data_6XJ8 # _entry.id 6XJ8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6XJ8 pdb_00006xj8 10.2210/pdb6xj8/pdb WWPDB D_1000250230 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6XJ8 _pdbx_database_status.recvd_initial_deposition_date 2020-06-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pemberton, O.A.' 1 0000-0003-1740-6085 'Chen, Y.' 2 0000-0002-5115-3600 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Biol.Chem. _citation.journal_id_ASTM JBCHA3 _citation.journal_id_CSD 0071 _citation.journal_id_ISSN 1083-351X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 296 _citation.language ? _citation.page_first 100155 _citation.page_last 100155 _citation.title 'KPC-2 beta-lactamase enables carbapenem antibiotic resistance through fast deacylation of the covalent intermediate.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1074/jbc.RA120.015050 _citation.pdbx_database_id_PubMed 33273017 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mehta, S.C.' 1 ? primary 'Furey, I.M.' 2 ? primary 'Pemberton, O.A.' 3 ? primary 'Boragine, D.M.' 4 ? primary 'Chen, Y.' 5 ? primary 'Palzkill, T.' 6 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6XJ8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 56.599 _cell.length_a_esd ? _cell.length_b 59.360 _cell.length_b_esd ? _cell.length_c 77.620 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XJ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Carbapenem-hydrolyzing beta-lactamase KPC' 31101.223 1 3.5.2.6 N170A ? ? 2 non-polymer syn ;(2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid ; 317.361 1 ? ? ? ? 3 water nat water 18.015 150 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Carbapenem-hydrolyzing beta-lactamase KPC-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVL ARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFR LDRWELELASAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVY GTANDYAVVWPTGRAPIVLAVYTRAPNKDDKHSEAVIAAAARLALEGLGVNGQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVL ARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFR LDRWELELASAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVY GTANDYAVVWPTGRAPIVLAVYTRAPNKDDKHSEAVIAAAARLALEGLGVNGQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LEU n 1 4 TYR n 1 5 ARG n 1 6 ARG n 1 7 LEU n 1 8 VAL n 1 9 LEU n 1 10 LEU n 1 11 SER n 1 12 CYS n 1 13 LEU n 1 14 SER n 1 15 TRP n 1 16 PRO n 1 17 LEU n 1 18 ALA n 1 19 GLY n 1 20 PHE n 1 21 SER n 1 22 ALA n 1 23 THR n 1 24 ALA n 1 25 LEU n 1 26 THR n 1 27 ASN n 1 28 LEU n 1 29 VAL n 1 30 ALA n 1 31 GLU n 1 32 PRO n 1 33 PHE n 1 34 ALA n 1 35 LYS n 1 36 LEU n 1 37 GLU n 1 38 GLN n 1 39 ASP n 1 40 PHE n 1 41 GLY n 1 42 GLY n 1 43 SER n 1 44 ILE n 1 45 GLY n 1 46 VAL n 1 47 TYR n 1 48 ALA n 1 49 MET n 1 50 ASP n 1 51 THR n 1 52 GLY n 1 53 SER n 1 54 GLY n 1 55 ALA n 1 56 THR n 1 57 VAL n 1 58 SER n 1 59 TYR n 1 60 ARG n 1 61 ALA n 1 62 GLU n 1 63 GLU n 1 64 ARG n 1 65 PHE n 1 66 PRO n 1 67 LEU n 1 68 CYS n 1 69 SER n 1 70 SER n 1 71 PHE n 1 72 LYS n 1 73 GLY n 1 74 PHE n 1 75 LEU n 1 76 ALA n 1 77 ALA n 1 78 ALA n 1 79 VAL n 1 80 LEU n 1 81 ALA n 1 82 ARG n 1 83 SER n 1 84 GLN n 1 85 GLN n 1 86 GLN n 1 87 ALA n 1 88 GLY n 1 89 LEU n 1 90 LEU n 1 91 ASP n 1 92 THR n 1 93 PRO n 1 94 ILE n 1 95 ARG n 1 96 TYR n 1 97 GLY n 1 98 LYS n 1 99 ASN n 1 100 ALA n 1 101 LEU n 1 102 VAL n 1 103 PRO n 1 104 TRP n 1 105 SER n 1 106 PRO n 1 107 ILE n 1 108 SER n 1 109 GLU n 1 110 LYS n 1 111 TYR n 1 112 LEU n 1 113 THR n 1 114 THR n 1 115 GLY n 1 116 MET n 1 117 THR n 1 118 VAL n 1 119 ALA n 1 120 GLU n 1 121 LEU n 1 122 SER n 1 123 ALA n 1 124 ALA n 1 125 ALA n 1 126 VAL n 1 127 GLN n 1 128 TYR n 1 129 SER n 1 130 ASP n 1 131 ASN n 1 132 ALA n 1 133 ALA n 1 134 ALA n 1 135 ASN n 1 136 LEU n 1 137 LEU n 1 138 LEU n 1 139 LYS n 1 140 GLU n 1 141 LEU n 1 142 GLY n 1 143 GLY n 1 144 PRO n 1 145 ALA n 1 146 GLY n 1 147 LEU n 1 148 THR n 1 149 ALA n 1 150 PHE n 1 151 MET n 1 152 ARG n 1 153 SER n 1 154 ILE n 1 155 GLY n 1 156 ASP n 1 157 THR n 1 158 THR n 1 159 PHE n 1 160 ARG n 1 161 LEU n 1 162 ASP n 1 163 ARG n 1 164 TRP n 1 165 GLU n 1 166 LEU n 1 167 GLU n 1 168 LEU n 1 169 ALA n 1 170 SER n 1 171 ALA n 1 172 ILE n 1 173 PRO n 1 174 GLY n 1 175 ASP n 1 176 ALA n 1 177 ARG n 1 178 ASP n 1 179 THR n 1 180 SER n 1 181 SER n 1 182 PRO n 1 183 ARG n 1 184 ALA n 1 185 VAL n 1 186 THR n 1 187 GLU n 1 188 SER n 1 189 LEU n 1 190 GLN n 1 191 LYS n 1 192 LEU n 1 193 THR n 1 194 LEU n 1 195 GLY n 1 196 SER n 1 197 ALA n 1 198 LEU n 1 199 ALA n 1 200 ALA n 1 201 PRO n 1 202 GLN n 1 203 ARG n 1 204 GLN n 1 205 GLN n 1 206 PHE n 1 207 VAL n 1 208 ASP n 1 209 TRP n 1 210 LEU n 1 211 LYS n 1 212 GLY n 1 213 ASN n 1 214 THR n 1 215 THR n 1 216 GLY n 1 217 ASN n 1 218 HIS n 1 219 ARG n 1 220 ILE n 1 221 ARG n 1 222 ALA n 1 223 ALA n 1 224 VAL n 1 225 PRO n 1 226 ALA n 1 227 ASP n 1 228 TRP n 1 229 ALA n 1 230 VAL n 1 231 GLY n 1 232 ASP n 1 233 LYS n 1 234 THR n 1 235 GLY n 1 236 THR n 1 237 CYS n 1 238 GLY n 1 239 VAL n 1 240 TYR n 1 241 GLY n 1 242 THR n 1 243 ALA n 1 244 ASN n 1 245 ASP n 1 246 TYR n 1 247 ALA n 1 248 VAL n 1 249 VAL n 1 250 TRP n 1 251 PRO n 1 252 THR n 1 253 GLY n 1 254 ARG n 1 255 ALA n 1 256 PRO n 1 257 ILE n 1 258 VAL n 1 259 LEU n 1 260 ALA n 1 261 VAL n 1 262 TYR n 1 263 THR n 1 264 ARG n 1 265 ALA n 1 266 PRO n 1 267 ASN n 1 268 LYS n 1 269 ASP n 1 270 ASP n 1 271 LYS n 1 272 HIS n 1 273 SER n 1 274 GLU n 1 275 ALA n 1 276 VAL n 1 277 ILE n 1 278 ALA n 1 279 ALA n 1 280 ALA n 1 281 ALA n 1 282 ARG n 1 283 LEU n 1 284 ALA n 1 285 LEU n 1 286 GLU n 1 287 GLY n 1 288 LEU n 1 289 GLY n 1 290 VAL n 1 291 ASN n 1 292 GLY n 1 293 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 293 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'bla, kpc, kpc1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Klebsiella pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 573 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BLKPC_KLEPN _struct_ref.pdbx_db_accession Q9F663 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSLYRRLVLLSCLSWPLAGFSATALTNLVAEPFAKLEQDFGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVL ARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFR LDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGSALAAPQRQQFVDWLKGNTTGNHRIRAAVPADWAVGDKTGTCGVY GTANDYAVVWPTGRAPIVLAVYTRAPNKDDKHSEAVIAAAARLALEGLGVNGQ ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6XJ8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 293 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9F663 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 293 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 295 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 6XJ8 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 169 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9F663 _struct_ref_seq_dif.db_mon_id ASN _struct_ref_seq_dif.pdbx_seq_db_seq_num 169 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 170 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8YF non-polymer . ;(2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid ; 'Imipenem, hydrolyzed form' 'C12 H19 N3 O5 S' 317.361 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6XJ8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.32 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.0 M Ammonium sulfate, 5% (v/v) Ethanol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-03-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.00 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6XJ8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.050 _reflns.d_resolution_low 36.230 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16583 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.400 _reflns.pdbx_Rmerge_I_obs 0.231 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.100 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.961 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 2.050 2.110 ? ? 8735 ? ? ? 1272 99.300 ? ? ? ? 0.561 ? ? ? ? ? ? ? ? 6.900 ? ? ? 3.100 ? ? ? 1 1 0.662 ? ? 8.940 36.230 ? ? 1318 ? ? ? 245 98.400 ? ? ? ? 0.211 ? ? ? ? ? ? ? ? 5.400 ? ? ? 7.300 ? ? ? 2 1 0.965 ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 77.040 _refine.B_iso_mean 25.3511 _refine.B_iso_min 9.220 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6XJ8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0500 _refine.ls_d_res_low 36.2300 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16583 _refine.ls_number_reflns_R_free 1494 _refine.ls_number_reflns_R_work 29312 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.2400 _refine.ls_percent_reflns_R_free 4.8500 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1878 _refine.ls_R_factor_R_free 0.2384 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1853 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5UL8 _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.7200 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0500 _refine_hist.d_res_low 36.2300 _refine_hist.number_atoms_solvent 150 _refine_hist.number_atoms_total 2146 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 265 _refine_hist.pdbx_B_iso_mean_ligand 35.94 _refine_hist.pdbx_B_iso_mean_solvent 32.05 _refine_hist.pdbx_number_atoms_protein 1975 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0500 2.1200 2830 . 171 2659 99.0000 . . . 0.2599 0.0000 0.2211 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.1200 2.1900 2867 . 152 2715 100.0000 . . . 0.3069 0.0000 0.2059 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.1900 2.2800 2888 . 143 2745 99.0000 . . . 0.2686 0.0000 0.1989 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.2800 2.3800 2791 . 101 2690 98.0000 . . . 0.2216 0.0000 0.2071 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.3800 2.5100 2829 . 143 2686 97.0000 . . . 0.2626 0.0000 0.2052 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.5100 2.6700 2741 . 113 2628 95.0000 . . . 0.2836 0.0000 0.1964 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.6700 2.8700 2534 . 125 2409 88.0000 . . . 0.2917 0.0000 0.1956 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 2.8700 3.1600 2872 . 109 2763 99.0000 . . . 0.2300 0.0000 0.1900 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 3.1600 3.6200 2835 . 144 2691 99.0000 . . . 0.2539 0.0000 0.1688 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 3.6200 4.5600 2864 . 177 2687 99.0000 . . . 0.1949 0.0000 0.1549 . . . . . . . 11 . . . 'X-RAY DIFFRACTION' 4.5600 36.2300 2755 . 116 2639 95.0000 . . . 0.2044 0.0000 0.1873 . . . . . . . 11 . . . # _struct.entry_id 6XJ8 _struct.title 'KPC-2 N170A mutant bound to hydrolyzed imipenem at 2.05 A' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6XJ8 _struct_keywords.text 'carbapenemase, beta-lactamase, hydrolase, antibiotic complex' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 29 ? GLY A 41 ? VAL A 29 GLY A 41 1 ? 13 HELX_P HELX_P2 AA2 SER A 70 ? SER A 83 ? SER A 71 SER A 84 1 ? 14 HELX_P HELX_P3 AA3 GLY A 97 ? LEU A 101 ? GLY A 98 LEU A 102 5 ? 5 HELX_P HELX_P4 AA4 ILE A 107 ? LEU A 112 ? ILE A 108 LEU A 113 5 ? 6 HELX_P HELX_P5 AA5 VAL A 118 ? TYR A 128 ? VAL A 119 TYR A 129 1 ? 11 HELX_P HELX_P6 AA6 ASP A 130 ? LEU A 141 ? ASP A 131 LEU A 142 1 ? 12 HELX_P HELX_P7 AA7 GLY A 142 ? ILE A 154 ? GLY A 143 ILE A 155 1 ? 13 HELX_P HELX_P8 AA8 LEU A 166 ? SER A 170 ? LEU A 167 SER A 171 5 ? 5 HELX_P HELX_P9 AA9 SER A 181 ? LEU A 194 ? SER A 182 LEU A 195 1 ? 14 HELX_P HELX_P10 AB1 ALA A 199 ? GLY A 212 ? ALA A 200 GLY A 213 1 ? 14 HELX_P HELX_P11 AB2 ARG A 219 ? VAL A 224 ? ARG A 220 VAL A 225 5 ? 6 HELX_P HELX_P12 AB3 GLY A 238 ? GLY A 241 ? GLY A 239 GLY A 242 5 ? 4 HELX_P HELX_P13 AB4 SER A 273 ? GLY A 289 ? SER A 275 GLY A 291 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 68 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 237 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 69 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 238 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.056 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 165 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 166 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 LEU _struct_mon_prot_cis.pdbx_label_seq_id_2 166 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 LEU _struct_mon_prot_cis.pdbx_auth_seq_id_2 167 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.46 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 56 ? TYR A 59 ? THR A 56 TYR A 60 AA1 2 SER A 43 ? ASP A 50 ? SER A 43 ASP A 50 AA1 3 ILE A 257 ? ARG A 264 ? ILE A 259 ARG A 266 AA1 4 ALA A 243 ? TRP A 250 ? ALA A 244 TRP A 251 AA1 5 ALA A 229 ? THR A 236 ? ALA A 230 THR A 237 AA2 1 PHE A 65 ? PRO A 66 ? PHE A 66 PRO A 67 AA2 2 THR A 179 ? SER A 180 ? THR A 180 SER A 181 AA3 1 PRO A 93 ? ILE A 94 ? PRO A 94 ILE A 95 AA3 2 MET A 116 ? THR A 117 ? MET A 117 THR A 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O TYR A 59 ? O TYR A 60 N VAL A 46 ? N VAL A 46 AA1 2 3 N SER A 43 ? N SER A 43 O ARG A 264 ? O ARG A 266 AA1 3 4 O ILE A 257 ? O ILE A 259 N VAL A 249 ? N VAL A 250 AA1 4 5 O TRP A 250 ? O TRP A 251 N ALA A 229 ? N ALA A 230 AA2 1 2 N PHE A 65 ? N PHE A 66 O SER A 180 ? O SER A 181 AA3 1 2 N ILE A 94 ? N ILE A 95 O MET A 116 ? O MET A 117 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 8YF _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'binding site for residue 8YF A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 SER A 69 ? SER A 70 . ? 1_555 ? 2 AC1 9 TRP A 104 ? TRP A 105 . ? 1_555 ? 3 AC1 9 SER A 129 ? SER A 130 . ? 1_555 ? 4 AC1 9 ASN A 131 ? ASN A 132 . ? 1_555 ? 5 AC1 9 LEU A 166 ? LEU A 167 . ? 1_555 ? 6 AC1 9 LYS A 233 ? LYS A 234 . ? 1_555 ? 7 AC1 9 THR A 234 ? THR A 235 . ? 1_555 ? 8 AC1 9 THR A 236 ? THR A 237 . ? 1_555 ? 9 AC1 9 HOH C . ? HOH A 499 . ? 1_555 ? # _atom_sites.entry_id 6XJ8 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.017668 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016846 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012883 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 TYR 4 4 ? ? ? A . n A 1 5 ARG 5 5 ? ? ? A . n A 1 6 ARG 6 6 ? ? ? A . n A 1 7 LEU 7 7 ? ? ? A . n A 1 8 VAL 8 8 ? ? ? A . n A 1 9 LEU 9 9 ? ? ? A . n A 1 10 LEU 10 10 ? ? ? A . n A 1 11 SER 11 11 ? ? ? A . n A 1 12 CYS 12 12 ? ? ? A . n A 1 13 LEU 13 13 ? ? ? A . n A 1 14 SER 14 14 ? ? ? A . n A 1 15 TRP 15 15 ? ? ? A . n A 1 16 PRO 16 16 ? ? ? A . n A 1 17 LEU 17 17 ? ? ? A . n A 1 18 ALA 18 18 ? ? ? A . n A 1 19 GLY 19 19 ? ? ? A . n A 1 20 PHE 20 20 ? ? ? A . n A 1 21 SER 21 21 ? ? ? A . n A 1 22 ALA 22 22 ? ? ? A . n A 1 23 THR 23 23 ? ? ? A . n A 1 24 ALA 24 24 ? ? ? A . n A 1 25 LEU 25 25 ? ? ? A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 SER 58 59 59 SER SER A . n A 1 59 TYR 59 60 60 TYR TYR A . n A 1 60 ARG 60 61 61 ARG ARG A . n A 1 61 ALA 61 62 62 ALA ALA A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 GLU 63 64 64 GLU GLU A . n A 1 64 ARG 64 65 65 ARG ARG A . n A 1 65 PHE 65 66 66 PHE PHE A . n A 1 66 PRO 66 67 67 PRO PRO A . n A 1 67 LEU 67 68 68 LEU LEU A . n A 1 68 CYS 68 69 69 CYS CYS A . n A 1 69 SER 69 70 70 SER SER A . n A 1 70 SER 70 71 71 SER SER A . n A 1 71 PHE 71 72 72 PHE PHE A . n A 1 72 LYS 72 73 73 LYS LYS A . n A 1 73 GLY 73 74 74 GLY GLY A . n A 1 74 PHE 74 75 75 PHE PHE A . n A 1 75 LEU 75 76 76 LEU LEU A . n A 1 76 ALA 76 77 77 ALA ALA A . n A 1 77 ALA 77 78 78 ALA ALA A . n A 1 78 ALA 78 79 79 ALA ALA A . n A 1 79 VAL 79 80 80 VAL VAL A . n A 1 80 LEU 80 81 81 LEU LEU A . n A 1 81 ALA 81 82 82 ALA ALA A . n A 1 82 ARG 82 83 83 ARG ARG A . n A 1 83 SER 83 84 84 SER SER A . n A 1 84 GLN 84 85 85 GLN GLN A . n A 1 85 GLN 85 86 86 GLN GLN A . n A 1 86 GLN 86 87 87 GLN GLN A . n A 1 87 ALA 87 88 88 ALA ALA A . n A 1 88 GLY 88 89 89 GLY GLY A . n A 1 89 LEU 89 90 90 LEU LEU A . n A 1 90 LEU 90 91 91 LEU LEU A . n A 1 91 ASP 91 92 92 ASP ASP A . n A 1 92 THR 92 93 93 THR THR A . n A 1 93 PRO 93 94 94 PRO PRO A . n A 1 94 ILE 94 95 95 ILE ILE A . n A 1 95 ARG 95 96 96 ARG ARG A . n A 1 96 TYR 96 97 97 TYR TYR A . n A 1 97 GLY 97 98 98 GLY GLY A . n A 1 98 LYS 98 99 99 LYS LYS A . n A 1 99 ASN 99 100 100 ASN ASN A . n A 1 100 ALA 100 101 101 ALA ALA A . n A 1 101 LEU 101 102 102 LEU LEU A . n A 1 102 VAL 102 103 103 VAL VAL A . n A 1 103 PRO 103 104 104 PRO PRO A . n A 1 104 TRP 104 105 105 TRP TRP A . n A 1 105 SER 105 106 106 SER SER A . n A 1 106 PRO 106 107 107 PRO PRO A . n A 1 107 ILE 107 108 108 ILE ILE A . n A 1 108 SER 108 109 109 SER SER A . n A 1 109 GLU 109 110 110 GLU GLU A . n A 1 110 LYS 110 111 111 LYS LYS A . n A 1 111 TYR 111 112 112 TYR TYR A . n A 1 112 LEU 112 113 113 LEU LEU A . n A 1 113 THR 113 114 114 THR THR A . n A 1 114 THR 114 115 115 THR THR A . n A 1 115 GLY 115 116 116 GLY GLY A . n A 1 116 MET 116 117 117 MET MET A . n A 1 117 THR 117 118 118 THR THR A . n A 1 118 VAL 118 119 119 VAL VAL A . n A 1 119 ALA 119 120 120 ALA ALA A . n A 1 120 GLU 120 121 121 GLU GLU A . n A 1 121 LEU 121 122 122 LEU LEU A . n A 1 122 SER 122 123 123 SER SER A . n A 1 123 ALA 123 124 124 ALA ALA A . n A 1 124 ALA 124 125 125 ALA ALA A . n A 1 125 ALA 125 126 126 ALA ALA A . n A 1 126 VAL 126 127 127 VAL VAL A . n A 1 127 GLN 127 128 128 GLN GLN A . n A 1 128 TYR 128 129 129 TYR TYR A . n A 1 129 SER 129 130 130 SER SER A . n A 1 130 ASP 130 131 131 ASP ASP A . n A 1 131 ASN 131 132 132 ASN ASN A . n A 1 132 ALA 132 133 133 ALA ALA A . n A 1 133 ALA 133 134 134 ALA ALA A . n A 1 134 ALA 134 135 135 ALA ALA A . n A 1 135 ASN 135 136 136 ASN ASN A . n A 1 136 LEU 136 137 137 LEU LEU A . n A 1 137 LEU 137 138 138 LEU LEU A . n A 1 138 LEU 138 139 139 LEU LEU A . n A 1 139 LYS 139 140 140 LYS LYS A . n A 1 140 GLU 140 141 141 GLU GLU A . n A 1 141 LEU 141 142 142 LEU LEU A . n A 1 142 GLY 142 143 143 GLY GLY A . n A 1 143 GLY 143 144 144 GLY GLY A . n A 1 144 PRO 144 145 145 PRO PRO A . n A 1 145 ALA 145 146 146 ALA ALA A . n A 1 146 GLY 146 147 147 GLY GLY A . n A 1 147 LEU 147 148 148 LEU LEU A . n A 1 148 THR 148 149 149 THR THR A . n A 1 149 ALA 149 150 150 ALA ALA A . n A 1 150 PHE 150 151 151 PHE PHE A . n A 1 151 MET 151 152 152 MET MET A . n A 1 152 ARG 152 153 153 ARG ARG A . n A 1 153 SER 153 154 154 SER SER A . n A 1 154 ILE 154 155 155 ILE ILE A . n A 1 155 GLY 155 156 156 GLY GLY A . n A 1 156 ASP 156 157 157 ASP ASP A . n A 1 157 THR 157 158 158 THR THR A . n A 1 158 THR 158 159 159 THR THR A . n A 1 159 PHE 159 160 160 PHE PHE A . n A 1 160 ARG 160 161 161 ARG ARG A . n A 1 161 LEU 161 162 162 LEU LEU A . n A 1 162 ASP 162 163 163 ASP ASP A . n A 1 163 ARG 163 164 164 ARG ARG A . n A 1 164 TRP 164 165 165 TRP TRP A . n A 1 165 GLU 165 166 166 GLU GLU A . n A 1 166 LEU 166 167 167 LEU LEU A . n A 1 167 GLU 167 168 168 GLU GLU A . n A 1 168 LEU 168 169 169 LEU LEU A . n A 1 169 ALA 169 170 170 ALA ALA A . n A 1 170 SER 170 171 171 SER SER A . n A 1 171 ALA 171 172 172 ALA ALA A . n A 1 172 ILE 172 173 173 ILE ILE A . n A 1 173 PRO 173 174 174 PRO PRO A . n A 1 174 GLY 174 175 175 GLY GLY A . n A 1 175 ASP 175 176 176 ASP ASP A . n A 1 176 ALA 176 177 177 ALA ALA A . n A 1 177 ARG 177 178 178 ARG ARG A . n A 1 178 ASP 178 179 179 ASP ASP A . n A 1 179 THR 179 180 180 THR THR A . n A 1 180 SER 180 181 181 SER SER A . n A 1 181 SER 181 182 182 SER SER A . n A 1 182 PRO 182 183 183 PRO PRO A . n A 1 183 ARG 183 184 184 ARG ARG A . n A 1 184 ALA 184 185 185 ALA ALA A . n A 1 185 VAL 185 186 186 VAL VAL A . n A 1 186 THR 186 187 187 THR THR A . n A 1 187 GLU 187 188 188 GLU GLU A . n A 1 188 SER 188 189 189 SER SER A . n A 1 189 LEU 189 190 190 LEU LEU A . n A 1 190 GLN 190 191 191 GLN GLN A . n A 1 191 LYS 191 192 192 LYS LYS A . n A 1 192 LEU 192 193 193 LEU LEU A . n A 1 193 THR 193 194 194 THR THR A . n A 1 194 LEU 194 195 195 LEU LEU A . n A 1 195 GLY 195 196 196 GLY GLY A . n A 1 196 SER 196 197 197 SER SER A . n A 1 197 ALA 197 198 198 ALA ALA A . n A 1 198 LEU 198 199 199 LEU LEU A . n A 1 199 ALA 199 200 200 ALA ALA A . n A 1 200 ALA 200 201 201 ALA ALA A . n A 1 201 PRO 201 202 202 PRO PRO A . n A 1 202 GLN 202 203 203 GLN GLN A . n A 1 203 ARG 203 204 204 ARG ARG A . n A 1 204 GLN 204 205 205 GLN GLN A . n A 1 205 GLN 205 206 206 GLN GLN A . n A 1 206 PHE 206 207 207 PHE PHE A . n A 1 207 VAL 207 208 208 VAL VAL A . n A 1 208 ASP 208 209 209 ASP ASP A . n A 1 209 TRP 209 210 210 TRP TRP A . n A 1 210 LEU 210 211 211 LEU LEU A . n A 1 211 LYS 211 212 212 LYS LYS A . n A 1 212 GLY 212 213 213 GLY GLY A . n A 1 213 ASN 213 214 214 ASN ASN A . n A 1 214 THR 214 215 215 THR THR A . n A 1 215 THR 215 216 216 THR THR A . n A 1 216 GLY 216 217 217 GLY GLY A . n A 1 217 ASN 217 218 218 ASN ASN A . n A 1 218 HIS 218 219 219 HIS HIS A . n A 1 219 ARG 219 220 220 ARG ARG A . n A 1 220 ILE 220 221 221 ILE ILE A . n A 1 221 ARG 221 222 222 ARG ARG A . n A 1 222 ALA 222 223 223 ALA ALA A . n A 1 223 ALA 223 224 224 ALA ALA A . n A 1 224 VAL 224 225 225 VAL VAL A . n A 1 225 PRO 225 226 226 PRO PRO A . n A 1 226 ALA 226 227 227 ALA ALA A . n A 1 227 ASP 227 228 228 ASP ASP A . n A 1 228 TRP 228 229 229 TRP TRP A . n A 1 229 ALA 229 230 230 ALA ALA A . n A 1 230 VAL 230 231 231 VAL VAL A . n A 1 231 GLY 231 232 232 GLY GLY A . n A 1 232 ASP 232 233 233 ASP ASP A . n A 1 233 LYS 233 234 234 LYS LYS A . n A 1 234 THR 234 235 235 THR THR A . n A 1 235 GLY 235 236 236 GLY GLY A . n A 1 236 THR 236 237 237 THR THR A . n A 1 237 CYS 237 238 238 CYS CYS A . n A 1 238 GLY 238 239 239 GLY GLY A . n A 1 239 VAL 239 240 240 VAL VAL A . n A 1 240 TYR 240 241 241 TYR TYR A . n A 1 241 GLY 241 242 242 GLY GLY A . n A 1 242 THR 242 243 243 THR THR A . n A 1 243 ALA 243 244 244 ALA ALA A . n A 1 244 ASN 244 245 245 ASN ASN A . n A 1 245 ASP 245 246 246 ASP ASP A . n A 1 246 TYR 246 247 247 TYR TYR A . n A 1 247 ALA 247 248 248 ALA ALA A . n A 1 248 VAL 248 249 249 VAL VAL A . n A 1 249 VAL 249 250 250 VAL VAL A . n A 1 250 TRP 250 251 251 TRP TRP A . n A 1 251 PRO 251 252 252 PRO PRO A . n A 1 252 THR 252 254 254 THR THR A . n A 1 253 GLY 253 255 255 GLY GLY A . n A 1 254 ARG 254 256 256 ARG ARG A . n A 1 255 ALA 255 257 257 ALA ALA A . n A 1 256 PRO 256 258 258 PRO PRO A . n A 1 257 ILE 257 259 259 ILE ILE A . n A 1 258 VAL 258 260 260 VAL VAL A . n A 1 259 LEU 259 261 261 LEU LEU A . n A 1 260 ALA 260 262 262 ALA ALA A . n A 1 261 VAL 261 263 263 VAL VAL A . n A 1 262 TYR 262 264 264 TYR TYR A . n A 1 263 THR 263 265 265 THR THR A . n A 1 264 ARG 264 266 266 ARG ARG A . n A 1 265 ALA 265 267 267 ALA ALA A . n A 1 266 PRO 266 268 268 PRO PRO A . n A 1 267 ASN 267 269 269 ASN ASN A . n A 1 268 LYS 268 270 270 LYS LYS A . n A 1 269 ASP 269 271 271 ASP ASP A . n A 1 270 ASP 270 272 272 ASP ASP A . n A 1 271 LYS 271 273 273 LYS LYS A . n A 1 272 HIS 272 274 274 HIS HIS A . n A 1 273 SER 273 275 275 SER SER A . n A 1 274 GLU 274 276 276 GLU GLU A . n A 1 275 ALA 275 277 277 ALA ALA A . n A 1 276 VAL 276 278 278 VAL VAL A . n A 1 277 ILE 277 279 279 ILE ILE A . n A 1 278 ALA 278 280 280 ALA ALA A . n A 1 279 ALA 279 281 281 ALA ALA A . n A 1 280 ALA 280 282 282 ALA ALA A . n A 1 281 ALA 281 283 283 ALA ALA A . n A 1 282 ARG 282 284 284 ARG ARG A . n A 1 283 LEU 283 285 285 LEU LEU A . n A 1 284 ALA 284 286 286 ALA ALA A . n A 1 285 LEU 285 287 287 LEU LEU A . n A 1 286 GLU 286 288 288 GLU GLU A . n A 1 287 GLY 287 289 289 GLY GLY A . n A 1 288 LEU 288 290 290 LEU LEU A . n A 1 289 GLY 289 291 291 GLY GLY A . n A 1 290 VAL 290 292 292 VAL VAL A . n A 1 291 ASN 291 293 ? ? ? A . n A 1 292 GLY 292 294 ? ? ? A . n A 1 293 GLN 293 295 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8YF 1 301 301 8YF 8YF A . C 3 HOH 1 401 24 HOH HOH A . C 3 HOH 2 402 27 HOH HOH A . C 3 HOH 3 403 20 HOH HOH A . C 3 HOH 4 404 48 HOH HOH A . C 3 HOH 5 405 1 HOH HOH A . C 3 HOH 6 406 31 HOH HOH A . C 3 HOH 7 407 85 HOH HOH A . C 3 HOH 8 408 14 HOH HOH A . C 3 HOH 9 409 115 HOH HOH A . C 3 HOH 10 410 37 HOH HOH A . C 3 HOH 11 411 35 HOH HOH A . C 3 HOH 12 412 63 HOH HOH A . C 3 HOH 13 413 9 HOH HOH A . C 3 HOH 14 414 7 HOH HOH A . C 3 HOH 15 415 94 HOH HOH A . C 3 HOH 16 416 45 HOH HOH A . C 3 HOH 17 417 58 HOH HOH A . C 3 HOH 18 418 62 HOH HOH A . C 3 HOH 19 419 122 HOH HOH A . C 3 HOH 20 420 135 HOH HOH A . C 3 HOH 21 421 41 HOH HOH A . C 3 HOH 22 422 3 HOH HOH A . C 3 HOH 23 423 123 HOH HOH A . C 3 HOH 24 424 13 HOH HOH A . C 3 HOH 25 425 28 HOH HOH A . C 3 HOH 26 426 90 HOH HOH A . C 3 HOH 27 427 49 HOH HOH A . C 3 HOH 28 428 38 HOH HOH A . C 3 HOH 29 429 86 HOH HOH A . C 3 HOH 30 430 12 HOH HOH A . C 3 HOH 31 431 72 HOH HOH A . C 3 HOH 32 432 133 HOH HOH A . C 3 HOH 33 433 128 HOH HOH A . C 3 HOH 34 434 88 HOH HOH A . C 3 HOH 35 435 19 HOH HOH A . C 3 HOH 36 436 103 HOH HOH A . C 3 HOH 37 437 68 HOH HOH A . C 3 HOH 38 438 30 HOH HOH A . C 3 HOH 39 439 67 HOH HOH A . C 3 HOH 40 440 77 HOH HOH A . C 3 HOH 41 441 84 HOH HOH A . C 3 HOH 42 442 50 HOH HOH A . C 3 HOH 43 443 4 HOH HOH A . C 3 HOH 44 444 125 HOH HOH A . C 3 HOH 45 445 26 HOH HOH A . C 3 HOH 46 446 39 HOH HOH A . C 3 HOH 47 447 119 HOH HOH A . C 3 HOH 48 448 105 HOH HOH A . C 3 HOH 49 449 2 HOH HOH A . C 3 HOH 50 450 36 HOH HOH A . C 3 HOH 51 451 21 HOH HOH A . C 3 HOH 52 452 80 HOH HOH A . C 3 HOH 53 453 139 HOH HOH A . C 3 HOH 54 454 73 HOH HOH A . C 3 HOH 55 455 22 HOH HOH A . C 3 HOH 56 456 75 HOH HOH A . C 3 HOH 57 457 17 HOH HOH A . C 3 HOH 58 458 5 HOH HOH A . C 3 HOH 59 459 53 HOH HOH A . C 3 HOH 60 460 55 HOH HOH A . C 3 HOH 61 461 11 HOH HOH A . C 3 HOH 62 462 95 HOH HOH A . C 3 HOH 63 463 61 HOH HOH A . C 3 HOH 64 464 8 HOH HOH A . C 3 HOH 65 465 60 HOH HOH A . C 3 HOH 66 466 137 HOH HOH A . C 3 HOH 67 467 112 HOH HOH A . C 3 HOH 68 468 144 HOH HOH A . C 3 HOH 69 469 42 HOH HOH A . C 3 HOH 70 470 10 HOH HOH A . C 3 HOH 71 471 32 HOH HOH A . C 3 HOH 72 472 52 HOH HOH A . C 3 HOH 73 473 29 HOH HOH A . C 3 HOH 74 474 129 HOH HOH A . C 3 HOH 75 475 81 HOH HOH A . C 3 HOH 76 476 54 HOH HOH A . C 3 HOH 77 477 47 HOH HOH A . C 3 HOH 78 478 43 HOH HOH A . C 3 HOH 79 479 25 HOH HOH A . C 3 HOH 80 480 74 HOH HOH A . C 3 HOH 81 481 69 HOH HOH A . C 3 HOH 82 482 111 HOH HOH A . C 3 HOH 83 483 23 HOH HOH A . C 3 HOH 84 484 136 HOH HOH A . C 3 HOH 85 485 15 HOH HOH A . C 3 HOH 86 486 33 HOH HOH A . C 3 HOH 87 487 40 HOH HOH A . C 3 HOH 88 488 59 HOH HOH A . C 3 HOH 89 489 51 HOH HOH A . C 3 HOH 90 490 87 HOH HOH A . C 3 HOH 91 491 117 HOH HOH A . C 3 HOH 92 492 79 HOH HOH A . C 3 HOH 93 493 34 HOH HOH A . C 3 HOH 94 494 143 HOH HOH A . C 3 HOH 95 495 116 HOH HOH A . C 3 HOH 96 496 64 HOH HOH A . C 3 HOH 97 497 91 HOH HOH A . C 3 HOH 98 498 78 HOH HOH A . C 3 HOH 99 499 124 HOH HOH A . C 3 HOH 100 500 106 HOH HOH A . C 3 HOH 101 501 104 HOH HOH A . C 3 HOH 102 502 100 HOH HOH A . C 3 HOH 103 503 18 HOH HOH A . C 3 HOH 104 504 89 HOH HOH A . C 3 HOH 105 505 121 HOH HOH A . C 3 HOH 106 506 98 HOH HOH A . C 3 HOH 107 507 149 HOH HOH A . C 3 HOH 108 508 150 HOH HOH A . C 3 HOH 109 509 114 HOH HOH A . C 3 HOH 110 510 109 HOH HOH A . C 3 HOH 111 511 93 HOH HOH A . C 3 HOH 112 512 108 HOH HOH A . C 3 HOH 113 513 44 HOH HOH A . C 3 HOH 114 514 113 HOH HOH A . C 3 HOH 115 515 147 HOH HOH A . C 3 HOH 116 516 102 HOH HOH A . C 3 HOH 117 517 71 HOH HOH A . C 3 HOH 118 518 57 HOH HOH A . C 3 HOH 119 519 126 HOH HOH A . C 3 HOH 120 520 142 HOH HOH A . C 3 HOH 121 521 97 HOH HOH A . C 3 HOH 122 522 16 HOH HOH A . C 3 HOH 123 523 134 HOH HOH A . C 3 HOH 124 524 92 HOH HOH A . C 3 HOH 125 525 131 HOH HOH A . C 3 HOH 126 526 145 HOH HOH A . C 3 HOH 127 527 130 HOH HOH A . C 3 HOH 128 528 82 HOH HOH A . C 3 HOH 129 529 107 HOH HOH A . C 3 HOH 130 530 46 HOH HOH A . C 3 HOH 131 531 120 HOH HOH A . C 3 HOH 132 532 141 HOH HOH A . C 3 HOH 133 533 146 HOH HOH A . C 3 HOH 134 534 65 HOH HOH A . C 3 HOH 135 535 70 HOH HOH A . C 3 HOH 136 536 56 HOH HOH A . C 3 HOH 137 537 99 HOH HOH A . C 3 HOH 138 538 96 HOH HOH A . C 3 HOH 139 539 6 HOH HOH A . C 3 HOH 140 540 132 HOH HOH A . C 3 HOH 141 541 138 HOH HOH A . C 3 HOH 142 542 118 HOH HOH A . C 3 HOH 143 543 101 HOH HOH A . C 3 HOH 144 544 110 HOH HOH A . C 3 HOH 145 545 76 HOH HOH A . C 3 HOH 146 546 148 HOH HOH A . C 3 HOH 147 547 66 HOH HOH A . C 3 HOH 148 548 83 HOH HOH A . C 3 HOH 149 549 127 HOH HOH A . C 3 HOH 150 550 140 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 443 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-09 2 'Structure model' 1 1 2020-12-23 3 'Structure model' 1 2 2021-07-21 4 'Structure model' 1 3 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_citation_author.identifier_ORCID' 11 2 'Structure model' '_citation_author.name' 12 3 'Structure model' '_citation.journal_volume' 13 3 'Structure model' '_citation.page_first' 14 3 'Structure model' '_citation.page_last' 15 3 'Structure model' '_citation.title' 16 3 'Structure model' '_citation_author.identifier_ORCID' 17 4 'Structure model' '_database_2.pdbx_DOI' 18 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_phasing_MR.entry_id 6XJ8 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 5.420 _pdbx_phasing_MR.d_res_low_rotation 36.230 _pdbx_phasing_MR.d_res_high_translation ? _pdbx_phasing_MR.d_res_low_translation ? _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.7.4 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.18.2_3874 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? 7.3.0 5 # _pdbx_entry_details.entry_id 6XJ8 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 69 ? ? 52.11 -150.98 2 1 TRP A 105 ? ? 57.59 74.11 3 1 ARG A 220 ? ? -121.35 -117.21 4 1 ASP A 246 ? ? -171.08 129.44 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 550 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.40 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A TYR 4 ? A TYR 4 5 1 Y 1 A ARG 5 ? A ARG 5 6 1 Y 1 A ARG 6 ? A ARG 6 7 1 Y 1 A LEU 7 ? A LEU 7 8 1 Y 1 A VAL 8 ? A VAL 8 9 1 Y 1 A LEU 9 ? A LEU 9 10 1 Y 1 A LEU 10 ? A LEU 10 11 1 Y 1 A SER 11 ? A SER 11 12 1 Y 1 A CYS 12 ? A CYS 12 13 1 Y 1 A LEU 13 ? A LEU 13 14 1 Y 1 A SER 14 ? A SER 14 15 1 Y 1 A TRP 15 ? A TRP 15 16 1 Y 1 A PRO 16 ? A PRO 16 17 1 Y 1 A LEU 17 ? A LEU 17 18 1 Y 1 A ALA 18 ? A ALA 18 19 1 Y 1 A GLY 19 ? A GLY 19 20 1 Y 1 A PHE 20 ? A PHE 20 21 1 Y 1 A SER 21 ? A SER 21 22 1 Y 1 A ALA 22 ? A ALA 22 23 1 Y 1 A THR 23 ? A THR 23 24 1 Y 1 A ALA 24 ? A ALA 24 25 1 Y 1 A LEU 25 ? A LEU 25 26 1 Y 1 A ASN 293 ? A ASN 291 27 1 Y 1 A GLY 294 ? A GLY 292 28 1 Y 1 A GLN 295 ? A GLN 293 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8YF C62 C N N 1 8YF C61 C N R 2 8YF O62 O N N 3 8YF C6 C N S 4 8YF C7 C N N 5 8YF O71 O N N 6 8YF O72 O N N 7 8YF C5 C N R 8 8YF C1 C N N 9 8YF N4 N N N 10 8YF C3 C N N 11 8YF C31 C N N 12 8YF O31 O N N 13 8YF O32 O N N 14 8YF C2 C N N 15 8YF S21 S N N 16 8YF C22 C N N 17 8YF C23 C N N 18 8YF N24 N N N 19 8YF C25 C N N 20 8YF N26 N N N 21 8YF H1 H N N 22 8YF H2 H N N 23 8YF H3 H N N 24 8YF H4 H N N 25 8YF H5 H N N 26 8YF H6 H N N 27 8YF H7 H N N 28 8YF H8 H N N 29 8YF H9 H N N 30 8YF H10 H N N 31 8YF H11 H N N 32 8YF H12 H N N 33 8YF H13 H N N 34 8YF H14 H N N 35 8YF H15 H N N 36 8YF H16 H N N 37 8YF H17 H N N 38 8YF H18 H N N 39 8YF H20 H N N 40 ALA N N N N 41 ALA CA C N S 42 ALA C C N N 43 ALA O O N N 44 ALA CB C N N 45 ALA OXT O N N 46 ALA H H N N 47 ALA H2 H N N 48 ALA HA H N N 49 ALA HB1 H N N 50 ALA HB2 H N N 51 ALA HB3 H N N 52 ALA HXT H N N 53 ARG N N N N 54 ARG CA C N S 55 ARG C C N N 56 ARG O O N N 57 ARG CB C N N 58 ARG CG C N N 59 ARG CD C N N 60 ARG NE N N N 61 ARG CZ C N N 62 ARG NH1 N N N 63 ARG NH2 N N N 64 ARG OXT O N N 65 ARG H H N N 66 ARG H2 H N N 67 ARG HA H N N 68 ARG HB2 H N N 69 ARG HB3 H N N 70 ARG HG2 H N N 71 ARG HG3 H N N 72 ARG HD2 H N N 73 ARG HD3 H N N 74 ARG HE H N N 75 ARG HH11 H N N 76 ARG HH12 H N N 77 ARG HH21 H N N 78 ARG HH22 H N N 79 ARG HXT H N N 80 ASN N N N N 81 ASN CA C N S 82 ASN C C N N 83 ASN O O N N 84 ASN CB C N N 85 ASN CG C N N 86 ASN OD1 O N N 87 ASN ND2 N N N 88 ASN OXT O N N 89 ASN H H N N 90 ASN H2 H N N 91 ASN HA H N N 92 ASN HB2 H N N 93 ASN HB3 H N N 94 ASN HD21 H N N 95 ASN HD22 H N N 96 ASN HXT H N N 97 ASP N N N N 98 ASP CA C N S 99 ASP C C N N 100 ASP O O N N 101 ASP CB C N N 102 ASP CG C N N 103 ASP OD1 O N N 104 ASP OD2 O N N 105 ASP OXT O N N 106 ASP H H N N 107 ASP H2 H N N 108 ASP HA H N N 109 ASP HB2 H N N 110 ASP HB3 H N N 111 ASP HD2 H N N 112 ASP HXT H N N 113 CYS N N N N 114 CYS CA C N R 115 CYS C C N N 116 CYS O O N N 117 CYS CB C N N 118 CYS SG S N N 119 CYS OXT O N N 120 CYS H H N N 121 CYS H2 H N N 122 CYS HA H N N 123 CYS HB2 H N N 124 CYS HB3 H N N 125 CYS HG H N N 126 CYS HXT H N N 127 GLN N N N N 128 GLN CA C N S 129 GLN C C N N 130 GLN O O N N 131 GLN CB C N N 132 GLN CG C N N 133 GLN CD C N N 134 GLN OE1 O N N 135 GLN NE2 N N N 136 GLN OXT O N N 137 GLN H H N N 138 GLN H2 H N N 139 GLN HA H N N 140 GLN HB2 H N N 141 GLN HB3 H N N 142 GLN HG2 H N N 143 GLN HG3 H N N 144 GLN HE21 H N N 145 GLN HE22 H N N 146 GLN HXT H N N 147 GLU N N N N 148 GLU CA C N S 149 GLU C C N N 150 GLU O O N N 151 GLU CB C N N 152 GLU CG C N N 153 GLU CD C N N 154 GLU OE1 O N N 155 GLU OE2 O N N 156 GLU OXT O N N 157 GLU H H N N 158 GLU H2 H N N 159 GLU HA H N N 160 GLU HB2 H N N 161 GLU HB3 H N N 162 GLU HG2 H N N 163 GLU HG3 H N N 164 GLU HE2 H N N 165 GLU HXT H N N 166 GLY N N N N 167 GLY CA C N N 168 GLY C C N N 169 GLY O O N N 170 GLY OXT O N N 171 GLY H H N N 172 GLY H2 H N N 173 GLY HA2 H N N 174 GLY HA3 H N N 175 GLY HXT H N N 176 HIS N N N N 177 HIS CA C N S 178 HIS C C N N 179 HIS O O N N 180 HIS CB C N N 181 HIS CG C Y N 182 HIS ND1 N Y N 183 HIS CD2 C Y N 184 HIS CE1 C Y N 185 HIS NE2 N Y N 186 HIS OXT O N N 187 HIS H H N N 188 HIS H2 H N N 189 HIS HA H N N 190 HIS HB2 H N N 191 HIS HB3 H N N 192 HIS HD1 H N N 193 HIS HD2 H N N 194 HIS HE1 H N N 195 HIS HE2 H N N 196 HIS HXT H N N 197 HOH O O N N 198 HOH H1 H N N 199 HOH H2 H N N 200 ILE N N N N 201 ILE CA C N S 202 ILE C C N N 203 ILE O O N N 204 ILE CB C N S 205 ILE CG1 C N N 206 ILE CG2 C N N 207 ILE CD1 C N N 208 ILE OXT O N N 209 ILE H H N N 210 ILE H2 H N N 211 ILE HA H N N 212 ILE HB H N N 213 ILE HG12 H N N 214 ILE HG13 H N N 215 ILE HG21 H N N 216 ILE HG22 H N N 217 ILE HG23 H N N 218 ILE HD11 H N N 219 ILE HD12 H N N 220 ILE HD13 H N N 221 ILE HXT H N N 222 LEU N N N N 223 LEU CA C N S 224 LEU C C N N 225 LEU O O N N 226 LEU CB C N N 227 LEU CG C N N 228 LEU CD1 C N N 229 LEU CD2 C N N 230 LEU OXT O N N 231 LEU H H N N 232 LEU H2 H N N 233 LEU HA H N N 234 LEU HB2 H N N 235 LEU HB3 H N N 236 LEU HG H N N 237 LEU HD11 H N N 238 LEU HD12 H N N 239 LEU HD13 H N N 240 LEU HD21 H N N 241 LEU HD22 H N N 242 LEU HD23 H N N 243 LEU HXT H N N 244 LYS N N N N 245 LYS CA C N S 246 LYS C C N N 247 LYS O O N N 248 LYS CB C N N 249 LYS CG C N N 250 LYS CD C N N 251 LYS CE C N N 252 LYS NZ N N N 253 LYS OXT O N N 254 LYS H H N N 255 LYS H2 H N N 256 LYS HA H N N 257 LYS HB2 H N N 258 LYS HB3 H N N 259 LYS HG2 H N N 260 LYS HG3 H N N 261 LYS HD2 H N N 262 LYS HD3 H N N 263 LYS HE2 H N N 264 LYS HE3 H N N 265 LYS HZ1 H N N 266 LYS HZ2 H N N 267 LYS HZ3 H N N 268 LYS HXT H N N 269 MET N N N N 270 MET CA C N S 271 MET C C N N 272 MET O O N N 273 MET CB C N N 274 MET CG C N N 275 MET SD S N N 276 MET CE C N N 277 MET OXT O N N 278 MET H H N N 279 MET H2 H N N 280 MET HA H N N 281 MET HB2 H N N 282 MET HB3 H N N 283 MET HG2 H N N 284 MET HG3 H N N 285 MET HE1 H N N 286 MET HE2 H N N 287 MET HE3 H N N 288 MET HXT H N N 289 PHE N N N N 290 PHE CA C N S 291 PHE C C N N 292 PHE O O N N 293 PHE CB C N N 294 PHE CG C Y N 295 PHE CD1 C Y N 296 PHE CD2 C Y N 297 PHE CE1 C Y N 298 PHE CE2 C Y N 299 PHE CZ C Y N 300 PHE OXT O N N 301 PHE H H N N 302 PHE H2 H N N 303 PHE HA H N N 304 PHE HB2 H N N 305 PHE HB3 H N N 306 PHE HD1 H N N 307 PHE HD2 H N N 308 PHE HE1 H N N 309 PHE HE2 H N N 310 PHE HZ H N N 311 PHE HXT H N N 312 PRO N N N N 313 PRO CA C N S 314 PRO C C N N 315 PRO O O N N 316 PRO CB C N N 317 PRO CG C N N 318 PRO CD C N N 319 PRO OXT O N N 320 PRO H H N N 321 PRO HA H N N 322 PRO HB2 H N N 323 PRO HB3 H N N 324 PRO HG2 H N N 325 PRO HG3 H N N 326 PRO HD2 H N N 327 PRO HD3 H N N 328 PRO HXT H N N 329 SER N N N N 330 SER CA C N S 331 SER C C N N 332 SER O O N N 333 SER CB C N N 334 SER OG O N N 335 SER OXT O N N 336 SER H H N N 337 SER H2 H N N 338 SER HA H N N 339 SER HB2 H N N 340 SER HB3 H N N 341 SER HG H N N 342 SER HXT H N N 343 THR N N N N 344 THR CA C N S 345 THR C C N N 346 THR O O N N 347 THR CB C N R 348 THR OG1 O N N 349 THR CG2 C N N 350 THR OXT O N N 351 THR H H N N 352 THR H2 H N N 353 THR HA H N N 354 THR HB H N N 355 THR HG1 H N N 356 THR HG21 H N N 357 THR HG22 H N N 358 THR HG23 H N N 359 THR HXT H N N 360 TRP N N N N 361 TRP CA C N S 362 TRP C C N N 363 TRP O O N N 364 TRP CB C N N 365 TRP CG C Y N 366 TRP CD1 C Y N 367 TRP CD2 C Y N 368 TRP NE1 N Y N 369 TRP CE2 C Y N 370 TRP CE3 C Y N 371 TRP CZ2 C Y N 372 TRP CZ3 C Y N 373 TRP CH2 C Y N 374 TRP OXT O N N 375 TRP H H N N 376 TRP H2 H N N 377 TRP HA H N N 378 TRP HB2 H N N 379 TRP HB3 H N N 380 TRP HD1 H N N 381 TRP HE1 H N N 382 TRP HE3 H N N 383 TRP HZ2 H N N 384 TRP HZ3 H N N 385 TRP HH2 H N N 386 TRP HXT H N N 387 TYR N N N N 388 TYR CA C N S 389 TYR C C N N 390 TYR O O N N 391 TYR CB C N N 392 TYR CG C Y N 393 TYR CD1 C Y N 394 TYR CD2 C Y N 395 TYR CE1 C Y N 396 TYR CE2 C Y N 397 TYR CZ C Y N 398 TYR OH O N N 399 TYR OXT O N N 400 TYR H H N N 401 TYR H2 H N N 402 TYR HA H N N 403 TYR HB2 H N N 404 TYR HB3 H N N 405 TYR HD1 H N N 406 TYR HD2 H N N 407 TYR HE1 H N N 408 TYR HE2 H N N 409 TYR HH H N N 410 TYR HXT H N N 411 VAL N N N N 412 VAL CA C N S 413 VAL C C N N 414 VAL O O N N 415 VAL CB C N N 416 VAL CG1 C N N 417 VAL CG2 C N N 418 VAL OXT O N N 419 VAL H H N N 420 VAL H2 H N N 421 VAL HA H N N 422 VAL HB H N N 423 VAL HG11 H N N 424 VAL HG12 H N N 425 VAL HG13 H N N 426 VAL HG21 H N N 427 VAL HG22 H N N 428 VAL HG23 H N N 429 VAL HXT H N N 430 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8YF N26 C25 doub N N 1 8YF C25 N24 sing N N 2 8YF N24 C23 sing N N 3 8YF C23 C22 sing N N 4 8YF C22 S21 sing N N 5 8YF O31 C31 doub N N 6 8YF O32 C31 sing N N 7 8YF S21 C2 sing N N 8 8YF C31 C3 sing N N 9 8YF C3 C2 doub N N 10 8YF C3 N4 sing N N 11 8YF C2 C1 sing N N 12 8YF N4 C5 sing N N 13 8YF C1 C5 sing N N 14 8YF C5 C6 sing N N 15 8YF O71 C7 doub N N 16 8YF C7 C6 sing N N 17 8YF C7 O72 sing N N 18 8YF C6 C61 sing N N 19 8YF C61 C62 sing N N 20 8YF C61 O62 sing N N 21 8YF C62 H1 sing N N 22 8YF C62 H2 sing N N 23 8YF C62 H3 sing N N 24 8YF C61 H4 sing N N 25 8YF O62 H5 sing N N 26 8YF C6 H6 sing N N 27 8YF O72 H7 sing N N 28 8YF C5 H8 sing N N 29 8YF C1 H9 sing N N 30 8YF C1 H10 sing N N 31 8YF N4 H11 sing N N 32 8YF O32 H12 sing N N 33 8YF C22 H13 sing N N 34 8YF C22 H14 sing N N 35 8YF C23 H15 sing N N 36 8YF C23 H16 sing N N 37 8YF C25 H17 sing N N 38 8YF N26 H18 sing N N 39 8YF N24 H20 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 GLN N CA sing N N 123 GLN N H sing N N 124 GLN N H2 sing N N 125 GLN CA C sing N N 126 GLN CA CB sing N N 127 GLN CA HA sing N N 128 GLN C O doub N N 129 GLN C OXT sing N N 130 GLN CB CG sing N N 131 GLN CB HB2 sing N N 132 GLN CB HB3 sing N N 133 GLN CG CD sing N N 134 GLN CG HG2 sing N N 135 GLN CG HG3 sing N N 136 GLN CD OE1 doub N N 137 GLN CD NE2 sing N N 138 GLN NE2 HE21 sing N N 139 GLN NE2 HE22 sing N N 140 GLN OXT HXT sing N N 141 GLU N CA sing N N 142 GLU N H sing N N 143 GLU N H2 sing N N 144 GLU CA C sing N N 145 GLU CA CB sing N N 146 GLU CA HA sing N N 147 GLU C O doub N N 148 GLU C OXT sing N N 149 GLU CB CG sing N N 150 GLU CB HB2 sing N N 151 GLU CB HB3 sing N N 152 GLU CG CD sing N N 153 GLU CG HG2 sing N N 154 GLU CG HG3 sing N N 155 GLU CD OE1 doub N N 156 GLU CD OE2 sing N N 157 GLU OE2 HE2 sing N N 158 GLU OXT HXT sing N N 159 GLY N CA sing N N 160 GLY N H sing N N 161 GLY N H2 sing N N 162 GLY CA C sing N N 163 GLY CA HA2 sing N N 164 GLY CA HA3 sing N N 165 GLY C O doub N N 166 GLY C OXT sing N N 167 GLY OXT HXT sing N N 168 HIS N CA sing N N 169 HIS N H sing N N 170 HIS N H2 sing N N 171 HIS CA C sing N N 172 HIS CA CB sing N N 173 HIS CA HA sing N N 174 HIS C O doub N N 175 HIS C OXT sing N N 176 HIS CB CG sing N N 177 HIS CB HB2 sing N N 178 HIS CB HB3 sing N N 179 HIS CG ND1 sing Y N 180 HIS CG CD2 doub Y N 181 HIS ND1 CE1 doub Y N 182 HIS ND1 HD1 sing N N 183 HIS CD2 NE2 sing Y N 184 HIS CD2 HD2 sing N N 185 HIS CE1 NE2 sing Y N 186 HIS CE1 HE1 sing N N 187 HIS NE2 HE2 sing N N 188 HIS OXT HXT sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 ILE N CA sing N N 192 ILE N H sing N N 193 ILE N H2 sing N N 194 ILE CA C sing N N 195 ILE CA CB sing N N 196 ILE CA HA sing N N 197 ILE C O doub N N 198 ILE C OXT sing N N 199 ILE CB CG1 sing N N 200 ILE CB CG2 sing N N 201 ILE CB HB sing N N 202 ILE CG1 CD1 sing N N 203 ILE CG1 HG12 sing N N 204 ILE CG1 HG13 sing N N 205 ILE CG2 HG21 sing N N 206 ILE CG2 HG22 sing N N 207 ILE CG2 HG23 sing N N 208 ILE CD1 HD11 sing N N 209 ILE CD1 HD12 sing N N 210 ILE CD1 HD13 sing N N 211 ILE OXT HXT sing N N 212 LEU N CA sing N N 213 LEU N H sing N N 214 LEU N H2 sing N N 215 LEU CA C sing N N 216 LEU CA CB sing N N 217 LEU CA HA sing N N 218 LEU C O doub N N 219 LEU C OXT sing N N 220 LEU CB CG sing N N 221 LEU CB HB2 sing N N 222 LEU CB HB3 sing N N 223 LEU CG CD1 sing N N 224 LEU CG CD2 sing N N 225 LEU CG HG sing N N 226 LEU CD1 HD11 sing N N 227 LEU CD1 HD12 sing N N 228 LEU CD1 HD13 sing N N 229 LEU CD2 HD21 sing N N 230 LEU CD2 HD22 sing N N 231 LEU CD2 HD23 sing N N 232 LEU OXT HXT sing N N 233 LYS N CA sing N N 234 LYS N H sing N N 235 LYS N H2 sing N N 236 LYS CA C sing N N 237 LYS CA CB sing N N 238 LYS CA HA sing N N 239 LYS C O doub N N 240 LYS C OXT sing N N 241 LYS CB CG sing N N 242 LYS CB HB2 sing N N 243 LYS CB HB3 sing N N 244 LYS CG CD sing N N 245 LYS CG HG2 sing N N 246 LYS CG HG3 sing N N 247 LYS CD CE sing N N 248 LYS CD HD2 sing N N 249 LYS CD HD3 sing N N 250 LYS CE NZ sing N N 251 LYS CE HE2 sing N N 252 LYS CE HE3 sing N N 253 LYS NZ HZ1 sing N N 254 LYS NZ HZ2 sing N N 255 LYS NZ HZ3 sing N N 256 LYS OXT HXT sing N N 257 MET N CA sing N N 258 MET N H sing N N 259 MET N H2 sing N N 260 MET CA C sing N N 261 MET CA CB sing N N 262 MET CA HA sing N N 263 MET C O doub N N 264 MET C OXT sing N N 265 MET CB CG sing N N 266 MET CB HB2 sing N N 267 MET CB HB3 sing N N 268 MET CG SD sing N N 269 MET CG HG2 sing N N 270 MET CG HG3 sing N N 271 MET SD CE sing N N 272 MET CE HE1 sing N N 273 MET CE HE2 sing N N 274 MET CE HE3 sing N N 275 MET OXT HXT sing N N 276 PHE N CA sing N N 277 PHE N H sing N N 278 PHE N H2 sing N N 279 PHE CA C sing N N 280 PHE CA CB sing N N 281 PHE CA HA sing N N 282 PHE C O doub N N 283 PHE C OXT sing N N 284 PHE CB CG sing N N 285 PHE CB HB2 sing N N 286 PHE CB HB3 sing N N 287 PHE CG CD1 doub Y N 288 PHE CG CD2 sing Y N 289 PHE CD1 CE1 sing Y N 290 PHE CD1 HD1 sing N N 291 PHE CD2 CE2 doub Y N 292 PHE CD2 HD2 sing N N 293 PHE CE1 CZ doub Y N 294 PHE CE1 HE1 sing N N 295 PHE CE2 CZ sing Y N 296 PHE CE2 HE2 sing N N 297 PHE CZ HZ sing N N 298 PHE OXT HXT sing N N 299 PRO N CA sing N N 300 PRO N CD sing N N 301 PRO N H sing N N 302 PRO CA C sing N N 303 PRO CA CB sing N N 304 PRO CA HA sing N N 305 PRO C O doub N N 306 PRO C OXT sing N N 307 PRO CB CG sing N N 308 PRO CB HB2 sing N N 309 PRO CB HB3 sing N N 310 PRO CG CD sing N N 311 PRO CG HG2 sing N N 312 PRO CG HG3 sing N N 313 PRO CD HD2 sing N N 314 PRO CD HD3 sing N N 315 PRO OXT HXT sing N N 316 SER N CA sing N N 317 SER N H sing N N 318 SER N H2 sing N N 319 SER CA C sing N N 320 SER CA CB sing N N 321 SER CA HA sing N N 322 SER C O doub N N 323 SER C OXT sing N N 324 SER CB OG sing N N 325 SER CB HB2 sing N N 326 SER CB HB3 sing N N 327 SER OG HG sing N N 328 SER OXT HXT sing N N 329 THR N CA sing N N 330 THR N H sing N N 331 THR N H2 sing N N 332 THR CA C sing N N 333 THR CA CB sing N N 334 THR CA HA sing N N 335 THR C O doub N N 336 THR C OXT sing N N 337 THR CB OG1 sing N N 338 THR CB CG2 sing N N 339 THR CB HB sing N N 340 THR OG1 HG1 sing N N 341 THR CG2 HG21 sing N N 342 THR CG2 HG22 sing N N 343 THR CG2 HG23 sing N N 344 THR OXT HXT sing N N 345 TRP N CA sing N N 346 TRP N H sing N N 347 TRP N H2 sing N N 348 TRP CA C sing N N 349 TRP CA CB sing N N 350 TRP CA HA sing N N 351 TRP C O doub N N 352 TRP C OXT sing N N 353 TRP CB CG sing N N 354 TRP CB HB2 sing N N 355 TRP CB HB3 sing N N 356 TRP CG CD1 doub Y N 357 TRP CG CD2 sing Y N 358 TRP CD1 NE1 sing Y N 359 TRP CD1 HD1 sing N N 360 TRP CD2 CE2 doub Y N 361 TRP CD2 CE3 sing Y N 362 TRP NE1 CE2 sing Y N 363 TRP NE1 HE1 sing N N 364 TRP CE2 CZ2 sing Y N 365 TRP CE3 CZ3 doub Y N 366 TRP CE3 HE3 sing N N 367 TRP CZ2 CH2 doub Y N 368 TRP CZ2 HZ2 sing N N 369 TRP CZ3 CH2 sing Y N 370 TRP CZ3 HZ3 sing N N 371 TRP CH2 HH2 sing N N 372 TRP OXT HXT sing N N 373 TYR N CA sing N N 374 TYR N H sing N N 375 TYR N H2 sing N N 376 TYR CA C sing N N 377 TYR CA CB sing N N 378 TYR CA HA sing N N 379 TYR C O doub N N 380 TYR C OXT sing N N 381 TYR CB CG sing N N 382 TYR CB HB2 sing N N 383 TYR CB HB3 sing N N 384 TYR CG CD1 doub Y N 385 TYR CG CD2 sing Y N 386 TYR CD1 CE1 sing Y N 387 TYR CD1 HD1 sing N N 388 TYR CD2 CE2 doub Y N 389 TYR CD2 HD2 sing N N 390 TYR CE1 CZ doub Y N 391 TYR CE1 HE1 sing N N 392 TYR CE2 CZ sing Y N 393 TYR CE2 HE2 sing N N 394 TYR CZ OH sing N N 395 TYR OH HH sing N N 396 TYR OXT HXT sing N N 397 VAL N CA sing N N 398 VAL N H sing N N 399 VAL N H2 sing N N 400 VAL CA C sing N N 401 VAL CA CB sing N N 402 VAL CA HA sing N N 403 VAL C O doub N N 404 VAL C OXT sing N N 405 VAL CB CG1 sing N N 406 VAL CB CG2 sing N N 407 VAL CB HB sing N N 408 VAL CG1 HG11 sing N N 409 VAL CG1 HG12 sing N N 410 VAL CG1 HG13 sing N N 411 VAL CG2 HG21 sing N N 412 VAL CG2 HG22 sing N N 413 VAL CG2 HG23 sing N N 414 VAL OXT HXT sing N N 415 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number AI032956 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 8YF _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 8YF _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(2R)-2-[(2S,3R)-1,3-bis(oxidanyl)-1-oxidanylidene-butan-2-yl]-4-(2-methanimidamidoethylsulfanyl)-2,3-dihydro-1H-pyrrole -5-carboxylic acid ; 8YF 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5UL8 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #