HEADER TRANSPORT PROTEIN 24-JUN-20 6XJL TITLE STRUCTURE OF THE SM PROTEIN VPS45 COMPND MOL_ID: 1; COMPND 2 MOLECULE: VPS45; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PUTATIVE VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM; SOURCE 3 ORGANISM_TAXID: 209285; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 ROSETTA KEYWDS MEMBRANE TRAFFICKING, SM PROTEIN, THERMOPHILE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.D.JEFFREY,G.S.SHIMAMURA,F.ALLEN,F.M.HUGHSON REVDAT 3 06-MAR-24 6XJL 1 REMARK REVDAT 2 02-SEP-20 6XJL 1 JRNL REVDAT 1 19-AUG-20 6XJL 0 JRNL AUTH T.J.EISEMANN,F.ALLEN,K.LAU,G.R.SHIMAMURA,P.D.JEFFREY, JRNL AUTH 2 F.M.HUGHSON JRNL TITL THE SEC1/MUNC18 PROTEIN VPS45 HOLDS THE QA-SNARE TLG2 IN AN JRNL TITL 2 OPEN CONFORMATION. JRNL REF ELIFE V. 9 2020 JRNL REFN ESSN 2050-084X JRNL PMID 32804076 JRNL DOI 10.7554/ELIFE.60724 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17_3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 45293 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.6500 - 5.0300 1.00 2884 154 0.1931 0.1969 REMARK 3 2 5.0300 - 4.0000 1.00 2757 145 0.1461 0.1766 REMARK 3 3 3.9900 - 3.4900 1.00 2723 155 0.1542 0.2051 REMARK 3 4 3.4900 - 3.1700 1.00 2729 140 0.1745 0.2157 REMARK 3 5 3.1700 - 2.9400 1.00 2721 126 0.1894 0.2437 REMARK 3 6 2.9400 - 2.7700 1.00 2675 155 0.1865 0.2551 REMARK 3 7 2.7700 - 2.6300 1.00 2678 132 0.1805 0.2293 REMARK 3 8 2.6300 - 2.5200 1.00 2696 136 0.1812 0.2477 REMARK 3 9 2.5200 - 2.4200 1.00 2678 146 0.1793 0.2421 REMARK 3 10 2.4200 - 2.3400 0.99 2674 131 0.1883 0.2484 REMARK 3 11 2.3400 - 2.2600 1.00 2668 149 0.1890 0.2167 REMARK 3 12 2.2600 - 2.2000 0.99 2630 155 0.1926 0.2322 REMARK 3 13 2.2000 - 2.1400 0.99 2645 131 0.2020 0.2788 REMARK 3 14 2.1400 - 2.0900 0.99 2660 132 0.2111 0.2619 REMARK 3 15 2.0900 - 2.0400 0.99 2635 143 0.2367 0.2845 REMARK 3 16 2.0400 - 2.0000 0.97 2572 138 0.2615 0.2971 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -3 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0994 2.5638 39.6044 REMARK 3 T TENSOR REMARK 3 T11: 0.2570 T22: 0.2330 REMARK 3 T33: 0.1560 T12: -0.0249 REMARK 3 T13: 0.0020 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.2886 L22: 2.5083 REMARK 3 L33: 1.1440 L12: 1.0112 REMARK 3 L13: -0.2878 L23: -0.7345 REMARK 3 S TENSOR REMARK 3 S11: 0.1885 S12: -0.2190 S13: 0.0160 REMARK 3 S21: 0.3167 S22: -0.2250 S23: 0.0924 REMARK 3 S31: -0.2012 S32: 0.0996 S33: 0.0241 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 489 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0592 0.8383 8.0233 REMARK 3 T TENSOR REMARK 3 T11: 0.2710 T22: 0.2487 REMARK 3 T33: 0.2188 T12: 0.0167 REMARK 3 T13: 0.0445 T23: -0.0362 REMARK 3 L TENSOR REMARK 3 L11: 1.3443 L22: 3.0073 REMARK 3 L33: 2.0631 L12: 0.0962 REMARK 3 L13: -0.2334 L23: -0.3003 REMARK 3 S TENSOR REMARK 3 S11: -0.0356 S12: 0.0263 S13: -0.2436 REMARK 3 S21: -0.1365 S22: -0.0643 S23: 0.0001 REMARK 3 S31: 0.3761 S32: -0.0764 S33: 0.0788 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 490 THROUGH 609 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8042 11.4370 20.1741 REMARK 3 T TENSOR REMARK 3 T11: 0.2039 T22: 0.2943 REMARK 3 T33: 0.1944 T12: -0.0308 REMARK 3 T13: 0.0287 T23: 0.0685 REMARK 3 L TENSOR REMARK 3 L11: 2.2163 L22: 2.4679 REMARK 3 L33: 2.1024 L12: -0.7799 REMARK 3 L13: 0.7473 L23: -0.8306 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: 0.1699 S13: 0.0618 REMARK 3 S21: 0.0298 S22: -0.2122 S23: -0.3927 REMARK 3 S31: -0.0699 S32: 0.4646 S33: 0.1325 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XJL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000250272. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9782 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45356 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.70800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM BROMIDE, 0.2 M REMARK 280 POTASSIUM THIOCYANATE, 0.1 M SODIUM ACETATE PH 6.0, 3% (W/V) REMARK 280 POLYGLYCOLIDE, 5% (W/V) POLYETHYLENE GLYCOL 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.24450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.30750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.97800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.30750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.24450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.97800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 ASP A -14 REMARK 465 TYR A -13 REMARK 465 ASP A -12 REMARK 465 ILE A -11 REMARK 465 PRO A -10 REMARK 465 THR A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 GLY A 20 REMARK 465 ALA A 21 REMARK 465 SER A 22 REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 GLY A 25 REMARK 465 ALA A 26 REMARK 465 HIS A 317 REMARK 465 ASP A 318 REMARK 465 ILE A 319 REMARK 465 GLU A 320 REMARK 465 SER A 321 REMARK 465 ILE A 322 REMARK 465 ALA A 323 REMARK 465 ASP A 324 REMARK 465 MET A 325 REMARK 465 LYS A 326 REMARK 465 ARG A 327 REMARK 465 PHE A 328 REMARK 465 MET A 329 REMARK 465 GLU A 330 REMARK 465 GLU A 331 REMARK 465 TYR A 332 REMARK 465 ALA A 450 REMARK 465 ALA A 451 REMARK 465 GLN A 452 REMARK 465 PRO A 453 REMARK 465 GLY A 454 REMARK 465 ALA A 455 REMARK 465 ASP A 456 REMARK 465 SER A 457 REMARK 465 SER A 458 REMARK 465 GLY A 459 REMARK 465 VAL A 460 REMARK 465 GLU A 461 REMARK 465 SER A 462 REMARK 465 LEU A 463 REMARK 465 PHE A 464 REMARK 465 GLU A 465 REMARK 465 THR A 466 REMARK 465 THR A 467 REMARK 465 PRO A 468 REMARK 465 GLY A 469 REMARK 465 THR A 470 REMARK 465 VAL A 471 REMARK 465 VAL A 472 REMARK 465 ALA A 473 REMARK 465 ASN A 474 REMARK 465 LEU A 475 REMARK 465 PHE A 476 REMARK 465 GLY A 477 REMARK 465 VAL A 478 REMARK 465 GLY A 479 REMARK 465 SER A 480 REMARK 465 THR A 524 REMARK 465 THR A 525 REMARK 465 SER A 526 REMARK 465 ALA A 527 REMARK 465 GLY A 528 REMARK 465 PRO A 529 REMARK 465 GLY A 530 REMARK 465 ALA A 531 REMARK 465 SER A 532 REMARK 465 SER A 533 REMARK 465 GLY A 534 REMARK 465 SER A 535 REMARK 465 THR A 536 REMARK 465 SER A 537 REMARK 465 GLY A 538 REMARK 465 LEU A 539 REMARK 465 GLY A 540 REMARK 465 SER A 541 REMARK 465 VAL A 542 REMARK 465 THR A 543 REMARK 465 LYS A 544 REMARK 465 ASP A 545 REMARK 465 LYS A 546 REMARK 465 GLY A 610 REMARK 465 ILE A 611 REMARK 465 GLY A 612 REMARK 465 SER A 613 REMARK 465 GLY A 614 REMARK 465 GLY A 615 REMARK 465 SER A 616 REMARK 465 GLY A 617 REMARK 465 PRO A 618 REMARK 465 GLY A 619 REMARK 465 SER A 620 REMARK 465 ALA A 621 REMARK 465 ARG A 622 REMARK 465 ARG A 623 REMARK 465 ARG A 624 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 314 CG CD CE NZ REMARK 470 SER A 315 OG REMARK 470 THR A 316 OG1 CG2 REMARK 470 ARG A 336 CG CD NE CZ NH1 NH2 REMARK 470 SER A 481 CB OG REMARK 470 LYS A 489 CG CD CE NZ REMARK 470 GLU A 492 CG CD OE1 OE2 REMARK 470 TYR A 495 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 135 46.46 -85.97 REMARK 500 ILE A 141 -59.02 -127.36 REMARK 500 SER A 159 -147.96 -92.91 REMARK 500 GLU A 492 18.15 -69.70 REMARK 500 ASN A 493 -96.99 13.20 REMARK 500 VAL A 494 -64.44 40.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6XM1 RELATED DB: PDB REMARK 900 SM PROTEIN VPS45 IN COMPLEX WITH QA SNARE TLG2 (1-310) REMARK 900 RELATED ID: 6XMD RELATED DB: PDB REMARK 900 SM PROTEIN VPS45 IN COMPLEX WITH QA SNARE TLG2 (1-310, LOOP REMARK 900 DELETION 201-228) DBREF 6XJL A 1 624 UNP G0S539 G0S539_CHATD 1 624 SEQADV 6XJL HIS A -24 UNP G0S539 EXPRESSION TAG SEQADV 6XJL HIS A -23 UNP G0S539 EXPRESSION TAG SEQADV 6XJL HIS A -22 UNP G0S539 EXPRESSION TAG SEQADV 6XJL HIS A -21 UNP G0S539 EXPRESSION TAG SEQADV 6XJL HIS A -20 UNP G0S539 EXPRESSION TAG SEQADV 6XJL HIS A -19 UNP G0S539 EXPRESSION TAG SEQADV 6XJL HIS A -18 UNP G0S539 EXPRESSION TAG SEQADV 6XJL HIS A -17 UNP G0S539 EXPRESSION TAG SEQADV 6XJL GLY A -16 UNP G0S539 EXPRESSION TAG SEQADV 6XJL SER A -15 UNP G0S539 EXPRESSION TAG SEQADV 6XJL ASP A -14 UNP G0S539 EXPRESSION TAG SEQADV 6XJL TYR A -13 UNP G0S539 EXPRESSION TAG SEQADV 6XJL ASP A -12 UNP G0S539 EXPRESSION TAG SEQADV 6XJL ILE A -11 UNP G0S539 EXPRESSION TAG SEQADV 6XJL PRO A -10 UNP G0S539 EXPRESSION TAG SEQADV 6XJL THR A -9 UNP G0S539 EXPRESSION TAG SEQADV 6XJL THR A -8 UNP G0S539 EXPRESSION TAG SEQADV 6XJL GLU A -7 UNP G0S539 EXPRESSION TAG SEQADV 6XJL ASN A -6 UNP G0S539 EXPRESSION TAG SEQADV 6XJL LEU A -5 UNP G0S539 EXPRESSION TAG SEQADV 6XJL TYR A -4 UNP G0S539 EXPRESSION TAG SEQADV 6XJL PHE A -3 UNP G0S539 EXPRESSION TAG SEQADV 6XJL GLN A -2 UNP G0S539 EXPRESSION TAG SEQADV 6XJL GLY A -1 UNP G0S539 EXPRESSION TAG SEQADV 6XJL SER A 0 UNP G0S539 EXPRESSION TAG SEQRES 1 A 649 HIS HIS HIS HIS HIS HIS HIS HIS GLY SER ASP TYR ASP SEQRES 2 A 649 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY SER MET SEQRES 3 A 649 ASP ILE VAL GLN ALA ALA VAL GLY TYR VAL ASN ARG MET SEQRES 4 A 649 VAL THR ALA GLY GLY GLY ALA SER GLY SER GLY ALA PRO SEQRES 5 A 649 SER ALA LYS MET LYS ILE LEU LEU LEU ASP ARG ASP THR SEQRES 6 A 649 LEU PRO PHE ILE SER THR ALA VAL SER GLN SER THR LEU SEQRES 7 A 649 LEU ASN HIS GLU VAL TYR LEU MET ASP ARG ILE ASP ASN SEQRES 8 A 649 GLN ASN ARG GLU LYS MET ARG HIS LEU ARG CYS LEU CYS SEQRES 9 A 649 PHE LEU ARG PRO THR LEU ASP SER VAL GLY LEU LEU VAL SEQRES 10 A 649 ASP GLU LEU ARG GLU PRO LYS TYR GLY GLU TYR HIS LEU SEQRES 11 A 649 PHE PHE SER ASN VAL VAL LYS LYS SER THR LEU GLU ARG SEQRES 12 A 649 LEU ALA GLU ALA ASP ASP HIS GLU VAL VAL LYS VAL VAL SEQRES 13 A 649 GLN GLU LEU PHE LEU ASP TYR SER VAL ILE ASN PRO ASP SEQRES 14 A 649 LEU PHE SER LEU ASN MET SER LEU PRO THR HIS ARG LEU SEQRES 15 A 649 TRP SER GLY SER PRO ASP MET TRP ASN ALA ASP SER LEU SEQRES 16 A 649 GLN ARG ALA THR GLU GLY ILE ILE ALA VAL LEU LEU SER SEQRES 17 A 649 LEU LYS LYS ARG PRO LEU ILE ARG TYR GLN LYS THR SER SEQRES 18 A 649 GLY LEU ALA ARG ARG LEU ALA HIS GLU VAL ARG THR PHE SEQRES 19 A 649 VAL SER LYS GLU GLU GLN LEU PHE ASP PHE ARG ARG VAL SEQRES 20 A 649 ASP THR PRO PRO ILE LEU LEU ILE LEU ASP ARG ARG GLU SEQRES 21 A 649 ASP PRO VAL THR PRO LEU LEU MET GLN TRP THR TYR GLN SEQRES 22 A 649 ALA MET VAL HIS HIS LEU LEU GLY ILE ASN ASN GLY ARG SEQRES 23 A 649 VAL ASP MET SER SER VAL PRO ASP ILE ARG PRO GLU LEU SEQRES 24 A 649 LYS GLU ILE VAL LEU SER GLN ASP GLN ASP PRO PHE PHE SEQRES 25 A 649 LYS LYS ASN MET TYR LEU ASN PHE GLY ASP LEU GLY SER SEQRES 26 A 649 ASN ILE LYS ASP TYR VAL GLU GLN TYR GLN SER ARG THR SEQRES 27 A 649 LYS SER THR HIS ASP ILE GLU SER ILE ALA ASP MET LYS SEQRES 28 A 649 ARG PHE MET GLU GLU TYR PRO GLU PHE ARG LYS LEU SER SEQRES 29 A 649 GLY ASN VAL SER LYS HIS VAL THR LEU VAL SER GLU LEU SEQRES 30 A 649 SER ARG ARG VAL GLY ALA GLU ASN LEU LEU GLU VAL SER SEQRES 31 A 649 GLU LEU GLU GLN SER ILE ALA CYS ASN ASP ASN HIS SER SEQRES 32 A 649 SER ASP LEU LYS THR LEU GLN SER HIS LEU SER ASN PRO SEQRES 33 A 649 SER ILE PRO PRO GLN ASN LYS LEU ILE LEU VAL ALA LEU SEQRES 34 A 649 TYR ALA LEU ARG TYR ALA LYS HIS PRO SER ASN SER LEU SEQRES 35 A 649 PRO ILE LEU LEU ASP LEU LEU THR ALA ALA ALA GLY VAL SEQRES 36 A 649 PRO ALA ARG GLN VAL ALA LEU ILE PRO LYS LEU LEU THR SEQRES 37 A 649 TYR HIS ARG SER LEU HIS ALA ALA GLN PRO GLY ALA ASP SEQRES 38 A 649 SER SER GLY VAL GLU SER LEU PHE GLU THR THR PRO GLY SEQRES 39 A 649 THR VAL VAL ALA ASN LEU PHE GLY VAL GLY SER SER GLY SEQRES 40 A 649 GLY ARG PHE LYS GLY LEU LYS GLY VAL GLU ASN VAL TYR SEQRES 41 A 649 THR GLN HIS SER PRO LYS MET GLU GLY THR LEU HIS GLN SEQRES 42 A 649 LEU VAL LYS GLY ARG LEU ARG GLU SER GLN PHE PRO PHE SEQRES 43 A 649 VAL ASP THR THR SER ALA GLY PRO GLY ALA SER SER GLY SEQRES 44 A 649 SER THR SER GLY LEU GLY SER VAL THR LYS ASP LYS PRO SEQRES 45 A 649 GLN ASP ILE ILE VAL PHE MET ILE GLY GLY ALA THR TYR SEQRES 46 A 649 GLU GLU ALA LYS LEU VAL ALA GLY ILE ASN ALA SER VAL SEQRES 47 A 649 PRO GLY VAL ARG VAL VAL LEU GLY GLY THR SER VAL VAL SEQRES 48 A 649 ASN ALA LYS GLU PHE LEU ALA GLU VAL GLU ASP ALA VAL SEQRES 49 A 649 ASP GLY TRP GLY GLY LEU ASP LEU SER GLY GLY ILE GLY SEQRES 50 A 649 SER GLY GLY SER GLY PRO GLY SER ALA ARG ARG ARG FORMUL 2 HOH *270(H2 O) HELIX 1 AA1 ASP A 2 VAL A 15 1 14 HELIX 2 AA2 ASP A 39 VAL A 48 1 10 HELIX 3 AA3 SER A 49 HIS A 56 1 8 HELIX 4 AA4 THR A 84 GLU A 97 1 14 HELIX 5 AA5 LYS A 112 ASP A 123 1 12 HELIX 6 AA6 ASN A 166 LYS A 185 1 20 HELIX 7 AA7 SER A 196 GLU A 213 1 18 HELIX 8 AA8 GLU A 214 ASP A 218 5 5 HELIX 9 AA9 ARG A 234 ASP A 236 5 3 HELIX 10 AB1 VAL A 238 LEU A 242 5 5 HELIX 11 AB2 THR A 246 LEU A 255 1 10 HELIX 12 AB3 ARG A 271 LEU A 274 5 4 HELIX 13 AB4 ASP A 284 MET A 291 1 8 HELIX 14 AB5 ASN A 294 LYS A 314 1 21 HELIX 15 AB6 LYS A 337 GLU A 359 1 23 HELIX 16 AB7 ASN A 360 ASN A 374 1 15 HELIX 17 AB8 ASN A 376 LEU A 388 1 13 HELIX 18 AB9 PRO A 394 ALA A 410 1 17 HELIX 19 AC1 SER A 416 ALA A 427 1 12 HELIX 20 AC2 PRO A 431 ALA A 436 1 6 HELIX 21 AC3 ALA A 436 SER A 447 1 12 HELIX 22 AC4 LYS A 489 ASN A 493 5 5 HELIX 23 AC5 PRO A 500 LYS A 511 1 12 HELIX 24 AC6 THR A 559 VAL A 573 1 15 HELIX 25 AC7 ASN A 587 GLY A 603 1 17 SHEET 1 AA1 5 VAL A 58 ARG A 63 0 SHEET 2 AA1 5 LYS A 32 LEU A 36 1 N LEU A 34 O LEU A 60 SHEET 3 AA1 5 MET A 72 LEU A 81 1 O LEU A 78 N LEU A 35 SHEET 4 AA1 5 TYR A 100 PHE A 107 1 O PHE A 106 N CYS A 79 SHEET 5 AA1 5 VAL A 128 GLU A 133 1 O VAL A 130 N LEU A 105 SHEET 1 AA2 6 SER A 139 ASN A 142 0 SHEET 2 AA2 6 LEU A 145 SER A 147 -1 O SER A 147 N SER A 139 SHEET 3 AA2 6 VAL A 576 GLY A 582 1 O LEU A 580 N PHE A 146 SHEET 4 AA2 6 GLN A 548 ILE A 555 1 N VAL A 552 O GLY A 581 SHEET 5 AA2 6 ILE A 227 ASP A 232 1 N LEU A 231 O ILE A 555 SHEET 6 AA2 6 LEU A 189 TYR A 192 1 N LEU A 189 O LEU A 228 SHEET 1 AA3 2 ARG A 261 ASP A 263 0 SHEET 2 AA3 2 GLU A 276 VAL A 278 -1 O ILE A 277 N VAL A 262 CISPEP 1 LEU A 152 PRO A 153 0 1.60 CRYST1 68.489 93.956 102.615 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014601 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010643 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009745 0.00000