HEADER VIRAL PROTEIN/IMMUNE SYSTEM 26-JUN-20 6XKP TITLE CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN IN COMPLEX TITLE 2 WITH NEUTRALIZING ANTIBODY CV07-270 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CV07-270 HEAVY CHAIN; COMPND 7 CHAIN: H, M; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: CV07-270 LIGHT CHAIN; COMPND 11 CHAIN: L, N; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 10090 KEYWDS SARS-COV-2, ANTIBODY, SPIKE, CORONAVIRUS, COVID-19, IMMUNE SYSTEM, KEYWDS 2 VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.LIU,M.YUAN,X.ZHU,N.C.WU,I.A.WILSON REVDAT 4 18-OCT-23 6XKP 1 REMARK REVDAT 3 25-NOV-20 6XKP 1 JRNL REVDAT 2 04-NOV-20 6XKP 1 JRNL REVDAT 1 14-OCT-20 6XKP 0 JRNL AUTH J.KREYE,S.M.REINCKE,H.C.KORNAU,E.SANCHEZ-SENDIN,V.M.CORMAN, JRNL AUTH 2 H.LIU,M.YUAN,N.C.WU,X.ZHU,C.D.LEE,J.TRIMPERT,M.HOLTJE, JRNL AUTH 3 K.DIETERT,L.STOFFLER,N.VON WARDENBURG,S.VAN HOOF, JRNL AUTH 4 M.A.HOMEYER,J.HOFFMANN,A.ABDELGAWAD,A.D.GRUBER, JRNL AUTH 5 L.D.BERTZBACH,D.VLADIMIROVA,L.Y.LI,P.C.BARTHEL,K.SKRINER, JRNL AUTH 6 A.C.HOCKE,S.HIPPENSTIEL,M.WITZENRATH,N.SUTTORP,F.KURTH, JRNL AUTH 7 C.FRANKE,M.ENDRES,D.SCHMITZ,L.M.JEWOROWSKI,A.RICHTER, JRNL AUTH 8 M.L.SCHMIDT,T.SCHWARZ,M.A.MULLER,C.DROSTEN,D.WENDISCH, JRNL AUTH 9 L.E.SANDER,N.OSTERRIEDER,I.A.WILSON,H.PRUSS JRNL TITL A THERAPEUTIC NON-SELF-REACTIVE SARS-COV-2 ANTIBODY PROTECTS JRNL TITL 2 FROM LUNG PATHOLOGY IN A COVID-19 HAMSTER MODEL. JRNL REF CELL V. 183 1058 2020 JRNL REFN ISSN 1097-4172 JRNL PMID 33058755 JRNL DOI 10.1016/J.CELL.2020.09.049 REMARK 2 REMARK 2 RESOLUTION. 2.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 3 NUMBER OF REFLECTIONS : 39568 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2055 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.72 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2581 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE SET COUNT : 137 REMARK 3 BIN FREE R VALUE : 0.3910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9177 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.19000 REMARK 3 B22 (A**2) : -0.40000 REMARK 3 B33 (A**2) : -2.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.64000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.195 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.373 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.866 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 3 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 334 527 B 334 527 5222 0.160 0.050 REMARK 3 2 H 1 214 M 1 214 6115 0.140 0.050 REMARK 3 3 L 3 210 N 3 210 5233 0.160 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6XKP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUN-20. REMARK 100 THE DEPOSITION ID IS D_1000250322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41624 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.19900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.89300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6W41 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CACODYLATE PH 6.5 0.2 M REMARK 280 SODIUM CHLORIDE 2 M AMMONIUM SULFATE 15% (V/V) ETHYLENE GLYCOL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 87.51000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 75.89250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 87.51000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 75.89250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 319 REMARK 465 VAL A 320 REMARK 465 GLN A 321 REMARK 465 PRO A 322 REMARK 465 THR A 323 REMARK 465 GLU A 324 REMARK 465 SER A 325 REMARK 465 ILE A 326 REMARK 465 VAL A 327 REMARK 465 ARG A 328 REMARK 465 PHE A 329 REMARK 465 PRO A 330 REMARK 465 ASN A 331 REMARK 465 ILE A 332 REMARK 465 THR A 333 REMARK 465 LYS A 528 REMARK 465 LYS A 529 REMARK 465 SER A 530 REMARK 465 THR A 531 REMARK 465 ASN A 532 REMARK 465 LEU A 533 REMARK 465 VAL A 534 REMARK 465 LYS A 535 REMARK 465 ASN A 536 REMARK 465 LYS A 537 REMARK 465 CYS A 538 REMARK 465 VAL A 539 REMARK 465 ASN A 540 REMARK 465 PHE A 541 REMARK 465 SER A 542 REMARK 465 GLY A 543 REMARK 465 HIS A 544 REMARK 465 HIS A 545 REMARK 465 HIS A 546 REMARK 465 HIS A 547 REMARK 465 HIS A 548 REMARK 465 HIS A 549 REMARK 465 ARG B 319 REMARK 465 VAL B 320 REMARK 465 GLN B 321 REMARK 465 PRO B 322 REMARK 465 THR B 323 REMARK 465 GLU B 324 REMARK 465 SER B 325 REMARK 465 ILE B 326 REMARK 465 VAL B 327 REMARK 465 ARG B 328 REMARK 465 PHE B 329 REMARK 465 PRO B 330 REMARK 465 ASN B 331 REMARK 465 ILE B 332 REMARK 465 THR B 333 REMARK 465 LYS B 528 REMARK 465 LYS B 529 REMARK 465 SER B 530 REMARK 465 THR B 531 REMARK 465 ASN B 532 REMARK 465 LEU B 533 REMARK 465 VAL B 534 REMARK 465 LYS B 535 REMARK 465 ASN B 536 REMARK 465 LYS B 537 REMARK 465 CYS B 538 REMARK 465 VAL B 539 REMARK 465 ASN B 540 REMARK 465 PHE B 541 REMARK 465 SER B 542 REMARK 465 GLY B 543 REMARK 465 HIS B 544 REMARK 465 HIS B 545 REMARK 465 HIS B 546 REMARK 465 HIS B 547 REMARK 465 HIS B 548 REMARK 465 HIS B 549 REMARK 465 SER H 127 REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLY H 133 REMARK 465 GLY H 134 REMARK 465 THR H 135 REMARK 465 ALA H 136 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 GLN L 1 REMARK 465 SER L 2 REMARK 465 GLU L 211 REMARK 465 CYS L 212 REMARK 465 SER L 213 REMARK 465 SER M 127 REMARK 465 SER M 128 REMARK 465 LYS M 129 REMARK 465 SER M 130 REMARK 465 GLY M 133 REMARK 465 GLY M 134 REMARK 465 SER M 215 REMARK 465 CYS M 216 REMARK 465 GLN N 1 REMARK 465 SER N 2 REMARK 465 ALA N 151 REMARK 465 GLU N 211 REMARK 465 CYS N 212 REMARK 465 SER N 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 334 CG OD1 ND2 REMARK 470 LEU A 335 CG CD1 CD2 REMARK 470 GLU A 340 CG CD OE1 OE2 REMARK 470 ARG A 357 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 360 CG OD1 ND2 REMARK 470 VAL A 362 CG1 CG2 REMARK 470 ASP A 364 CG OD1 OD2 REMARK 470 SER A 366 OG REMARK 470 VAL A 367 CG1 CG2 REMARK 470 LEU A 368 CG CD1 CD2 REMARK 470 TYR A 369 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 370 CG OD1 ND2 REMARK 470 SER A 371 OG REMARK 470 SER A 373 OG REMARK 470 LYS A 378 CG CD CE NZ REMARK 470 VAL A 382 CG1 CG2 REMARK 470 SER A 383 OG REMARK 470 THR A 385 OG1 CG2 REMARK 470 LYS A 386 CG CD CE NZ REMARK 470 LEU A 387 CD1 CD2 REMARK 470 ASN A 388 CG OD1 ND2 REMARK 470 LEU A 390 CG CD1 CD2 REMARK 470 LYS A 424 CE NZ REMARK 470 LYS A 458 CG CD CE NZ REMARK 470 LYS A 462 CE NZ REMARK 470 GLU A 471 CG CD OE1 OE2 REMARK 470 SER A 477 OG REMARK 470 PHE A 486 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 516 CG CD OE1 OE2 REMARK 470 LEU A 518 CG CD1 CD2 REMARK 470 HIS A 519 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 523 OG1 CG2 REMARK 470 VAL A 524 CG1 CG2 REMARK 470 ASN B 334 CG OD1 ND2 REMARK 470 LEU B 335 CG CD1 CD2 REMARK 470 VAL B 362 CG1 CG2 REMARK 470 ASN B 370 CG OD1 ND2 REMARK 470 SER B 371 OG REMARK 470 VAL B 382 CG1 CG2 REMARK 470 SER B 383 OG REMARK 470 LEU B 387 CG CD1 CD2 REMARK 470 ASP B 389 CG OD1 OD2 REMARK 470 LEU B 390 CG CD1 CD2 REMARK 470 THR B 393 OG1 CG2 REMARK 470 VAL B 395 CG1 CG2 REMARK 470 ARG B 408 NE CZ NH1 NH2 REMARK 470 ASN B 440 CG OD1 ND2 REMARK 470 LYS B 458 CD CE NZ REMARK 470 ASN B 481 CG OD1 ND2 REMARK 470 LEU B 518 CG CD1 CD2 REMARK 470 GLN H 1 CG CD OE1 NE2 REMARK 470 LYS H 13 CE NZ REMARK 470 LYS H 75 CE NZ REMARK 470 VAL H 184 CG1 CG2 REMARK 470 SER H 186 OG REMARK 470 SER H 187 OG REMARK 470 SER H 188 OG REMARK 470 LEU H 189 CG CD1 CD2 REMARK 470 THR H 191 OG1 CG2 REMARK 470 GLN H 192 CG CD OE1 NE2 REMARK 470 THR H 193 OG1 CG2 REMARK 470 GLU H 212 CG CD OE1 OE2 REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 LYS L 42 CE NZ REMARK 470 LYS L 111 CG CD CE NZ REMARK 470 SER L 123 OG REMARK 470 GLU L 124 CG CD OE1 OE2 REMARK 470 GLN L 127 CG CD OE1 NE2 REMARK 470 ASN L 129 CG OD1 ND2 REMARK 470 LYS L 130 CG CD CE NZ REMARK 470 LYS L 150 CG CD CE NZ REMARK 470 ASP L 152 CG OD1 OD2 REMARK 470 SER L 153 OG REMARK 470 SER L 154 OG REMARK 470 VAL L 156 CG1 CG2 REMARK 470 LYS L 157 CG CD CE NZ REMARK 470 SER L 180 OG REMARK 470 GLU L 184 CG CD OE1 OE2 REMARK 470 LYS L 187 CG CD CE NZ REMARK 470 SER L 188 OG REMARK 470 ARG L 190 CG CD NE CZ NH1 NH2 REMARK 470 SER L 191 OG REMARK 470 SER L 193 OG REMARK 470 GLU L 204 CG CD OE1 OE2 REMARK 470 THR L 210 OG1 CG2 REMARK 470 GLN M 1 CG CD OE1 NE2 REMARK 470 LYS M 13 CG CD CE NZ REMARK 470 GLN M 105 CG CD OE1 NE2 REMARK 470 LYS M 117 CD CE NZ REMARK 470 SER M 132 OG REMARK 470 THR M 135 OG1 CG2 REMARK 470 LYS M 143 CD CE NZ REMARK 470 SER M 161 OG REMARK 470 SER M 172 OG REMARK 470 VAL M 184 CG1 CG2 REMARK 470 SER M 186 OG REMARK 470 SER M 187 OG REMARK 470 SER M 188 OG REMARK 470 THR M 191 OG1 CG2 REMARK 470 ILE M 195 CG1 CG2 CD1 REMARK 470 LYS M 201 CG CD CE NZ REMARK 470 ASN M 204 CG OD1 ND2 REMARK 470 LYS M 206 CG CD CE NZ REMARK 470 LYS M 209 CE NZ REMARK 470 GLU M 212 CG CD OE1 OE2 REMARK 470 LYS M 214 CG CD CE NZ REMARK 470 GLN N 17 CG CD OE1 NE2 REMARK 470 SER N 18 OG REMARK 470 ILE N 19 CG1 CG2 CD1 REMARK 470 LYS N 42 CE NZ REMARK 470 ASN N 60 CG OD1 ND2 REMARK 470 ARG N 61 CG CD NE CZ NH1 NH2 REMARK 470 SER N 67 OG REMARK 470 SER N 76 OG REMARK 470 LYS N 111 CG CD CE NZ REMARK 470 SER N 123 OG REMARK 470 GLN N 127 CG CD OE1 NE2 REMARK 470 ASN N 129 CG OD1 ND2 REMARK 470 LYS N 130 CG CD CE NZ REMARK 470 THR N 132 OG1 CG2 REMARK 470 LEU N 133 CG CD1 CD2 REMARK 470 VAL N 145 CG1 CG2 REMARK 470 THR N 146 OG1 CG2 REMARK 470 LYS N 150 CD CE NZ REMARK 470 SER N 153 OG REMARK 470 SER N 154 OG REMARK 470 VAL N 156 CG1 CG2 REMARK 470 LYS N 157 CG CD CE NZ REMARK 470 THR N 164 OG1 CG2 REMARK 470 SER N 180 OG REMARK 470 LEU N 181 CB CG CD1 CD2 REMARK 470 GLU N 184 CG CD OE1 OE2 REMARK 470 LYS N 187 CG CD CE NZ REMARK 470 ARG N 190 CG CD NE CZ NH1 NH2 REMARK 470 SER N 201 OG REMARK 470 GLU N 204 CG CD OE1 OE2 REMARK 470 LYS N 205 CD CE NZ REMARK 470 VAL N 207 CG1 CG2 REMARK 470 THR N 210 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 501 OG SER N 56 1554 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 391 CA - CB - SG ANGL. DEV. = 8.8 DEGREES REMARK 500 LYS B 417 CA - CB - CG ANGL. DEV. = 16.1 DEGREES REMARK 500 LYS B 417 CB - CG - CD ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 352 53.30 -114.80 REMARK 500 ASN A 370 43.78 -90.98 REMARK 500 ASN A 422 -58.17 -120.24 REMARK 500 ASP A 428 42.82 -97.67 REMARK 500 LEU A 518 -157.13 -96.67 REMARK 500 ALA B 352 50.59 -116.63 REMARK 500 ASN B 422 -58.01 -120.81 REMARK 500 ASP B 428 43.15 -97.28 REMARK 500 ARG H 66 -37.94 -132.09 REMARK 500 SER H 99 20.22 -148.56 REMARK 500 ASP H 101 129.79 -171.27 REMARK 500 LYS H 117 -74.46 -104.46 REMARK 500 ASP H 144 74.65 48.88 REMARK 500 ASP L 27B -90.72 -131.40 REMARK 500 ASN L 31 51.70 -105.03 REMARK 500 VAL L 51 -53.72 74.41 REMARK 500 ALA L 84 -176.81 -170.21 REMARK 500 ASP L 152 -98.69 56.16 REMARK 500 ASN L 171 -1.67 74.83 REMARK 500 ARG M 66 -40.49 -133.29 REMARK 500 SER M 99 19.22 -145.83 REMARK 500 ASP M 101 128.18 -171.48 REMARK 500 ASP M 144 74.59 49.82 REMARK 500 ASP N 27B -89.13 -130.55 REMARK 500 ASN N 31 49.68 -109.61 REMARK 500 VAL N 51 -55.25 73.25 REMARK 500 SER N 153 8.33 56.34 REMARK 500 ASN N 171 -0.43 74.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6XKQ RELATED DB: PDB DBREF 6XKP A 319 541 UNP P0DTC2 SPIKE_SARS2 319 541 DBREF 6XKP B 319 541 UNP P0DTC2 SPIKE_SARS2 319 541 DBREF 6XKP H 1 216 PDB 6XKP 6XKP 1 216 DBREF 6XKP L 1 213 PDB 6XKP 6XKP 1 213 DBREF 6XKP M 1 216 PDB 6XKP 6XKP 1 216 DBREF 6XKP N 1 213 PDB 6XKP 6XKP 1 213 SEQADV 6XKP SER A 542 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP GLY A 543 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS A 544 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS A 545 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS A 546 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS A 547 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS A 548 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS A 549 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP SER B 542 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP GLY B 543 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS B 544 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS B 545 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS B 546 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS B 547 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS B 548 UNP P0DTC2 EXPRESSION TAG SEQADV 6XKP HIS B 549 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 231 ARG VAL GLN PRO THR GLU SER ILE VAL ARG PHE PRO ASN SEQRES 2 A 231 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 A 231 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 4 A 231 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 A 231 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 A 231 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 7 A 231 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 8 A 231 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 9 A 231 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 10 A 231 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 11 A 231 TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU SEQRES 12 A 231 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 13 A 231 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 14 A 231 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 15 A 231 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 16 A 231 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 17 A 231 PRO LYS LYS SER THR ASN LEU VAL LYS ASN LYS CYS VAL SEQRES 18 A 231 ASN PHE SER GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 231 ARG VAL GLN PRO THR GLU SER ILE VAL ARG PHE PRO ASN SEQRES 2 B 231 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 B 231 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 4 B 231 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 B 231 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 B 231 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 7 B 231 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 8 B 231 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 9 B 231 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 10 B 231 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 11 B 231 TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU SEQRES 12 B 231 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 13 B 231 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 14 B 231 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 15 B 231 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 16 B 231 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 17 B 231 PRO LYS LYS SER THR ASN LEU VAL LYS ASN LYS CYS VAL SEQRES 18 B 231 ASN PHE SER GLY HIS HIS HIS HIS HIS HIS SEQRES 1 H 232 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 H 232 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 232 PHE THR PHE SER ASP TYR TYR MET THR TRP ILE ARG GLN SEQRES 4 H 232 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER TYR ILE SER SEQRES 5 H 232 SER SER GLY SER THR ILE TYR TYR ALA ASP SER VAL LYS SEQRES 6 H 232 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SER SEQRES 7 H 232 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 232 ALA VAL TYR TYR CYS ALA ARG ALA ARG GLY SER SER GLY SEQRES 9 H 232 TRP TYR ARG ILE GLY THR ARG TRP GLY ASN TRP PHE ASP SEQRES 10 H 232 PRO TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SEQRES 11 H 232 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 12 H 232 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 13 H 232 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 14 H 232 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 15 H 232 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 16 H 232 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 17 H 232 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 18 H 232 LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 L 216 GLN SER ALA LEU THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 L 216 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 L 216 SER ASP VAL GLY GLY TYR ASN TYR VAL SER TRP TYR GLN SEQRES 4 L 216 GLN HIS PRO GLY LYS ALA PRO LYS LEU MET ILE TYR GLU SEQRES 5 L 216 VAL SER ASN ARG PRO SER GLY VAL SER ASN ARG PHE SER SEQRES 6 L 216 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 L 216 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS SER SEQRES 8 L 216 SER TYR THR SER SER SER ASN VAL VAL PHE GLY GLY GLY SEQRES 9 L 216 THR MET LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SEQRES 10 L 216 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 L 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 L 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 L 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 L 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 L 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 L 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 L 216 THR VAL ALA PRO THR GLU CYS SER SEQRES 1 M 232 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 M 232 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 M 232 PHE THR PHE SER ASP TYR TYR MET THR TRP ILE ARG GLN SEQRES 4 M 232 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER TYR ILE SER SEQRES 5 M 232 SER SER GLY SER THR ILE TYR TYR ALA ASP SER VAL LYS SEQRES 6 M 232 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN SER SEQRES 7 M 232 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 M 232 ALA VAL TYR TYR CYS ALA ARG ALA ARG GLY SER SER GLY SEQRES 9 M 232 TRP TYR ARG ILE GLY THR ARG TRP GLY ASN TRP PHE ASP SEQRES 10 M 232 PRO TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SEQRES 11 M 232 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 12 M 232 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 13 M 232 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 14 M 232 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 15 M 232 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 16 M 232 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 17 M 232 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 18 M 232 LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS SEQRES 1 N 216 GLN SER ALA LEU THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 N 216 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 N 216 SER ASP VAL GLY GLY TYR ASN TYR VAL SER TRP TYR GLN SEQRES 4 N 216 GLN HIS PRO GLY LYS ALA PRO LYS LEU MET ILE TYR GLU SEQRES 5 N 216 VAL SER ASN ARG PRO SER GLY VAL SER ASN ARG PHE SER SEQRES 6 N 216 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 N 216 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS SER SEQRES 8 N 216 SER TYR THR SER SER SER ASN VAL VAL PHE GLY GLY GLY SEQRES 9 N 216 THR MET LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SEQRES 10 N 216 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 N 216 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 N 216 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 N 216 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 N 216 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 N 216 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 N 216 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 N 216 THR VAL ALA PRO THR GLU CYS SER HET NAG A1001 14 HET NAG B1001 14 HET SO4 H 301 5 HET SO4 H 302 5 HET SO4 H 303 5 HET SO4 L 301 5 HET SO4 L 302 5 HET SO4 M 301 5 HET SO4 M 302 5 HET SO4 N 301 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NAG 2(C8 H15 N O6) FORMUL 9 SO4 8(O4 S 2-) HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 SER A 349 TRP A 353 5 5 HELIX 3 AA3 TYR A 365 ASN A 370 1 6 HELIX 4 AA4 PRO A 384 ASP A 389 5 6 HELIX 5 AA5 ASP A 405 ILE A 410 5 6 HELIX 6 AA6 GLY A 416 ASN A 422 1 7 HELIX 7 AA7 SER A 438 SER A 443 1 6 HELIX 8 AA8 GLY A 502 TYR A 505 5 4 HELIX 9 AA9 PRO B 337 ASN B 343 1 7 HELIX 10 AB1 TYR B 365 ASN B 370 1 6 HELIX 11 AB2 SER B 383 ASP B 389 5 7 HELIX 12 AB3 ASP B 405 ILE B 410 5 6 HELIX 13 AB4 GLY B 416 ASN B 422 1 7 HELIX 14 AB5 SER B 438 SER B 443 1 6 HELIX 15 AB6 GLY B 502 TYR B 505 5 4 HELIX 16 AB7 THR H 28 TYR H 32 5 5 HELIX 17 AB8 ASP H 61 LYS H 64 5 4 HELIX 18 AB9 ARG H 83 THR H 87 5 5 HELIX 19 AC1 ARG H 100C GLY H 100I 5 7 HELIX 20 AC2 PRO H 185 GLY H 190 5 6 HELIX 21 AC3 LYS H 201 ASN H 204 5 4 HELIX 22 AC4 GLN L 79 GLU L 83 5 5 HELIX 23 AC5 SER L 122 ALA L 128 1 7 HELIX 24 AC6 THR L 182 SER L 188 1 7 HELIX 25 AC7 THR M 28 TYR M 32 5 5 HELIX 26 AC8 ARG M 83 THR M 87 5 5 HELIX 27 AC9 TYR M 100B GLY M 100I 5 8 HELIX 28 AD1 SER M 156 ALA M 158 5 3 HELIX 29 AD2 PRO M 185 LEU M 189 5 5 HELIX 30 AD3 LYS M 201 ASN M 204 5 4 HELIX 31 AD4 GLN N 79 GLU N 83 5 5 HELIX 32 AD5 SER N 122 ALA N 128 1 7 HELIX 33 AD6 THR N 182 SER N 188 1 7 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O ALA A 397 N LYS A 356 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O VAL A 510 N PHE A 400 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N CYS A 432 O LEU A 513 SHEET 5 AA1 5 THR A 376 CYS A 379 -1 N LYS A 378 O VAL A 433 SHEET 1 AA2 3 CYS A 361 VAL A 362 0 SHEET 2 AA2 3 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 3 AA2 3 CYS A 391 PHE A 392 -1 N PHE A 392 O VAL A 524 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 5 ASN B 354 ILE B 358 0 SHEET 2 AA5 5 ASN B 394 ARG B 403 -1 O VAL B 395 N ILE B 358 SHEET 3 AA5 5 PRO B 507 GLU B 516 -1 O VAL B 510 N PHE B 400 SHEET 4 AA5 5 CYS B 432 ASN B 437 -1 N ILE B 434 O VAL B 511 SHEET 5 AA5 5 THR B 376 CYS B 379 -1 N LYS B 378 O VAL B 433 SHEET 1 AA6 3 CYS B 361 VAL B 362 0 SHEET 2 AA6 3 VAL B 524 CYS B 525 1 O CYS B 525 N CYS B 361 SHEET 3 AA6 3 CYS B 391 PHE B 392 -1 N PHE B 392 O VAL B 524 SHEET 1 AA7 2 LEU B 452 ARG B 454 0 SHEET 2 AA7 2 LEU B 492 SER B 494 -1 O GLN B 493 N TYR B 453 SHEET 1 AA8 2 TYR B 473 GLN B 474 0 SHEET 2 AA8 2 CYS B 488 TYR B 489 -1 O TYR B 489 N TYR B 473 SHEET 1 AA9 4 GLN H 3 SER H 7 0 SHEET 2 AA9 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AA9 4 SER H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA9 4 PHE H 67 ASP H 72 -1 N ASP H 72 O SER H 77 SHEET 1 AB1 6 GLY H 10 VAL H 12 0 SHEET 2 AB1 6 THR H 107 VAL H 111 1 O THR H 110 N GLY H 10 SHEET 3 AB1 6 ALA H 88 ALA H 95 -1 N TYR H 90 O THR H 107 SHEET 4 AB1 6 MET H 34 GLN H 39 -1 N ILE H 37 O TYR H 91 SHEET 5 AB1 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AB1 6 ILE H 57 TYR H 59 -1 O TYR H 58 N TYR H 50 SHEET 1 AB2 4 GLY H 10 VAL H 12 0 SHEET 2 AB2 4 THR H 107 VAL H 111 1 O THR H 110 N GLY H 10 SHEET 3 AB2 4 ALA H 88 ALA H 95 -1 N TYR H 90 O THR H 107 SHEET 4 AB2 4 PHE H 100L TRP H 103 -1 O ASP H 101 N ARG H 94 SHEET 1 AB3 4 SER H 120 LEU H 124 0 SHEET 2 AB3 4 LEU H 138 TYR H 145 -1 O LYS H 143 N SER H 120 SHEET 3 AB3 4 TYR H 176 VAL H 182 -1 O TYR H 176 N TYR H 145 SHEET 4 AB3 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AB4 4 SER H 120 LEU H 124 0 SHEET 2 AB4 4 LEU H 138 TYR H 145 -1 O LYS H 143 N SER H 120 SHEET 3 AB4 4 TYR H 176 VAL H 182 -1 O TYR H 176 N TYR H 145 SHEET 4 AB4 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AB5 3 THR H 151 TRP H 154 0 SHEET 2 AB5 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AB5 3 THR H 205 LYS H 210 -1 O VAL H 207 N VAL H 198 SHEET 1 AB6 5 SER L 9 GLY L 13 0 SHEET 2 AB6 5 THR L 102 VAL L 106 1 O THR L 105 N VAL L 11 SHEET 3 AB6 5 ASP L 85 TYR L 91 -1 N TYR L 86 O THR L 102 SHEET 4 AB6 5 VAL L 33 GLN L 38 -1 N GLN L 38 O ASP L 85 SHEET 5 AB6 5 LYS L 45 ILE L 48 -1 O MET L 47 N TRP L 35 SHEET 1 AB7 4 SER L 9 GLY L 13 0 SHEET 2 AB7 4 THR L 102 VAL L 106 1 O THR L 105 N VAL L 11 SHEET 3 AB7 4 ASP L 85 TYR L 91 -1 N TYR L 86 O THR L 102 SHEET 4 AB7 4 VAL L 96 PHE L 98 -1 O VAL L 97 N SER L 90 SHEET 1 AB8 3 ILE L 19 THR L 24 0 SHEET 2 AB8 3 THR L 70 ILE L 75 -1 O ILE L 75 N ILE L 19 SHEET 3 AB8 3 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB9 4 SER L 115 PHE L 119 0 SHEET 2 AB9 4 ALA L 131 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AB9 4 TYR L 173 LEU L 181 -1 O LEU L 179 N LEU L 133 SHEET 4 AB9 4 VAL L 160 THR L 162 -1 N GLU L 161 O TYR L 178 SHEET 1 AC1 4 SER L 115 PHE L 119 0 SHEET 2 AC1 4 ALA L 131 PHE L 140 -1 O VAL L 134 N PHE L 119 SHEET 3 AC1 4 TYR L 173 LEU L 181 -1 O LEU L 179 N LEU L 133 SHEET 4 AC1 4 SER L 166 LYS L 167 -1 N SER L 166 O ALA L 174 SHEET 1 AC2 4 SER L 154 VAL L 156 0 SHEET 2 AC2 4 THR L 146 ALA L 151 -1 N ALA L 151 O SER L 154 SHEET 3 AC2 4 TYR L 192 HIS L 198 -1 O THR L 197 N THR L 146 SHEET 4 AC2 4 SER L 201 VAL L 207 -1 O LYS L 205 N CYS L 194 SHEET 1 AC3 4 GLN M 3 SER M 7 0 SHEET 2 AC3 4 LEU M 18 SER M 25 -1 O ALA M 23 N VAL M 5 SHEET 3 AC3 4 SER M 77 MET M 82 -1 O MET M 82 N LEU M 18 SHEET 4 AC3 4 PHE M 67 ASP M 72 -1 N SER M 70 O TYR M 79 SHEET 1 AC4 6 GLY M 10 VAL M 12 0 SHEET 2 AC4 6 THR M 107 VAL M 111 1 O THR M 110 N GLY M 10 SHEET 3 AC4 6 ALA M 88 ALA M 95 -1 N TYR M 90 O THR M 107 SHEET 4 AC4 6 MET M 34 GLN M 39 -1 N ILE M 37 O TYR M 91 SHEET 5 AC4 6 LEU M 45 ILE M 51 -1 O GLU M 46 N ARG M 38 SHEET 6 AC4 6 ILE M 57 TYR M 59 -1 O TYR M 58 N TYR M 50 SHEET 1 AC5 4 GLY M 10 VAL M 12 0 SHEET 2 AC5 4 THR M 107 VAL M 111 1 O THR M 110 N GLY M 10 SHEET 3 AC5 4 ALA M 88 ALA M 95 -1 N TYR M 90 O THR M 107 SHEET 4 AC5 4 PHE M 100L TRP M 103 -1 O PRO M 102 N ARG M 94 SHEET 1 AC6 4 SER M 120 LEU M 124 0 SHEET 2 AC6 4 ALA M 136 TYR M 145 -1 O LEU M 141 N PHE M 122 SHEET 3 AC6 4 TYR M 176 VAL M 184 -1 O TYR M 176 N TYR M 145 SHEET 4 AC6 4 VAL M 163 THR M 165 -1 N HIS M 164 O VAL M 181 SHEET 1 AC7 4 SER M 120 LEU M 124 0 SHEET 2 AC7 4 ALA M 136 TYR M 145 -1 O LEU M 141 N PHE M 122 SHEET 3 AC7 4 TYR M 176 VAL M 184 -1 O TYR M 176 N TYR M 145 SHEET 4 AC7 4 VAL M 169 LEU M 170 -1 N VAL M 169 O SER M 177 SHEET 1 AC8 3 THR M 151 TRP M 154 0 SHEET 2 AC8 3 TYR M 194 HIS M 200 -1 O ASN M 197 N SER M 153 SHEET 3 AC8 3 THR M 205 VAL M 211 -1 O VAL M 207 N VAL M 198 SHEET 1 AC9 5 SER N 9 GLY N 13 0 SHEET 2 AC9 5 THR N 102 VAL N 106 1 O THR N 105 N VAL N 11 SHEET 3 AC9 5 ASP N 85 TYR N 91 -1 N TYR N 86 O THR N 102 SHEET 4 AC9 5 VAL N 33 GLN N 38 -1 N GLN N 38 O ASP N 85 SHEET 5 AC9 5 LYS N 45 ILE N 48 -1 O MET N 47 N TRP N 35 SHEET 1 AD1 4 SER N 9 GLY N 13 0 SHEET 2 AD1 4 THR N 102 VAL N 106 1 O THR N 105 N VAL N 11 SHEET 3 AD1 4 ASP N 85 TYR N 91 -1 N TYR N 86 O THR N 102 SHEET 4 AD1 4 VAL N 96 PHE N 98 -1 O VAL N 97 N SER N 90 SHEET 1 AD2 3 ILE N 19 THR N 24 0 SHEET 2 AD2 3 THR N 70 ILE N 75 -1 O LEU N 73 N ILE N 21 SHEET 3 AD2 3 PHE N 62 SER N 67 -1 N SER N 65 O SER N 72 SHEET 1 AD3 4 SER N 115 PHE N 119 0 SHEET 2 AD3 4 ALA N 131 PHE N 140 -1 O SER N 138 N SER N 115 SHEET 3 AD3 4 TYR N 173 LEU N 181 -1 O TYR N 173 N PHE N 140 SHEET 4 AD3 4 VAL N 160 THR N 162 -1 N GLU N 161 O TYR N 178 SHEET 1 AD4 4 SER N 115 PHE N 119 0 SHEET 2 AD4 4 ALA N 131 PHE N 140 -1 O SER N 138 N SER N 115 SHEET 3 AD4 4 TYR N 173 LEU N 181 -1 O TYR N 173 N PHE N 140 SHEET 4 AD4 4 SER N 166 LYS N 167 -1 N SER N 166 O ALA N 174 SHEET 1 AD5 3 VAL N 145 LYS N 150 0 SHEET 2 AD5 3 TYR N 192 HIS N 198 -1 O GLN N 195 N ALA N 148 SHEET 3 AD5 3 SER N 201 VAL N 207 -1 O VAL N 203 N VAL N 196 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.06 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.04 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.02 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 5 CYS B 336 CYS B 361 1555 1555 2.05 SSBOND 6 CYS B 379 CYS B 432 1555 1555 2.04 SSBOND 7 CYS B 391 CYS B 525 1555 1555 2.32 SSBOND 8 CYS B 480 CYS B 488 1555 1555 2.05 SSBOND 9 CYS H 22 CYS H 92 1555 1555 2.05 SSBOND 10 CYS H 140 CYS H 196 1555 1555 2.08 SSBOND 11 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 12 CYS L 135 CYS L 194 1555 1555 2.02 SSBOND 13 CYS M 22 CYS M 92 1555 1555 2.04 SSBOND 14 CYS M 140 CYS M 196 1555 1555 2.02 SSBOND 15 CYS N 23 CYS N 88 1555 1555 2.03 SSBOND 16 CYS N 135 CYS N 194 1555 1555 2.05 LINK ND2 ASN A 343 C1 NAG A1001 1555 1555 1.43 LINK ND2 ASN B 343 C1 NAG B1001 1555 1555 1.44 CISPEP 1 ASP H 101 PRO H 102 0 0.15 CISPEP 2 PHE H 146 PRO H 147 0 -1.53 CISPEP 3 GLU H 148 PRO H 149 0 1.42 CISPEP 4 TYR L 141 PRO L 142 0 1.60 CISPEP 5 ASP M 101 PRO M 102 0 -1.29 CISPEP 6 PHE M 146 PRO M 147 0 -3.93 CISPEP 7 GLU M 148 PRO M 149 0 0.40 CISPEP 8 TYR N 141 PRO N 142 0 2.22 CRYST1 175.020 151.785 66.015 90.00 95.44 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005714 0.000000 0.000544 0.00000 SCALE2 0.000000 0.006588 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015217 0.00000