HEADER CYTOSOLIC PROTEIN 04-JUN-20 6XA7 TITLE CRYSTAL STRUCTURE OF HUMAN SCRIBBLE PDZ2:VANGL2 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN SCRIBBLE HOMOLOG; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: HSCRIB,PROTEIN LAP4; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: VANG-LIKE PROTEIN 2; COMPND 8 CHAIN: E, F, G, H; COMPND 9 FRAGMENT: C-TERMINAL RESIDUES 514-521; COMPND 10 SYNONYM: LOOP-TAIL PROTEIN 1 HOMOLOG,STRABISMUS 1,VAN GOGH-LIKE COMPND 11 PROTEIN 2; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SCRIB, CRIB1, KIAA0147, LAP4, SCRB1, VARTUL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX-6P3; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606 KEYWDS CELL POLARITY, SCRIBBLE, CYTOSOLIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.Y.HOW,M.KVANSAKUL REVDAT 3 03-APR-24 6XA7 1 REMARK REVDAT 2 21-APR-21 6XA7 1 JRNL REVDAT 1 24-MAR-21 6XA7 0 JRNL AUTH J.Y.HOW,R.K.STEPHENS,K.Y.B.LIM,P.O.HUMBERT,M.KVANSAKUL JRNL TITL STRUCTURAL BASIS OF THE HUMAN SCRIBBLE-VANGL2 ASSOCIATION IN JRNL TITL 2 HEALTH AND DISEASE. JRNL REF BIOCHEM.J. V. 478 1321 2021 JRNL REFN ESSN 1470-8728 JRNL PMID 33684218 JRNL DOI 10.1042/BCJ20200816 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 13812 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 661 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.1700 - 4.2700 0.88 2565 141 0.2020 0.2185 REMARK 3 2 4.2700 - 3.3900 0.89 2540 136 0.2048 0.2305 REMARK 3 3 3.3900 - 2.9600 0.92 2660 135 0.2581 0.3405 REMARK 3 4 2.9600 - 2.6900 0.94 2706 114 0.2808 0.2956 REMARK 3 5 2.6900 - 2.5000 0.94 2680 135 0.3188 0.3775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.347 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.41 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2838 REMARK 3 ANGLE : 0.982 3822 REMARK 3 CHIRALITY : 0.052 456 REMARK 3 PLANARITY : 0.005 503 REMARK 3 DIHEDRAL : 34.255 434 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XA7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000249194. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13826 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 47.174 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.42500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDZ3-VANGL2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM THIOCYANATE, 20% (W/V) REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 25.40361 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.38250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.03602 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 25.40361 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.38250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 46.03602 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 855 REMARK 465 ARG A 870 REMARK 465 ALA A 950 REMARK 465 GLY C 855 REMARK 465 PRO C 856 REMARK 465 LEU C 857 REMARK 465 GLY C 881 REMARK 465 GLY D 855 REMARK 465 PRO D 856 REMARK 465 LEU D 857 REMARK 465 GLU D 949 REMARK 465 ALA D 950 REMARK 465 ARG E 514 REMARK 465 LEU E 515 REMARK 465 ARG F 514 REMARK 465 LEU F 515 REMARK 465 GLN F 516 REMARK 465 SER F 517 REMARK 465 ARG G 514 REMARK 465 LEU G 515 REMARK 465 GLN G 516 REMARK 465 ARG H 514 REMARK 465 LEU H 515 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 856 CG CD REMARK 470 GLU A 869 CG CD OE1 OE2 REMARK 470 ARG B 870 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 927 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 949 CG CD OE1 OE2 REMARK 470 GLU D 869 CG CD OE1 OE2 REMARK 470 ARG D 870 CG CD NE CZ NH1 NH2 REMARK 470 GLN E 516 CG CD OE1 NE2 REMARK 470 GLN H 516 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLY D 881 O HOH D 1101 1.32 REMARK 500 HH21 ARG A 896 O HOH A 1003 1.42 REMARK 500 HH TYR A 885 O HOH A 1004 1.46 REMARK 500 OD2 ASP B 913 HH21 ARG B 948 1.46 REMARK 500 H TYR C 885 O HOH C 1104 1.51 REMARK 500 H SER B 882 O HOH B 1105 1.52 REMARK 500 HG SER A 882 O HOH A 1001 1.55 REMARK 500 HH22 ARG D 927 O HOH D 1106 1.60 REMARK 500 O THR C 936 O HOH C 1101 1.80 REMARK 500 O HOH D 1112 O HOH D 1128 1.90 REMARK 500 N GLY D 881 O HOH D 1101 1.93 REMARK 500 O HOH A 1014 O HOH A 1037 1.95 REMARK 500 O ALA B 903 O HOH B 1101 1.95 REMARK 500 OE1 GLU D 947 O HOH D 1102 2.02 REMARK 500 O HOH C 1101 O HOH C 1115 2.04 REMARK 500 O LYS B 880 O HOH B 1102 2.06 REMARK 500 O2 EDO C 1001 O HOH C 1102 2.07 REMARK 500 O HOH D 1106 O HOH D 1130 2.08 REMARK 500 O HOH A 1032 O HOH A 1033 2.11 REMARK 500 OG SER A 882 O HOH A 1001 2.11 REMARK 500 NH1 ARG A 867 O LEU A 935 2.11 REMARK 500 O ARG D 948 O HOH D 1103 2.12 REMARK 500 O GLY A 873 O HOH A 1002 2.14 REMARK 500 O LEU D 909 O HOH D 1104 2.15 REMARK 500 O THR B 883 O HOH B 1103 2.16 REMARK 500 NH2 ARG B 867 O HOH B 1104 2.16 REMARK 500 NH2 ARG A 896 O HOH A 1003 2.16 REMARK 500 NH1 ARG B 867 O ALA B 937 2.17 REMARK 500 O HOH A 1006 O HOH A 1033 2.17 REMARK 500 CA GLY D 881 O HOH D 1101 2.18 REMARK 500 OH TYR A 885 O HOH A 1004 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 SG CYS B 864 SG CYS D 864 4545 1.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 856 N - CA - CB ANGL. DEV. = 8.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 868 -156.01 -105.92 REMARK 500 ALA A 887 108.56 -53.17 REMARK 500 ASP A 889 107.29 -160.67 REMARK 500 PRO B 856 -8.47 -56.90 REMARK 500 GLU B 925 30.24 -142.44 REMARK 500 SER B 939 151.95 -46.32 REMARK 500 ALA D 890 32.85 -84.01 REMARK 500 THR D 908 -70.11 -93.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO G 601 DBREF 6XA7 A 860 950 UNP Q14160 SCRIB_HUMAN 860 950 DBREF 6XA7 B 860 950 UNP Q14160 SCRIB_HUMAN 860 950 DBREF 6XA7 C 860 950 UNP Q14160 SCRIB_HUMAN 860 950 DBREF 6XA7 D 860 950 UNP Q14160 SCRIB_HUMAN 860 950 DBREF 6XA7 E 514 521 UNP Q9ULK5 VANG2_HUMAN 514 521 DBREF 6XA7 F 514 521 UNP Q9ULK5 VANG2_HUMAN 514 521 DBREF 6XA7 G 514 521 UNP Q9ULK5 VANG2_HUMAN 514 521 DBREF 6XA7 H 514 521 UNP Q9ULK5 VANG2_HUMAN 514 521 SEQADV 6XA7 GLY A 855 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 PRO A 856 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 LEU A 857 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 GLY A 858 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 SER A 859 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 GLY B 855 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 PRO B 856 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 LEU B 857 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 GLY B 858 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 SER B 859 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 GLY C 855 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 PRO C 856 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 LEU C 857 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 GLY C 858 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 SER C 859 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 GLY D 855 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 PRO D 856 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 LEU D 857 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 GLY D 858 UNP Q14160 EXPRESSION TAG SEQADV 6XA7 SER D 859 UNP Q14160 EXPRESSION TAG SEQRES 1 A 96 GLY PRO LEU GLY SER ARG HIS VAL ALA CYS LEU ALA ARG SEQRES 2 A 96 SER GLU ARG GLY LEU GLY PHE SER ILE ALA GLY GLY LYS SEQRES 3 A 96 GLY SER THR PRO TYR ARG ALA GLY ASP ALA GLY ILE PHE SEQRES 4 A 96 VAL SER ARG ILE ALA GLU GLY GLY ALA ALA HIS ARG ALA SEQRES 5 A 96 GLY THR LEU GLN VAL GLY ASP ARG VAL LEU SER ILE ASN SEQRES 6 A 96 GLY VAL ASP VAL THR GLU ALA ARG HIS ASP HIS ALA VAL SEQRES 7 A 96 SER LEU LEU THR ALA ALA SER PRO THR ILE ALA LEU LEU SEQRES 8 A 96 LEU GLU ARG GLU ALA SEQRES 1 B 96 GLY PRO LEU GLY SER ARG HIS VAL ALA CYS LEU ALA ARG SEQRES 2 B 96 SER GLU ARG GLY LEU GLY PHE SER ILE ALA GLY GLY LYS SEQRES 3 B 96 GLY SER THR PRO TYR ARG ALA GLY ASP ALA GLY ILE PHE SEQRES 4 B 96 VAL SER ARG ILE ALA GLU GLY GLY ALA ALA HIS ARG ALA SEQRES 5 B 96 GLY THR LEU GLN VAL GLY ASP ARG VAL LEU SER ILE ASN SEQRES 6 B 96 GLY VAL ASP VAL THR GLU ALA ARG HIS ASP HIS ALA VAL SEQRES 7 B 96 SER LEU LEU THR ALA ALA SER PRO THR ILE ALA LEU LEU SEQRES 8 B 96 LEU GLU ARG GLU ALA SEQRES 1 C 96 GLY PRO LEU GLY SER ARG HIS VAL ALA CYS LEU ALA ARG SEQRES 2 C 96 SER GLU ARG GLY LEU GLY PHE SER ILE ALA GLY GLY LYS SEQRES 3 C 96 GLY SER THR PRO TYR ARG ALA GLY ASP ALA GLY ILE PHE SEQRES 4 C 96 VAL SER ARG ILE ALA GLU GLY GLY ALA ALA HIS ARG ALA SEQRES 5 C 96 GLY THR LEU GLN VAL GLY ASP ARG VAL LEU SER ILE ASN SEQRES 6 C 96 GLY VAL ASP VAL THR GLU ALA ARG HIS ASP HIS ALA VAL SEQRES 7 C 96 SER LEU LEU THR ALA ALA SER PRO THR ILE ALA LEU LEU SEQRES 8 C 96 LEU GLU ARG GLU ALA SEQRES 1 D 96 GLY PRO LEU GLY SER ARG HIS VAL ALA CYS LEU ALA ARG SEQRES 2 D 96 SER GLU ARG GLY LEU GLY PHE SER ILE ALA GLY GLY LYS SEQRES 3 D 96 GLY SER THR PRO TYR ARG ALA GLY ASP ALA GLY ILE PHE SEQRES 4 D 96 VAL SER ARG ILE ALA GLU GLY GLY ALA ALA HIS ARG ALA SEQRES 5 D 96 GLY THR LEU GLN VAL GLY ASP ARG VAL LEU SER ILE ASN SEQRES 6 D 96 GLY VAL ASP VAL THR GLU ALA ARG HIS ASP HIS ALA VAL SEQRES 7 D 96 SER LEU LEU THR ALA ALA SER PRO THR ILE ALA LEU LEU SEQRES 8 D 96 LEU GLU ARG GLU ALA SEQRES 1 E 8 ARG LEU GLN SER GLU THR SER VAL SEQRES 1 F 8 ARG LEU GLN SER GLU THR SER VAL SEQRES 1 G 8 ARG LEU GLN SER GLU THR SER VAL SEQRES 1 H 8 ARG LEU GLN SER GLU THR SER VAL HET EDO B1001 10 HET EDO B1002 10 HET EDO C1001 10 HET EDO C1002 10 HET EDO C1003 10 HET EDO D1001 10 HET EDO G 601 10 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 9 EDO 7(C2 H6 O2) FORMUL 16 HOH *132(H2 O) HELIX 1 AA1 GLY A 901 GLY A 907 1 7 HELIX 2 AA2 ARG A 927 ALA A 937 1 11 HELIX 3 AA3 GLY B 901 GLY B 907 1 7 HELIX 4 AA4 THR B 924 ALA B 926 5 3 HELIX 5 AA5 ARG B 927 THR B 936 1 10 HELIX 6 AA6 GLY C 901 GLY C 907 1 7 HELIX 7 AA7 ARG C 927 ALA C 937 1 11 HELIX 8 AA8 GLY D 901 GLY D 907 1 7 HELIX 9 AA9 ARG D 927 ALA D 937 1 11 SHEET 1 AA1 4 SER A 859 ALA A 866 0 SHEET 2 AA1 4 THR A 941 ARG A 948 -1 O ARG A 948 N SER A 859 SHEET 3 AA1 4 ARG A 914 ILE A 918 -1 N LEU A 916 O LEU A 945 SHEET 4 AA1 4 VAL A 921 ASP A 922 -1 O VAL A 921 N ILE A 918 SHEET 1 AA2 6 SER A 859 ALA A 866 0 SHEET 2 AA2 6 THR A 941 ARG A 948 -1 O ARG A 948 N SER A 859 SHEET 3 AA2 6 ARG A 914 ILE A 918 -1 N LEU A 916 O LEU A 945 SHEET 4 AA2 6 ILE A 892 ILE A 897 -1 N ILE A 892 O VAL A 915 SHEET 5 AA2 6 PHE A 874 GLY A 878 -1 N SER A 875 O ARG A 896 SHEET 6 AA2 6 GLU E 518 VAL E 521 -1 O VAL E 521 N PHE A 874 SHEET 1 AA3 4 SER B 859 ALA B 866 0 SHEET 2 AA3 4 THR B 941 ARG B 948 -1 O ARG B 948 N SER B 859 SHEET 3 AA3 4 ARG B 914 ILE B 918 -1 N ARG B 914 O GLU B 947 SHEET 4 AA3 4 VAL B 921 ASP B 922 -1 O VAL B 921 N ILE B 918 SHEET 1 AA4 3 ILE B 892 ILE B 897 0 SHEET 2 AA4 3 PHE B 874 GLY B 878 -1 N ALA B 877 O PHE B 893 SHEET 3 AA4 3 THR F 519 SER F 520 -1 O THR F 519 N ILE B 876 SHEET 1 AA5 4 SER C 859 ALA C 866 0 SHEET 2 AA5 4 THR C 941 ARG C 948 -1 O LEU C 946 N HIS C 861 SHEET 3 AA5 4 ARG C 914 ILE C 918 -1 N ARG C 914 O GLU C 947 SHEET 4 AA5 4 VAL C 921 ASP C 922 -1 O VAL C 921 N ILE C 918 SHEET 1 AA6 3 PHE C 893 ILE C 897 0 SHEET 2 AA6 3 PHE C 874 ALA C 877 -1 N SER C 875 O SER C 895 SHEET 3 AA6 3 GLU G 518 SER G 520 -1 O THR G 519 N ILE C 876 SHEET 1 AA7 4 ARG D 860 LEU D 865 0 SHEET 2 AA7 4 ILE D 942 GLU D 947 -1 O LEU D 946 N HIS D 861 SHEET 3 AA7 4 ARG D 914 ILE D 918 -1 N LEU D 916 O LEU D 945 SHEET 4 AA7 4 VAL D 921 ASP D 922 -1 O VAL D 921 N ILE D 918 SHEET 1 AA8 3 ILE D 892 ILE D 897 0 SHEET 2 AA8 3 PHE D 874 GLY D 878 -1 N ALA D 877 O PHE D 893 SHEET 3 AA8 3 GLU H 518 SER H 520 -1 O THR H 519 N ILE D 876 SSBOND 1 CYS A 864 CYS C 864 1555 1555 2.04 SITE 1 AC1 6 GLY B 891 ILE B 892 ARG B 914 VAL B 915 SITE 2 AC1 6 VAL B 923 THR B 924 SITE 1 AC2 2 GLU B 899 HOH B1112 SITE 1 AC3 2 GLU C 899 HOH C1102 SITE 1 AC4 4 GLU C 899 LEU D 909 HOH D1104 HOH D1117 SITE 1 AC5 5 THR A 941 CYS C 864 LEU C 865 ALA C 866 SITE 2 AC5 5 ALA C 902 SITE 1 AC6 7 VAL B 862 VAL D 862 SER D 917 ASN D 919 SITE 2 AC6 7 GLY D 920 ALA D 943 LEU D 944 SITE 1 AC7 5 TYR C 885 ARG C 896 ARG D 870 GLU G 518 SITE 2 AC7 5 HOH G 701 CRYST1 78.047 60.765 96.017 90.00 106.48 90.00 I 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012813 0.000000 0.003791 0.00000 SCALE2 0.000000 0.016457 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010861 0.00000