HEADER OXIDOREDUCTASE 14-JUN-20 6XEX TITLE STRUCTURE OF SERRATIA MARCESCENS 2,3-BUTANEDIOL DEHYDROGENASE MUTANT TITLE 2 Q247A/V139Q COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2,3-BUTANEDIOL DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-OXOACYL-ACP REDUCTASE,SDR FAMILY OXIDOREDUCTASE; COMPND 5 EC: 1.-.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SERRATIA MARCESCENS; SOURCE 3 ORGANISM_TAXID: 615; SOURCE 4 GENE: BUDC, A8A12_06140, FG174_10665; SOURCE 5 EXPRESSION_SYSTEM: ZYMOMONAS MOBILIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 542 KEYWDS BDH, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.M.ALAHUHTA,V.V.LUNIN REVDAT 2 18-OCT-23 6XEX 1 REMARK REVDAT 1 23-DEC-20 6XEX 0 JRNL AUTH V.SUBRAMANIAN,V.V.LUNIN,S.J.FARMER,M.ALAHUHTA,K.T.MOORE, JRNL AUTH 2 A.HO,Y.B.CHAUDHARI,M.ZHANG,M.E.HIMMEL,S.R.DECKER JRNL TITL PHYLOGENETICS-BASED IDENTIFICATION AND CHARACTERIZATION OF A JRNL TITL 2 SUPERIOR 2,3-BUTANEDIOL DEHYDROGENASE FOR ZYMOMONAS MOBILIS JRNL TITL 3 EXPRESSION. JRNL REF BIOTECHNOL BIOFUELS V. 13 186 2020 JRNL REFN ESSN 1754-6834 JRNL PMID 33292448 JRNL DOI 10.1186/S13068-020-01820-X REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 46636 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2318 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3227 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.2950 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3681 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 542 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13900 REMARK 3 B22 (A**2) : 0.13900 REMARK 3 B33 (A**2) : -0.27900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.119 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.871 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3897 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3668 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5293 ; 1.612 ; 1.625 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8460 ; 1.485 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 521 ; 7.613 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 183 ;31.716 ;22.186 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 612 ;13.216 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;20.824 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 515 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4525 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 808 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 823 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 128 ; 0.196 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1932 ; 0.161 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 402 ; 0.186 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 5 ; 0.189 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2063 ; 1.928 ; 2.196 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2062 ; 1.927 ; 2.195 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2591 ; 2.641 ; 3.289 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2592 ; 2.640 ; 3.290 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1834 ; 2.683 ; 2.556 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1835 ; 2.682 ; 2.557 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2702 ; 4.047 ; 3.691 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2703 ; 4.046 ; 3.692 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 6XEX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000250059. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6-7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : HELIOS MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : PROTEUM PLUS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46796 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 42.025 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 16.99 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09250 REMARK 200 FOR THE DATA SET : 21.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.79280 REMARK 200 FOR SHELL : 1.910 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4NI5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM MALONATE, PH 6-7, 6-15% REMARK 280 W/V PEG3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.55400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 54.40000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.33100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.40000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 54.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.77700 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.40000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.40000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.33100 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 54.40000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.40000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 20.77700 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 41.55400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -148.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 PHE A -1 REMARK 465 GLN A 0 REMARK 465 MET B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 GLU B -5 REMARK 465 ASN B -4 REMARK 465 LEU B -3 REMARK 465 VAL B 251 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET B 188 CG SD CE REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 105 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 137 -127.41 -88.38 REMARK 500 ALA A 148 54.49 -150.57 REMARK 500 SER A 182 -147.25 -90.77 REMARK 500 ILE B 112 -61.72 -103.53 REMARK 500 ALA B 137 -132.16 -84.59 REMARK 500 ALA B 148 55.28 -158.98 REMARK 500 SER B 182 -173.90 -65.08 REMARK 500 THR B 186 -153.29 -128.02 REMARK 500 THR B 189 -41.93 -133.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 674 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 675 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 666 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B 667 DISTANCE = 6.21 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 187 O REMARK 620 2 ASN A 190 OD1 81.5 REMARK 620 3 HOH A 485 O 83.6 93.7 REMARK 620 4 HOH A 621 O 92.1 91.6 172.6 REMARK 620 5 HOH A 631 O 99.1 172.5 79.0 95.8 REMARK 620 6 HOH B 421 O 171.2 104.8 89.8 93.9 73.8 REMARK 620 7 HOH B 421 O 144.4 67.9 115.2 71.7 113.6 44.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 182 OG REMARK 620 2 LEU B 183 O 118.6 REMARK 620 N 1 DBREF 6XEX A 2 251 UNP H9XP47 H9XP47_SERMA 2 251 DBREF 6XEX B 2 251 UNP H9XP47 H9XP47_SERMA 2 251 SEQADV 6XEX MET A -12 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS A -11 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS A -10 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS A -9 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS A -8 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS A -7 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS A -6 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX GLU A -5 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX ASN A -4 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX LEU A -3 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX TYR A -2 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX PHE A -1 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX GLN A 0 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX GLY A 1 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX GLN A 139 UNP H9XP47 VAL 139 ENGINEERED MUTATION SEQADV 6XEX ALA A 247 UNP H9XP47 GLN 247 ENGINEERED MUTATION SEQADV 6XEX MET B -12 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS B -11 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS B -10 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS B -9 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS B -8 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS B -7 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX HIS B -6 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX GLU B -5 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX ASN B -4 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX LEU B -3 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX TYR B -2 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX PHE B -1 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX GLN B 0 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX GLY B 1 UNP H9XP47 EXPRESSION TAG SEQADV 6XEX GLN B 139 UNP H9XP47 VAL 139 ENGINEERED MUTATION SEQADV 6XEX ALA B 247 UNP H9XP47 GLN 247 ENGINEERED MUTATION SEQRES 1 A 264 MET HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 A 264 GLY ARG PHE ASP ASN LYS VAL VAL VAL ILE THR GLY ALA SEQRES 3 A 264 GLY ASN GLY MET GLY GLU ALA ALA ALA ARG ARG PHE SER SEQRES 4 A 264 ALA GLU GLY ALA ILE VAL VAL LEU ALA ASP TRP ALA LYS SEQRES 5 A 264 GLU ALA VAL ASP LYS VAL ALA ALA SER LEU PRO LYS GLY SEQRES 6 A 264 ARG ALA MET ALA VAL HIS ILE ASP VAL SER ASP HIS VAL SEQRES 7 A 264 ALA VAL GLU LYS MET MET ASN GLU VAL ALA GLU LYS LEU SEQRES 8 A 264 GLY ARG ILE ASP VAL LEU LEU ASN ASN ALA GLY VAL HIS SEQRES 9 A 264 VAL ALA GLY SER VAL LEU GLU THR SER ILE ASP ASP TRP SEQRES 10 A 264 ARG ARG ILE ALA GLY VAL ASP ILE ASP GLY VAL VAL PHE SEQRES 11 A 264 CYS SER LYS PHE ALA LEU PRO HIS LEU LEU LYS THR LYS SEQRES 12 A 264 GLY CYS ILE VAL ASN THR ALA SER GLN SER GLY LEU GLY SEQRES 13 A 264 GLY ASP TRP GLY ALA ALA TYR TYR CYS ALA ALA LYS GLY SEQRES 14 A 264 ALA VAL VAL ASN LEU THR ARG ALA MET ALA LEU ASP HIS SEQRES 15 A 264 GLY GLY ASP GLY VAL ARG ILE ASN SER VAL CYS PRO SER SEQRES 16 A 264 LEU VAL LYS THR ASN MET THR ASN GLY TRP PRO GLN GLU SEQRES 17 A 264 ILE ARG ASP LYS PHE ASN GLU ARG ILE ALA LEU GLY ARG SEQRES 18 A 264 ALA ALA GLU PRO GLU GLU VAL ALA ALA VAL MET ALA PHE SEQRES 19 A 264 LEU ALA SER ASP ASP ALA SER PHE ILE ASN GLY ALA ASN SEQRES 20 A 264 ILE PRO VAL ASP GLY GLY ALA THR ALA SER ASP GLY ALA SEQRES 21 A 264 PRO LYS ILE VAL SEQRES 1 B 264 MET HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 B 264 GLY ARG PHE ASP ASN LYS VAL VAL VAL ILE THR GLY ALA SEQRES 3 B 264 GLY ASN GLY MET GLY GLU ALA ALA ALA ARG ARG PHE SER SEQRES 4 B 264 ALA GLU GLY ALA ILE VAL VAL LEU ALA ASP TRP ALA LYS SEQRES 5 B 264 GLU ALA VAL ASP LYS VAL ALA ALA SER LEU PRO LYS GLY SEQRES 6 B 264 ARG ALA MET ALA VAL HIS ILE ASP VAL SER ASP HIS VAL SEQRES 7 B 264 ALA VAL GLU LYS MET MET ASN GLU VAL ALA GLU LYS LEU SEQRES 8 B 264 GLY ARG ILE ASP VAL LEU LEU ASN ASN ALA GLY VAL HIS SEQRES 9 B 264 VAL ALA GLY SER VAL LEU GLU THR SER ILE ASP ASP TRP SEQRES 10 B 264 ARG ARG ILE ALA GLY VAL ASP ILE ASP GLY VAL VAL PHE SEQRES 11 B 264 CYS SER LYS PHE ALA LEU PRO HIS LEU LEU LYS THR LYS SEQRES 12 B 264 GLY CYS ILE VAL ASN THR ALA SER GLN SER GLY LEU GLY SEQRES 13 B 264 GLY ASP TRP GLY ALA ALA TYR TYR CYS ALA ALA LYS GLY SEQRES 14 B 264 ALA VAL VAL ASN LEU THR ARG ALA MET ALA LEU ASP HIS SEQRES 15 B 264 GLY GLY ASP GLY VAL ARG ILE ASN SER VAL CYS PRO SER SEQRES 16 B 264 LEU VAL LYS THR ASN MET THR ASN GLY TRP PRO GLN GLU SEQRES 17 B 264 ILE ARG ASP LYS PHE ASN GLU ARG ILE ALA LEU GLY ARG SEQRES 18 B 264 ALA ALA GLU PRO GLU GLU VAL ALA ALA VAL MET ALA PHE SEQRES 19 B 264 LEU ALA SER ASP ASP ALA SER PHE ILE ASN GLY ALA ASN SEQRES 20 B 264 ILE PRO VAL ASP GLY GLY ALA THR ALA SER ASP GLY ALA SEQRES 21 B 264 PRO LYS ILE VAL HET NAD A 301 44 HET NA A 302 1 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET NA B 301 1 HET EDO B 302 4 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM NA SODIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAD C21 H27 N7 O14 P2 FORMUL 4 NA 2(NA 1+) FORMUL 5 EDO 5(C2 H6 O2) FORMUL 11 HOH *542(H2 O) HELIX 1 AA1 ASN A 15 GLU A 28 1 14 HELIX 2 AA2 ALA A 38 LEU A 49 1 12 HELIX 3 AA3 ASP A 63 GLY A 79 1 17 HELIX 4 AA4 SER A 100 ILE A 112 1 13 HELIX 5 AA5 ILE A 112 LYS A 130 1 19 HELIX 6 AA6 SER A 138 GLY A 143 1 6 HELIX 7 AA7 ALA A 148 GLY A 170 1 23 HELIX 8 AA8 GLY A 171 GLY A 173 5 3 HELIX 9 AA9 PRO A 193 ILE A 204 1 12 HELIX 10 AB1 GLU A 211 SER A 224 1 14 HELIX 11 AB2 ASP A 225 SER A 228 5 4 HELIX 12 AB3 GLY A 240 SER A 244 5 5 HELIX 13 AB4 ASN B 15 GLU B 28 1 14 HELIX 14 AB5 LYS B 39 LEU B 49 1 11 HELIX 15 AB6 ASP B 63 GLY B 79 1 17 HELIX 16 AB7 SER B 100 ILE B 112 1 13 HELIX 17 AB8 ILE B 112 LYS B 130 1 19 HELIX 18 AB9 SER B 138 LEU B 142 5 5 HELIX 19 AC1 ALA B 148 GLY B 170 1 23 HELIX 20 AC2 GLY B 171 GLY B 173 5 3 HELIX 21 AC3 PRO B 193 ARG B 203 1 11 HELIX 22 AC4 GLU B 211 SER B 224 1 14 HELIX 23 AC5 ASP B 225 SER B 228 5 4 HELIX 24 AC6 GLY B 240 SER B 244 5 5 SHEET 1 AA1 7 ALA A 54 HIS A 58 0 SHEET 2 AA1 7 ILE A 31 ASP A 36 1 N LEU A 34 O MET A 55 SHEET 3 AA1 7 VAL A 7 THR A 11 1 N ILE A 10 O VAL A 33 SHEET 4 AA1 7 VAL A 83 ASN A 86 1 O LEU A 85 N VAL A 9 SHEET 5 AA1 7 CYS A 132 THR A 136 1 O THR A 136 N ASN A 86 SHEET 6 AA1 7 ARG A 175 PRO A 181 1 O ARG A 175 N ILE A 133 SHEET 7 AA1 7 ASN A 234 VAL A 237 1 O ILE A 235 N CYS A 180 SHEET 1 AA2 7 ALA B 54 HIS B 58 0 SHEET 2 AA2 7 ILE B 31 ASP B 36 1 N LEU B 34 O MET B 55 SHEET 3 AA2 7 VAL B 7 ILE B 10 1 N VAL B 8 O VAL B 33 SHEET 4 AA2 7 VAL B 83 ASN B 86 1 O LEU B 85 N VAL B 9 SHEET 5 AA2 7 CYS B 132 THR B 136 1 O VAL B 134 N LEU B 84 SHEET 6 AA2 7 ARG B 175 PRO B 181 1 O ASN B 177 N ASN B 135 SHEET 7 AA2 7 ASN B 234 VAL B 237 1 O ILE B 235 N CYS B 180 LINK O ASN A 187 NA NA A 302 1555 1555 2.27 LINK OD1 ASN A 190 NA NA A 302 1555 1555 2.49 LINK NA NA A 302 O HOH A 485 1555 1555 2.71 LINK NA NA A 302 O AHOH A 621 1555 1555 2.39 LINK NA NA A 302 O HOH A 631 1555 1555 2.67 LINK NA NA A 302 O AHOH B 421 1555 6555 2.24 LINK NA NA A 302 O BHOH B 421 1555 6555 2.40 LINK OG SER B 182 NA NA B 301 1555 1555 2.63 LINK O LEU B 183 NA NA B 301 1555 1555 2.05 CRYST1 108.800 108.800 83.108 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009191 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009191 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012033 0.00000