HEADER PROTEIN TRANSPORT 15-JUN-20 6XFL TITLE STRUCTURAL CHARACTERIZATION OF THE TYPE III SECRETION SYSTEM PILOTIN- TITLE 2 SECRETIN COMPLEX INVH-INVG BY NMR SPECTROSCOPY COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE 3 SECRETION SYSTEM PILOTIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: INVASION LIPOPROTEIN INVH; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TYPE 3 SECRETION SYSTEM SECRETIN; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: T3SS SECRETIN,PROTEIN INVG; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / SOURCE 3 ATCC 700720); SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2 / SGSC1412 / ATCC 700720; SOURCE 6 GENE: INVH, SCTG, STM2900; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM (STRAIN LT2 / SGSC1412 / SOURCE 11 ATCC 700720); SOURCE 12 ORGANISM_TAXID: 99287; SOURCE 13 STRAIN: LT2 / SGSC1412 / ATCC 700720; SOURCE 14 GENE: SCTC, INVG, STM2898; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PILOTIN, SECRETIN, CHAPERONE, TYPE III SECRETION, PROTEIN TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.D.MAJEWSKI,M.OKON,F.HEINKEL,C.S.ROBB,M.VUCKOVIC,L.P.MCINTOSH, AUTHOR 2 N.C.J.STRYNADKA REVDAT 4 15-MAY-24 6XFL 1 REMARK REVDAT 3 14-JUN-23 6XFL 1 REMARK REVDAT 2 17-FEB-21 6XFL 1 JRNL REVDAT 1 16-SEP-20 6XFL 0 JRNL AUTH D.D.MAJEWSKI,M.OKON,F.HEINKEL,C.S.ROBB,M.VUCKOVIC, JRNL AUTH 2 L.P.MCINTOSH,N.C.J.STRYNADKA JRNL TITL CHARACTERIZATION OF THE PILOTIN-SECRETIN COMPLEX FROM THE JRNL TITL 2 SALMONELLA ENTERICA TYPE III SECRETION SYSTEM USING HYBRID JRNL TITL 3 STRUCTURAL METHODS. JRNL REF STRUCTURE V. 29 125 2021 JRNL REFN ISSN 0969-2126 JRNL PMID 32877645 JRNL DOI 10.1016/J.STR.2020.08.006 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.98.13, CYANA 3.98.13 REMARK 3 AUTHORS : GUNTERT P. (CYANA), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XFL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000250093. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 20 MM NA- MOPS, 150 MM NA- REMARK 210 SODIUM CHLORIDE, 0.2 MM NA- TCEP, REMARK 210 10 % V/V NA- D2O, 90% H2O/10% REMARK 210 D2O; 20 MM NA- MOPS, 150 MM NA- REMARK 210 SODIUM CHLORIDE, 0.2 MM NA- TCEP, REMARK 210 10 % V/V NA- D2O, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCACB; 3D CBCA(CO)NH; 3D HN(CA) REMARK 210 CO; 3D HCCH-TOCSY; 3D HCC(CO)NH- REMARK 210 TOCSY; 2D 1H-13C HSQC; 3D REMARK 210 HBHA(CBCACO)NH; 3D HBCBCGCDHD; REMARK 210 3D HBCBCGCDCEHE; 3D HBCBCGCCH; REMARK 210 3D 1H-13C NOESY; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY FILTERED-EDITED; REMARK 210 3D 1H-15N NOESY FILTERED-EDITED; REMARK 210 3D 1H-13C NOESY ALIPHATIC; 3D REMARK 210 1H-13C NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRFAM-SPARKY REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 66 REMARK 465 SER A 67 REMARK 465 HIS A 68 REMARK 465 GLY B 516 REMARK 465 SER B 517 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 78 38.25 -99.27 REMARK 500 1 ILE A 79 77.98 -106.89 REMARK 500 1 PRO A 103 73.27 -69.70 REMARK 500 1 GLN B 558 -49.67 -139.83 REMARK 500 2 SER A 72 -69.87 -134.89 REMARK 500 2 ILE A 79 -39.84 -130.90 REMARK 500 2 SER A 128 49.71 -84.38 REMARK 500 2 LEU B 522 -168.46 -173.53 REMARK 500 2 GLU B 528 -72.80 -134.89 REMARK 500 2 SER B 529 77.27 -111.98 REMARK 500 2 ASN B 532 148.83 -177.17 REMARK 500 2 SER B 537 146.24 -179.31 REMARK 500 2 SER B 541 133.06 -178.06 REMARK 500 2 GLN B 558 -49.92 -139.01 REMARK 500 3 SER A 81 119.41 -178.72 REMARK 500 3 PRO A 103 81.96 -69.76 REMARK 500 3 SER A 128 49.88 -84.69 REMARK 500 3 LEU B 522 -169.04 -173.09 REMARK 500 3 GLU B 528 -73.99 -98.30 REMARK 500 3 SER B 537 -71.57 -108.70 REMARK 500 3 SER B 541 -42.25 -150.27 REMARK 500 3 GLN B 558 -48.96 -138.14 REMARK 500 4 ALA A 78 35.97 -95.04 REMARK 500 4 PRO A 103 73.87 -69.71 REMARK 500 4 GLN B 558 -75.17 -129.17 REMARK 500 5 SER A 72 -63.21 -98.25 REMARK 500 5 SER A 80 -74.25 -66.68 REMARK 500 5 SER A 82 108.77 -53.77 REMARK 500 5 PRO A 103 78.11 -69.76 REMARK 500 5 SER A 128 49.20 -86.00 REMARK 500 5 LEU B 534 172.58 -53.49 REMARK 500 5 GLN B 536 66.64 -107.60 REMARK 500 5 SER B 541 -41.51 -137.42 REMARK 500 5 GLN B 558 -74.20 -131.82 REMARK 500 6 PRO A 103 80.37 -69.70 REMARK 500 6 ASP B 525 -175.47 -172.96 REMARK 500 6 GLU B 528 -69.80 -127.24 REMARK 500 6 SER B 529 58.16 -115.42 REMARK 500 6 GLN B 558 -50.28 -135.14 REMARK 500 7 LYS A 75 175.28 -56.44 REMARK 500 7 ALA A 78 42.62 -93.36 REMARK 500 7 SER A 81 73.04 -115.78 REMARK 500 7 PRO A 103 73.37 -69.80 REMARK 500 7 SER A 128 49.53 -84.00 REMARK 500 7 GLU B 528 -166.40 -69.52 REMARK 500 7 SER B 529 85.73 -67.41 REMARK 500 7 SER B 537 147.48 -175.95 REMARK 500 7 GLN B 558 -63.65 -120.63 REMARK 500 7 GLU B 559 -171.07 -175.07 REMARK 500 8 SER A 74 -74.26 -126.65 REMARK 500 REMARK 500 THIS ENTRY HAS 159 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30765 RELATED DB: BMRB REMARK 900 STRUCTURAL CHARACTERIZATION OF THE TYPE III SECRETION SYSTEM REMARK 900 PILOTIN-SECRETIN COMPLEX INVH-INVG BY NMR SPECTROSCOPY DBREF 6XFL A 70 147 UNP P0CL43 INVH_SALTY 70 147 DBREF 6XFL B 520 562 UNP P35672 SCTC_SALTY 520 562 SEQADV 6XFL GLY A 66 UNP P0CL43 EXPRESSION TAG SEQADV 6XFL SER A 67 UNP P0CL43 EXPRESSION TAG SEQADV 6XFL HIS A 68 UNP P0CL43 EXPRESSION TAG SEQADV 6XFL MET A 69 UNP P0CL43 EXPRESSION TAG SEQADV 6XFL GLY B 516 UNP P35672 EXPRESSION TAG SEQADV 6XFL SER B 517 UNP P35672 EXPRESSION TAG SEQADV 6XFL HIS B 518 UNP P35672 EXPRESSION TAG SEQADV 6XFL MET B 519 UNP P35672 EXPRESSION TAG SEQRES 1 A 82 GLY SER HIS MET ASP ASN SER ALA SER LYS ASN SER ALA SEQRES 2 A 82 ILE SER SER SER ILE PHE CYS GLU LYS TYR LYS GLN THR SEQRES 3 A 82 LYS GLU GLN ALA LEU THR PHE PHE GLN GLU HIS PRO GLN SEQRES 4 A 82 TYR MET ARG SER LYS GLU ASP GLU GLU GLN LEU MET THR SEQRES 5 A 82 GLU PHE LYS LYS VAL LEU LEU GLU PRO GLY SER LYS ASN SEQRES 6 A 82 LEU SER ILE TYR GLN THR LEU LEU ALA ALA HIS GLU ARG SEQRES 7 A 82 LEU GLN ALA LEU SEQRES 1 B 47 GLY SER HIS MET ASP PRO LEU THR PRO ASP ALA SER GLU SEQRES 2 B 47 SER VAL ASN ASN ILE LEU LYS GLN SER GLY ALA TRP SER SEQRES 3 B 47 GLY ASP ASP LYS LEU GLN LYS TRP VAL ARG VAL TYR LEU SEQRES 4 B 47 ASP ARG GLY GLN GLU ALA ILE LYS HELIX 1 AA1 SER A 82 HIS A 102 1 21 HELIX 2 AA2 PRO A 103 SER A 108 1 6 HELIX 3 AA3 SER A 108 GLU A 125 1 18 HELIX 4 AA4 SER A 132 GLN A 145 1 14 HELIX 5 AA5 ASP B 543 GLN B 558 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1