 REMARK 3 L TENSOR REMARK 3 L11: 2.8458 L22: 2.3285 REMARK 3 L33: 0.6099 L12: -1.3758 REMARK 3 L13: 0.0074 L23: 0.0676 REMARK 3 S TENSOR REMARK 3 S11: 0.2411 S12: 0.1544 S13: 0.2755 REMARK 3 S21: -0.2910 S22: -0.2080 S23: -0.5086 REMARK 3 S31: -0.0419 S32: 0.0447 S33: -0.0113 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2126 -54.4934 -9.1344 REMARK 3 T TENSOR REMARK 3 T11: 0.2572 T22: 0.3121 REMARK 3 T33: 0.2965 T12: 0.0544 REMARK 3 T13: -0.0600 T23: -0.0773 REMARK 3 L TENSOR REMARK 3 L11: 3.1334 L22: 3.6901 REMARK 3 L33: 3.1586 L12: -0.2668 REMARK 3 L13: -0.4396 L23: 0.3809 REMARK 3 S TENSOR REMARK 3 S11: 0.1877 S12: 0.5565 S13: -0.6025 REMARK 3 S21: -0.4895 S22: -0.1789 S23: 0.3335 REMARK 3 S31: 0.2061 S32: -0.1275 S33: 0.0200 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 190 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3134 -43.8266 1.6539 REMARK 3 T TENSOR REMARK 3 T11: 0.2327 T22: 0.2268 REMARK 3 T33: 0.2559 T12: -0.0140 REMARK 3 T13: 0.0376 T23: 0.0422 REMARK 3 L TENSOR REMARK 3 L11: 2.8389 L22: 2.3861 REMARK 3 L33: 0.6249 L12: -1.0231 REMARK 3 L13: 0.0633 L23: 0.4050 REMARK 3 S TENSOR REMARK 3 S11: 0.1192 S12: 0.0699 S13: 0.2227 REMARK 3 S21: -0.1235 S22: -0.0959 S23: -0.4733 REMARK 3 S31: -0.1206 S32: 0.0364 S33: -0.0221 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 30 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.8947 -10.0759 -16.6348 REMARK 3 T TENSOR REMARK 3 T11: 0.5901 T22: 0.4371 REMARK 3 T33: 0.6705 T12: 0.1588 REMARK 3 T13: 0.0607 T23: 0.1590 REMARK 3 L TENSOR REMARK 3 L11: 3.7386 L22: 6.8173 REMARK 3 L33: 8.7046 L12: 3.7180 REMARK 3 L13: -4.2287 L23: -1.9311 REMARK 3 S TENSOR REMARK 3 S11: 0.7056 S12: 1.2990 S13: 1.5226 REMARK 3 S21: -0.8141 S22: -0.0932 S23: 0.2653 REMARK 3 S31: -0.9205 S32: 0.0040 S33: -0.4644 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 51 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -43.3875 -12.7294 -1.2371 REMARK 3 T TENSOR REMARK 3 T11: 0.3107 T22: 0.2353 REMARK 3 T33: 0.5473 T12: -0.0100 REMARK 3 T13: 0.0272 T23: -0.0660 REMARK 3 L TENSOR REMARK 3 L11: 3.0376 L22: 1.6000 REMARK 3 L33: 1.0107 L12: -0.9099 REMARK 3 L13: 0.1538 L23: 0.0115 REMARK 3 S TENSOR REMARK 3 S11: 0.0142 S12: -0.1567 S13: 0.9591 REMARK 3 S21: -0.0400 S22: 0.0633 S23: -0.1078 REMARK 3 S31: -0.2509 S32: -0.0055 S33: -0.0839 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.0456 -36.9934 11.7345 REMARK 3 T TENSOR REMARK 3 T11: 0.2807 T22: 0.4213 REMARK 3 T33: 0.1915 T12: 0.0711 REMARK 3 T13: 0.0237 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 3.2853 L22: 3.0121 REMARK 3 L33: 1.8234 L12: -0.3051 REMARK 3 L13: -0.0110 L23: 0.5482 REMARK 3 S TENSOR REMARK 3 S11: -0.1895 S12: -0.8281 S13: -0.1600 REMARK 3 S21: 0.4587 S22: 0.2178 S23: 0.2326 REMARK 3 S31: 0.0114 S32: 0.1383 S33: 0.0061 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 205 THROUGH 236 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.3979 -13.1186 8.5195 REMARK 3 T TENSOR REMARK 3 T11: 0.4017 T22: 0.3956 REMARK 3 T33: 0.6097 T12: 0.0131 REMARK 3 T13: 0.0244 T23: -0.2211 REMARK 3 L TENSOR REMARK 3 L11: 3.5701 L22: 1.8901 REMARK 3 L33: 0.9290 L12: -0.9381 REMARK 3 L13: 0.1026 L23: -0.2926 REMARK 3 S TENSOR REMARK 3 S11: -0.0637 S12: -0.7760 S13: 0.9384 REMARK 3 S21: 0.2175 S22: 0.2432 S23: 0.0064 REMARK 3 S31: -0.1777 S32: 0.0202 S33: -0.1563 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 237 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.4347 -24.1810 -5.3427 REMARK 3 T TENSOR REMARK 3 T11: 0.2367 T22: 0.2345 REMARK 3 T33: 0.2363 T12: -0.0083 REMARK 3 T13: -0.0032 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 3.1506 L22: 2.1894 REMARK 3 L33: 0.7670 L12: -1.1758 REMARK 3 L13: -0.3791 L23: -0.0873 REMARK 3 S TENSOR REMARK 3 S11: 0.1030 S12: 0.0242 S13: 0.5023 REMARK 3 S21: -0.1580 S22: -0.0219 S23: -0.1448 REMARK 3 S31: -0.1036 S32: 0.1172 S33: -0.0838 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6X9Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000249807. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97927 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68159 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 47.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.5800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.71500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.120 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 0.1 M HEPES: REMARK 280 NAOH, 25 % (W/V) PEG 4000, 0.2 M LITHIUM SULFATE, PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.38050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.38050 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 46.38050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 28 REMARK 465 ASN A 29 REMARK 465 ALA A 30 REMARK 465 SER B 28 REMARK 465 ASN B 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 34 CG CD OE1 NE2 REMARK 470 LYS A 51 NZ REMARK 470 LYS A 153 NZ REMARK 470 GLN B 33 CG CD OE1 NE2 REMARK 470 GLN B 34 CD OE1 NE2 REMARK 470 LYS B 51 CE NZ REMARK 470 LYS B 64 CE NZ REMARK 470 LYS B 126 CE NZ REMARK 470 LYS B 153 NZ REMARK 470 LYS B 202 CE NZ REMARK 470 LYS B 266 CE NZ REMARK 470 LYS B 273 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 234 O HOH A 501 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 205 -63.67 -124.57 REMARK 500 TYR A 248 18.69 -158.51 REMARK 500 ASN A 368 45.92 -98.76 REMARK 500 SER B 181 -61.90 -91.29 REMARK 500 VAL B 205 -55.21 -127.64 REMARK 500 TYR B 248 15.97 -155.96 REMARK 500 ALA B 334 124.49 -37.50 REMARK 500 ASN B 368 46.11 -99.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SRT B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP97191 RELATED DB: TARGETTRACK DBREF1 6X9Y A 31 388 UNP A0A0H2VDE7_ECOL6 DBREF2 6X9Y A A0A0H2VDE7 31 388 DBREF1 6X9Y B 31 388 UNP A0A0H2VDE7_ECOL6 DBREF2 6X9Y B A0A0H2VDE7 31 388 SEQADV 6X9Y SER A 28 UNP A0A0H2VDE EXPRESSION TAG SEQADV 6X9Y ASN A 29 UNP A0A0H2VDE EXPRESSION TAG SEQADV 6X9Y ALA A 30 UNP A0A0H2VDE EXPRESSION TAG SEQADV 6X9Y SER B 28 UNP A0A0H2VDE EXPRESSION TAG SEQADV 6X9Y ASN B 29 UNP A0A0H2VDE EXPRESSION TAG SEQADV 6X9Y ALA B 30 UNP A0A0H2VDE EXPRESSION TAG SEQRES 1 A 361 SER ASN ALA ALA PRO GLN GLN ILE ASN ASP ILE VAL HIS SEQRES 2 A 361 ARG THR ILE THR PRO LEU ILE GLU GLN GLN LYS ILE PRO SEQRES 3 A 361 GLY MET ALA VAL ALA VAL ILE TYR GLN GLY LYS PRO TYR SEQRES 4 A 361 TYR PHE THR TRP GLY TYR ALA ASP ILE ALA LYS LYS GLN SEQRES 5 A 361 PRO VAL THR GLN GLN THR LEU PHE GLU LEU GLY SER VAL SEQRES 6 A 361 SER LYS THR PHE THR GLY VAL LEU GLY GLY ASP ALA ILE SEQRES 7 A 361 ALA ARG GLY GLU ILE LYS LEU SER ASP PRO THR THR LYS SEQRES 8 A 361 TYR TRP PRO GLU LEU THR ALA LYS GLN TRP ASN GLY ILE SEQRES 9 A 361 THR LEU LEU HIS LEU ALA THR TYR THR ALA GLY GLY LEU SEQRES 10 A 361 PRO LEU GLN VAL PRO ASP GLU VAL LYS SER SER SER ASP SEQRES 11 A 361 LEU LEU ARG PHE TYR GLN ASN TRP GLN PRO ALA TRP ALA SEQRES 12 A 361 PRO GLY THR GLN ARG LEU TYR ALA ASN SER SER ILE GLY SEQRES 13 A 361 LEU PHE GLY ALA LEU ALA VAL LYS PRO SER GLY LEU SER SEQRES 14 A 361 PHE GLU GLN ALA MET LYS THR ARG VAL PHE GLN PRO LEU SEQRES 15 A 361 LYS LEU ASN HIS THR TRP ILE ASN VAL PRO SER ALA GLU SEQRES 16 A 361 GLU LYS ASN TYR ALA TRP GLY TYR ARG GLU GLY LYS ALA SEQRES 17 A 361 VAL HIS VAL SER PRO GLY ALA LEU ASP ALA GLU ALA TYR SEQRES 18 A 361 GLY VAL LYS SER THR ILE GLU ASP MET ALA ARG TRP VAL SEQRES 19 A 361 GLN SER ASN LEU LYS PRO LEU ASP ILE ASN GLU LYS THR SEQRES 20 A 361 LEU GLN GLN GLY ILE GLN LEU ALA GLN SER ARG TYR TRP SEQRES 21 A 361 GLN THR GLY ASP MET TYR GLN GLY LEU GLY TRP GLU MET SEQRES 22 A 361 LEU ASP TRP PRO VAL ASN PRO ASP ILE ILE ILE ASN GLY SEQRES 23 A 361 SER ASP ASN LYS ILE ALA LEU ALA ALA ARG PRO VAL LYS SEQRES 24 A 361 PRO ILE THR PRO PRO THR PRO ALA VAL ARG ALA SER TRP SEQRES 25 A 361 VAL HIS LYS THR GLY ALA THR GLY GLY PHE GLY SER TYR SEQRES 26 A 361 VAL ALA PHE ILE PRO GLU LYS GLU LEU GLY ILE VAL MET SEQRES 27 A 361 LEU ALA ASN LYS ASN TYR PRO ASN PRO ALA ARG VAL ALA SEQRES 28 A 361 ALA ALA TRP GLN ILE LEU ASN ALA LEU GLN SEQRES 1 B 361 SER ASN ALA ALA PRO GLN GLN ILE ASN ASP ILE VAL HIS SEQRES 2 B 361 ARG THR ILE THR PRO LEU ILE GLU GLN GLN LYS ILE PRO SEQRES 3 B 361 GLY MET ALA VAL ALA VAL ILE TYR GLN GLY LYS PRO TYR SEQRES 4 B 361 TYR PHE THR TRP GLY TYR ALA ASP ILE ALA LYS LYS GLN SEQRES 5 B 361 PRO VAL THR GLN GLN THR LEU PHE GLU LEU GLY SER VAL SEQRES 6 B 361 SER LYS THR PHE THR GLY VAL LEU GLY GLY ASP ALA ILE SEQRES 7 B 361 ALA ARG GLY GLU ILE LYS LEU SER ASP PRO THR THR LYS SEQRES 8 B 361 TYR TRP PRO GLU LEU THR ALA LYS GLN TRP ASN GLY ILE SEQRES 9 B 361 THR LEU LEU HIS LEU ALA THR TYR THR ALA GLY GLY LEU SEQRES 10 B 361 PRO LEU GLN VAL PRO ASP GLU VAL LYS SER SER SER ASP SEQRES 11 B 361 LEU LEU ARG PHE TYR GLN ASN TRP GLN PRO ALA TRP ALA SEQRES 12 B 361 PRO GLY THR GLN ARG LEU TYR ALA ASN SER SER ILE GLY SEQRES 13 B 361 LEU PHE GLY ALA LEU ALA VAL LYS PRO SER GLY LEU SER SEQRES 14 B 361 PHE GLU GLN ALA MET LYS THR ARG VAL PHE GLN PRO LEU SEQRES 15 B 361 LYS LEU ASN HIS THR TRP ILE ASN VAL PRO SER ALA GLU SEQRES 16 B 361 GLU LYS ASN TYR ALA TRP GLY TYR ARG GLU GLY LYS ALA SEQRES 17 B 361 VAL HIS VAL SER PRO GLY ALA LEU ASP ALA GLU ALA TYR SEQRES 18 B 361 GLY VAL LYS SER THR ILE GLU ASP MET ALA ARG TRP VAL SEQRES 19 B 361 GLN SER ASN LEU LYS PRO LEU ASP ILE ASN GLU LYS THR SEQRES 20 B 361 LEU GLN GLN GLY ILE GLN LEU ALA GLN SER ARG TYR TRP SEQRES 21 B 361 GLN THR GLY ASP MET TYR GLN GLY LEU GLY TRP GLU MET SEQRES 22 B 361 LEU ASP TRP PRO VAL ASN PRO ASP ILE ILE ILE ASN GLY SEQRES 23 B 361 SER ASP ASN LYS ILE ALA LEU ALA ALA ARG PRO VAL LYS SEQRES 24 B 361 PRO ILE THR PRO PRO THR PRO ALA VAL ARG ALA SER TRP SEQRES 25 B 361 VAL HIS LYS THR GLY ALA THR GLY GLY PHE GLY SER TYR SEQRES 26 B 361 VAL ALA PHE ILE PRO GLU LYS GLU LEU GLY ILE VAL MET SEQRES 27 B 361 LEU ALA ASN LYS ASN TYR PRO ASN PRO ALA ARG VAL ALA SEQRES 28 B 361 ALA ALA TRP GLN ILE LEU ASN ALA LEU GLN HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET SO4 A 405 5 HET SO4 A 406 5 HET GOL B 401 6 HET GOL B 402 6 HET GOL B 403 6 HET SRT B 404 10 HET SO4 B 405 5 HET SO4 B 406 5 HET SO4 B 407 5 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM SRT S,R MESO-TARTARIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 7(C3 H8 O3) FORMUL 7 SO4 5(O4 S 2-) FORMUL 12 SRT C4 H6 O6 FORMUL 16 HOH *240(H2 O) HELIX 1 AA1 ALA A 31 LYS A 51 1 21 HELIX 2 AA2 VAL A 92 ARG A 107 1 16 HELIX 3 AA3 PRO A 115 TRP A 120 1 6 HELIX 4 AA4 ALA A 125 ASN A 129 5 5 HELIX 5 AA5 THR A 132 THR A 138 1 7 HELIX 6 AA6 SER A 154 TRP A 165 1 12 HELIX 7 AA7 ALA A 178 VAL A 190 1 13 HELIX 8 AA8 SER A 196 VAL A 205 1 10 HELIX 9 AA9 PRO A 219 TYR A 226 5 8 HELIX 10 AB1 LEU A 243 TYR A 248 1 6 HELIX 11 AB2 ILE A 254 LYS A 266 1 13 HELIX 12 AB3 PRO A 267 ILE A 270 5 4 HELIX 13 AB4 GLU A 272 GLN A 283 1 12 HELIX 14 AB5 ASN A 306 SER A 314 1 9 HELIX 15 AB6 ASP A 315 LEU A 320 1 6 HELIX 16 AB7 PRO A 357 GLU A 360 5 4 HELIX 17 AB8 PRO A 372 LEU A 387 1 16 HELIX 18 AB9 ALA B 31 LYS B 51 1 21 HELIX 19 AC1 VAL B 92 ARG B 107 1 16 HELIX 20 AC2 PRO B 115 TYR B 119 5 5 HELIX 21 AC3 ALA B 125 ASN B 129 5 5 HELIX 22 AC4 THR B 132 THR B 138 1 7 HELIX 23 AC5 SER B 154 TRP B 165 1 12 HELIX 24 AC6 ALA B 178 VAL B 190 1 13 HELIX 25 AC7 SER B 196 VAL B 205 1 10 HELIX 26 AC8 PRO B 219 TYR B 226 5 8 HELIX 27 AC9 LEU B 243 TYR B 248 1 6 HELIX 28 AD1 THR B 253 LYS B 266 1 14 HELIX 29 AD2 PRO B 267 ILE B 270 5 4 HELIX 30 AD3 GLU B 272 GLN B 283 1 12 HELIX 31 AD4 ASN B 306 ASP B 315 1 10 HELIX 32 AD5 ASP B 315 LEU B 320 1 6 HELIX 33 AD6 PRO B 357 GLU B 360 5 4 HELIX 34 AD7 PRO B 372 GLN B 388 1 17 SHEET 1 AA110 GLN A 79 PRO A 80 0 SHEET 2 AA110 LYS A 64 ASP A 74 -1 N ALA A 73 O GLN A 79 SHEET 3 AA110 GLY A 54 TYR A 61 -1 N VAL A 57 O PHE A 68 SHEET 4 AA110 LEU A 361 ALA A 367 -1 O LEU A 366 N ALA A 56 SHEET 5 AA110 GLY A 350 ILE A 356 -1 N ILE A 356 O LEU A 361 SHEET 6 AA110 SER A 338 ALA A 345 -1 N GLY A 344 O SER A 351 SHEET 7 AA110 GLU A 299 ASP A 302 -1 N LEU A 301 O TRP A 339 SHEET 8 AA110 MET A 292 GLN A 294 -1 N TYR A 293 O MET A 300 SHEET 9 AA110 ARG A 285 THR A 289 -1 N THR A 289 O MET A 292 SHEET 10 AA110 LYS A 326 THR A 332 -1 O THR A 332 N ARG A 285 SHEET 1 AA2 2 LEU A 86 GLU A 88 0 SHEET 2 AA2 2 LYS A 251 THR A 253 -1 O SER A 252 N PHE A 87 SHEET 1 AA3 2 GLN A 174 ARG A 175 0 SHEET 2 AA3 2 ARG A 323 PRO A 324 -1 O ARG A 323 N ARG A 175 SHEET 1 AA4 2 GLY A 229 ARG A 231 0 SHEET 2 AA4 2 LYS A 234 VAL A 236 -1 O VAL A 236 N GLY A 229 SHEET 1 AA510 GLN B 79 PRO B 80 0 SHEET 2 AA510 LYS B 64 ASP B 74 -1 N ALA B 73 O GLN B 79 SHEET 3 AA510 GLY B 54 TYR B 61 -1 N TYR B 61 O LYS B 64 SHEET 4 AA510 LEU B 361 ALA B 367 -1 O LEU B 366 N ALA B 56 SHEET 5 AA510 GLY B 350 ILE B 356 -1 N ILE B 356 O LEU B 361 SHEET 6 AA510 SER B 338 ALA B 345 -1 N GLY B 344 O SER B 351 SHEET 7 AA510 GLU B 299 ASP B 302 -1 N LEU B 301 O TRP B 339 SHEET 8 AA510 MET B 292 GLN B 294 -1 N TYR B 293 O MET B 300 SHEET 9 AA510 ARG B 285 THR B 289 -1 N THR B 289 O MET B 292 SHEET 10 AA510 LYS B 326 THR B 332 -1 O THR B 332 N ARG B 285 SHEET 1 AA6 2 PHE B 87 GLU B 88 0 SHEET 2 AA6 2 LYS B 251 SER B 252 -1 O SER B 252 N PHE B 87 SHEET 1 AA7 2 GLN B 174 ARG B 175 0 SHEET 2 AA7 2 ARG B 323 PRO B 324 -1 O ARG B 323 N ARG B 175 SHEET 1 AA8 2 GLY B 229 ARG B 231 0 SHEET 2 AA8 2 LYS B 234 VAL B 236 -1 O VAL B 236 N GLY B 229 CISPEP 1 TRP A 303 PRO A 304 0 0.67 CISPEP 2 THR A 329 PRO A 330 0 -12.33 CISPEP 3 TRP B 303 PRO B 304 0 2.05 CISPEP 4 THR B 329 PRO B 330 0 0.27 SITE 1 AC1 7 VAL A 236 HIS A 237 VAL A 238 SER A 239 SITE 2 AC1 7 GLY A 347 GOL A 404 HOH A 588 SITE 1 AC2 6 ASP A 315 ASN A 316 TYR A 371 PRO A 372 SITE 2 AC2 6 ASN A 373 HOH A 516 SITE 1 AC3 6 LEU A 176 GLU A 232 GLY A 233 LEU A 320 SITE 2 AC3 6 ALA A 322 HOH A 597 SITE 1 AC4 6 GLN A 147 ASN A 179 ALA A 345 THR A 346 SITE 2 AC4 6 GLY A 347 GOL A 401 SITE 1 AC5 3 TRP A 120 LEU A 188 LYS A 191 SITE 1 AC6 8 SER A 91 TYR A 177 LYS A 342 THR A 343 SITE 2 AC6 8 GLY A 344 ALA A 345 HOH A 504 HOH A 605 SITE 1 AC7 5 ASN B 316 PRO B 372 ASN B 373 HOH B 502 SITE 2 AC7 5 HOH B 511 SITE 1 AC8 9 SER B 91 TYR B 177 LYS B 342 THR B 343 SITE 2 AC8 9 GLY B 344 ALA B 345 HOH B 525 HOH B 597 SITE 3 AC8 9 HOH B 604 SITE 1 AC9 5 GLN B 147 ASN B 179 ALA B 345 SO4 B 407 SITE 2 AC9 5 HOH B 597 SITE 1 AD1 7 HIS A 135 GLY A 172 TRP A 287 HOH A 530 SITE 2 AD1 7 PRO B 327 THR B 329 HOH B 580 SITE 1 AD2 3 TRP B 120 ALA B 187 LYS B 191 SITE 1 AD3 5 GLU B 232 GLY B 233 LEU B 320 ALA B 321 SITE 2 AD3 5 ALA B 322 SITE 1 AD4 4 VAL B 238 SER B 239 GLY B 347 GOL B 403 CRYST1 128.176 128.176 92.761 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007802 0.004504 0.000000 0.00000 SCALE2 0.000000 0.009009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010780 0.00000