HEADER OXIDOREDUCTASE 18-JUN-20 6XH9 TITLE CRYSTAL STRUCTURE OF S. AUREUS TARJ COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBULOSE-5-PHOSPHATE REDUCTASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TARJ, RIBULOSE-5-P REDUCTASE 1,RIBITOL-5-PHOSPHATE COMPND 5 DEHYDROGENASE 1; COMPND 6 EC: 1.1.1.405; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: TARJ, SAOUHSC_00226; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ALCOHOL DEHYDROGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR F.K.K.LI,N.C.J.STRYNADKA REVDAT 3 18-OCT-23 6XH9 1 REMARK REVDAT 2 05-MAY-21 6XH9 1 JRNL REVDAT 1 21-APR-21 6XH9 0 JRNL AUTH F.K.K.LI,R.T.GALE,E.V.PETROTCHENKO,C.H.BORCHERS,E.D.BROWN, JRNL AUTH 2 N.C.J.STRYNADKA JRNL TITL CRYSTALLOGRAPHIC ANALYSIS OF TARI AND TARJ, A JRNL TITL 2 CYTIDYLYLTRANSFERASE AND REDUCTASE PAIR FOR CDP-RIBITOL JRNL TITL 3 SYNTHESIS IN STAPHYLOCOCCUS AUREUS WALL TEICHOIC ACID JRNL TITL 4 BIOGENESIS. JRNL REF J.STRUCT.BIOL. V. 213 07733 2021 JRNL REFN ESSN 1095-8657 JRNL PMID 33819634 JRNL DOI 10.1016/J.JSB.2021.107733 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13732 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9090 - 5.4703 1.00 2805 148 0.2135 0.2541 REMARK 3 2 5.4703 - 4.3428 1.00 2609 138 0.1772 0.1834 REMARK 3 3 4.3428 - 3.7941 1.00 2573 135 0.1886 0.2422 REMARK 3 4 3.7941 - 3.4473 1.00 2529 133 0.2299 0.2675 REMARK 3 5 3.4473 - 3.2002 1.00 2529 133 0.2824 0.2956 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 109.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2425 REMARK 3 ANGLE : 1.202 3310 REMARK 3 CHIRALITY : 0.076 387 REMARK 3 PLANARITY : 0.010 424 REMARK 3 DIHEDRAL : 2.860 1405 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8093 6.3788 11.3867 REMARK 3 T TENSOR REMARK 3 T11: 0.9880 T22: 0.6495 REMARK 3 T33: 0.8240 T12: 0.1416 REMARK 3 T13: -0.1260 T23: -0.1456 REMARK 3 L TENSOR REMARK 3 L11: 3.9918 L22: 5.4528 REMARK 3 L33: 3.2375 L12: 1.4594 REMARK 3 L13: -1.3583 L23: -0.1808 REMARK 3 S TENSOR REMARK 3 S11: -0.1552 S12: -0.2852 S13: -0.0953 REMARK 3 S21: -0.0523 S22: -0.1804 S23: -0.5321 REMARK 3 S31: -0.3796 S32: -0.4874 S33: 0.3115 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 137 THROUGH 265 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1121 26.1935 32.5481 REMARK 3 T TENSOR REMARK 3 T11: 1.1976 T22: 0.6866 REMARK 3 T33: 0.8082 T12: 0.4236 REMARK 3 T13: 0.0089 T23: -0.0557 REMARK 3 L TENSOR REMARK 3 L11: 4.3067 L22: 4.1219 REMARK 3 L33: 3.3494 L12: -1.3645 REMARK 3 L13: 0.8322 L23: 0.4395 REMARK 3 S TENSOR REMARK 3 S11: 0.0750 S12: 0.1099 S13: 0.0865 REMARK 3 S21: 0.1321 S22: 0.0351 S23: 0.0652 REMARK 3 S31: -0.4987 S32: -0.4974 S33: -0.1380 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 266 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7594 19.6036 19.1810 REMARK 3 T TENSOR REMARK 3 T11: 1.3508 T22: 0.7385 REMARK 3 T33: 0.9454 T12: 0.4499 REMARK 3 T13: -0.0187 T23: -0.0440 REMARK 3 L TENSOR REMARK 3 L11: 0.6433 L22: 1.2029 REMARK 3 L33: 5.1589 L12: -0.5124 REMARK 3 L13: -1.3642 L23: 2.0983 REMARK 3 S TENSOR REMARK 3 S11: 0.2229 S12: 0.3930 S13: 0.2866 REMARK 3 S21: -0.2837 S22: 0.1537 S23: -0.3947 REMARK 3 S31: -1.4144 S32: -0.5749 S33: -0.2997 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XH9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000250159. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13739 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 48.909 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 18.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.32 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.460 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4ILK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.1 M AMMONIUM PHOSPHATE MONOBASIC, REMARK 280 0.1 M SODIUM CITRATE PH 5.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 178.95200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 89.47600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 178.95200 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.47600 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 178.95200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 89.47600 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 178.95200 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 89.47600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 89.47600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 48 REMARK 465 ARG A 49 REMARK 465 ASP A 50 REMARK 465 GLU A 51 REMARK 465 ASN A 52 REMARK 465 VAL A 53 REMARK 465 LEU A 54 REMARK 465 SER A 55 REMARK 465 GLN A 56 REMARK 465 THR A 92 REMARK 465 GLU A 93 REMARK 465 LYS A 94 REMARK 465 ASP A 95 REMARK 465 ASP A 96 REMARK 465 VAL A 97 REMARK 465 ILE A 98 REMARK 465 ALA A 99 REMARK 465 GLU A 100 REMARK 465 ASN A 101 REMARK 465 TYR A 102 REMARK 465 LEU A 103 REMARK 465 LYS A 104 REMARK 465 SER A 105 REMARK 465 SER A 106 REMARK 465 TYR A 107 REMARK 465 PHE A 108 REMARK 465 ARG A 109 REMARK 465 SER A 110 REMARK 465 SER A 111 REMARK 465 GLY A 112 REMARK 465 HIS A 113 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 12 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 43 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 LEU A 58 CG CD1 CD2 REMARK 470 LYS A 75 CG CD CE NZ REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 ARG A 127 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 ASN A 163 CG OD1 ND2 REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 GLU A 189 CG CD OE1 OE2 REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 ARG A 233 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 267 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 281 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 285 CG CD CE NZ REMARK 470 LYS A 303 CG CD CE NZ REMARK 470 LYS A 308 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A 18 OH TYR A 18 11655 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 13 113.91 -160.19 REMARK 500 TYR A 142 57.83 -98.02 REMARK 500 ASP A 172 33.75 -96.24 REMARK 500 SER A 280 -110.42 -129.91 REMARK 500 REMARK 500 REMARK: NULL DBREF 6XH9 A 1 341 UNP Q2G1B9 TARJ1_STAA8 1 341 SEQRES 1 A 341 MET ILE ASN GLN VAL TYR GLN LEU VAL ALA PRO ARG GLN SEQRES 2 A 341 PHE GLU VAL THR TYR ASN ASN VAL ASP ILE TYR SER ASP SEQRES 3 A 341 TYR VAL ILE VAL ARG PRO LEU TYR MET SER ILE CME ALA SEQRES 4 A 341 ALA ASP GLN ARG TYR TYR THR GLY SER ARG ASP GLU ASN SEQRES 5 A 341 VAL LEU SER GLN LYS LEU PRO MET SER LEU ILE HIS GLU SEQRES 6 A 341 GLY VAL GLY GLU VAL VAL PHE ASP SER LYS GLY VAL PHE SEQRES 7 A 341 ASN LYS GLY THR LYS VAL VAL MET VAL PRO ASN THR PRO SEQRES 8 A 341 THR GLU LYS ASP ASP VAL ILE ALA GLU ASN TYR LEU LYS SEQRES 9 A 341 SER SER TYR PHE ARG SER SER GLY HIS ASP GLY PHE MET SEQRES 10 A 341 GLN ASP PHE VAL LEU LEU ASN HIS ASP ARG ALA VAL PRO SEQRES 11 A 341 LEU PRO ASP ASP ILE ASP LEU SER ILE ILE SER TYR THR SEQRES 12 A 341 GLU LEU VAL THR VAL SER LEU HIS ALA ILE ARG ARG PHE SEQRES 13 A 341 GLU LYS LYS SER ILE SER ASN LYS ASN THR PHE GLY ILE SEQRES 14 A 341 TRP GLY ASP GLY ASN LEU GLY TYR ILE THR ALA ILE LEU SEQRES 15 A 341 LEU ARG LYS LEU TYR PRO GLU SER LYS ILE TYR VAL PHE SEQRES 16 A 341 GLY LYS THR ASP TYR LYS LEU SER HIS PHE SER PHE VAL SEQRES 17 A 341 ASP ASP VAL PHE PHE ILE ASN LYS ILE PRO GLU GLY LEU SEQRES 18 A 341 THR PHE ASP HIS ALA PHE GLU CYS VAL GLY GLY ARG GLY SEQRES 19 A 341 SER GLN SER ALA ILE ASN GLN MET ILE ASP TYR ILE SER SEQRES 20 A 341 PRO GLU GLY SER ILE ALA LEU LEU GLY VAL SER GLU PHE SEQRES 21 A 341 PRO VAL GLU VAL ASN THR ARG LEU VAL LEU GLU LYS GLY SEQRES 22 A 341 LEU THR LEU ILE GLY SER SER ARG SER GLY SER LYS ASP SEQRES 23 A 341 PHE GLN ASP VAL VAL ASP LEU TYR ILE GLN TYR PRO ASP SEQRES 24 A 341 ILE VAL ASP LYS LEU ALA LEU LEU LYS GLY GLN GLU PHE SEQRES 25 A 341 GLU ILE ALA THR ILE ASN ASP LEU THR GLU ALA PHE GLU SEQRES 26 A 341 ALA ASP LEU SER THR SER TRP GLY LYS THR VAL LEU LYS SEQRES 27 A 341 TRP ILE MET MODRES 6XH9 CME A 38 CYS MODIFIED RESIDUE HET CME A 38 10 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE FORMUL 1 CME C5 H11 N O3 S2 HELIX 1 AA1 CME A 38 GLY A 47 1 10 HELIX 2 AA2 ASN A 124 ASP A 126 5 3 HELIX 3 AA3 ASP A 136 SER A 141 1 6 HELIX 4 AA4 TYR A 142 PHE A 156 1 15 HELIX 5 AA5 GLU A 157 ILE A 161 5 5 HELIX 6 AA6 GLY A 173 TYR A 187 1 15 HELIX 7 AA7 THR A 198 SER A 203 1 6 HELIX 8 AA8 ARG A 233 ILE A 246 1 14 HELIX 9 AA9 ASN A 265 GLY A 273 1 9 HELIX 10 AB1 GLY A 283 TYR A 297 1 15 HELIX 11 AB2 PRO A 298 LEU A 306 1 9 HELIX 12 AB3 THR A 316 THR A 330 1 15 SHEET 1 AA1 2 ILE A 2 ALA A 10 0 SHEET 2 AA1 2 GLN A 13 ASN A 20 -1 O ASN A 19 N ASN A 3 SHEET 1 AA2 5 VAL A 121 LEU A 123 0 SHEET 2 AA2 5 VAL A 28 SER A 36 -1 N VAL A 30 O VAL A 121 SHEET 3 AA2 5 GLU A 65 PHE A 72 -1 O GLU A 69 N ARG A 31 SHEET 4 AA2 5 LYS A 83 MET A 86 -1 O VAL A 84 N GLY A 68 SHEET 5 AA2 5 ALA A 128 PRO A 130 -1 O VAL A 129 N VAL A 85 SHEET 1 AA3 4 VAL A 121 LEU A 123 0 SHEET 2 AA3 4 VAL A 28 SER A 36 -1 N VAL A 30 O VAL A 121 SHEET 3 AA3 4 LYS A 334 TRP A 339 -1 O LEU A 337 N MET A 35 SHEET 4 AA3 4 LYS A 308 ILE A 314 1 N PHE A 312 O LYS A 338 SHEET 1 AA4 6 ASP A 210 PHE A 213 0 SHEET 2 AA4 6 LYS A 191 GLY A 196 1 N VAL A 194 O PHE A 212 SHEET 3 AA4 6 THR A 166 TRP A 170 1 N ILE A 169 O PHE A 195 SHEET 4 AA4 6 HIS A 225 GLU A 228 1 O PHE A 227 N TRP A 170 SHEET 5 AA4 6 SER A 251 LEU A 254 1 O ALA A 253 N GLU A 228 SHEET 6 AA4 6 THR A 275 GLY A 278 1 O ILE A 277 N ILE A 252 LINK C ILE A 37 N CME A 38 1555 1555 1.32 LINK C CME A 38 N ALA A 39 1555 1555 1.33 CRYST1 99.483 99.483 268.428 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010052 0.005804 0.000000 0.00000 SCALE2 0.000000 0.011607 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003725 0.00000