HEADER TRANSFERASE 16-JAN-20 6XTQ TITLE CRYSTAL STRUCTURE REVEALS NON-COORDINATIVE BINDING OF O2 TO THE COPPER TITLE 2 CENTER OF THE FORMYLGLYCINE-GENERATING ENZYME - FGE:CU:S:O2-1B TITLE 3 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMYLGLYCINE-GENERATING ENZYME; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FGE; COMPND 5 EC: 1.8.3.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ABZ-ALA-THR-THR-PRO-LEU-CYS-GLY-PRO-SER-ARG-ALA-SER-ILE- COMPND 9 LEU-SER-GLY; COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOMONOSPORA CURVATA (STRAIN ATCC 19995 / SOURCE 3 DSM 43183 / JCM 3096 / NBRC 15933 / NCIMB 10081 / HENSSEN B9); SOURCE 4 ORGANISM_TAXID: 471852; SOURCE 5 GENE: TCUR_4811; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET19; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: THERMOMONOSPORA CURVATA DSM 43183; SOURCE 14 ORGANISM_TAXID: 471852; SOURCE 15 OTHER_DETAILS: MODIFIED SULFATASE SEQUENCE MOTIF KEYWDS FORMYLGLYCINE-GENERATING ENZYME, COMPLEX, SUBSTRATE ANALOG, COPPER, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.LEISINGER,F.P.SEEBECK REVDAT 3 24-JAN-24 6XTQ 1 REMARK REVDAT 2 11-AUG-21 6XTQ 1 JRNL REMARK REVDAT 1 27-JAN-21 6XTQ 0 JRNL AUTH F.LEISINGER,D.A.MIARZLOU,F.P.SEEBECK JRNL TITL NON-COORDINATIVE BINDING OF O2 AT THE ACTIVE CENTER OF A JRNL TITL 2 COPPER-DEPENDENT ENZYME JRNL REF ANGEW.CHEM.INT.ED.ENGL. 2020 JRNL REFN ESSN 1521-3773 JRNL DOI 10.1002/ANGE.202014981 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 61614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 3158 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8490 - 3.9806 1.00 2728 156 0.1690 0.1720 REMARK 3 2 3.9806 - 3.1597 1.00 2637 120 0.1548 0.1862 REMARK 3 3 3.1597 - 2.7604 1.00 2572 158 0.1853 0.2030 REMARK 3 4 2.7604 - 2.5080 1.00 2555 143 0.1870 0.2002 REMARK 3 5 2.5080 - 2.3283 1.00 2578 132 0.1836 0.2270 REMARK 3 6 2.3283 - 2.1910 1.00 2528 150 0.1698 0.1685 REMARK 3 7 2.1910 - 2.0813 1.00 2537 139 0.1691 0.1887 REMARK 3 8 2.0813 - 1.9907 1.00 2558 131 0.1647 0.1760 REMARK 3 9 1.9907 - 1.9140 1.00 2524 125 0.1724 0.1966 REMARK 3 10 1.9140 - 1.8480 1.00 2537 147 0.1778 0.2091 REMARK 3 11 1.8480 - 1.7902 1.00 2536 120 0.1827 0.1964 REMARK 3 12 1.7902 - 1.7390 1.00 2519 144 0.1841 0.2029 REMARK 3 13 1.7390 - 1.6932 1.00 2505 139 0.1794 0.1902 REMARK 3 14 1.6932 - 1.6519 1.00 2554 123 0.1844 0.2109 REMARK 3 15 1.6519 - 1.6144 1.00 2494 137 0.1864 0.2171 REMARK 3 16 1.6144 - 1.5800 1.00 2509 142 0.1944 0.2152 REMARK 3 17 1.5800 - 1.5484 1.00 2518 152 0.2034 0.2445 REMARK 3 18 1.5484 - 1.5192 1.00 2499 125 0.2063 0.2425 REMARK 3 19 1.5192 - 1.4921 1.00 2522 141 0.2280 0.2945 REMARK 3 20 1.4921 - 1.4668 1.00 2520 130 0.2280 0.2521 REMARK 3 21 1.4668 - 1.4431 1.00 2498 130 0.2410 0.2699 REMARK 3 22 1.4431 - 1.4209 1.00 2503 136 0.2500 0.2684 REMARK 3 23 1.4209 - 1.4000 1.00 2525 138 0.2417 0.2759 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2541 REMARK 3 ANGLE : 1.004 3480 REMARK 3 CHIRALITY : 0.287 348 REMARK 3 PLANARITY : 0.007 472 REMARK 3 DIHEDRAL : 15.224 887 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XTQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292105790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0006777109999108 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61695 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 45.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.30 REMARK 200 R MERGE FOR SHELL (I) : 0.85800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6S07 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7-12 % PEG 8000, 0.2-0.3 M MGCL2, TRIS REMARK 280 -HCL, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.95450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.52850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.49750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.52850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.95450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.49750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -73.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 0 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASP A 5 OD1 REMARK 480 ARG A 10 CZ NH1 NH2 REMARK 480 GLU A 15 CD REMARK 480 LYS A 18 CD REMARK 480 GLU A 33 CD REMARK 480 ARG A 58 CZ REMARK 480 LYS A 71 CE NZ REMARK 480 GLU A 105 CG CD OE1 OE2 REMARK 480 GLU A 201 CG CD OE1 REMARK 480 ARG A 252 CD NE CZ NH1 NH2 REMARK 480 GLU A 255 CD OE1 OE2 REMARK 480 GLU A 271 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 MG MG A 409 O HOH A 612 1.52 REMARK 500 NH1 ARG A 182 O HOH A 501 1.68 REMARK 500 O HOH A 649 O HOH A 718 1.90 REMARK 500 O HOH A 560 O HOH A 683 1.92 REMARK 500 OE2 GLU A 105 O HOH A 502 2.03 REMARK 500 O HOH C 205 O HOH C 210 2.09 REMARK 500 O HOH A 662 O HOH A 718 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 MG MG A 409 O HOH A 643 3454 1.53 REMARK 500 O HOH A 612 O HOH A 643 3454 2.15 REMARK 500 O HOH A 642 O HOH A 656 3544 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 152 -157.14 -130.61 REMARK 500 ILE A 189 -167.28 -128.92 REMARK 500 PHE A 213 179.11 63.96 REMARK 500 ASN A 226 -85.31 75.08 REMARK 500 TYR A 273 -76.63 -110.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 409 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 94 O REMARK 620 2 HOH A 587 O 87.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 188 OD1 REMARK 620 2 ILE A 189 O 102.2 REMARK 620 3 ASP A 202 OD1 90.8 122.6 REMARK 620 4 ASP A 202 OD2 90.0 72.0 52.0 REMARK 620 5 TYR A 204 O 95.8 150.6 79.6 131.4 REMARK 620 6 HOH A 527 O 174.7 83.0 86.5 91.9 79.3 REMARK 620 7 HOH A 563 O 92.4 75.8 160.1 147.5 80.5 88.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 223 O REMARK 620 2 GLY A 225 O 109.3 REMARK 620 3 VAL A 227 O 158.8 91.6 REMARK 620 4 GLY A 265 O 116.2 72.8 65.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 269 SG REMARK 620 2 CYS A 274 SG 108.8 REMARK 620 3 CYS C 7 SG 146.0 105.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 407 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 591 O REMARK 620 2 HOH A 639 O 89.9 REMARK 620 3 HOH A 727 O 89.6 98.2 REMARK 620 4 HOH A 735 O 87.1 88.3 172.8 REMARK 620 5 HOH A 736 O 95.7 170.2 89.9 84.1 REMARK 620 6 HOH A 741 O 168.4 81.9 83.5 100.8 93.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 408 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 510 O REMARK 620 2 HOH A 701 O 90.4 REMARK 620 3 HOH A 702 O 92.4 90.5 REMARK 620 4 HOH A 712 O 93.5 90.7 173.9 REMARK 620 5 HOH A 722 O 174.8 93.1 91.4 82.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 410 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 650 O REMARK 620 2 HOH A 693 O 103.2 REMARK 620 3 HOH A 717 O 97.6 88.0 REMARK 620 4 HOH A 719 O 100.0 85.6 162.3 REMARK 620 5 HOH A 721 O 174.3 78.6 87.8 74.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU1 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OXY A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SOA C 101 DBREF 6XTQ A 1 302 UNP D1A7C3 FGE_THECD 1 302 DBREF 6XTQ C 2 15 PDB 6XTQ 6XTQ 2 15 SEQADV 6XTQ HIS A 0 UNP D1A7C3 EXPRESSION TAG SEQRES 1 A 303 HIS MET PRO SER PHE ASP PHE ASP ILE PRO ARG ARG SER SEQRES 2 A 303 PRO GLN GLU ILE ALA LYS GLY MET VAL ALA ILE PRO GLY SEQRES 3 A 303 GLY THR PHE ARG MET GLY GLY GLU ASP PRO ASP ALA PHE SEQRES 4 A 303 PRO GLU ASP GLY GLU GLY PRO VAL ARG THR VAL ARG LEU SEQRES 5 A 303 SER PRO PHE LEU ILE ASP ARG TYR ALA VAL SER ASN ARG SEQRES 6 A 303 GLN PHE ALA ALA PHE VAL LYS ALA THR GLY TYR VAL THR SEQRES 7 A 303 ASP ALA GLU ARG TYR GLY TRP SER PHE VAL PHE HIS ALA SEQRES 8 A 303 HIS VAL ALA PRO GLY THR PRO VAL MET ASP ALA VAL VAL SEQRES 9 A 303 PRO GLU ALA PRO TRP TRP VAL ALA VAL PRO GLY ALA TYR SEQRES 10 A 303 TRP LYS ALA PRO GLU GLY PRO GLY SER SER ILE THR ASP SEQRES 11 A 303 ARG PRO ASN HIS PRO VAL VAL HIS VAL SER TRP ASN ASP SEQRES 12 A 303 ALA VAL ALA TYR ALA THR TRP ALA GLY LYS ARG LEU PRO SEQRES 13 A 303 THR GLU ALA GLU TRP GLU MET ALA ALA ARG GLY GLY LEU SEQRES 14 A 303 ASP GLN ALA ARG TYR PRO TRP GLY ASN GLU LEU THR PRO SEQRES 15 A 303 ARG GLY ARG HIS ARG CYS ASN ILE TRP GLN GLY THR PHE SEQRES 16 A 303 PRO VAL HIS ASP THR GLY GLU ASP GLY TYR THR GLY THR SEQRES 17 A 303 ALA PRO VAL ASN ALA PHE ALA PRO ASN GLY TYR GLY LEU SEQRES 18 A 303 TYR ASN VAL ALA GLY ASN VAL TRP GLU TRP CYS ALA ASP SEQRES 19 A 303 TRP TRP SER ALA ASP TRP HIS ALA THR GLU SER PRO ALA SEQRES 20 A 303 THR ARG ILE ASP PRO ARG GLY PRO GLU THR GLY THR ALA SEQRES 21 A 303 ARG VAL THR LYS GLY GLY SER PHE LEU CYS HIS GLU SER SEQRES 22 A 303 TYR CYS ASN ARG TYR ARG VAL ALA ALA ARG THR CYS ASN SEQRES 23 A 303 THR PRO ASP SER SER ALA ALA HIS THR GLY PHE ARG CYS SEQRES 24 A 303 ALA ALA ASP PRO SEQRES 1 C 14 ALA THR THR PRO LEU CYS GLY PRO SER ARG ALA SER ILE SEQRES 2 C 14 LEU HET CU1 A 401 1 HET CA A 402 1 HET CA A 403 1 HET OXY A 404 2 HET CL A 405 1 HET CL A 406 1 HET MG A 407 1 HET MG A 408 1 HET MG A 409 1 HET MG A 410 1 HET SOA C 101 9 HETNAM CU1 COPPER (I) ION HETNAM CA CALCIUM ION HETNAM OXY OXYGEN MOLECULE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM SOA ISATOIC ANHYDRIDE FORMUL 3 CU1 CU 1+ FORMUL 4 CA 2(CA 2+) FORMUL 6 OXY O2 FORMUL 7 CL 2(CL 1-) FORMUL 9 MG 4(MG 2+) FORMUL 13 SOA C7 H9 N O FORMUL 14 HOH *251(H2 O) HELIX 1 AA1 SER A 12 LYS A 18 1 7 HELIX 2 AA2 PHE A 38 GLY A 42 5 5 HELIX 3 AA3 SER A 62 GLY A 74 1 13 HELIX 4 AA4 THR A 77 GLY A 83 1 7 HELIX 5 AA5 ALA A 90 VAL A 92 5 3 HELIX 6 AA6 SER A 139 ALA A 150 1 12 HELIX 7 AA7 THR A 156 GLY A 166 1 11 HELIX 8 AA8 THR A 180 ARG A 184 5 5 HELIX 9 AA9 ASP A 238 THR A 242 5 5 HELIX 10 AB1 SER A 244 ILE A 249 1 6 HELIX 11 AB2 SER C 10 LEU C 15 1 6 SHEET 1 AA1 3 MET A 20 ILE A 23 0 SHEET 2 AA1 3 PHE A 54 ASP A 57 -1 O PHE A 54 N ILE A 23 SHEET 3 AA1 3 ALA A 299 ALA A 300 -1 O ALA A 300 N LEU A 55 SHEET 1 AA2 2 GLY A 26 MET A 30 0 SHEET 2 AA2 2 ARG A 47 LEU A 51 -1 O LEU A 51 N GLY A 26 SHEET 1 AA3 2 TRP A 84 PHE A 88 0 SHEET 2 AA3 2 TRP A 109 PRO A 113 -1 O VAL A 112 N SER A 85 SHEET 1 AA4 2 GLY A 192 THR A 193 0 SHEET 2 AA4 2 HIS A 197 ASP A 198 -1 O HIS A 197 N THR A 193 SHEET 1 AA5 4 THR A 283 ASN A 285 0 SHEET 2 AA5 4 ARG A 260 LYS A 263 -1 N ARG A 260 O ASN A 285 SHEET 3 AA5 4 TRP A 228 TRP A 234 -1 N CYS A 231 O VAL A 261 SHEET 4 AA5 4 THR A 294 GLY A 295 1 O GLY A 295 N TRP A 228 LINK N ALA C 2 C12 SOA C 101 1555 1555 1.40 LINK O PRO A 94 MG MG A 409 1555 3444 2.45 LINK OD1 ASN A 188 CA CA A 403 1555 1555 2.32 LINK O ILE A 189 CA CA A 403 1555 1555 2.34 LINK OD1 ASP A 202 CA CA A 403 1555 1555 2.44 LINK OD2 ASP A 202 CA CA A 403 1555 1555 2.48 LINK O TYR A 204 CA CA A 403 1555 1555 2.29 LINK O VAL A 223 CA CA A 402 1555 1555 2.84 LINK O GLY A 225 CA CA A 402 1555 1555 2.50 LINK O VAL A 227 CA CA A 402 1555 1555 2.50 LINK O GLY A 265 CA CA A 402 1555 1555 3.08 LINK SG CYS A 269 CU CU1 A 401 1555 1555 2.23 LINK SG CYS A 274 CU CU1 A 401 1555 1555 2.29 LINK CU CU1 A 401 SG CYS C 7 1555 1555 2.24 LINK CA CA A 403 O HOH A 527 1555 1555 2.33 LINK CA CA A 403 O HOH A 563 1555 1555 2.41 LINK MG MG A 407 O HOH A 591 1555 1555 2.05 LINK MG MG A 407 O HOH A 639 1555 1555 2.13 LINK MG MG A 407 O HOH A 727 1555 1555 2.18 LINK MG MG A 407 O HOH A 735 1555 1555 2.07 LINK MG MG A 407 O HOH A 736 1555 1555 2.33 LINK MG MG A 407 O HOH A 741 1555 1555 2.05 LINK MG MG A 408 O HOH A 510 1555 1555 2.11 LINK MG MG A 408 O HOH A 701 1555 1555 2.06 LINK MG MG A 408 O HOH A 702 1555 1555 1.95 LINK MG MG A 408 O HOH A 712 1555 1555 2.09 LINK MG MG A 408 O HOH A 722 1555 1555 2.11 LINK MG MG A 409 O HOH A 587 1555 1555 2.17 LINK MG MG A 410 O HOH A 650 1555 1555 1.82 LINK MG MG A 410 O HOH A 693 1555 1555 2.32 LINK MG MG A 410 O HOH A 717 1555 1555 2.18 LINK MG MG A 410 O HOH A 719 1555 1555 1.79 LINK MG MG A 410 O HOH A 721 1555 1555 1.89 CISPEP 1 GLY A 44 PRO A 45 0 -2.72 CISPEP 2 PHE A 194 PRO A 195 0 1.23 SITE 1 AC1 4 CYS A 269 CYS A 274 OXY A 404 CYS C 7 SITE 1 AC2 7 ASN A 222 VAL A 223 GLY A 225 VAL A 227 SITE 2 AC2 7 GLU A 229 GLY A 264 GLY A 265 SITE 1 AC3 6 ASN A 188 ILE A 189 ASP A 202 TYR A 204 SITE 2 AC3 6 HOH A 527 HOH A 563 SITE 1 AC4 8 TRP A 228 SER A 266 LEU A 268 CYS A 269 SITE 2 AC4 8 HIS A 293 CU1 A 401 HOH A 509 CYS C 7 SITE 1 AC5 3 PRO A 131 ASN A 132 HIS A 133 SITE 1 AC6 3 ARG A 278 HOH A 506 HOH A 633 SITE 1 AC7 6 HOH A 591 HOH A 639 HOH A 727 HOH A 735 SITE 2 AC7 6 HOH A 736 HOH A 741 SITE 1 AC8 5 HOH A 510 HOH A 701 HOH A 702 HOH A 712 SITE 2 AC8 5 HOH A 722 SITE 1 AC9 4 PRO A 94 HOH A 587 HOH A 612 HOH A 643 SITE 1 AD1 5 HOH A 650 HOH A 693 HOH A 717 HOH A 719 SITE 2 AD1 5 HOH A 721 SITE 1 AD2 5 ARG A 248 ILE A 249 ALA C 2 THR C 3 SITE 2 AD2 5 HOH C 203 CRYST1 57.909 70.995 75.057 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017268 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014085 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013323 0.00000