HEADER SUGAR BINDING PROTEIN 16-JUL-20 6XSV TITLE X-RAY STRUCTURE OF A TETRAGONAL CRYSTAL FORM OF ALPHA AMYLASE FROM TITLE 2 ASPERGILLUS ORYZAE (TALA-AMYLASE) AT 1.65 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-AMYLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; SOURCE 3 ORGANISM_COMMON: YELLOW KOJI MOLD; SOURCE 4 ORGANISM_TAXID: 5062; SOURCE 5 GENE: RHAG, AMY3, OAORY_01056410; SOURCE 6 EXPRESSION_SYSTEM: ASPERGILLUS ORYZAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 5062 KEYWDS SUBSTRATE COMPLEX, NOVO LIPASE, CATALYTIC SITE, LIGANDS, SUGAR KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.MCPHERSON REVDAT 4 18-OCT-23 6XSV 1 REMARK REVDAT 3 23-JUN-21 6XSV 1 JRNL REVDAT 2 21-APR-21 6XSV 1 JRNL REVDAT 1 14-OCT-20 6XSV 0 JRNL AUTH C.L.GEE,J.M.HOLTON,A.MCPHERSON JRNL TITL STRUCTURES OF TWO NOVEL CRYSTAL FORMS OF ASPERGILLUS ORYZAE JRNL TITL 2 ALPHA AMYLASE (TAKA-AMYLASE). JRNL REF J.BIOSCI.BIOENG. V. 131 605 2021 JRNL REFN ISSN 1389-1723 JRNL PMID 33814275 JRNL DOI 10.1016/J.JBIOSC.2021.02.008 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.320 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 65955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3309 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 66.4500 - 4.7600 1.00 2936 154 0.1601 0.1664 REMARK 3 2 4.7600 - 3.7800 1.00 2729 146 0.1266 0.1604 REMARK 3 3 3.7800 - 3.3000 1.00 2669 150 0.1530 0.1842 REMARK 3 4 3.3000 - 3.0000 1.00 2661 147 0.1667 0.2163 REMARK 3 5 3.0000 - 2.7800 1.00 2643 146 0.1745 0.2204 REMARK 3 6 2.7800 - 2.6200 1.00 2592 164 0.1818 0.2186 REMARK 3 7 2.6200 - 2.4900 1.00 2640 137 0.1712 0.1946 REMARK 3 8 2.4900 - 2.3800 1.00 2639 130 0.1771 0.2384 REMARK 3 9 2.3800 - 2.2900 1.00 2603 128 0.1793 0.2129 REMARK 3 10 2.2900 - 2.2100 1.00 2597 142 0.1864 0.2063 REMARK 3 11 2.2100 - 2.1400 1.00 2589 140 0.1937 0.2426 REMARK 3 12 2.1400 - 2.0800 1.00 2577 143 0.2018 0.2356 REMARK 3 13 2.0800 - 2.0200 1.00 2592 140 0.2059 0.2368 REMARK 3 14 2.0200 - 1.9700 1.00 2560 128 0.2175 0.2591 REMARK 3 15 1.9700 - 1.9300 1.00 2601 145 0.2297 0.2423 REMARK 3 16 1.9300 - 1.8900 1.00 2593 125 0.2307 0.2723 REMARK 3 17 1.8900 - 1.8500 1.00 2577 127 0.2346 0.2594 REMARK 3 18 1.8500 - 1.8200 1.00 2585 123 0.2430 0.2579 REMARK 3 19 1.8200 - 1.7800 1.00 2559 146 0.2621 0.2835 REMARK 3 20 1.7800 - 1.7500 1.00 2546 131 0.2756 0.3329 REMARK 3 21 1.7500 - 1.7200 1.00 2585 147 0.3008 0.3193 REMARK 3 22 1.7200 - 1.7000 0.99 2534 114 0.3261 0.3022 REMARK 3 23 1.7000 - 1.6700 0.99 2572 134 0.3426 0.3508 REMARK 3 24 1.6700 - 1.6500 0.97 2467 122 0.3610 0.3639 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE WAS REFINED TO CONVERGENCE IN REMARK 3 REFMAC THEN PASSED THROUGH TEN RUNS OF COOT REBUILDING AND REMARK 3 REFINE FROM PHENIX. REMARK 4 REMARK 4 6XSV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-20. REMARK 100 THE DEPOSITION ID IS D_1000250702. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 6 - 7.247 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 300K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66065 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 66.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 124.3 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : 0.12800 REMARK 200 FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 41.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SIMBAD REMARK 200 STARTING MODEL: 2TAA REMARK 200 REMARK 200 REMARK: ELONGATED RECTANGULAR PRISMS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS GROWN BY SITTING DROP VAPOR REMARK 280 DIFFUSION IN CRYSCHEM PLATES USING 0.6 ML RESERVOIRS OF 20% PEG REMARK 280 3350 IN 0.1 M MES BUFFER AT PH 6.5. DROPS COMPOSED OF EQUAL REMARK 280 AMOUNTS OF THE PROTEIN AT 30 MG/ML IN WATER WITH THE RESERVOIR REMARK 280 SOLUTION. CRYSTALS GREW AFTER ABOUT 0NE TO TWO WEEKS AT 298 K, REMARK 280 VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 132.90600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.56300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.56300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.45300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.56300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.56300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 199.35900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.56300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.56300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.45300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.56300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.56300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 199.35900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 132.90600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 MET A -19 REMARK 465 VAL A -18 REMARK 465 ALA A -17 REMARK 465 TRP A -16 REMARK 465 TRP A -15 REMARK 465 SER A -14 REMARK 465 LEU A -13 REMARK 465 PHE A -12 REMARK 465 LEU A -11 REMARK 465 TYR A -10 REMARK 465 GLY A -9 REMARK 465 LEU A -8 REMARK 465 GLN A -7 REMARK 465 VAL A -6 REMARK 465 ALA A -5 REMARK 465 ALA A -4 REMARK 465 PRO A -3 REMARK 465 ALA A -2 REMARK 465 LEU A -1 REMARK 465 ALA A 0 REMARK 465 SER A 477 REMARK 465 SER A 478 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 138 O HOH A 601 0.95 REMARK 500 NZ LYS A 138 O HOH A 601 1.49 REMARK 500 HZ3 LYS A 138 O HOH A 601 1.55 REMARK 500 O HOH A 737 O HOH A 997 1.75 REMARK 500 O HOH A 639 O HOH A 827 1.83 REMARK 500 O HOH A 986 O HOH A 1010 1.89 REMARK 500 O HOH A 627 O HOH A 827 1.94 REMARK 500 O HOH A 955 O HOH A 978 1.99 REMARK 500 OE1 GLN A 153 O HOH A 602 2.03 REMARK 500 O HOH A 997 O HOH A 1107 2.04 REMARK 500 O6 MAN A 503 O HOH A 603 2.06 REMARK 500 O HOH A 948 O HOH A 1010 2.06 REMARK 500 O HOH A 621 O HOH A 997 2.07 REMARK 500 OD1 ASP A 189 O HOH A 604 2.07 REMARK 500 O HOH A 787 O HOH A 1035 2.17 REMARK 500 O HOH A 1008 O HOH A 1075 2.17 REMARK 500 O HOH A 607 O HOH A 609 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1013 O HOH A 1013 7555 1.76 REMARK 500 O HOH A 1102 O HOH A 1106 7555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 78 40.09 -83.30 REMARK 500 GLN A 85 -30.74 -132.89 REMARK 500 ASP A 168 -154.34 -146.60 REMARK 500 ASP A 340 122.58 -31.89 REMARK 500 ALA A 456 145.63 -171.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MAN A 503 REMARK 610 NAG A 508 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 506 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 121 OD1 REMARK 620 2 GLU A 162 O 155.9 REMARK 620 3 ASP A 175 OD1 77.6 115.9 REMARK 620 4 ASP A 175 OD2 124.9 76.1 51.1 REMARK 620 5 HIS A 210 O 74.5 83.5 140.9 159.5 REMARK 620 6 HOH A 738 O 90.4 76.2 72.2 91.5 81.2 REMARK 620 7 HOH A 781 O 72.9 128.2 76.7 76.6 119.2 147.2 REMARK 620 8 HOH A 842 O 113.7 71.3 136.7 95.3 80.3 144.0 68.4 REMARK 620 N 1 2 3 4 5 6 7 DBREF 6XSV A -20 478 UNP B0FZ76 B0FZ76_ASPOZ 1 499 SEQADV 6XSV GLN A 35 UNP B0FZ76 ARG 56 CONFLICT SEQRES 1 A 499 MET MET VAL ALA TRP TRP SER LEU PHE LEU TYR GLY LEU SEQRES 2 A 499 GLN VAL ALA ALA PRO ALA LEU ALA ALA THR PRO ALA ASP SEQRES 3 A 499 TRP ARG SER GLN SER ILE TYR PHE LEU LEU THR ASP ARG SEQRES 4 A 499 PHE ALA ARG THR ASP GLY SER THR THR ALA THR CYS ASN SEQRES 5 A 499 THR ALA ASP GLN LYS TYR CYS GLY GLY THR TRP GLN GLY SEQRES 6 A 499 ILE ILE ASP LYS LEU ASP TYR ILE GLN GLY MET GLY PHE SEQRES 7 A 499 THR ALA ILE TRP ILE THR PRO VAL THR ALA GLN LEU PRO SEQRES 8 A 499 GLN THR THR ALA TYR GLY ASP ALA TYR HIS GLY TYR TRP SEQRES 9 A 499 GLN GLN ASP ILE TYR SER LEU ASN GLU ASN TYR GLY THR SEQRES 10 A 499 ALA ASP ASP LEU LYS ALA LEU SER SER ALA LEU HIS GLU SEQRES 11 A 499 ARG GLY MET TYR LEU MET VAL ASP VAL VAL ALA ASN HIS SEQRES 12 A 499 MET GLY TYR ASP GLY ALA GLY SER SER VAL ASP TYR SER SEQRES 13 A 499 VAL PHE LYS PRO PHE SER SER GLN ASP TYR PHE HIS PRO SEQRES 14 A 499 PHE CYS LEU ILE GLN ASN TYR GLU ASP GLN THR GLN VAL SEQRES 15 A 499 GLU ASP CYS TRP LEU GLY ASP ASN THR VAL SER LEU PRO SEQRES 16 A 499 ASP LEU ASP THR THR LYS ASP VAL VAL LYS ASN GLU TRP SEQRES 17 A 499 TYR ASP TRP VAL GLY SER LEU VAL SER ASN TYR SER ILE SEQRES 18 A 499 ASP GLY LEU ARG ILE ASP THR VAL LYS HIS VAL GLN LYS SEQRES 19 A 499 ASP PHE TRP PRO GLY TYR ASN LYS ALA ALA GLY VAL TYR SEQRES 20 A 499 CYS ILE GLY GLU VAL LEU ASP GLY ASP PRO ALA TYR THR SEQRES 21 A 499 CYS PRO TYR GLN ASN VAL MET ASP GLY VAL LEU ASN TYR SEQRES 22 A 499 PRO ILE TYR TYR PRO LEU LEU ASN ALA PHE LYS SER THR SEQRES 23 A 499 SER GLY SER MET ASP ASP LEU TYR ASN MET ILE ASN THR SEQRES 24 A 499 VAL LYS SER ASP CYS PRO ASP SER THR LEU LEU GLY THR SEQRES 25 A 499 PHE VAL GLU ASN HIS ASP ASN PRO ARG PHE ALA SER TYR SEQRES 26 A 499 THR ASN ASP ILE ALA LEU ALA LYS ASN VAL ALA ALA PHE SEQRES 27 A 499 ILE ILE LEU ASN ASP GLY ILE PRO ILE ILE TYR ALA GLY SEQRES 28 A 499 GLN GLU GLN HIS TYR ALA GLY GLY ASN ASP PRO ALA ASN SEQRES 29 A 499 ARG GLU ALA THR TRP LEU SER GLY TYR PRO THR ASP SER SEQRES 30 A 499 GLU LEU TYR LYS LEU ILE ALA SER ALA ASN ALA ILE ARG SEQRES 31 A 499 ASN TYR ALA ILE SER LYS ASP THR GLY PHE VAL THR TYR SEQRES 32 A 499 LYS ASN TRP PRO ILE TYR LYS ASP ASP THR THR ILE ALA SEQRES 33 A 499 MET ARG LYS GLY THR ASP GLY SER GLN ILE VAL THR ILE SEQRES 34 A 499 LEU SER ASN LYS GLY ALA SER GLY ASP SER TYR THR LEU SEQRES 35 A 499 SER LEU SER GLY ALA GLY TYR THR ALA GLY GLN GLN LEU SEQRES 36 A 499 THR GLU VAL ILE GLY CYS THR THR VAL THR VAL GLY SER SEQRES 37 A 499 ASP GLY ASN VAL PRO VAL PRO MET ALA GLY GLY LEU PRO SEQRES 38 A 499 ARG VAL LEU TYR PRO THR GLU LYS LEU ALA GLY SER LYS SEQRES 39 A 499 ILE CYS SER SER SER HET NAG A 501 28 HET PLM A 502 49 HET MAN A 503 22 HET MAN A 504 21 HET MES A 505 25 HET CA A 506 1 HET PLM A 507 49 HET NAG A 508 22 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM PLM PALMITIC ACID HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 3 PLM 2(C16 H32 O2) FORMUL 4 MAN 2(C6 H12 O6) FORMUL 6 MES C6 H13 N O4 S FORMUL 7 CA CA 2+ FORMUL 10 HOH *513(H2 O) HELIX 1 AA1 THR A 2 ARG A 7 1 6 HELIX 2 AA2 LEU A 15 ALA A 20 1 6 HELIX 3 AA3 ASN A 31 GLN A 35 5 5 HELIX 4 AA4 THR A 41 LYS A 48 1 8 HELIX 5 AA5 LYS A 48 GLY A 54 1 7 HELIX 6 AA6 GLU A 92 GLY A 95 5 4 HELIX 7 AA7 THR A 96 ARG A 110 1 15 HELIX 8 AA8 ALA A 128 VAL A 132 5 5 HELIX 9 AA9 ASP A 133 PHE A 137 5 5 HELIX 10 AB1 SER A 142 PHE A 146 5 5 HELIX 11 AB2 ASP A 157 CYS A 164 1 8 HELIX 12 AB3 LYS A 180 SER A 199 1 20 HELIX 13 AB4 THR A 207 VAL A 211 5 5 HELIX 14 AB5 GLN A 212 ASP A 214 5 3 HELIX 15 AB6 PHE A 215 GLY A 224 1 10 HELIX 16 AB7 ASP A 235 CYS A 240 1 6 HELIX 17 AB8 PRO A 241 VAL A 245 5 5 HELIX 18 AB9 ASN A 251 LYS A 263 1 13 HELIX 19 AC1 SER A 268 CYS A 283 1 16 HELIX 20 AC2 ASP A 285 LEU A 288 5 4 HELIX 21 AC3 ARG A 300 THR A 305 1 6 HELIX 22 AC4 ASP A 307 ASN A 321 1 15 HELIX 23 AC5 GLY A 330 HIS A 334 5 5 HELIX 24 AC6 ALA A 346 GLY A 351 5 6 HELIX 25 AC7 SER A 356 ASP A 376 1 21 HELIX 26 AC8 GLU A 467 ALA A 470 5 4 SHEET 1 AA1 8 GLY A 248 VAL A 249 0 SHEET 2 AA1 8 TYR A 226 GLY A 229 1 N GLY A 229 O GLY A 248 SHEET 3 AA1 8 GLY A 202 ILE A 205 1 N LEU A 203 O ILE A 228 SHEET 4 AA1 8 TYR A 113 VAL A 118 1 N VAL A 118 O ARG A 204 SHEET 5 AA1 8 ALA A 59 ILE A 62 1 N ILE A 60 O MET A 115 SHEET 6 AA1 8 ILE A 11 LEU A 14 1 N LEU A 14 O TRP A 61 SHEET 7 AA1 8 ILE A 324 TYR A 328 1 O PRO A 325 N ILE A 11 SHEET 8 AA1 8 GLY A 290 THR A 291 1 N THR A 291 O ILE A 326 SHEET 1 AA2 2 THR A 66 GLN A 68 0 SHEET 2 AA2 2 GLN A 84 LEU A 90 -1 O GLN A 85 N ALA A 67 SHEET 1 AA3 3 TYR A 125 ASP A 126 0 SHEET 2 AA3 3 VAL A 171 LEU A 173 -1 O SER A 172 N TYR A 125 SHEET 3 AA3 3 LEU A 166 GLY A 167 -1 N LEU A 166 O LEU A 173 SHEET 1 AA4 6 TRP A 385 ASP A 390 0 SHEET 2 AA4 6 THR A 393 LYS A 398 -1 O ALA A 395 N TYR A 388 SHEET 3 AA4 6 ILE A 405 SER A 410 -1 O LEU A 409 N ILE A 394 SHEET 4 AA4 6 ARG A 461 PRO A 465 -1 O LEU A 463 N VAL A 406 SHEET 5 AA4 6 GLN A 433 GLU A 436 -1 N THR A 435 O TYR A 464 SHEET 6 AA4 6 THR A 441 THR A 444 -1 O VAL A 443 N LEU A 434 SHEET 1 AA5 2 TYR A 419 LEU A 423 0 SHEET 2 AA5 2 VAL A 451 MET A 455 -1 O VAL A 453 N LEU A 421 SSBOND 1 CYS A 30 CYS A 38 1555 1555 2.08 SSBOND 2 CYS A 150 CYS A 164 1555 1555 2.07 SSBOND 3 CYS A 240 CYS A 283 1555 1555 2.01 SSBOND 4 CYS A 440 CYS A 475 1555 1555 2.06 LINK ND2 ASN A 197 C1 NAG A 501 1555 1555 1.43 LINK OD1 ASN A 121 CA CA A 506 1555 1555 2.35 LINK O GLU A 162 CA CA A 506 1555 1555 2.46 LINK OD1 ASP A 175 CA CA A 506 1555 1555 2.63 LINK OD2 ASP A 175 CA CA A 506 1555 1555 2.47 LINK O HIS A 210 CA CA A 506 1555 1555 2.36 LINK CA CA A 506 O HOH A 738 1555 1555 2.50 LINK CA CA A 506 O HOH A 781 1555 1555 2.41 LINK CA CA A 506 O HOH A 842 1555 1555 2.55 CISPEP 1 LYS A 138 PRO A 139 0 4.25 CISPEP 2 ASP A 340 PRO A 341 0 12.94 CRYST1 63.126 63.126 265.812 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015841 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015841 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003762 0.00000