data_6XKN # _entry.id 6XKN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.394 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6XKN pdb_00006xkn 10.2210/pdb6xkn/pdb WWPDB D_1000250318 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-12-29 2 'Structure model' 1 1 2023-10-18 3 'Structure model' 2 0 2024-06-19 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' author 'Coordinate replacement' 'Model orientation/position' ;We conducted a structural and functional analysis of the riboswitch and noticed that one of the bases (C83) was modeled in a highly unlikely syn conformation. We chose to correct this conformation using the same dataset already deposited in the PDB. We refined the structure with the new anti-conformation and took the opportunity to improve the geometry and clash score. ; # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Author supporting evidence' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Refinement description' 9 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model 4 3 'Structure model' atom_site 5 3 'Structure model' atom_site_anisotrop 6 3 'Structure model' entity 7 3 'Structure model' ndb_struct_na_base_pair 8 3 'Structure model' ndb_struct_na_base_pair_step 9 3 'Structure model' pdbx_contact_author 10 3 'Structure model' pdbx_entity_instance_feature 11 3 'Structure model' pdbx_entry_details 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_refine_tls 14 3 'Structure model' pdbx_refine_tls_group 15 3 'Structure model' pdbx_validate_close_contact 16 3 'Structure model' pdbx_validate_rmsd_angle 17 3 'Structure model' pdbx_validate_symm_contact 18 3 'Structure model' refine 19 3 'Structure model' refine_hist 20 3 'Structure model' refine_ls_restr 21 3 'Structure model' refine_ls_shell 22 3 'Structure model' software 23 3 'Structure model' struct_conn 24 3 'Structure model' struct_site 25 3 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site_anisotrop.U[1][1]' 2 3 'Structure model' '_atom_site_anisotrop.U[1][2]' 3 3 'Structure model' '_atom_site_anisotrop.U[1][3]' 4 3 'Structure model' '_atom_site_anisotrop.U[2][2]' 5 3 'Structure model' '_atom_site_anisotrop.U[2][3]' 6 3 'Structure model' '_atom_site_anisotrop.U[3][3]' 7 3 'Structure model' '_atom_site_anisotrop.id' 8 3 'Structure model' '_entity.pdbx_number_of_molecules' 9 3 'Structure model' '_pdbx_entry_details.has_ligand_of_interest' 10 3 'Structure model' '_pdbx_validate_close_contact.dist' 11 3 'Structure model' '_refine.B_iso_max' 12 3 'Structure model' '_refine.B_iso_mean' 13 3 'Structure model' '_refine.B_iso_min' 14 3 'Structure model' '_refine.ls_R_factor_R_free' 15 3 'Structure model' '_refine.ls_R_factor_R_work' 16 3 'Structure model' '_refine.ls_R_factor_obs' 17 3 'Structure model' '_refine.ls_number_reflns_R_work' 18 3 'Structure model' '_refine.ls_number_reflns_obs' 19 3 'Structure model' '_refine.ls_percent_reflns_R_free' 20 3 'Structure model' '_refine.ls_percent_reflns_obs' 21 3 'Structure model' '_refine.overall_SU_ML' 22 3 'Structure model' '_refine.pdbx_overall_phase_error' 23 3 'Structure model' '_refine.pdbx_solvent_vdw_probe_radii' 24 3 'Structure model' '_refine_hist.cycle_id' 25 3 'Structure model' '_refine_hist.number_atoms_solvent' 26 3 'Structure model' '_refine_hist.number_atoms_total' 27 3 'Structure model' '_refine_hist.pdbx_B_iso_mean_ligand' 28 3 'Structure model' '_refine_hist.pdbx_B_iso_mean_solvent' 29 3 'Structure model' '_refine_hist.pdbx_number_atoms_ligand' 30 3 'Structure model' '_refine_hist.pdbx_number_residues_total' 31 3 'Structure model' '_refine_ls_restr.dev_ideal' 32 3 'Structure model' '_refine_ls_restr.number' 33 3 'Structure model' '_refine_ls_shell.R_factor_R_free' 34 3 'Structure model' '_refine_ls_shell.R_factor_R_free_error' 35 3 'Structure model' '_refine_ls_shell.R_factor_R_work' 36 3 'Structure model' '_refine_ls_shell.number_reflns_R_free' 37 3 'Structure model' '_refine_ls_shell.number_reflns_R_work' 38 3 'Structure model' '_refine_ls_shell.number_reflns_all' 39 3 'Structure model' '_refine_ls_shell.pdbx_total_number_of_bins_used' 40 3 'Structure model' '_refine_ls_shell.percent_reflns_obs' 41 3 'Structure model' '_software.classification' 42 3 'Structure model' '_software.name' 43 3 'Structure model' '_software.version' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6XKN _pdbx_database_status.recvd_initial_deposition_date 2020-06-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email joseph_wedekind@urmc.rochester.edu _pdbx_contact_author.name_first Joseph _pdbx_contact_author.name_last Wedekind _pdbx_contact_author.name_mi E. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-4269-4229 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Srivastava, K.Y.' 1 0000-0001-9091-9851 'Jenkins, J.L.' 2 0000-0003-2548-3275 'Wedekind, J.E.' 3 0000-0002-4269-4229 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'New insights into Class III PreQ1 metabolite binding' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Srivastava, K.Y.' 1 0000-0001-9091-9851 primary 'Jenkins, J.L.' 2 0000-0003-2548-3275 primary 'Wedekind, J.E.' 3 0000-0002-4269-4229 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Class III PreQ1 riboswitch' 32655.254 1 ? A52G ? ? 2 non-polymer syn 7-DEAZA-7-AMINOMETHYL-GUANINE 179.179 1 ? ? ? ? 3 water nat water 18.015 7 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(GTP)AGCAACUUAGGAUUUUAGGCUCCCCGGCGUGUCUCGAACCAUGCCGGGCCGAACCCAUAGGGCUGGCGGUCCCUG UGCGGUCAAAAUUCAUCCGCCGGAG ; _entity_poly.pdbx_seq_one_letter_code_can ;GAGCAACUUAGGAUUUUAGGCUCCCCGGCGUGUCUCGAACCAUGCCGGGCCGAACCCAUAGGGCUGGCGGUCCCUGUGCG GUCAAAAUUCAUCCGCCGGAG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 7-DEAZA-7-AMINOMETHYL-GUANINE PRF 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 A n 1 3 G n 1 4 C n 1 5 A n 1 6 A n 1 7 C n 1 8 U n 1 9 U n 1 10 A n 1 11 G n 1 12 G n 1 13 A n 1 14 U n 1 15 U n 1 16 U n 1 17 U n 1 18 A n 1 19 G n 1 20 G n 1 21 C n 1 22 U n 1 23 C n 1 24 C n 1 25 C n 1 26 C n 1 27 G n 1 28 G n 1 29 C n 1 30 G n 1 31 U n 1 32 G n 1 33 U n 1 34 C n 1 35 U n 1 36 C n 1 37 G n 1 38 A n 1 39 A n 1 40 C n 1 41 C n 1 42 A n 1 43 U n 1 44 G n 1 45 C n 1 46 C n 1 47 G n 1 48 G n 1 49 G n 1 50 C n 1 51 C n 1 52 G n 1 53 A n 1 54 A n 1 55 C n 1 56 C n 1 57 C n 1 58 A n 1 59 U n 1 60 A n 1 61 G n 1 62 G n 1 63 G n 1 64 C n 1 65 U n 1 66 G n 1 67 G n 1 68 C n 1 69 G n 1 70 G n 1 71 U n 1 72 C n 1 73 C n 1 74 C n 1 75 U n 1 76 G n 1 77 U n 1 78 G n 1 79 C n 1 80 G n 1 81 G n 1 82 U n 1 83 C n 1 84 A n 1 85 A n 1 86 A n 1 87 A n 1 88 U n 1 89 U n 1 90 C n 1 91 A n 1 92 U n 1 93 C n 1 94 C n 1 95 G n 1 96 C n 1 97 C n 1 98 G n 1 99 G n 1 100 A n 1 101 G n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 101 _pdbx_entity_src_syn.organism_scientific 'Faecalibacterium prausnitzii' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 853 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 PRF non-polymer . 7-DEAZA-7-AMINOMETHYL-GUANINE ? 'C7 H9 N5 O' 179.179 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 1 1 GTP GTP A . n A 1 2 A 2 2 2 A A A . n A 1 3 G 3 3 3 G G A . n A 1 4 C 4 4 4 C C A . n A 1 5 A 5 5 5 A A A . n A 1 6 A 6 6 6 A A A . n A 1 7 C 7 7 7 C C A . n A 1 8 U 8 8 8 U U A . n A 1 9 U 9 9 9 U U A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 G 12 12 12 G G A . n A 1 13 A 13 13 13 A A A . n A 1 14 U 14 14 14 U U A . n A 1 15 U 15 15 15 U U A . n A 1 16 U 16 16 16 U U A . n A 1 17 U 17 17 17 U U A . n A 1 18 A 18 18 18 A A A . n A 1 19 G 19 19 19 G G A . n A 1 20 G 20 20 20 G G A . n A 1 21 C 21 21 21 C C A . n A 1 22 U 22 22 22 U U A . n A 1 23 C 23 23 23 C C A . n A 1 24 C 24 24 24 C C A . n A 1 25 C 25 25 25 C C A . n A 1 26 C 26 26 26 C C A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 C 29 29 29 C C A . n A 1 30 G 30 30 30 G G A . n A 1 31 U 31 31 31 U U A . n A 1 32 G 32 32 32 G G A . n A 1 33 U 33 33 33 U U A . n A 1 34 C 34 34 ? ? ? A . n A 1 35 U 35 35 ? ? ? A . n A 1 36 C 36 36 ? ? ? A . n A 1 37 G 37 37 ? ? ? A . n A 1 38 A 38 38 ? ? ? A . n A 1 39 A 39 39 39 A A A . n A 1 40 C 40 40 40 C C A . n A 1 41 C 41 41 41 C C A . n A 1 42 A 42 42 42 A A A . n A 1 43 U 43 43 43 U U A . n A 1 44 G 44 44 44 G G A . n A 1 45 C 45 45 45 C C A . n A 1 46 C 46 46 46 C C A . n A 1 47 G 47 47 47 G G A . n A 1 48 G 48 48 48 G G A . n A 1 49 G 49 49 49 G G A . n A 1 50 C 50 50 50 C C A . n A 1 51 C 51 51 51 C C A . n A 1 52 G 52 52 52 G G A . n A 1 53 A 53 53 53 A A A . n A 1 54 A 54 54 54 A A A . n A 1 55 C 55 55 55 C C A . n A 1 56 C 56 56 56 C C A . n A 1 57 C 57 57 57 C C A . n A 1 58 A 58 58 58 A A A . n A 1 59 U 59 59 59 U U A . n A 1 60 A 60 60 60 A A A . n A 1 61 G 61 61 61 G G A . n A 1 62 G 62 62 62 G G A . n A 1 63 G 63 63 63 G G A . n A 1 64 C 64 64 64 C C A . n A 1 65 U 65 65 65 U U A . n A 1 66 G 66 66 66 G G A . n A 1 67 G 67 67 67 G G A . n A 1 68 C 68 68 68 C C A . n A 1 69 G 69 69 69 G G A . n A 1 70 G 70 70 70 G G A . n A 1 71 U 71 71 71 U U A . n A 1 72 C 72 72 72 C C A . n A 1 73 C 73 73 73 C C A . n A 1 74 C 74 74 74 C C A . n A 1 75 U 75 75 75 U U A . n A 1 76 G 76 76 76 G G A . n A 1 77 U 77 77 77 U U A . n A 1 78 G 78 78 78 G G A . n A 1 79 C 79 79 79 C C A . n A 1 80 G 80 80 80 G G A . n A 1 81 G 81 81 81 G G A . n A 1 82 U 82 82 82 U U A . n A 1 83 C 83 83 83 C C A . n A 1 84 A 84 84 84 A A A . n A 1 85 A 85 85 85 A A A . n A 1 86 A 86 86 86 A A A . n A 1 87 A 87 87 87 A A A . n A 1 88 U 88 88 88 U U A . n A 1 89 U 89 89 89 U U A . n A 1 90 C 90 90 90 C C A . n A 1 91 A 91 91 91 A A A . n A 1 92 U 92 92 92 U U A . n A 1 93 C 93 93 93 C C A . n A 1 94 C 94 94 94 C C A . n A 1 95 G 95 95 95 G G A . n A 1 96 C 96 96 96 C C A . n A 1 97 C 97 97 97 C C A . n A 1 98 G 98 98 98 G G A . n A 1 99 G 99 99 99 G G A . n A 1 100 A 100 100 100 A A A . n A 1 101 G 101 101 101 G G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PRF 1 201 201 PRF PRF A . C 3 HOH 1 301 301 HOH HOH A . C 3 HOH 2 302 302 HOH HOH A . C 3 HOH 3 303 303 HOH HOH A . C 3 HOH 4 304 304 HOH HOH A . C 3 HOH 5 305 305 HOH HOH A . C 3 HOH 6 306 306 HOH HOH A . C 3 HOH 7 307 307 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? v708c 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? v708c 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6XKN _cell.details ? _cell.formula_units_Z ? _cell.length_a 80.137 _cell.length_a_esd ? _cell.length_b 80.137 _cell.length_b_esd ? _cell.length_c 281.457 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 6XKN _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6XKN _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.99 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 69.21 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '85% Tacsimate pH 7.0, 10 mM magnesium acetate, 6 mM cobalt haxammine, 1 mM spermine' _exptl_crystal_grow.pdbx_pH_range 7.0 _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-10-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.6279 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.6279 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_synchrotron_site CHESS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6XKN _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.73 _reflns.d_resolution_low 24.71 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15078 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.035 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.73 _reflns_shell.d_res_low 2.83 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.7 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1473 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 8.3 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.357 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 94.13 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6XKN _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.73 _refine.ls_d_res_low 24.71 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 14702 _refine.ls_number_reflns_R_free 1467 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.26 _refine.ls_percent_reflns_R_free 9.98 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2368 _refine.ls_R_factor_R_free 0.2466 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2357 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model 4RZD _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.15 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.37 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.73 _refine_hist.d_res_low 24.71 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 2075 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2055 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.001 ? 2306 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.468 ? 3589 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.628 ? 1159 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.022 ? 479 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 98 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.73 2.83 . . 156 1280 98.00 . . . . 0.4334 . . . . . . . . . . . 0.4122 'X-RAY DIFFRACTION' 2.83 2.94 . . 140 1293 98.00 . . . . 0.4109 . . . . . . . . . . . 0.4324 'X-RAY DIFFRACTION' 2.94 3.07 . . 136 1293 97.00 . . . . 0.3333 . . . . . . . . . . . 0.3039 'X-RAY DIFFRACTION' 3.07 3.23 . . 143 1245 94.00 . . . . 0.2795 . . . . . . . . . . . 0.2850 'X-RAY DIFFRACTION' 3.23 3.44 . . 135 1278 96.00 . . . . 0.2897 . . . . . . . . . . . 0.2657 'X-RAY DIFFRACTION' 3.44 3.70 . . 153 1273 95.00 . . . . 0.2632 . . . . . . . . . . . 0.2889 'X-RAY DIFFRACTION' 3.70 4.07 . . 139 1334 97.00 . . . . 0.2181 . . . . . . . . . . . 0.2172 'X-RAY DIFFRACTION' 4.07 4.66 . . 143 1355 99.00 . . . . 0.1895 . . . . . . . . . . . 0.2100 'X-RAY DIFFRACTION' 4.66 5.85 . . 155 1392 99.00 . . . . 0.1954 . . . . . . . . . . . 0.2241 'X-RAY DIFFRACTION' 5.85 24.71 . . 167 1492 98.00 . . . . 0.1965 . . . . . . . . . . . 0.2119 # _struct.entry_id 6XKN _struct.title 'Class III PreQ1 riboswitch mutant A52G' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6XKN _struct_keywords.text ;PREQ1, QUEUOSINE, THREE-WAY HELICAL JUNCTION, APTAMER, METABOLITE, TRANSLATIONAL REGULATION, HL(OUT)-TYPE PSEUDOKNOT, RIBOSWITCH, RNA ; _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6XKN _struct_ref.pdbx_db_accession 6XKN _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6XKN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 101 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6XKN _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 101 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 101 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'isothermal titration calorimetry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A A 2 P ? ? A GTP 1 A A 2 1_555 ? ? ? ? ? ? ? 1.591 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A C 23 N3 ? ? A GTP 1 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A C 23 O2 ? ? A GTP 1 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A C 23 N4 ? ? A GTP 1 A C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 A U 22 N3 ? ? A A 2 A U 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 A U 22 O4 ? ? A A 2 A U 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 21 N3 ? ? A G 3 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 21 O2 ? ? A G 3 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 21 N4 ? ? A G 3 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 20 N1 ? ? A C 4 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 20 O6 ? ? A C 4 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 20 N2 ? ? A C 4 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N1 ? ? ? 1_555 A G 19 N1 ? ? A A 5 A G 19 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog13 hydrog ? ? A A 5 N6 ? ? ? 1_555 A G 19 O6 ? ? A A 5 A G 19 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog14 hydrog ? ? A A 6 N1 ? ? ? 1_555 A A 18 N6 ? ? A A 6 A A 18 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog15 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 85 N7 ? ? A U 8 A A 85 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog16 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 85 N6 ? ? A U 8 A A 85 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog17 hydrog ? ? A U 9 N3 ? ? ? 1_555 A A 86 N7 ? ? A U 9 A A 86 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog18 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 86 N6 ? ? A U 9 A A 86 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog19 hydrog ? ? A A 10 N1 ? ? ? 1_555 A A 87 N6 ? ? A A 10 A A 87 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog20 hydrog ? ? A A 10 N6 ? ? ? 1_555 A A 87 N7 ? ? A A 10 A A 87 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog21 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 90 N3 ? ? A G 11 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 90 O2 ? ? A G 11 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 90 N4 ? ? A G 11 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 12 N1 ? ? ? 1_555 A U 89 O2 ? ? A G 12 A U 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? A G 12 O6 ? ? ? 1_555 A U 89 N3 ? ? A G 12 A U 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog26 hydrog ? ? A A 13 N1 ? ? ? 1_555 A U 88 N3 ? ? A A 13 A U 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A A 13 N6 ? ? ? 1_555 A U 88 O4 ? ? A A 13 A U 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A U 14 N3 ? ? ? 1_555 A A 87 N1 ? ? A U 14 A A 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A U 14 O4 ? ? ? 1_555 A A 87 N6 ? ? A U 14 A A 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 15 N3 ? ? ? 1_555 A A 86 N1 ? ? A U 15 A A 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 15 O4 ? ? ? 1_555 A A 86 N6 ? ? A U 15 A A 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 85 N1 ? ? A U 16 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 85 N6 ? ? A U 16 A A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 49 N1 ? ? A C 24 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 49 O6 ? ? A C 24 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 49 N2 ? ? A C 24 A G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 25 N3 ? ? ? 1_555 A G 48 N1 ? ? A C 25 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 25 N4 ? ? ? 1_555 A G 48 O6 ? ? A C 25 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 25 O2 ? ? ? 1_555 A G 48 N2 ? ? A C 25 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 26 N3 ? ? ? 1_555 A G 47 N1 ? ? A C 26 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 26 N4 ? ? ? 1_555 A G 47 O6 ? ? A C 26 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 26 O2 ? ? ? 1_555 A G 47 N2 ? ? A C 26 A G 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 46 N3 ? ? A G 27 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 46 O2 ? ? A G 27 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 46 N4 ? ? A G 27 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 45 N3 ? ? A G 28 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 45 O2 ? ? A G 28 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 45 N4 ? ? A G 28 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 29 N3 ? ? ? 1_555 A G 44 N1 ? ? A C 29 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 29 N4 ? ? ? 1_555 A G 44 O6 ? ? A C 29 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 29 O2 ? ? ? 1_555 A G 44 N2 ? ? A C 29 A G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 30 N1 ? ? ? 1_555 A U 43 O2 ? ? A G 30 A U 43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog53 hydrog ? ? A G 30 O6 ? ? ? 1_555 A U 43 N3 ? ? A G 30 A U 43 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog54 hydrog ? ? A U 31 N3 ? ? ? 1_555 A A 42 N1 ? ? A U 31 A A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A U 31 O4 ? ? ? 1_555 A A 42 N6 ? ? A U 31 A A 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 41 N3 ? ? A G 32 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 41 O2 ? ? A G 32 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 41 N4 ? ? A G 32 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A U 33 O4 ? ? ? 1_555 A C 40 N4 ? ? A U 33 A C 40 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog60 hydrog ? ? A A 53 N6 ? ? ? 1_555 A C 83 O2 ? ? A A 53 A C 83 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog61 hydrog ? ? A A 54 N6 ? ? ? 1_555 A U 82 O2 ? ? A A 54 A U 82 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog62 hydrog ? ? A C 55 N3 ? ? ? 1_555 A G 81 N1 ? ? A C 55 A G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 55 N4 ? ? ? 1_555 A G 81 O6 ? ? A C 55 A G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 55 O2 ? ? ? 1_555 A G 81 N2 ? ? A C 55 A G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 56 N3 ? ? ? 1_555 A G 80 N1 ? ? A C 56 A G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 56 N4 ? ? ? 1_555 A G 80 O6 ? ? A C 56 A G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 56 O2 ? ? ? 1_555 A G 80 N2 ? ? A C 56 A G 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 57 N3 ? ? ? 1_555 A G 78 N1 ? ? A C 57 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 57 N4 ? ? ? 1_555 A G 78 O6 ? ? A C 57 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 57 O2 ? ? ? 1_555 A G 78 N2 ? ? A C 57 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A A 58 N1 ? ? ? 1_555 A U 77 N3 ? ? A A 58 A U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A A 58 N6 ? ? ? 1_555 A U 77 O4 ? ? A A 58 A U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A U 59 N3 ? ? ? 1_555 A G 76 O6 ? ? A U 59 A G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog74 hydrog ? ? A U 59 O2 ? ? ? 1_555 A G 76 N1 ? ? A U 59 A G 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog75 hydrog ? ? A A 60 N1 ? ? ? 1_555 A U 75 N3 ? ? A A 60 A U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A A 60 N6 ? ? ? 1_555 A U 75 O4 ? ? A A 60 A U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 61 N1 ? ? ? 1_555 A C 74 N3 ? ? A G 61 A C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 61 N2 ? ? ? 1_555 A C 74 O2 ? ? A G 61 A C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A G 61 O6 ? ? ? 1_555 A C 74 N4 ? ? A G 61 A C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A G 62 N1 ? ? ? 1_555 A C 73 N3 ? ? A G 62 A C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A G 62 N2 ? ? ? 1_555 A C 73 O2 ? ? A G 62 A C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 62 O6 ? ? ? 1_555 A C 73 N4 ? ? A G 62 A C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 63 N1 ? ? ? 1_555 A C 72 N3 ? ? A G 63 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 63 N2 ? ? ? 1_555 A C 72 O2 ? ? A G 63 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 63 O6 ? ? ? 1_555 A C 72 N4 ? ? A G 63 A C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 H21 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 G _pdbx_validate_close_contact.auth_seq_id_1 32 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 C _pdbx_validate_close_contact.auth_seq_id_2 41 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.59 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 "O2'" A C 46 ? ? 1_555 "O2'" A G 99 ? ? 5_565 1.93 2 1 "O2'" A C 72 ? ? 1_555 N1 A A 91 ? ? 7_555 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GTP _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "O3'" _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 GTP _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 P _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 A _pdbx_validate_rmsd_angle.auth_seq_id_3 2 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 100.80 _pdbx_validate_rmsd_angle.angle_target_value 119.70 _pdbx_validate_rmsd_angle.angle_deviation -18.90 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.20 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 33.9850 31.5316 115.0622 1.1498 ? 0.0885 ? 0.0459 ? 0.7270 ? 0.0604 ? 0.3720 ? 6.0632 ? -0.3251 ? 2.8324 ? 2.6221 ? -1.1785 ? 5.8245 ? 0.1968 ? 0.0133 ? 0.3256 ? -0.0407 ? 0.1359 ? -0.0548 ? -0.4477 ? 0.2117 ? -0.1266 ? 2 'X-RAY DIFFRACTION' ? refined 33.4686 31.2465 111.5749 1.0605 ? 0.1443 ? 0.0643 ? 1.0206 ? -0.0524 ? 0.3805 ? 1.7286 ? 0.5524 ? 3.3282 ? 1.5089 ? -0.3858 ? 7.8869 ? -0.1190 ? 0.0004 ? 0.4722 ? -0.0559 ? 0.6783 ? 0.2759 ? -0.1163 ? 0.6318 ? -0.2624 ? 3 'X-RAY DIFFRACTION' ? refined 25.2776 31.5537 140.4580 1.2643 ? -0.0505 ? 0.0441 ? 1.4450 ? 0.0722 ? 0.6118 ? 9.1029 ? -1.2745 ? -2.3230 ? 6.3492 ? -4.2572 ? 5.1275 ? 0.9377 ? -1.3830 ? -0.0377 ? 0.6807 ? 1.1502 ? 1.1883 ? -0.0009 ? -1.3042 ? -1.9069 ? 4 'X-RAY DIFFRACTION' ? refined 28.5043 22.6563 155.1274 2.0094 ? 0.1325 ? -0.0868 ? 2.0347 ? -0.0419 ? 1.0245 ? 5.2145 ? 4.6882 ? 3.3213 ? 4.5240 ? 2.5467 ? 2.6605 ? 1.0658 ? 0.5438 ? -1.8059 ? 2.1235 ? 0.9973 ? -1.4175 ? -0.4070 ? 0.1067 ? -2.1208 ? 5 'X-RAY DIFFRACTION' ? refined 27.8589 27.8882 146.6809 1.3130 ? 0.1833 ? -0.0257 ? 2.0785 ? -0.1059 ? 0.8944 ? 7.2969 ? 1.6694 ? 3.6856 ? 3.0819 ? -2.4649 ? 5.9184 ? -1.0757 ? -1.2688 ? 1.1428 ? 0.7739 ? 1.5238 ? 0.7228 ? 0.2117 ? -1.0884 ? -0.6101 ? 6 'X-RAY DIFFRACTION' ? refined 21.5455 33.7719 129.2637 1.4262 ? 0.1743 ? -0.0067 ? 1.3351 ? 0.0390 ? 0.5748 ? 3.7173 ? 1.6189 ? -3.0449 ? 5.5061 ? -3.4673 ? 9.1515 ? 1.2310 ? -0.0267 ? -0.5127 ? 0.7737 ? -0.1951 ? 0.8138 ? 0.2958 ? -0.2178 ? -0.6224 ? 7 'X-RAY DIFFRACTION' ? refined 16.9527 34.8619 109.8776 1.2947 ? 0.2196 ? -0.0289 ? 1.2034 ? 0.0233 ? 0.4115 ? 2.4930 ? -0.8324 ? -0.3184 ? 8.9533 ? 1.3821 ? 1.2721 ? 0.7172 ? -0.8357 ? -1.0961 ? -0.1212 ? -0.9302 ? 0.3424 ? -0.2728 ? 0.0572 ? 0.4141 ? 8 'X-RAY DIFFRACTION' ? refined 6.3305 48.4296 109.5258 0.9735 ? 0.1125 ? -0.0231 ? 0.5804 ? -0.0244 ? 0.4456 ? 1.6943 ? -0.8898 ? 0.9252 ? 0.9222 ? -0.5899 ? 3.0703 ? -0.1876 ? 0.2584 ? 0.2670 ? -0.9793 ? -0.0144 ? 0.5408 ? -0.5803 ? -0.6498 ? 0.1324 ? 9 'X-RAY DIFFRACTION' ? refined -0.8419 54.9297 101.0562 1.1097 ? 0.2240 ? -0.0957 ? 0.7724 ? -0.0161 ? 0.6223 ? 4.4639 ? 0.9667 ? 5.1566 ? 3.2811 ? 1.6448 ? 8.1725 ? -1.0678 ? -0.3690 ? 0.9093 ? 0.1835 ? 0.4449 ? 0.7709 ? -1.1960 ? -0.4569 ? 0.5314 ? 10 'X-RAY DIFFRACTION' ? refined 12.4870 43.9430 112.5179 1.1478 ? 0.3824 ? -0.0590 ? 0.7615 ? -0.1724 ? 0.0573 ? 9.1178 ? 0.1069 ? 0.8468 ? 2.5058 ? -3.1100 ? 6.9588 ? -0.1154 ? 0.1929 ? -1.2977 ? 0.9062 ? 0.4175 ? 0.1847 ? 0.2153 ? 1.1206 ? 0.0921 ? 11 'X-RAY DIFFRACTION' ? refined 9.9472 29.1100 111.7183 1.3382 ? 0.2746 ? 0.1926 ? 0.8433 ? 0.3149 ? 1.2599 ? 3.0737 ? -0.3905 ? 0.6824 ? 7.8650 ? 1.8596 ? 7.8003 ? 0.0864 ? -0.7538 ? -0.1996 ? 1.9392 ? 1.1061 ? -0.2024 ? 0.8309 ? -0.7609 ? -0.9569 ? 12 'X-RAY DIFFRACTION' ? refined 34.0674 35.0194 99.0050 1.1891 ? 0.0649 ? -0.0140 ? 1.0938 ? 0.0576 ? 0.4007 ? 8.9252 ? 0.8659 ? -6.4494 ? 1.7338 ? -1.1376 ? 5.7064 ? 0.8322 ? 0.2766 ? 0.8243 ? 0.2606 ? -0.2519 ? 0.4725 ? -1.2979 ? 0.4995 ? -0.4725 ? 13 'X-RAY DIFFRACTION' ? refined 61.1656 21.8984 93.8485 1.1080 ? -0.0340 ? -0.1701 ? 1.9895 ? 0.3093 ? 1.1091 ? 7.8299 ? -3.0600 ? 2.3200 ? 2.7855 ? -0.3781 ? 0.9345 ? -1.4825 ? -0.6450 ? 0.5866 ? 0.7178 ? 0.4200 ? -1.3519 ? -0.0585 ? 3.3221 ? 0.8608 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 10 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 11 through 22 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 23 through 30 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 31 through 33 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 39 through 46 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 47 through 51 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 52 through 56 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 57 through 63 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 64 through 72 ) ; 10 'X-RAY DIFFRACTION' 10 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 73 through 79 ) ; 11 'X-RAY DIFFRACTION' 11 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 80 through 83 ) ; 12 'X-RAY DIFFRACTION' 12 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 84 through 94 ) ; 13 'X-RAY DIFFRACTION' 13 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 95 through 101 ) ; # _pdbx_entry_details.entry_id 6XKN _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A C 34 ? A C 34 2 1 Y 1 A U 35 ? A U 35 3 1 Y 1 A C 36 ? A C 36 4 1 Y 1 A G 37 ? A G 37 5 1 Y 1 A A 38 ? A A 38 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 GTP PG P N N 111 GTP O1G O N N 112 GTP O2G O N N 113 GTP O3G O N N 114 GTP O3B O N N 115 GTP PB P N N 116 GTP O1B O N N 117 GTP O2B O N N 118 GTP O3A O N N 119 GTP PA P N N 120 GTP O1A O N N 121 GTP O2A O N N 122 GTP "O5'" O N N 123 GTP "C5'" C N N 124 GTP "C4'" C N R 125 GTP "O4'" O N N 126 GTP "C3'" C N S 127 GTP "O3'" O N N 128 GTP "C2'" C N R 129 GTP "O2'" O N N 130 GTP "C1'" C N R 131 GTP N9 N Y N 132 GTP C8 C Y N 133 GTP N7 N Y N 134 GTP C5 C Y N 135 GTP C6 C N N 136 GTP O6 O N N 137 GTP N1 N N N 138 GTP C2 C N N 139 GTP N2 N N N 140 GTP N3 N N N 141 GTP C4 C Y N 142 GTP HOG2 H N N 143 GTP HOG3 H N N 144 GTP HOB2 H N N 145 GTP HOA2 H N N 146 GTP "H5'" H N N 147 GTP "H5''" H N N 148 GTP "H4'" H N N 149 GTP "H3'" H N N 150 GTP "HO3'" H N N 151 GTP "H2'" H N N 152 GTP "HO2'" H N N 153 GTP "H1'" H N N 154 GTP H8 H N N 155 GTP HN1 H N N 156 GTP HN21 H N N 157 GTP HN22 H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 PRF N1 N N N 162 PRF C2 C N N 163 PRF N3 N N N 164 PRF C4 C Y N 165 PRF C5 C Y N 166 PRF C6 C N N 167 PRF O6 O N N 168 PRF C7 C Y N 169 PRF C10 C N N 170 PRF N11 N N N 171 PRF C8 C Y N 172 PRF N9 N Y N 173 PRF N2 N N N 174 PRF H91 H N N 175 PRF H101 H N N 176 PRF H102 H N N 177 PRF H111 H N N 178 PRF H112 H N N 179 PRF H81 H N N 180 PRF HN91 H N N 181 PRF HN21 H N N 182 PRF HN22 H N N 183 U OP3 O N N 184 U P P N N 185 U OP1 O N N 186 U OP2 O N N 187 U "O5'" O N N 188 U "C5'" C N N 189 U "C4'" C N R 190 U "O4'" O N N 191 U "C3'" C N S 192 U "O3'" O N N 193 U "C2'" C N R 194 U "O2'" O N N 195 U "C1'" C N R 196 U N1 N N N 197 U C2 C N N 198 U O2 O N N 199 U N3 N N N 200 U C4 C N N 201 U O4 O N N 202 U C5 C N N 203 U C6 C N N 204 U HOP3 H N N 205 U HOP2 H N N 206 U "H5'" H N N 207 U "H5''" H N N 208 U "H4'" H N N 209 U "H3'" H N N 210 U "HO3'" H N N 211 U "H2'" H N N 212 U "HO2'" H N N 213 U "H1'" H N N 214 U H3 H N N 215 U H5 H N N 216 U H6 H N N 217 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 GTP PG O1G doub N N 116 GTP PG O2G sing N N 117 GTP PG O3G sing N N 118 GTP PG O3B sing N N 119 GTP O2G HOG2 sing N N 120 GTP O3G HOG3 sing N N 121 GTP O3B PB sing N N 122 GTP PB O1B doub N N 123 GTP PB O2B sing N N 124 GTP PB O3A sing N N 125 GTP O2B HOB2 sing N N 126 GTP O3A PA sing N N 127 GTP PA O1A doub N N 128 GTP PA O2A sing N N 129 GTP PA "O5'" sing N N 130 GTP O2A HOA2 sing N N 131 GTP "O5'" "C5'" sing N N 132 GTP "C5'" "C4'" sing N N 133 GTP "C5'" "H5'" sing N N 134 GTP "C5'" "H5''" sing N N 135 GTP "C4'" "O4'" sing N N 136 GTP "C4'" "C3'" sing N N 137 GTP "C4'" "H4'" sing N N 138 GTP "O4'" "C1'" sing N N 139 GTP "C3'" "O3'" sing N N 140 GTP "C3'" "C2'" sing N N 141 GTP "C3'" "H3'" sing N N 142 GTP "O3'" "HO3'" sing N N 143 GTP "C2'" "O2'" sing N N 144 GTP "C2'" "C1'" sing N N 145 GTP "C2'" "H2'" sing N N 146 GTP "O2'" "HO2'" sing N N 147 GTP "C1'" N9 sing N N 148 GTP "C1'" "H1'" sing N N 149 GTP N9 C8 sing Y N 150 GTP N9 C4 sing Y N 151 GTP C8 N7 doub Y N 152 GTP C8 H8 sing N N 153 GTP N7 C5 sing Y N 154 GTP C5 C6 sing N N 155 GTP C5 C4 doub Y N 156 GTP C6 O6 doub N N 157 GTP C6 N1 sing N N 158 GTP N1 C2 sing N N 159 GTP N1 HN1 sing N N 160 GTP C2 N2 sing N N 161 GTP C2 N3 doub N N 162 GTP N2 HN21 sing N N 163 GTP N2 HN22 sing N N 164 GTP N3 C4 sing N N 165 HOH O H1 sing N N 166 HOH O H2 sing N N 167 PRF N1 C2 sing N N 168 PRF N1 C6 sing N N 169 PRF N1 H91 sing N N 170 PRF C2 N3 doub N N 171 PRF C2 N2 sing N N 172 PRF N3 C4 sing N N 173 PRF C4 C5 doub Y N 174 PRF C4 N9 sing Y N 175 PRF C5 C6 sing N N 176 PRF C5 C7 sing Y N 177 PRF C6 O6 doub N N 178 PRF C7 C10 sing N N 179 PRF C7 C8 doub Y N 180 PRF C10 N11 sing N N 181 PRF C10 H101 sing N N 182 PRF C10 H102 sing N N 183 PRF N11 H111 sing N N 184 PRF N11 H112 sing N N 185 PRF C8 N9 sing Y N 186 PRF C8 H81 sing N N 187 PRF N9 HN91 sing N N 188 PRF N2 HN21 sing N N 189 PRF N2 HN22 sing N N 190 U OP3 P sing N N 191 U OP3 HOP3 sing N N 192 U P OP1 doub N N 193 U P OP2 sing N N 194 U P "O5'" sing N N 195 U OP2 HOP2 sing N N 196 U "O5'" "C5'" sing N N 197 U "C5'" "C4'" sing N N 198 U "C5'" "H5'" sing N N 199 U "C5'" "H5''" sing N N 200 U "C4'" "O4'" sing N N 201 U "C4'" "C3'" sing N N 202 U "C4'" "H4'" sing N N 203 U "O4'" "C1'" sing N N 204 U "C3'" "O3'" sing N N 205 U "C3'" "C2'" sing N N 206 U "C3'" "H3'" sing N N 207 U "O3'" "HO3'" sing N N 208 U "C2'" "O2'" sing N N 209 U "C2'" "C1'" sing N N 210 U "C2'" "H2'" sing N N 211 U "O2'" "HO2'" sing N N 212 U "C1'" N1 sing N N 213 U "C1'" "H1'" sing N N 214 U N1 C2 sing N N 215 U N1 C6 sing N N 216 U C2 O2 doub N N 217 U C2 N3 sing N N 218 U N3 C4 sing N N 219 U N3 H3 sing N N 220 U C4 O4 doub N N 221 U C4 C5 sing N N 222 U C5 C6 doub N N 223 U C5 H5 sing N N 224 U C6 H6 sing N N 225 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6XKN 'double helix' 6XKN 'a-form double helix' 6XKN 'hairpin loop' 6XKN 'bulge loop' 6XKN 'mismatched base pair' 6XKN 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 11 1_555 A C 90 1_555 -0.817 -0.262 0.697 6.667 -11.901 -6.841 1 A_G11:C90_A A 11 ? A 90 ? 19 1 1 A G 12 1_555 A U 89 1_555 -1.561 -0.230 0.294 4.157 -14.221 -3.717 2 A_G12:U89_A A 12 ? A 89 ? 28 1 1 A A 13 1_555 A U 88 1_555 -0.508 -0.031 0.090 2.912 -15.881 4.598 3 A_A13:U88_A A 13 ? A 88 ? 20 1 1 A U 14 1_555 A A 87 1_555 0.262 -0.176 -0.381 11.259 -16.046 -1.346 4 A_U14:A87_A A 14 ? A 87 ? 20 1 1 A U 15 1_555 A A 86 1_555 0.242 -0.144 0.152 4.571 -2.048 9.066 5 A_U15:A86_A A 15 ? A 86 ? 20 1 1 A U 16 1_555 A A 85 1_555 -0.070 -0.129 -0.049 2.907 0.492 5.776 6 A_U16:A85_A A 16 ? A 85 ? 20 1 1 A A 6 1_555 A A 18 1_555 2.458 2.344 0.117 -17.720 -1.721 -130.839 7 A_A6:A18_A A 6 ? A 18 ? ? ? 1 A A 5 1_555 A G 19 1_555 0.131 1.543 -0.074 -5.091 -13.562 -19.072 8 A_A5:G19_A A 5 ? A 19 ? 8 1 1 A G 20 1_555 A C 4 1_555 -0.094 -0.247 0.495 6.043 -12.912 -4.841 9 A_G20:C4_A A 20 ? A 4 ? 19 1 1 A C 21 1_555 A G 3 1_555 -0.056 0.006 0.221 -0.531 -14.312 2.418 10 A_C21:G3_A A 21 ? A 3 ? 19 1 1 A U 22 1_555 A A 2 1_555 -0.121 0.016 0.460 2.516 -5.605 1.829 11 A_U22:A2_A A 22 ? A 2 ? 20 1 1 A C 23 1_555 A GTP 1 1_555 0.198 -0.100 -0.185 11.880 -5.272 0.636 12 A_C23:GTP1_A A 23 ? A 1 ? 19 1 1 A C 24 1_555 A G 49 1_555 0.091 -0.176 0.514 4.937 -7.268 2.689 13 A_C24:G49_A A 24 ? A 49 ? 19 1 1 A C 25 1_555 A G 48 1_555 0.185 -0.298 0.026 10.893 -16.248 -0.902 14 A_C25:G48_A A 25 ? A 48 ? 19 1 1 A C 26 1_555 A G 47 1_555 -0.354 -0.016 0.241 3.651 -12.486 4.839 15 A_C26:G47_A A 26 ? A 47 ? 19 1 1 A G 27 1_555 A C 46 1_555 -0.345 -0.319 0.059 -4.518 -12.858 0.846 16 A_G27:C46_A A 27 ? A 46 ? 19 1 1 A G 28 1_555 A C 45 1_555 0.552 0.260 -0.046 -7.771 -16.823 3.169 17 A_G28:C45_A A 28 ? A 45 ? 19 1 1 A C 29 1_555 A G 44 1_555 -0.140 0.062 -0.125 -0.768 -11.518 -4.091 18 A_C29:G44_A A 29 ? A 44 ? 19 1 1 A G 30 1_555 A U 43 1_555 -1.484 -0.095 0.241 -3.002 -17.194 2.349 19 A_G30:U43_A A 30 ? A 43 ? 28 1 1 A U 31 1_555 A A 42 1_555 0.599 -0.238 0.663 -5.396 -19.651 5.941 20 A_U31:A42_A A 31 ? A 42 ? 20 1 1 A G 32 1_555 A C 41 1_555 -0.609 -0.291 0.251 -3.901 -15.384 6.305 21 A_G32:C41_A A 32 ? A 41 ? 19 1 1 A U 33 1_555 A C 40 1_555 -0.753 0.863 -1.584 21.711 -12.891 -37.618 22 A_U33:C40_A A 33 ? A 40 ? ? ? 1 A A 53 1_555 A C 83 1_555 -4.090 -1.024 -0.092 10.548 -4.500 -78.234 23 A_A53:C83_A A 53 ? A 83 ? ? 2 1 A A 54 1_555 A U 82 1_555 -3.754 -0.443 -0.085 11.405 -7.809 1.773 24 A_A54:U82_A A 54 ? A 82 ? ? ? 1 A C 55 1_555 A G 81 1_555 -0.098 0.001 0.138 15.242 -15.181 3.656 25 A_C55:G81_A A 55 ? A 81 ? 19 1 1 A C 56 1_555 A G 80 1_555 0.498 -0.145 -0.172 9.458 -9.496 0.319 26 A_C56:G80_A A 56 ? A 80 ? 19 1 1 A C 57 1_555 A G 78 1_555 0.210 -0.258 -0.251 3.933 -7.193 -0.994 27 A_C57:G78_A A 57 ? A 78 ? 19 1 1 A A 58 1_555 A U 77 1_555 0.224 -0.218 -0.137 2.402 -13.557 -1.843 28 A_A58:U77_A A 58 ? A 77 ? 20 1 1 A U 59 1_555 A G 76 1_555 2.435 -0.788 0.059 1.298 -12.463 0.486 29 A_U59:G76_A A 59 ? A 76 ? 28 1 1 A A 60 1_555 A U 75 1_555 -0.655 -0.246 -0.406 -7.741 -7.535 8.832 30 A_A60:U75_A A 60 ? A 75 ? 20 1 1 A G 61 1_555 A C 74 1_555 -0.229 -0.201 -0.540 -6.018 -4.581 0.693 31 A_G61:C74_A A 61 ? A 74 ? 19 1 1 A G 62 1_555 A C 73 1_555 0.180 -0.093 -0.605 -16.014 -17.328 3.771 32 A_G62:C73_A A 62 ? A 73 ? 19 1 1 A G 63 1_555 A C 72 1_555 -0.267 -0.097 -0.364 -17.477 -11.701 -1.200 33 A_G63:C72_A A 63 ? A 72 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 11 1_555 A C 90 1_555 A G 12 1_555 A U 89 1_555 -0.309 -1.725 2.985 -2.163 8.124 37.710 -3.474 0.238 2.585 12.381 3.297 38.602 1 AA_G11G12:U89C90_AA A 11 ? A 90 ? A 12 ? A 89 ? 1 A G 12 1_555 A U 89 1_555 A A 13 1_555 A U 88 1_555 0.159 -1.202 3.258 -1.479 6.209 36.073 -2.736 -0.449 3.008 9.931 2.365 36.615 2 AA_G12A13:U88U89_AA A 12 ? A 89 ? A 13 ? A 88 ? 1 A A 13 1_555 A U 88 1_555 A U 14 1_555 A A 87 1_555 -0.358 -1.300 3.032 2.601 -0.228 34.864 -2.132 0.959 3.007 -0.380 -4.334 34.958 3 AA_A13U14:A87U88_AA A 13 ? A 88 ? A 14 ? A 87 ? 1 A U 14 1_555 A A 87 1_555 A U 15 1_555 A A 86 1_555 1.077 -2.128 3.404 -3.495 7.434 29.305 -5.461 -2.713 2.653 14.343 6.743 30.411 4 AA_U14U15:A86A87_AA A 14 ? A 87 ? A 15 ? A 86 ? 1 A U 15 1_555 A A 86 1_555 A U 16 1_555 A A 85 1_555 -0.421 -2.442 3.145 -0.437 4.572 28.070 -5.918 0.767 2.727 9.347 0.894 28.436 5 AA_U15U16:A85A86_AA A 15 ? A 86 ? A 16 ? A 85 ? 1 A U 16 1_555 A A 85 1_555 A A 6 1_555 A A 18 1_555 1.823 7.239 -0.024 154.625 57.629 -61.980 -3.280 -0.055 -3.636 -30.078 80.703 -167.164 6 AA_U16A6:A18A85_AA A 16 ? A 85 ? A 6 ? A 18 ? 1 A A 6 1_555 A A 18 1_555 A A 5 1_555 A G 19 1_555 0.255 1.833 -3.081 -7.502 -4.863 -87.343 -1.420 0.334 -2.973 3.514 -5.420 -87.708 7 AA_A6A5:G19A18_AA A 6 ? A 18 ? A 5 ? A 19 ? 1 A A 5 1_555 A G 19 1_555 A G 20 1_555 A C 4 1_555 0.816 -3.429 -0.809 164.424 -45.412 77.766 -1.718 -0.408 0.812 -23.172 -83.898 172.670 8 AA_A5G20:C4G19_AA A 5 ? A 19 ? A 20 ? A 4 ? 1 A G 20 1_555 A C 4 1_555 A C 21 1_555 A G 3 1_555 0.667 -2.071 3.377 1.299 3.409 36.337 -3.780 -0.883 3.197 5.450 -2.076 36.514 9 AA_G20C21:G3C4_AA A 20 ? A 4 ? A 21 ? A 3 ? 1 A C 21 1_555 A G 3 1_555 A U 22 1_555 A A 2 1_555 -0.769 -2.357 3.119 -5.513 4.051 25.653 -6.122 0.332 2.820 8.922 12.144 26.535 10 AA_C21U22:A2G3_AA A 21 ? A 3 ? A 22 ? A 2 ? 1 A U 22 1_555 A A 2 1_555 A C 23 1_555 A GTP 1 1_555 0.530 -2.140 2.971 1.922 -0.678 29.658 -4.041 -0.662 3.046 -1.322 -3.749 29.726 11 AA_U22C23:GTP1A2_AA A 22 ? A 2 ? A 23 ? A 1 ? 1 A C 23 1_555 A GTP 1 1_555 A C 24 1_555 A G 49 1_555 0.453 -2.773 3.379 -8.266 6.762 35.482 -5.227 -1.763 2.656 10.798 13.200 37.004 12 AA_C23C24:G49GTP1_AA A 23 ? A 1 ? A 24 ? A 49 ? 1 A C 24 1_555 A G 49 1_555 A C 25 1_555 A G 48 1_555 -0.316 -1.850 3.050 -0.442 -0.172 35.274 -3.028 0.461 3.063 -0.283 0.730 35.277 13 AA_C24C25:G48G49_AA A 24 ? A 49 ? A 25 ? A 48 ? 1 A C 25 1_555 A G 48 1_555 A C 26 1_555 A G 47 1_555 -0.465 -2.308 3.352 -5.388 7.353 24.437 -7.012 -0.355 2.600 16.649 12.199 26.058 14 AA_C25C26:G47G48_AA A 25 ? A 48 ? A 26 ? A 47 ? 1 A C 26 1_555 A G 47 1_555 A G 27 1_555 A C 46 1_555 -0.537 -1.540 3.407 -1.213 6.702 30.296 -4.160 0.772 3.024 12.623 2.285 31.034 15 AA_C26G27:C46G47_AA A 26 ? A 47 ? A 27 ? A 46 ? 1 A G 27 1_555 A C 46 1_555 A G 28 1_555 A C 45 1_555 0.066 -1.852 3.375 -1.503 5.137 35.541 -3.730 -0.320 3.081 8.357 2.445 35.929 16 AA_G27G28:C45C46_AA A 27 ? A 46 ? A 28 ? A 45 ? 1 A G 28 1_555 A C 45 1_555 A C 29 1_555 A G 44 1_555 -0.706 -1.638 2.957 -0.314 2.056 28.640 -3.713 1.361 2.842 4.150 0.634 28.714 17 AA_G28C29:G44C45_AA A 28 ? A 45 ? A 29 ? A 44 ? 1 A C 29 1_555 A G 44 1_555 A G 30 1_555 A U 43 1_555 0.762 -1.647 2.979 -2.817 16.891 30.976 -4.671 -1.583 1.796 29.014 4.838 35.292 18 AA_C29G30:U43G44_AA A 29 ? A 44 ? A 30 ? A 43 ? 1 A G 30 1_555 A U 43 1_555 A U 31 1_555 A A 42 1_555 -0.086 -1.078 3.358 -2.997 2.711 40.629 -1.848 -0.213 3.280 3.893 4.304 40.821 19 AA_G30U31:A42U43_AA A 30 ? A 43 ? A 31 ? A 42 ? 1 A U 31 1_555 A A 42 1_555 A G 32 1_555 A C 41 1_555 -0.005 -1.777 2.879 5.193 11.231 27.792 -5.151 0.823 1.994 22.050 -10.195 30.373 20 AA_U31G32:C41A42_AA A 31 ? A 42 ? A 32 ? A 41 ? 1 A G 32 1_555 A C 41 1_555 A U 33 1_555 A C 40 1_555 -2.766 -0.633 2.793 12.061 10.093 27.830 -2.361 6.479 1.223 19.169 -22.907 31.890 21 AA_G32U33:C40C41_AA A 32 ? A 41 ? A 33 ? A 40 ? 1 A A 53 1_555 A C 83 1_555 A A 54 1_555 A U 82 1_555 3.901 -2.338 3.170 -5.993 8.432 35.399 -4.609 -6.820 1.918 13.515 9.605 36.833 22 AA_A53A54:U82C83_AA A 53 ? A 83 ? A 54 ? A 82 ? 1 A A 54 1_555 A U 82 1_555 A C 55 1_555 A G 81 1_555 0.104 -0.912 3.074 -6.140 7.152 47.294 -1.632 -0.570 2.881 8.813 7.565 48.171 23 AA_A54C55:G81U82_AA A 54 ? A 82 ? A 55 ? A 81 ? 1 A C 55 1_555 A G 81 1_555 A C 56 1_555 A G 80 1_555 -0.067 -1.612 3.299 1.152 3.088 39.812 -2.711 0.229 3.167 4.525 -1.688 39.943 24 AA_C55C56:G80G81_AA A 55 ? A 81 ? A 56 ? A 80 ? 1 A C 56 1_555 A G 80 1_555 A C 57 1_555 A G 78 1_555 1.076 -1.459 3.220 3.844 5.541 38.404 -2.837 -1.162 3.078 8.344 -5.789 38.969 25 AA_C56C57:G78G80_AA A 56 ? A 80 ? A 57 ? A 78 ? 1 A C 57 1_555 A G 78 1_555 A A 58 1_555 A U 77 1_555 -0.094 -1.578 3.307 -1.354 12.143 31.574 -4.535 -0.042 2.546 21.343 2.379 33.800 26 AA_C57A58:U77G78_AA A 57 ? A 78 ? A 58 ? A 77 ? 1 A A 58 1_555 A U 77 1_555 A U 59 1_555 A G 76 1_555 0.083 -1.369 3.254 -0.480 6.339 40.074 -2.656 -0.171 3.011 9.180 0.695 40.554 27 AA_A58U59:G76U77_AA A 58 ? A 77 ? A 59 ? A 76 ? 1 A U 59 1_555 A G 76 1_555 A A 60 1_555 A U 75 1_555 0.353 -2.000 3.169 5.381 14.497 22.155 -7.278 0.351 1.619 33.044 -12.265 26.962 28 AA_U59A60:U75G76_AA A 59 ? A 76 ? A 60 ? A 75 ? 1 A A 60 1_555 A U 75 1_555 A G 61 1_555 A C 74 1_555 -0.308 -1.430 3.285 -0.903 9.732 28.547 -4.610 0.420 2.672 19.044 1.767 30.141 29 AA_A60G61:C74U75_AA A 60 ? A 75 ? A 61 ? A 74 ? 1 A G 61 1_555 A C 74 1_555 A G 62 1_555 A C 73 1_555 0.337 -1.724 3.592 0.249 10.273 33.412 -4.466 -0.523 2.951 17.365 -0.421 34.914 30 AA_G61G62:C73C74_AA A 61 ? A 74 ? A 62 ? A 73 ? 1 A G 62 1_555 A C 73 1_555 A G 63 1_555 A C 72 1_555 0.136 -1.740 3.203 0.030 11.633 29.356 -5.112 -0.245 2.359 21.900 -0.057 31.530 31 AA_G62G63:C72C73_AA A 62 ? A 73 ? A 63 ? A 72 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM63162-14 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id PRF _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id PRF _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4RZD _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6XKN _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.012479 _atom_sites.fract_transf_matrix[1][2] 0.007205 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014409 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003553 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_