HEADER OXIDOREDUCTASE 22-JUN-20 6XIZ TITLE CRYSTAL STRUCTURE OF MULTI-COPPER OXIDASE FROM PEDIOCOCCUS TITLE 2 ACIDILACTICI COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER OXIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PEDIOCOCCUS ACIDILACTICI; SOURCE 3 ORGANISM_TAXID: 1254; SOURCE 4 GENE: BTW26_06860, FEZ49_06610; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE, LACCASE, COPPER OXIDASE, ACOUSTIC DROPLET EJECTION, KEYWDS 2 LIGNIN, COMBINATORIAL CRYSTALLIZATION EXPDTA X-RAY DIFFRACTION AUTHOR I.PARDO,A.S.SOARES,R.COLLINS,S.H.PARTOWMAH,E.A.COLER REVDAT 3 06-MAR-24 6XIZ 1 REMARK REVDAT 2 12-MAY-21 6XIZ 1 JRNL REVDAT 1 10-MAR-21 6XIZ 0 JRNL AUTH I.OLMEDA,P.CASINO,R.E.COLLINS,R.SENDRA,S.CALLEJON,J.HUESA, JRNL AUTH 2 A.S.SOARES,S.FERRER,I.PARDO JRNL TITL STRUCTURAL ANALYSIS AND BIOCHEMICAL PROPERTIES OF LACCASE JRNL TITL 2 ENZYMES FROM TWO PEDIOCOCCUS SPECIES. JRNL REF MICROB BIOTECHNOL V. 14 1026 2021 JRNL REFN ISSN 1751-7915 JRNL PMID 33635570 JRNL DOI 10.1111/1751-7915.13751 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 92098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.116 REMARK 3 R VALUE (WORKING SET) : 0.114 REMARK 3 FREE R VALUE : 0.161 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4742 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6827 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.3740 REMARK 3 BIN FREE R VALUE SET COUNT : 305 REMARK 3 BIN FREE R VALUE : 0.4180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7622 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 609 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.44000 REMARK 3 B22 (A**2) : -0.23000 REMARK 3 B33 (A**2) : -0.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.144 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.089 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.337 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.988 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.980 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7913 ; 0.030 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7316 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10777 ; 2.579 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16870 ; 1.275 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 959 ; 7.573 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 404 ;38.007 ;24.629 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1276 ;18.097 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;17.055 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1143 ; 0.200 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 9063 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1865 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3824 ; 5.978 ; 4.221 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3823 ; 5.958 ; 4.219 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4787 ; 6.613 ; 6.319 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4788 ; 6.614 ; 6.321 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4089 ; 9.229 ; 4.901 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 4090 ; 9.229 ; 4.901 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5991 ; 9.509 ; 7.077 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9098 ; 8.301 ;35.528 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8879 ; 8.226 ;35.148 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 15229 ; 6.057 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 229 ;29.463 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 15396 ;18.229 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6XIZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000247080. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9202 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 98773 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 73.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 25.53 REMARK 200 R MERGE (I) : 0.18500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42630 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 52.5 NL DROP COMPOSED OF 95 MM SODIUM REMARK 280 CITRATE BUFFER, PH 3.0, 3% POLYETHYLENE GLYCOL 8000, 7.8% REMARK 280 POLYETHYLENE GLYCOL 400, 1.2% DIMETHYL SULFOXIDE, 114 MM REMARK 280 BENZAMIDINE HYDROCHLORIDE, AND 5.0-10.0 MG/ML PROTEIN IN 5 MM REMARK 280 TRIS-HCL PH 7.2 MYLAR WAS INITIALLY USED AS THE SURFACE, REMARK 280 RESULTING IN THIN POLYCRYSTALLINE NEEDLES. CHANGING THE SURFACE REMARK 280 TO COC (CYCLIC OLEFIN COPOLYMER) RESULTED IN LARGE HIGH-QUALITY REMARK 280 SINGLE CRYSTALS., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 73.65000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 472 REMARK 465 MET B 473 REMARK 465 ASN B 474 REMARK 465 HIS B 475 REMARK 465 LYS B 476 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 745 O HOH A 898 1.92 REMARK 500 O HOH B 819 O HOH B 850 1.97 REMARK 500 CB THR A 167 O HOH A 601 2.06 REMARK 500 OG1 THR A 167 O HOH A 601 2.07 REMARK 500 CG LEU A 357 O HOH A 827 2.12 REMARK 500 O HOH B 848 O HOH B 889 2.13 REMARK 500 O GLY A 181 O HOH A 602 2.13 REMARK 500 CG2 ILE A 142 O HOH A 881 2.14 REMARK 500 NH2 ARG A 178 O HOH A 603 2.15 REMARK 500 O HOH A 642 O HOH A 850 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 872 O HOH B 846 21056 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 19 CG TYR A 19 CD2 -0.082 REMARK 500 TYR A 50 CG TYR A 50 CD2 -0.080 REMARK 500 TYR A 50 CE1 TYR A 50 CZ -0.085 REMARK 500 GLU A 96 CD GLU A 96 OE1 0.081 REMARK 500 GLU A 96 CD GLU A 96 OE2 0.090 REMARK 500 GLU A 115 CD GLU A 115 OE2 0.073 REMARK 500 ARG A 242 CG ARG A 242 CD -0.154 REMARK 500 THR A 342 CB THR A 342 CG2 -0.216 REMARK 500 GLU B 58 CG GLU B 58 CD 0.098 REMARK 500 GLU B 96 CB GLU B 96 CG 0.128 REMARK 500 THR B 102 CB THR B 102 CG2 -0.238 REMARK 500 GLU B 128 CD GLU B 128 OE2 -0.070 REMARK 500 GLU B 244 CD GLU B 244 OE1 0.095 REMARK 500 SER B 260 CB SER B 260 OG 0.104 REMARK 500 GLU B 327 CD GLU B 327 OE1 0.086 REMARK 500 GLU B 327 CD GLU B 327 OE2 0.176 REMARK 500 GLY B 346 C GLY B 346 O 0.097 REMARK 500 GLU B 412 CD GLU B 412 OE1 0.066 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 20 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ASP A 136 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 168 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 191 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP A 206 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 VAL A 221 N - CA - CB ANGL. DEV. = -16.3 DEGREES REMARK 500 VAL A 221 CG1 - CB - CG2 ANGL. DEV. = 12.1 DEGREES REMARK 500 ARG A 246 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 MET A 271 CG - SD - CE ANGL. DEV. = -10.0 DEGREES REMARK 500 THR A 301 CB - CA - C ANGL. DEV. = -19.5 DEGREES REMARK 500 ARG A 352 CG - CD - NE ANGL. DEV. = -13.9 DEGREES REMARK 500 ARG A 352 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 352 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 ARG A 403 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP A 450 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 463 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 13 CB - CG - OD1 ANGL. DEV. = -6.9 DEGREES REMARK 500 ASP B 13 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 LEU B 32 CB - CG - CD2 ANGL. DEV. = 12.5 DEGREES REMARK 500 ARG B 42 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 THR B 101 CB - CA - C ANGL. DEV. = -21.8 DEGREES REMARK 500 THR B 102 N - CA - CB ANGL. DEV. = -13.0 DEGREES REMARK 500 THR B 167 CB - CA - C ANGL. DEV. = -17.3 DEGREES REMARK 500 ARG B 192 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 VAL B 221 N - CA - CB ANGL. DEV. = -15.2 DEGREES REMARK 500 VAL B 221 CG1 - CB - CG2 ANGL. DEV. = 13.1 DEGREES REMARK 500 ARG B 235 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG B 242 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 243 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 MET B 271 CA - CB - CG ANGL. DEV. = 13.7 DEGREES REMARK 500 MET B 271 CG - SD - CE ANGL. DEV. = -16.4 DEGREES REMARK 500 ARG B 281 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ILE B 328 CG1 - CB - CG2 ANGL. DEV. = -14.8 DEGREES REMARK 500 MET B 344 CG - SD - CE ANGL. DEV. = -16.1 DEGREES REMARK 500 ARG B 352 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 77 -127.80 56.36 REMARK 500 HIS A 126 -0.80 71.29 REMARK 500 HIS A 147 38.19 -143.22 REMARK 500 LYS A 175 50.98 -92.87 REMARK 500 ARG A 178 16.22 -140.30 REMARK 500 VAL A 182 -51.01 -127.43 REMARK 500 ARG A 242 -41.10 -154.26 REMARK 500 ALA A 279 -3.93 76.69 REMARK 500 ASP A 302 -128.67 51.82 REMARK 500 LEU A 320 99.80 51.65 REMARK 500 GLU A 335 -5.63 60.46 REMARK 500 ASP A 348 -135.80 55.26 REMARK 500 ASP A 463 48.14 33.57 REMARK 500 HIS A 464 51.35 -151.87 REMARK 500 HIS A 469 70.76 -107.60 REMARK 500 TYR B 12 153.53 -49.52 REMARK 500 ASP B 13 -70.29 -2.74 REMARK 500 LEU B 77 -121.98 54.71 REMARK 500 HIS B 147 38.21 -146.60 REMARK 500 PRO B 150 44.97 -105.92 REMARK 500 ARG B 242 -47.15 -148.97 REMARK 500 ALA B 279 -7.34 90.64 REMARK 500 ASP B 302 -126.25 45.57 REMARK 500 LEU B 321 125.42 65.77 REMARK 500 ASN B 336 -8.89 77.14 REMARK 500 ASP B 348 -138.16 55.03 REMARK 500 PHE B 358 136.87 -39.48 REMARK 500 ASN B 424 18.97 55.57 REMARK 500 HIS B 464 39.45 -150.89 REMARK 500 HIS B 469 -57.11 -120.08 REMARK 500 LEU B 470 -80.35 93.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 335 ASN A 336 140.59 REMARK 500 ASP A 463 HIS A 464 138.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 242 0.10 SIDE CHAIN REMARK 500 ARG B 242 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 503 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 104 NE2 REMARK 620 2 HIS A 392 NE2 163.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 C2O A 502 CU2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 106 ND1 REMARK 620 2 C2O A 502 O1 111.2 REMARK 620 3 HIS A 145 NE2 131.2 99.9 REMARK 620 4 HIS A 444 NE2 109.5 89.0 107.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 C2O A 502 CU3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 147 NE2 REMARK 620 2 C2O A 502 O1 111.5 REMARK 620 3 HIS A 394 NE2 110.4 112.7 REMARK 620 4 HIS A 442 NE2 112.4 104.9 104.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 501 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 389 ND1 REMARK 620 2 CYS A 443 SG 123.3 REMARK 620 3 HIS A 448 ND1 115.1 118.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 503 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 104 NE2 REMARK 620 2 HIS B 392 NE2 164.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 C2O B 502 CU2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 106 ND1 REMARK 620 2 C2O B 502 O1 108.8 REMARK 620 3 HIS B 145 NE2 136.6 92.9 REMARK 620 4 HIS B 444 NE2 104.2 92.4 112.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 C2O B 502 CU3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 147 NE2 REMARK 620 2 C2O B 502 O1 108.8 REMARK 620 3 HIS B 394 NE2 105.8 109.2 REMARK 620 4 HIS B 442 NE2 113.4 112.0 107.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 501 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 389 ND1 REMARK 620 2 CYS B 443 SG 124.4 REMARK 620 3 HIS B 448 ND1 107.7 124.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2O A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C2O B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEN B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6VOW RELATED DB: PDB REMARK 900 COPPER OXIDASE SOLVED DURING THIS PROJECT REMARK 900 RELATED ID: 6VOX RELATED DB: PDB REMARK 900 COPPER OXIDASE SOLVED DURING THIS PROJECT DBREF1 6XIZ A 1 476 UNP A0A1A5VCP7_PEDAC DBREF2 6XIZ A A0A1A5VCP7 1 476 DBREF1 6XIZ B 1 476 UNP A0A1A5VCP7_PEDAC DBREF2 6XIZ B A0A1A5VCP7 1 476 SEQADV 6XIZ SER A 0 UNP A0A1A5VCP EXPRESSION TAG SEQADV 6XIZ LYS A 270 UNP A0A1A5VCP GLU 270 CONFLICT SEQADV 6XIZ SER B 0 UNP A0A1A5VCP EXPRESSION TAG SEQADV 6XIZ LYS B 270 UNP A0A1A5VCP GLU 270 CONFLICT SEQRES 1 A 477 SER MET ILE THR LYS TYR LEU TYR ASP GLU ASN ALA TYR SEQRES 2 A 477 ASP TYR HIS ASP GLY GLY TYR ARG PRO LEU LYS LYS ALA SEQRES 3 A 477 PRO GLY GLU GLU HIS PRO LEU ASN VAL PRO ALA PHE LEU SEQRES 4 A 477 LYS PRO ASP ARG ILE GLU GLY ASN GLU ILE TYR TYR THR SEQRES 5 A 477 VAL THR ALA GLN ALA GLY GLU THR LYS ILE LEU PRO GLY SEQRES 6 A 477 LYS PRO THR HIS THR TRP GLY TYR ASN GLY SER ILE LEU SEQRES 7 A 477 GLY PRO ALA ILE GLN PHE GLU THR GLY LYS THR TYR HIS SEQRES 8 A 477 VAL THR LEU LYS ASN GLU LEU ASP GLU VAL THR THR PHE SEQRES 9 A 477 HIS TRP HIS GLY LEU ASN ILE VAL GLY PRO TYR GLU ASP SEQRES 10 A 477 GLY GLY PRO HIS ALA PRO VAL TYR PRO HIS GLY GLU ARG SEQRES 11 A 477 LYS ILE THR PHE THR VAL ASP GLN PRO ALA ALA ASN ILE SEQRES 12 A 477 TRP LEU HIS PRO HIS PRO CYS PRO GLU THR ALA ARG GLN SEQRES 13 A 477 VAL TRP ASN GLY LEU ALA ALA PRO VAL ILE ILE THR ASP SEQRES 14 A 477 GLY HIS GLU GLN SER LEU LYS LEU PRO ARG ARG TRP GLY SEQRES 15 A 477 VAL ASN ASP PHE PRO VAL VAL LEU GLN ASP ARG SER TYR SEQRES 16 A 477 HIS ASP ASN GLN LEU ASP TYR LYS ALA ASP TYR ASP VAL SEQRES 17 A 477 ASP GLY THR LEU GLY ASP TYR ALA LEU VAL ASN GLY THR SEQRES 18 A 477 VAL ASN PRO VAL VAL ASN VAL THR LYS PRO ILE VAL ARG SEQRES 19 A 477 LEU ARG PHE LEU ASN GLY SER ASN ARG ARG GLU TRP ARG SEQRES 20 A 477 LEU HIS PHE ALA ASP TYR HIS PRO PHE THR GLN ILE GLY SEQRES 21 A 477 SER ASP GLY GLY LEU LEU PRO GLU ALA VAL LYS MET ASP SEQRES 22 A 477 ARG ILE MET LEU THR CYS ALA GLU ARG ALA ASP VAL LEU SEQRES 23 A 477 VAL ASN PHE SER ASP TYR GLN PRO GLY GLN GLU VAL ILE SEQRES 24 A 477 LEU GLN THR ASP ASP PHE ASP LEU ILE LYS PHE LYS ILE SEQRES 25 A 477 GLY ASP ILE LYS LYS GLU ASN MET LEU LEU PRO SER PRO SEQRES 26 A 477 LEU ALA GLU ILE PRO ALA LEU SER VAL ASP GLU ASN THR SEQRES 27 A 477 PRO VAL PHE LYS THR VAL MET SER GLY MET ASP ASP GLN SEQRES 28 A 477 VAL ARG LEU ASP GLY LYS LEU PHE ASP MET GLN ARG ILE SEQRES 29 A 477 ASP THR ARG GLN GLN VAL ASP GLN THR GLN ILE TRP GLU SEQRES 30 A 477 VAL SER ASN THR ASN ASP MET GLU GLY GLY MET ILE HIS SEQRES 31 A 477 PRO PHE HIS ILE HIS GLY CYS GLN PHE GLN LEU ILE ASP SEQRES 32 A 477 ARG ASN GLY HIS ALA VAL ASN PRO ASN GLU HIS GLY TRP SEQRES 33 A 477 LYS ASP THR ILE GLY VAL ASN PRO ASN GLU THR VAL ARG SEQRES 34 A 477 ILE LYS VAL LYS PHE THR LYS LEU GLY ILE PHE MET TYR SEQRES 35 A 477 HIS CYS HIS ILE LEU GLU HIS GLU ASP THR GLY MET MET SEQRES 36 A 477 ALA GLN ILE GLU ILE PHE ASP PRO ASP HIS PRO ILE GLU SEQRES 37 A 477 TYR HIS LEU MET PRO MET ASN HIS LYS SEQRES 1 B 477 SER MET ILE THR LYS TYR LEU TYR ASP GLU ASN ALA TYR SEQRES 2 B 477 ASP TYR HIS ASP GLY GLY TYR ARG PRO LEU LYS LYS ALA SEQRES 3 B 477 PRO GLY GLU GLU HIS PRO LEU ASN VAL PRO ALA PHE LEU SEQRES 4 B 477 LYS PRO ASP ARG ILE GLU GLY ASN GLU ILE TYR TYR THR SEQRES 5 B 477 VAL THR ALA GLN ALA GLY GLU THR LYS ILE LEU PRO GLY SEQRES 6 B 477 LYS PRO THR HIS THR TRP GLY TYR ASN GLY SER ILE LEU SEQRES 7 B 477 GLY PRO ALA ILE GLN PHE GLU THR GLY LYS THR TYR HIS SEQRES 8 B 477 VAL THR LEU LYS ASN GLU LEU ASP GLU VAL THR THR PHE SEQRES 9 B 477 HIS TRP HIS GLY LEU ASN ILE VAL GLY PRO TYR GLU ASP SEQRES 10 B 477 GLY GLY PRO HIS ALA PRO VAL TYR PRO HIS GLY GLU ARG SEQRES 11 B 477 LYS ILE THR PHE THR VAL ASP GLN PRO ALA ALA ASN ILE SEQRES 12 B 477 TRP LEU HIS PRO HIS PRO CYS PRO GLU THR ALA ARG GLN SEQRES 13 B 477 VAL TRP ASN GLY LEU ALA ALA PRO VAL ILE ILE THR ASP SEQRES 14 B 477 GLY HIS GLU GLN SER LEU LYS LEU PRO ARG ARG TRP GLY SEQRES 15 B 477 VAL ASN ASP PHE PRO VAL VAL LEU GLN ASP ARG SER TYR SEQRES 16 B 477 HIS ASP ASN GLN LEU ASP TYR LYS ALA ASP TYR ASP VAL SEQRES 17 B 477 ASP GLY THR LEU GLY ASP TYR ALA LEU VAL ASN GLY THR SEQRES 18 B 477 VAL ASN PRO VAL VAL ASN VAL THR LYS PRO ILE VAL ARG SEQRES 19 B 477 LEU ARG PHE LEU ASN GLY SER ASN ARG ARG GLU TRP ARG SEQRES 20 B 477 LEU HIS PHE ALA ASP TYR HIS PRO PHE THR GLN ILE GLY SEQRES 21 B 477 SER ASP GLY GLY LEU LEU PRO GLU ALA VAL LYS MET ASP SEQRES 22 B 477 ARG ILE MET LEU THR CYS ALA GLU ARG ALA ASP VAL LEU SEQRES 23 B 477 VAL ASN PHE SER ASP TYR GLN PRO GLY GLN GLU VAL ILE SEQRES 24 B 477 LEU GLN THR ASP ASP PHE ASP LEU ILE LYS PHE LYS ILE SEQRES 25 B 477 GLY ASP ILE LYS LYS GLU ASN MET LEU LEU PRO SER PRO SEQRES 26 B 477 LEU ALA GLU ILE PRO ALA LEU SER VAL ASP GLU ASN THR SEQRES 27 B 477 PRO VAL PHE LYS THR VAL MET SER GLY MET ASP ASP GLN SEQRES 28 B 477 VAL ARG LEU ASP GLY LYS LEU PHE ASP MET GLN ARG ILE SEQRES 29 B 477 ASP THR ARG GLN GLN VAL ASP GLN THR GLN ILE TRP GLU SEQRES 30 B 477 VAL SER ASN THR ASN ASP MET GLU GLY GLY MET ILE HIS SEQRES 31 B 477 PRO PHE HIS ILE HIS GLY CYS GLN PHE GLN LEU ILE ASP SEQRES 32 B 477 ARG ASN GLY HIS ALA VAL ASN PRO ASN GLU HIS GLY TRP SEQRES 33 B 477 LYS ASP THR ILE GLY VAL ASN PRO ASN GLU THR VAL ARG SEQRES 34 B 477 ILE LYS VAL LYS PHE THR LYS LEU GLY ILE PHE MET TYR SEQRES 35 B 477 HIS CYS HIS ILE LEU GLU HIS GLU ASP THR GLY MET MET SEQRES 36 B 477 ALA GLN ILE GLU ILE PHE ASP PRO ASP HIS PRO ILE GLU SEQRES 37 B 477 TYR HIS LEU MET PRO MET ASN HIS LYS HET CU A 501 1 HET C2O A 502 3 HET CU A 503 1 HET CL A 504 1 HET CU B 501 1 HET C2O B 502 3 HET CU B 503 1 HET BEN B 504 9 HET CL B 505 1 HETNAM CU COPPER (II) ION HETNAM C2O CU-O-CU LINKAGE HETNAM CL CHLORIDE ION HETNAM BEN BENZAMIDINE FORMUL 3 CU 4(CU 2+) FORMUL 4 C2O 2(CU2 O) FORMUL 6 CL 2(CL 1-) FORMUL 10 BEN C7 H8 N2 FORMUL 12 HOH *609(H2 O) HELIX 1 AA1 ASP A 8 ASP A 16 5 9 HELIX 2 AA2 GLU A 151 ASN A 158 1 8 HELIX 3 AA3 ASP A 168 LEU A 174 1 7 HELIX 4 AA4 ASP A 200 TYR A 205 1 6 HELIX 5 AA5 SER A 289 TYR A 291 5 3 HELIX 6 AA6 MET A 347 VAL A 351 5 5 HELIX 7 AA7 ILE A 445 GLY A 452 1 8 HELIX 8 AA8 ASP B 8 ASP B 16 5 9 HELIX 9 AA9 GLU B 151 GLY B 159 1 9 HELIX 10 AB1 ASP B 168 LEU B 174 1 7 HELIX 11 AB2 ASP B 200 TYR B 205 1 6 HELIX 12 AB3 MET B 347 VAL B 351 5 5 HELIX 13 AB4 ILE B 445 GLY B 452 1 8 SHEET 1 AA1 6 HIS A 30 PRO A 31 0 SHEET 2 AA1 6 PRO A 223 VAL A 227 1 O VAL A 224 N HIS A 30 SHEET 3 AA1 6 PHE A 304 ILE A 311 1 O LYS A 310 N VAL A 225 SHEET 4 AA1 6 GLU A 296 THR A 301 -1 N VAL A 297 O PHE A 309 SHEET 5 AA1 6 TRP A 245 PHE A 249 -1 N HIS A 248 O GLN A 300 SHEET 6 AA1 6 ILE A 274 LEU A 276 -1 O ILE A 274 N LEU A 247 SHEET 1 AA2 3 ARG A 42 GLU A 44 0 SHEET 2 AA2 3 GLU A 47 THR A 59 -1 O GLU A 47 N GLU A 44 SHEET 3 AA2 3 THR A 67 TYR A 72 -1 O THR A 67 N THR A 59 SHEET 1 AA3 4 ARG A 42 GLU A 44 0 SHEET 2 AA3 4 GLU A 47 THR A 59 -1 O GLU A 47 N GLU A 44 SHEET 3 AA3 4 THR A 88 ASN A 95 1 O LYS A 94 N ALA A 54 SHEET 4 AA3 4 GLU A 128 THR A 134 -1 O PHE A 133 N TYR A 89 SHEET 1 AA4 4 ILE A 81 GLU A 84 0 SHEET 2 AA4 4 ALA A 162 THR A 167 1 O ILE A 165 N PHE A 83 SHEET 3 AA4 4 ALA A 140 HIS A 145 -1 N ILE A 142 O VAL A 164 SHEET 4 AA4 4 HIS A 104 HIS A 106 -1 N HIS A 104 O HIS A 145 SHEET 1 AA5 6 TYR A 214 VAL A 217 0 SHEET 2 AA5 6 ASP A 184 ARG A 192 -1 N ARG A 192 O TYR A 214 SHEET 3 AA5 6 ILE A 231 ASN A 238 1 O LEU A 237 N LEU A 189 SHEET 4 AA5 6 ARG A 281 ASN A 287 -1 O VAL A 284 N LEU A 234 SHEET 5 AA5 6 PHE A 255 SER A 260 -1 N ILE A 258 O ASP A 283 SHEET 6 AA5 6 GLY A 263 MET A 271 -1 O MET A 271 N PHE A 255 SHEET 1 AA6 5 ARG A 352 LEU A 353 0 SHEET 2 AA6 5 PHE A 340 SER A 345 -1 N SER A 345 O ARG A 352 SHEET 3 AA6 5 THR A 372 ASN A 379 1 O GLU A 376 N PHE A 340 SHEET 4 AA6 5 THR A 426 LYS A 432 -1 O VAL A 427 N VAL A 377 SHEET 5 AA6 5 GLN A 399 ARG A 403 -1 N ILE A 401 O ARG A 428 SHEET 1 AA7 5 THR A 365 GLN A 368 0 SHEET 2 AA7 5 MET A 454 PHE A 460 1 O GLU A 458 N GLN A 367 SHEET 3 AA7 5 GLY A 437 CYS A 443 -1 N GLY A 437 O ILE A 459 SHEET 4 AA7 5 HIS A 389 ILE A 393 -1 N HIS A 392 O HIS A 442 SHEET 5 AA7 5 THR A 418 VAL A 421 -1 O ILE A 419 N PHE A 391 SHEET 1 AA8 6 HIS B 30 PRO B 31 0 SHEET 2 AA8 6 PRO B 223 VAL B 227 1 O VAL B 224 N HIS B 30 SHEET 3 AA8 6 PHE B 304 ILE B 311 1 O LYS B 308 N VAL B 225 SHEET 4 AA8 6 GLU B 296 THR B 301 -1 N LEU B 299 O ILE B 307 SHEET 5 AA8 6 TRP B 245 PHE B 249 -1 N HIS B 248 O GLN B 300 SHEET 6 AA8 6 ILE B 274 LEU B 276 -1 O ILE B 274 N LEU B 247 SHEET 1 AA9 3 ARG B 42 GLU B 44 0 SHEET 2 AA9 3 GLU B 47 THR B 59 -1 O GLU B 47 N GLU B 44 SHEET 3 AA9 3 THR B 67 TYR B 72 -1 O THR B 67 N THR B 59 SHEET 1 AB1 4 ARG B 42 GLU B 44 0 SHEET 2 AB1 4 GLU B 47 THR B 59 -1 O GLU B 47 N GLU B 44 SHEET 3 AB1 4 THR B 88 ASN B 95 1 O HIS B 90 N ILE B 48 SHEET 4 AB1 4 GLU B 128 THR B 134 -1 O PHE B 133 N TYR B 89 SHEET 1 AB2 4 ILE B 81 GLU B 84 0 SHEET 2 AB2 4 ALA B 162 THR B 167 1 O ILE B 165 N PHE B 83 SHEET 3 AB2 4 ALA B 140 HIS B 145 -1 N ILE B 142 O VAL B 164 SHEET 4 AB2 4 HIS B 104 HIS B 106 -1 N HIS B 104 O HIS B 145 SHEET 1 AB3 6 TYR B 214 VAL B 217 0 SHEET 2 AB3 6 ASP B 184 ARG B 192 -1 N ARG B 192 O TYR B 214 SHEET 3 AB3 6 ILE B 231 ASN B 238 1 O LEU B 237 N LEU B 189 SHEET 4 AB3 6 ARG B 281 ASN B 287 -1 O VAL B 284 N LEU B 234 SHEET 5 AB3 6 PHE B 255 SER B 260 -1 N THR B 256 O LEU B 285 SHEET 6 AB3 6 GLY B 263 MET B 271 -1 O MET B 271 N PHE B 255 SHEET 1 AB4 6 ARG B 352 LEU B 353 0 SHEET 2 AB4 6 PHE B 340 SER B 345 -1 N SER B 345 O ARG B 352 SHEET 3 AB4 6 GLN B 373 ASN B 379 1 O SER B 378 N MET B 344 SHEET 4 AB4 6 THR B 426 VAL B 431 -1 O VAL B 427 N VAL B 377 SHEET 5 AB4 6 PHE B 398 ARG B 403 -1 N ILE B 401 O ARG B 428 SHEET 6 AB4 6 TRP B 415 LYS B 416 -1 O LYS B 416 N PHE B 398 SHEET 1 AB5 5 THR B 365 GLN B 368 0 SHEET 2 AB5 5 MET B 454 PHE B 460 1 O GLU B 458 N THR B 365 SHEET 3 AB5 5 GLY B 437 CYS B 443 -1 N GLY B 437 O ILE B 459 SHEET 4 AB5 5 HIS B 389 ILE B 393 -1 N HIS B 392 O HIS B 442 SHEET 5 AB5 5 THR B 418 VAL B 421 -1 O ILE B 419 N PHE B 391 LINK NE2 HIS A 104 CU CU A 503 1555 1555 2.21 LINK ND1 HIS A 106 CU2 C2O A 502 1555 1555 1.99 LINK NE2 HIS A 145 CU2 C2O A 502 1555 1555 2.12 LINK NE2 HIS A 147 CU3 C2O A 502 1555 1555 2.38 LINK ND1 HIS A 389 CU CU A 501 1555 1555 2.05 LINK NE2 HIS A 392 CU CU A 503 1555 1555 2.27 LINK NE2 HIS A 394 CU3 C2O A 502 1555 1555 2.14 LINK NE2 HIS A 442 CU3 C2O A 502 1555 1555 2.20 LINK SG CYS A 443 CU CU A 501 1555 1555 2.20 LINK NE2 HIS A 444 CU2 C2O A 502 1555 1555 2.29 LINK ND1 HIS A 448 CU CU A 501 1555 1555 2.03 LINK NE2 HIS B 104 CU CU B 503 1555 1555 2.24 LINK ND1 HIS B 106 CU2 C2O B 502 1555 1555 1.99 LINK NE2 HIS B 145 CU2 C2O B 502 1555 1555 2.24 LINK NE2 HIS B 147 CU3 C2O B 502 1555 1555 2.40 LINK ND1 HIS B 389 CU CU B 501 1555 1555 2.13 LINK NE2 HIS B 392 CU CU B 503 1555 1555 2.26 LINK NE2 HIS B 394 CU3 C2O B 502 1555 1555 2.12 LINK NE2 HIS B 442 CU3 C2O B 502 1555 1555 2.14 LINK SG CYS B 443 CU CU B 501 1555 1555 2.16 LINK NE2 HIS B 444 CU2 C2O B 502 1555 1555 2.26 LINK ND1 HIS B 448 CU CU B 501 1555 1555 2.10 CISPEP 1 GLY A 112 PRO A 113 0 8.17 CISPEP 2 CYS A 149 PRO A 150 0 -5.38 CISPEP 3 SER A 323 PRO A 324 0 6.44 CISPEP 4 GLY B 112 PRO B 113 0 -1.94 CISPEP 5 CYS B 149 PRO B 150 0 -12.44 CISPEP 6 SER B 323 PRO B 324 0 -7.37 SITE 1 AC1 4 HIS A 389 CYS A 443 HIS A 448 MET A 453 SITE 1 AC2 10 HIS A 104 HIS A 106 HIS A 145 HIS A 147 SITE 2 AC2 10 HIS A 392 HIS A 394 HIS A 442 HIS A 444 SITE 3 AC2 10 CU A 503 HOH A 610 SITE 1 AC3 6 HIS A 104 HIS A 106 HIS A 392 HIS A 394 SITE 2 AC3 6 C2O A 502 HOH A 788 SITE 1 AC4 4 HIS B 389 CYS B 443 HIS B 448 MET B 453 SITE 1 AC5 10 HIS B 104 HIS B 106 HIS B 145 HIS B 147 SITE 2 AC5 10 HIS B 392 HIS B 394 HIS B 442 HIS B 444 SITE 3 AC5 10 CU B 503 HOH B 609 SITE 1 AC6 6 HIS B 104 HIS B 106 HIS B 392 HIS B 394 SITE 2 AC6 6 C2O B 502 HOH B 783 SITE 1 AC7 7 TYR A 14 HOH A 715 HOH A 757 TYR B 14 SITE 2 AC7 7 ASP B 303 HOH B 693 HOH B 704 SITE 1 AC8 1 PRO B 223 CRYST1 56.060 147.300 65.460 90.00 98.55 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017838 0.000000 0.002682 0.00000 SCALE2 0.000000 0.006789 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015448 0.00000