HEADER MEMBRANE PROTEIN 09-JUN-20 6XCU TITLE NMR STRUCTURE OF OST4V23D, A CRITICAL MUTANT OF OST4, IN DPC MICELLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: OLIGOSACCHARYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OST4; COMPND 5 EC: 2.4.1.119; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN YJM789); SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 307796; SOURCE 5 STRAIN: YJM789; SOURCE 6 GENE: OST4, SCY_0690; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.P.CHAUDHARY REVDAT 3 14-JUN-23 6XCU 1 REMARK REVDAT 2 29-SEP-21 6XCU 1 JRNL REVDAT 1 10-FEB-21 6XCU 0 JRNL AUTH B.P.CHAUDHARY,D.L.ZOETEWEY,M.J.MCCULLAGH,S.MOHANTY JRNL TITL NMR AND MD SIMULATIONS REVEAL THE IMPACT OF THE V23D JRNL TITL 2 MUTATION ON THE FUNCTION OF YEAST OLIGOSACCHARYLTRANSFERASE JRNL TITL 3 SUBUNIT OST4. JRNL REF GLYCOBIOLOGY V. 31 838 2021 JRNL REFN ESSN 1460-2423 JRNL PMID 33442744 JRNL DOI 10.1093/GLYCOB/CWAB002 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XCU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000249951. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 400 UM [U-13C; U-15N] OST4V23D, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D H(CCO)NH; 3D 1H- REMARK 210 15N NOESY; 3D 1H-15N TOCSY; 3D REMARK 210 HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; AVANCE II; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, NMRFAM-SPARKY, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 HIS A 40 REMARK 465 HIS A 41 REMARK 465 HIS A 42 REMARK 465 HIS A 43 REMARK 465 HIS A 44 REMARK 465 HIS A 45 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 34 -177.77 -69.74 REMARK 500 1 ASN A 36 53.14 -97.06 REMARK 500 2 PRO A 34 -171.03 -69.68 REMARK 500 3 PRO A 34 -171.06 -69.68 REMARK 500 4 LEU A 38 72.52 56.66 REMARK 500 5 PRO A 34 -175.69 -69.79 REMARK 500 6 LEU A 38 -61.39 -104.97 REMARK 500 8 PRO A 34 80.80 -69.76 REMARK 500 9 PRO A 34 -175.19 -69.75 REMARK 500 12 LYS A 35 -67.99 -94.77 REMARK 500 13 PRO A 34 95.48 -69.81 REMARK 500 13 LYS A 35 58.75 -115.52 REMARK 500 13 ARG A 37 72.60 -109.66 REMARK 500 15 LYS A 35 -74.58 -149.32 REMARK 500 15 ASN A 36 -66.91 -123.78 REMARK 500 15 ARG A 37 -179.74 -172.49 REMARK 500 17 PRO A 34 89.97 -69.74 REMARK 500 17 LYS A 35 62.05 -102.78 REMARK 500 18 PRO A 34 94.92 -69.80 REMARK 500 18 ARG A 37 -53.70 -122.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30761 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF OST4 IN DPC MICELLES DBREF 6XCU A 1 36 UNP A6ZXA2 A6ZXA2_YEAS7 1 36 SEQADV 6XCU ASP A 23 UNP A6ZXA2 VAL 23 ENGINEERED MUTATION SEQADV 6XCU ARG A 37 UNP A6ZXA2 EXPRESSION TAG SEQADV 6XCU LEU A 38 UNP A6ZXA2 EXPRESSION TAG SEQADV 6XCU GLU A 39 UNP A6ZXA2 EXPRESSION TAG SEQADV 6XCU HIS A 40 UNP A6ZXA2 EXPRESSION TAG SEQADV 6XCU HIS A 41 UNP A6ZXA2 EXPRESSION TAG SEQADV 6XCU HIS A 42 UNP A6ZXA2 EXPRESSION TAG SEQADV 6XCU HIS A 43 UNP A6ZXA2 EXPRESSION TAG SEQADV 6XCU HIS A 44 UNP A6ZXA2 EXPRESSION TAG SEQADV 6XCU HIS A 45 UNP A6ZXA2 EXPRESSION TAG SEQRES 1 A 45 MET ILE SER ASP GLU GLN LEU ASN SER LEU ALA ILE THR SEQRES 2 A 45 PHE GLY ILE VAL MET MET THR LEU ILE ASP ILE TYR HIS SEQRES 3 A 45 ALA VAL ASP SER THR MET SER PRO LYS ASN ARG LEU GLU SEQRES 4 A 45 HIS HIS HIS HIS HIS HIS HELIX 1 AA1 SER A 3 SER A 33 1 31 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1