HEADER CELL ADHESION 22-JAN-20 6XVT TITLE ENAH EVH1 IN COMPLEX WITH AC-[2-CL-F]-PPPPTEDDL-NH2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ENABLED HOMOLOG; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: S0A, Q4A, E95A ARE MUTATED FOR MODELLING AS ONLY THE COMPND 6 BACKBONE WAS VISIBLE; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ACY-SC1-SC2-SC3-SC4-SC5-NME; COMPND 9 CHAIN: G, H; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ENAH, MENA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX-4T-1; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630 KEYWDS PROLINE-RICH MOTIF, ACTA, ENA/VASP INHIBITOR, ACTIN, PROTEIN-PROTEIN KEYWDS 2 INTERACTION, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR M.BARONE,K.LE CONG,Y.ROSKE REVDAT 9 07-FEB-24 6XVT 1 REMARK REVDAT 8 15-NOV-23 6XVT 1 LINK ATOM REVDAT 7 19-JUL-23 6XVT 1 COMPND SOURCE REMARK DBREF REVDAT 7 2 1 SEQRES HET HETNAM FORMUL REVDAT 7 3 1 LINK SITE ATOM REVDAT 6 26-OCT-22 6XVT 1 JRNL REVDAT 5 17-FEB-21 6XVT 1 JRNL REVDAT 4 10-FEB-21 6XVT 1 JRNL REVDAT 3 02-DEC-20 6XVT 1 JRNL REVDAT 2 25-NOV-20 6XVT 1 JRNL REVDAT 1 18-MAR-20 6XVT 0 JRNL AUTH M.BARONE,M.MULLER,S.CHIHA,J.REN,D.ALBAT,A.SOICKE,S.DOHMEN, JRNL AUTH 2 M.KLEIN,J.BRUNS,M.VAN DINTHER,R.OPITZ,P.LINDEMANN, JRNL AUTH 3 M.BEERBAUM,K.MOTZNY,Y.ROSKE,P.SCHMIEDER,R.VOLKMER,M.NAZARE, JRNL AUTH 4 U.HEINEMANN,H.OSCHKINAT,P.TEN DIJKE,H.G.SCHMALZ,R.KUHNE JRNL TITL DESIGNED NANOMOLAR SMALL-MOLECULE INHIBITORS OF ENA/VASP JRNL TITL 2 EVH1 INTERACTION IMPAIR INVASION AND EXTRAVASATION OF BREAST JRNL TITL 3 CANCER CELLS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 29684 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 33184177 JRNL DOI 10.1073/PNAS.2007213117 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.OPITZ,M.MUELLER,C.REUTER,M.BARONE,A.SOICKE,Y.ROSKE, REMARK 1 AUTH 2 K.PIOTUKH,P.HUY,M.BEERBAUM,B.WIESNER,M.BEYERMANN, REMARK 1 AUTH 3 P.SCHMIEDER,C.FREUND,R.VOLKMER,H.OSCHKINAT,H.G.SCHMALZ, REMARK 1 AUTH 4 R.KUEHNE REMARK 1 TITL A MODULAR TOOLKIT TO INHIBIT PROLINE-RICH MOTIF-MEDIATED REMARK 1 TITL 2 PROTEIN-PROTEIN INTERACTIONS. REMARK 1 REF PROC. NATL. ACAD. SCI. V. 112 5011 2015 REMARK 1 REF 2 U.S.A. REMARK 1 REFN ESSN 1091-6490 REMARK 1 PMID 25848013 REMARK 1 DOI 10.1073/PNAS.1422054112 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.930 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 42209 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.6000 - 3.4500 0.97 2697 142 0.1733 0.1914 REMARK 3 2 3.4500 - 2.7400 0.97 2710 143 0.1860 0.2212 REMARK 3 3 2.7400 - 2.3900 0.97 2686 142 0.1898 0.2379 REMARK 3 4 2.3900 - 2.1700 0.98 2716 142 0.1844 0.2123 REMARK 3 5 2.1700 - 2.0200 0.98 2706 142 0.1894 0.2249 REMARK 3 6 2.0200 - 1.9000 0.96 2673 141 0.1842 0.2059 REMARK 3 7 1.9000 - 1.8000 0.97 2676 140 0.1996 0.2020 REMARK 3 8 1.8000 - 1.7300 0.96 2673 141 0.2115 0.2742 REMARK 3 9 1.7300 - 1.6600 0.96 2668 141 0.2272 0.2548 REMARK 3 10 1.6600 - 1.6000 0.96 2689 141 0.2435 0.2832 REMARK 3 11 1.6000 - 1.5500 0.96 2666 141 0.2598 0.2829 REMARK 3 12 1.5500 - 1.5100 0.93 2565 135 0.2772 0.3059 REMARK 3 13 1.5100 - 1.4700 0.96 2659 140 0.3109 0.3697 REMARK 3 14 1.4700 - 1.4300 0.95 2642 139 0.3339 0.3341 REMARK 3 15 1.4300 - 1.4000 0.96 2673 140 0.3854 0.3746 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.204 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.345 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2005 REMARK 3 ANGLE : 1.632 2722 REMARK 3 CHIRALITY : 0.096 277 REMARK 3 PLANARITY : 0.005 362 REMARK 3 DIHEDRAL : 6.056 1288 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 0 THROUGH 111) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2821 8.4636 -4.4333 REMARK 3 T TENSOR REMARK 3 T11: 0.0899 T22: 0.1296 REMARK 3 T33: 0.1402 T12: 0.0050 REMARK 3 T13: 0.0028 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 2.3444 L22: 0.9629 REMARK 3 L33: 2.5675 L12: 0.2403 REMARK 3 L13: -0.3373 L23: -0.0465 REMARK 3 S TENSOR REMARK 3 S11: -0.0101 S12: 0.1447 S13: -0.1246 REMARK 3 S21: -0.0005 S22: 0.0156 S23: -0.0116 REMARK 3 S31: -0.0049 S32: -0.0631 S33: -0.0011 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 3 THROUGH 111) REMARK 3 ORIGIN FOR THE GROUP (A): -27.1427 -2.7952 14.2424 REMARK 3 T TENSOR REMARK 3 T11: 0.1014 T22: 0.1827 REMARK 3 T33: 0.1310 T12: 0.0123 REMARK 3 T13: 0.0053 T23: 0.0416 REMARK 3 L TENSOR REMARK 3 L11: 2.4490 L22: 2.4261 REMARK 3 L33: 1.9164 L12: -0.2979 REMARK 3 L13: -0.3971 L23: -1.1600 REMARK 3 S TENSOR REMARK 3 S11: 0.0486 S12: 0.1583 S13: -0.1170 REMARK 3 S21: -0.0313 S22: -0.0961 S23: -0.0069 REMARK 3 S31: 0.0039 S32: 0.0373 S33: 0.0405 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN 'A' AND (RESID 3 OR RESID 5 REMARK 3 THROUGH 9 OR RESID 11 THROUGH 13 OR RESID REMARK 3 15 THROUGH 17 OR RESID 19 THROUGH 20 OR REMARK 3 RESID 22 THROUGH 28 OR RESID 30 THROUGH REMARK 3 50 OR RESID 53 THROUGH 61 OR RESID 63 REMARK 3 THROUGH 84 OR RESID 86 THROUGH 94 OR REMARK 3 RESID 96 THROUGH 101 OR RESID 103 OR REMARK 3 RESID 105 THROUGH 110 OR (RESID 111 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB OR NAME CG OR NAME CD1 OR NAME REMARK 3 CD2)))) REMARK 3 SELECTION : (CHAIN 'B' AND (RESID 3 OR RESID 5 REMARK 3 THROUGH 9 OR RESID 11 THROUGH 13 OR RESID REMARK 3 15 THROUGH 17 OR RESID 19 THROUGH 20 OR REMARK 3 RESID 22 THROUGH 28 OR RESID 30 THROUGH REMARK 3 50 OR RESID 53 THROUGH 61 OR RESID 63 REMARK 3 THROUGH 84 OR RESID 86 THROUGH 94 OR REMARK 3 RESID 96 THROUGH 101 OR RESID 103 OR REMARK 3 RESID 105 THROUGH 111)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XVT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106351. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42224 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 38.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5NCG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.07M AMSO4, 300MM LINO3, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 0 OG REMARK 470 GLN A 4 CG CD OE1 NE2 REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 340 O HOH A 342 1455 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO G 3 CA PRO G 3 C -0.130 REMARK 500 PRO G 4 CA PRO G 4 C -0.121 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO G 3 CB - CA - C ANGL. DEV. = -15.1 DEGREES REMARK 500 PRO G 4 CA - N - CD ANGL. DEV. = -9.8 DEGREES REMARK 500 PRO G 5 CA - CB - CG ANGL. DEV. = -11.8 DEGREES REMARK 500 PRO H 3 CA - N - CD ANGL. DEV. = -8.4 DEGREES REMARK 500 PRO H 5 C - N - CA ANGL. DEV. = 10.0 DEGREES REMARK 500 PRO H 5 CA - N - CD ANGL. DEV. = -10.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 83.09 -159.83 REMARK 500 ASN A 61 88.03 -159.83 REMARK 500 ASP A 82 -168.54 -129.65 REMARK 500 ASN B 61 84.18 -157.76 REMARK 500 ASN B 61 87.34 -157.76 REMARK 500 ASP B 82 -169.07 -124.94 REMARK 500 PRO G 5 152.53 -43.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues ACY G 1 and 2L5 G 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 2L5 G 2 and PRO G 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO G 6 and NME G 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues ACY H 1 and 2L5 H 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 2L5 H 2 and PRO H 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PRO H 6 and NME H 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5NC2 RELATED DB: PDB REMARK 900 5NC2 IS THE COMPLEX STRUCTURE OF WT ACTA DBREF 6XVT A 1 111 UNP Q8N8S7 ENAH_HUMAN 1 111 DBREF 6XVT B 1 111 UNP Q8N8S7 ENAH_HUMAN 1 111 DBREF 6XVT G 1 6 PDB 6XVT 6XVT 1 6 DBREF 6XVT H 1 6 PDB 6XVT 6XVT 1 6 SEQADV 6XVT GLY A -1 UNP Q8N8S7 EXPRESSION TAG SEQADV 6XVT SER A 0 UNP Q8N8S7 EXPRESSION TAG SEQADV 6XVT GLY B -1 UNP Q8N8S7 EXPRESSION TAG SEQADV 6XVT SER B 0 UNP Q8N8S7 EXPRESSION TAG SEQRES 1 A 113 GLY SER MET SER GLU GLN SER ILE CYS GLN ALA ARG ALA SEQRES 2 A 113 ALA VAL MET VAL TYR ASP ASP ALA ASN LYS LYS TRP VAL SEQRES 3 A 113 PRO ALA GLY GLY SER THR GLY PHE SER ARG VAL HIS ILE SEQRES 4 A 113 TYR HIS HIS THR GLY ASN ASN THR PHE ARG VAL VAL GLY SEQRES 5 A 113 ARG LYS ILE GLN ASP HIS GLN VAL VAL ILE ASN CYS ALA SEQRES 6 A 113 ILE PRO LYS GLY LEU LYS TYR ASN GLN ALA THR GLN THR SEQRES 7 A 113 PHE HIS GLN TRP ARG ASP ALA ARG GLN VAL TYR GLY LEU SEQRES 8 A 113 ASN PHE GLY SER LYS GLU ASP ALA ASN VAL PHE ALA SER SEQRES 9 A 113 ALA MET MET HIS ALA LEU GLU VAL LEU SEQRES 1 B 113 GLY SER MET SER GLU GLN SER ILE CYS GLN ALA ARG ALA SEQRES 2 B 113 ALA VAL MET VAL TYR ASP ASP ALA ASN LYS LYS TRP VAL SEQRES 3 B 113 PRO ALA GLY GLY SER THR GLY PHE SER ARG VAL HIS ILE SEQRES 4 B 113 TYR HIS HIS THR GLY ASN ASN THR PHE ARG VAL VAL GLY SEQRES 5 B 113 ARG LYS ILE GLN ASP HIS GLN VAL VAL ILE ASN CYS ALA SEQRES 6 B 113 ILE PRO LYS GLY LEU LYS TYR ASN GLN ALA THR GLN THR SEQRES 7 B 113 PHE HIS GLN TRP ARG ASP ALA ARG GLN VAL TYR GLY LEU SEQRES 8 B 113 ASN PHE GLY SER LYS GLU ASP ALA ASN VAL PHE ALA SER SEQRES 9 B 113 ALA MET MET HIS ALA LEU GLU VAL LEU SEQRES 1 G 6 ACE 2L5 PRO PRO PRO 9PR SEQRES 1 H 6 ACE 2L5 PRO PRO PRO 9PR HET ACE G 1 6 HET 2L5 G 2 20 HET 9PR G 6 18 HET ACE H 1 6 HET 2L5 H 2 20 HET 9PR H 6 18 HET NO3 A 201 8 HET SO4 A 202 5 HET NO3 B 201 8 HET NO3 B 202 8 HET NO3 B 203 4 HET NO3 B 204 8 HETNAM ACE ACETYL GROUP HETNAM 2L5 2-CHLORO-L-PHENYLALANINE HETNAM 9PR N-METHYL-L-PROLINAMIDE HETNAM NO3 NITRATE ION HETNAM SO4 SULFATE ION FORMUL 3 ACE 2(C2 H4 O) FORMUL 3 2L5 2(C9 H10 CL N O2) FORMUL 3 9PR 2(C6 H12 N2 O) FORMUL 5 NO3 5(N O3 1-) FORMUL 6 SO4 O4 S 2- FORMUL 11 HOH *140(H2 O) HELIX 1 AA1 GLY A 27 SER A 29 5 3 HELIX 2 AA2 SER A 93 LEU A 111 1 19 HELIX 3 AA3 GLY B 27 SER B 29 5 3 HELIX 4 AA4 SER B 93 LEU B 111 1 19 SHEET 1 AA1 5 LYS A 22 PRO A 25 0 SHEET 2 AA1 5 GLU A 3 ASP A 17 -1 N ASP A 17 O LYS A 22 SHEET 3 AA1 5 PHE A 32 HIS A 40 -1 O VAL A 35 N ALA A 9 SHEET 4 AA1 5 THR A 45 LYS A 52 -1 O VAL A 49 N HIS A 36 SHEET 5 AA1 5 VAL A 58 ALA A 63 -1 O CYS A 62 N VAL A 48 SHEET 1 AA2 5 LYS A 22 PRO A 25 0 SHEET 2 AA2 5 GLU A 3 ASP A 17 -1 N ASP A 17 O LYS A 22 SHEET 3 AA2 5 VAL A 86 PHE A 91 -1 O GLY A 88 N MET A 14 SHEET 4 AA2 5 PHE A 77 ARG A 81 -1 N HIS A 78 O LEU A 89 SHEET 5 AA2 5 ASN A 71 GLN A 72 -1 N ASN A 71 O GLN A 79 SHEET 1 AA3 5 LYS B 22 PRO B 25 0 SHEET 2 AA3 5 GLN B 4 ASP B 17 -1 N ASP B 17 O LYS B 22 SHEET 3 AA3 5 SER B 33 HIS B 40 -1 O VAL B 35 N ALA B 9 SHEET 4 AA3 5 THR B 45 LYS B 52 -1 O VAL B 49 N HIS B 36 SHEET 5 AA3 5 VAL B 58 ALA B 63 -1 O CYS B 62 N VAL B 48 SHEET 1 AA4 5 LYS B 22 PRO B 25 0 SHEET 2 AA4 5 GLN B 4 ASP B 17 -1 N ASP B 17 O LYS B 22 SHEET 3 AA4 5 VAL B 86 PHE B 91 -1 O GLY B 88 N MET B 14 SHEET 4 AA4 5 PHE B 77 ARG B 81 -1 N HIS B 78 O LEU B 89 SHEET 5 AA4 5 ASN B 71 GLN B 72 -1 N ASN B 71 O GLN B 79 LINK C ACE G 1 N 2L5 G 2 1555 1555 1.34 LINK C 2L5 G 2 N PRO G 3 1555 1555 1.33 LINK C PRO G 5 N 9PR G 6 1555 1555 1.33 LINK C ACE H 1 N 2L5 H 2 1555 1555 1.34 LINK C 2L5 H 2 N PRO H 3 1555 1555 1.34 LINK C PRO H 5 N 9PR H 6 1555 1555 1.36 SITE 1 AC1 7 GLN A 8 ALA A 9 ARG A 10 ARG A 34 SITE 2 AC1 7 ARG B 10 ARG B 34 NO3 B 201 SITE 1 AC2 7 ARG A 34 HIS A 36 ARG A 51 HOH A 316 SITE 2 AC2 7 HOH A 317 HOH A 329 HOH A 349 SITE 1 AC3 7 ARG A 10 ARG A 34 NO3 A 201 GLN B 8 SITE 2 AC3 7 ALA B 9 ARG B 10 ARG B 34 SITE 1 AC4 6 ARG B 34 HIS B 36 ARG B 51 HOH B 307 SITE 2 AC4 6 HOH B 313 HOH B 320 SITE 1 AC5 2 THR B 74 GLN B 75 SITE 1 AC6 3 GLY B 27 VAL B 58 VAL B 59 SITE 1 AC7 5 GLN A 79 ARG A 81 TYR B 16 PRO G 3 SITE 2 AC7 5 HOH H 102 SITE 1 AC8 7 TRP A 23 GLN A 79 ARG A 81 ACE G 1 SITE 2 AC8 7 PRO G 4 PRO G 5 HOH H 102 SITE 1 AC9 4 TRP A 23 PHE A 77 PRO G 4 PRO G 5 SITE 1 AD1 9 TYR A 16 ASP A 18 LYS A 21 LYS B 69 SITE 2 AD1 9 GLN B 79 ARG B 81 VAL B 86 PRO H 3 SITE 3 AD1 9 HOH H 102 SITE 1 AD2 11 ASP A 18 LYS A 21 TYR B 16 LYS B 69 SITE 2 AD2 11 GLN B 79 ARG B 81 VAL B 86 ACE H 1 SITE 3 AD2 11 PRO H 4 PRO H 5 HOH H 102 SITE 1 AD3 5 SER A 0 MET A 1 TRP B 23 PHE B 77 SITE 2 AD3 5 PRO H 5 CRYST1 34.650 44.280 43.160 60.85 84.04 84.01 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028860 -0.003031 -0.001774 0.00000 SCALE2 0.000000 0.022708 -0.012475 0.00000 SCALE3 0.000000 0.000000 0.026579 0.00000