HEADER PROTEIN BINDING 14-JUL-20 6XRY TITLE INTRINSICALLY DISORDERED BACTERIAL POLAR ORGANIZING PROTEIN Z, POPZ, TITLE 2 INTERACTS WITH PROTEIN BINDING PARTNERS THROUGH AN N-TERMINAL TITLE 3 MOLECULAR RECOGNITION FEATURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLAR ORGANIZING PROTEIN Z; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POPZ; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER VIBRIOIDES (STRAIN ATCC 19089 / SOURCE 3 CB15); SOURCE 4 ORGANISM_TAXID: 190650; SOURCE 5 STRAIN: ATCC 19089 / CB15; SOURCE 6 GENE: POPZ, CC_1319; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS MOLECULAR RECOGNITION FEATURE, MORF, HUB PROTEIN, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.T.NORDYKE,Y.M.AHMED,R.Z.PUTERBAUGH,G.R.BOWMAN,K.VARGA REVDAT 4 15-MAY-24 6XRY 1 REMARK REVDAT 3 14-JUN-23 6XRY 1 REMARK REVDAT 2 09-DEC-20 6XRY 1 JRNL REVDAT 1 04-NOV-20 6XRY 0 JRNL AUTH C.T.NORDYKE,Y.M.AHMED,R.Z.PUTERBAUGH,G.R.BOWMAN,K.VARGA JRNL TITL INTRINSICALLY DISORDERED BACTERIAL POLAR ORGANIZING PROTEIN JRNL TITL 2 Z, POPZ, INTERACTS WITH PROTEIN BINDING PARTNERS THROUGH AN JRNL TITL 3 N-TERMINAL MOLECULAR RECOGNITION FEATURE. JRNL REF J.MOL.BIOL. V. 432 6092 2020 JRNL REFN ESSN 1089-8638 JRNL PMID 33058876 JRNL DOI 10.1016/J.JMB.2020.09.020 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PONDEROSA-C/S REMARK 3 AUTHORS : LEE, STARK, AND MARKLEY REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XRY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000248849. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298; 298; 298 REMARK 210 PH : 5.5; 5.5; 5.5; 5.5 REMARK 210 IONIC STRENGTH : 20 MM NACL; 20 MM NACL; 20 MM REMARK 210 NACL; 20 MM NACL REMARK 210 PRESSURE : 1.0 ATM; 1 ATM; 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 913 UM [U-99% 13C; U-99% 15N] REMARK 210 POLAR ORGANIZING PROTEIN Z, 95% REMARK 210 H2O/5% D2O; 142 UM [U-99% 15N] REMARK 210 POLAR ORGANIZING PROTEIN Z, 5.4% REMARK 210 ACRYLAMIDE GEL WITH 5.4 MM OUTER REMARK 210 DIAMETER (OD),95% H2O/5% D2O; REMARK 210 142 UM [U-99% 15N] POLAR REMARK 210 ORGANIZING PROTEIN Z, 5.4% REMARK 210 ACRYLAMIDE GEL WITH 6.0 MM OUTER REMARK 210 DIAMETER, 95% H2O/5% D2O; 142 UM REMARK 210 [U-99% 15N] POLAR ORGANIZING REMARK 210 PROTEIN Z, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HN(CA)CO; 3D HNCA; 3D HN(CO)CA; REMARK 210 3D HNCACB; 3D CBCA(CO)NH; 3D REMARK 210 C(CO)NH; 3D HBHA(CO)NH; 3D REMARK 210 HBHANH; 3D H(CCO)NH; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY ALIPHATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, NMRPIPE, I-PINE, NMRFAM REMARK 210 -SPARKY 1.41, PONDEROSA-C/S REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 4 83.15 -172.82 REMARK 500 1 GLU A 29 55.39 -145.32 REMARK 500 1 ALA A 35 59.25 -161.88 REMARK 500 1 GLU A 52 17.16 -144.47 REMARK 500 1 GLU A 63 159.52 59.20 REMARK 500 1 ALA A 88 -50.19 173.35 REMARK 500 1 ARG A 100 95.65 -57.26 REMARK 500 1 ALA A 104 -74.98 -159.25 REMARK 500 1 GLU A 105 -87.07 58.89 REMARK 500 1 GLN A 106 -27.97 -158.83 REMARK 500 1 LEU A 107 -72.80 -55.58 REMARK 500 1 VAL A 110 90.76 44.87 REMARK 500 1 ALA A 112 -47.20 -165.73 REMARK 500 1 ALA A 113 165.05 57.27 REMARK 500 1 SER A 118 114.84 -167.93 REMARK 500 1 SER A 125 55.21 -140.22 REMARK 500 1 HIS A 138 -59.52 -146.32 REMARK 500 2 GLN A 6 -71.50 -170.09 REMARK 500 2 GLU A 7 87.37 -165.14 REMARK 500 2 PRO A 8 86.53 -61.72 REMARK 500 2 ALA A 28 76.59 56.89 REMARK 500 2 GLU A 29 56.59 -145.41 REMARK 500 2 ALA A 34 109.98 60.44 REMARK 500 2 ILE A 60 45.62 -172.16 REMARK 500 2 ASP A 74 81.33 -171.86 REMARK 500 2 ASP A 76 87.49 58.26 REMARK 500 2 TYR A 89 78.51 -158.17 REMARK 500 2 ALA A 95 71.07 52.94 REMARK 500 2 PHE A 98 166.46 57.84 REMARK 500 2 ARG A 100 19.70 58.60 REMARK 500 2 GLU A 102 -41.88 -177.64 REMARK 500 2 ALA A 104 -162.48 59.76 REMARK 500 2 LEU A 107 -62.19 -125.81 REMARK 500 2 ALA A 116 -55.83 -137.82 REMARK 500 2 LEU A 127 119.06 -167.25 REMARK 500 2 ASP A 132 -58.01 -136.07 REMARK 500 3 GLN A 6 -179.84 -69.11 REMARK 500 3 ARG A 18 -101.51 41.51 REMARK 500 3 GLU A 33 29.08 49.49 REMARK 500 3 ASP A 51 -55.46 -149.02 REMARK 500 3 GLU A 52 19.52 -160.86 REMARK 500 3 LEU A 54 144.67 62.00 REMARK 500 3 ASP A 74 32.89 -148.70 REMARK 500 3 GLU A 84 171.58 179.49 REMARK 500 3 ALA A 94 168.03 72.60 REMARK 500 3 VAL A 97 -64.99 -145.55 REMARK 500 3 ASP A 101 40.10 -96.23 REMARK 500 3 LEU A 107 -66.90 70.75 REMARK 500 3 ALA A 117 118.57 61.42 REMARK 500 3 SER A 118 68.19 -115.81 REMARK 500 REMARK 500 THIS ENTRY HAS 361 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30773 RELATED DB: BMRB REMARK 900 INTRINSICALLY DISORDERED BACTERIAL POLAR ORGANIZING PROTEIN Z, POPZ, REMARK 900 INTERACTS WITH PROTEIN BINDING PARTNERS THROUGH AN N-TERMINAL REMARK 900 MOLECULAR RECOGNITION FEATURE DBREF 6XRY A 1 133 UNP Q9A8N4 Q9A8N4_CAUVC 1 133 SEQADV 6XRY LEU A 134 UNP Q9A8N4 EXPRESSION TAG SEQADV 6XRY GLU A 135 UNP Q9A8N4 EXPRESSION TAG SEQADV 6XRY HIS A 136 UNP Q9A8N4 EXPRESSION TAG SEQADV 6XRY HIS A 137 UNP Q9A8N4 EXPRESSION TAG SEQADV 6XRY HIS A 138 UNP Q9A8N4 EXPRESSION TAG SEQADV 6XRY HIS A 139 UNP Q9A8N4 EXPRESSION TAG SEQADV 6XRY HIS A 140 UNP Q9A8N4 EXPRESSION TAG SEQADV 6XRY HIS A 141 UNP Q9A8N4 EXPRESSION TAG SEQRES 1 A 141 MET SER ASP GLN SER GLN GLU PRO THR MET GLU GLU ILE SEQRES 2 A 141 LEU ALA SER ILE ARG ARG ILE ILE SER GLU ASP ASP ALA SEQRES 3 A 141 PRO ALA GLU PRO ALA ALA GLU ALA ALA PRO PRO PRO PRO SEQRES 4 A 141 PRO GLU PRO GLU PRO GLU PRO VAL SER PHE ASP ASP GLU SEQRES 5 A 141 VAL LEU GLU LEU THR ASP PRO ILE ALA PRO GLU PRO GLU SEQRES 6 A 141 LEU PRO PRO LEU GLU THR VAL GLY ASP ILE ASP VAL TYR SEQRES 7 A 141 SER PRO PRO GLU PRO GLU SER GLU PRO ALA TYR THR PRO SEQRES 8 A 141 PRO PRO ALA ALA PRO VAL PHE ASP ARG ASP GLU VAL ALA SEQRES 9 A 141 GLU GLN LEU VAL GLY VAL SER ALA ALA SER ALA ALA ALA SEQRES 10 A 141 SER ALA PHE GLY SER LEU SER SER ALA LEU LEU MET PRO SEQRES 11 A 141 LYS ASP GLY LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 AA1 THR A 9 ARG A 18 1 10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1