HEADER VIRAL PROTEIN 23-JAN-20 6XW7 TITLE CRYSTAL STRUCTURE OF MURINE NOROVIRUS P DOMAIN IN COMPLEX WITH TITLE 2 NANOBODY NB-5829 AND GLYCOCHENODEOXYCHOLATE (GCDCA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A, B, E, F; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NANOBODY NB-5829; COMPND 7 CHAIN: C, D, G, H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MURINE NOROVIRUS 1; SOURCE 3 ORGANISM_TAXID: 223997; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PMALC2X; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 9 ORGANISM_TAXID: 30538; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: WK6; SOURCE 13 EXPRESSION_SYSTEM_VECTOR_TYPE: PHEN6C; SOURCE 14 EXPRESSION_SYSTEM_PLASMID: PHEN6C KEYWDS MNV, NEUTRALIZING NANOBODY, VHH, NOROVIRUS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.KILIC,C.SABIN,G.HANSMAN REVDAT 4 24-JAN-24 6XW7 1 LINK REVDAT 3 01-JUL-20 6XW7 1 JRNL REVDAT 2 06-MAY-20 6XW7 1 JRNL REVDAT 1 22-APR-20 6XW7 0 JRNL AUTH A.D.KOROMYSLOVA,J.M.DEVANT,T.KILIC,C.D.SABIN,V.MALAK, JRNL AUTH 2 G.S.HANSMAN JRNL TITL NANOBODY-MEDIATED NEUTRALIZATION REVEALS AN ACHILLES HEEL JRNL TITL 2 FOR NOROVIRUS. JRNL REF J.VIROL. V. 94 2020 JRNL REFN ESSN 1098-5514 JRNL PMID 32321816 JRNL DOI 10.1128/JVI.00660-20 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 108949 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5759 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7451 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 421 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 12858 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 161 REMARK 3 SOLVENT ATOMS : 899 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.88 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : 2.76000 REMARK 3 B33 (A**2) : -0.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.17000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.193 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.169 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.127 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.049 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 13364 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 12165 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 18235 ; 1.596 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 28192 ; 1.272 ; 1.565 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1670 ; 8.154 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 668 ;30.548 ;21.452 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1978 ;13.950 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 92 ;19.340 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1734 ; 0.065 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 15056 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2924 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6XW7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106405. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978560 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 114707 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 49.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 6.886 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.54 REMARK 200 R MERGE FOR SHELL (I) : 0.73200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3LQ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1M PHOSPHATE REMARK 280 -CITRATE PH 4.2, 20% PEG8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 95.36500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.46500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 95.36500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 62.46500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 836 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 363 REMARK 465 ASN A 364 REMARK 465 ALA A 365 REMARK 465 GLY A 531 REMARK 465 SER A 532 REMARK 465 LEU A 533 REMARK 465 SER B 225 REMARK 465 ILE B 226 REMARK 465 TYR B 227 REMARK 465 LEU B 533 REMARK 465 SER E 225 REMARK 465 ILE E 226 REMARK 465 TYR E 227 REMARK 465 GLY E 531 REMARK 465 SER E 532 REMARK 465 LEU E 533 REMARK 465 SER F 225 REMARK 465 ILE F 226 REMARK 465 TYR F 227 REMARK 465 THR F 362 REMARK 465 THR F 363 REMARK 465 ASN F 364 REMARK 465 ALA F 365 REMARK 465 LEU F 533 REMARK 465 HIS C 118 REMARK 465 HIS C 119 REMARK 465 HIS C 120 REMARK 465 HIS C 121 REMARK 465 HIS C 122 REMARK 465 HIS C 123 REMARK 465 HIS D 118 REMARK 465 HIS D 119 REMARK 465 HIS D 120 REMARK 465 HIS D 121 REMARK 465 HIS D 122 REMARK 465 HIS D 123 REMARK 465 HIS G 118 REMARK 465 HIS G 119 REMARK 465 HIS G 120 REMARK 465 HIS G 121 REMARK 465 HIS G 122 REMARK 465 HIS G 123 REMARK 465 GLN H 1 REMARK 465 SER H 116 REMARK 465 SER H 117 REMARK 465 HIS H 118 REMARK 465 HIS H 119 REMARK 465 HIS H 120 REMARK 465 HIS H 121 REMARK 465 HIS H 122 REMARK 465 HIS H 123 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 338 OE2 GLU B 338 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 336 CD GLU B 336 OE1 0.073 REMARK 500 GLU E 336 CD GLU E 336 OE1 0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 244 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 244 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 263 36.94 -98.35 REMARK 500 THR A 301 -58.32 -132.23 REMARK 500 ASP A 348 54.36 -140.35 REMARK 500 GLU A 407 99.33 -63.25 REMARK 500 ASP A 443 -99.53 68.67 REMARK 500 ALA A 444 172.18 64.46 REMARK 500 SER A 470 -164.93 -164.25 REMARK 500 GLN B 263 37.10 -97.40 REMARK 500 THR B 301 -61.51 -123.35 REMARK 500 ASN B 409 55.16 -145.70 REMARK 500 ALA B 442 -34.39 -132.83 REMARK 500 SER B 470 -157.80 -159.19 REMARK 500 GLN E 263 36.62 -95.19 REMARK 500 THR E 301 -51.99 -133.39 REMARK 500 THR E 362 73.67 -19.58 REMARK 500 THR E 363 -82.45 -39.58 REMARK 500 ASN E 364 -102.87 46.06 REMARK 500 ALA E 365 -79.67 -3.10 REMARK 500 ASP E 366 50.52 129.99 REMARK 500 SER E 383 139.53 -36.74 REMARK 500 ASP E 388 152.31 -47.88 REMARK 500 ASN E 409 60.36 -150.48 REMARK 500 VAL E 518 -62.54 -94.22 REMARK 500 ASN F 409 38.06 -143.14 REMARK 500 GLN F 469 -81.26 -108.04 REMARK 500 SER F 470 -152.86 -90.88 REMARK 500 SER C 101 -100.18 -138.64 REMARK 500 TYR C 104 96.67 -68.20 REMARK 500 SER D 57 68.10 24.51 REMARK 500 SER D 101 -110.27 -135.30 REMARK 500 GLU G 89 0.37 -68.18 REMARK 500 SER G 101 -100.74 -146.82 REMARK 500 TYR G 104 96.46 -67.25 REMARK 500 SER H 7 168.57 177.85 REMARK 500 ARG H 45 88.86 -61.02 REMARK 500 SER H 57 61.09 28.12 REMARK 500 SER H 63 31.28 -76.75 REMARK 500 VAL H 64 -8.09 -167.19 REMARK 500 LEU H 86 100.83 -55.15 REMARK 500 ASP H 90 16.80 -63.20 REMARK 500 SER H 101 -124.17 -91.19 REMARK 500 TYR H 104 98.46 -66.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 438 OE1 REMARK 620 2 ASP B 440 OD2 104.9 REMARK 620 3 GLU B 447 OE2 81.8 167.8 REMARK 620 4 HOH B 710 O 84.7 81.8 109.3 REMARK 620 5 HOH B 854 O 174.0 69.1 104.2 93.8 REMARK 620 6 HOH B 863 O 88.2 95.2 74.6 171.2 92.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHO A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHO B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO E 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO E 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHO E 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CHO F 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO G 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 700 DBREF 6XW7 A 226 533 UNP Q80J94 Q80J94_9CALI 226 533 DBREF 6XW7 B 226 533 UNP Q80J94 Q80J94_9CALI 226 533 DBREF 6XW7 E 226 533 UNP Q80J94 Q80J94_9CALI 226 533 DBREF 6XW7 F 226 533 UNP Q80J94 Q80J94_9CALI 226 533 DBREF 6XW7 C 1 123 PDB 6XW7 6XW7 1 123 DBREF 6XW7 D 1 123 PDB 6XW7 6XW7 1 123 DBREF 6XW7 G 1 123 PDB 6XW7 6XW7 1 123 DBREF 6XW7 H 1 123 PDB 6XW7 6XW7 1 123 SEQADV 6XW7 SER A 225 UNP Q80J94 EXPRESSION TAG SEQADV 6XW7 SER B 225 UNP Q80J94 EXPRESSION TAG SEQADV 6XW7 SER E 225 UNP Q80J94 EXPRESSION TAG SEQADV 6XW7 SER F 225 UNP Q80J94 EXPRESSION TAG SEQRES 1 A 309 SER ILE TYR ARG MET VAL ASP LEU PRO VAL ILE GLN PRO SEQRES 2 A 309 ARG LEU CYS THR HIS ALA ARG TRP PRO ALA PRO VAL TYR SEQRES 3 A 309 GLY LEU LEU VAL ASP PRO SER LEU PRO SER ASN PRO GLN SEQRES 4 A 309 TRP GLN ASN GLY ARG VAL HIS VAL ASP GLY THR LEU LEU SEQRES 5 A 309 GLY THR THR PRO ILE SER GLY SER TRP VAL SER CYS PHE SEQRES 6 A 309 ALA ALA GLU ALA ALA TYR LYS PHE GLN SER GLY THR GLY SEQRES 7 A 309 GLU VAL ALA THR PHE THR LEU ILE GLU GLN ASP GLY SER SEQRES 8 A 309 ALA TYR VAL PRO GLY ASP ARG ALA ALA PRO LEU GLY TYR SEQRES 9 A 309 PRO ASP PHE SER GLY GLN LEU GLU ILE GLU VAL GLN THR SEQRES 10 A 309 GLU THR THR LYS THR GLY ASP LYS LEU LYS VAL THR THR SEQRES 11 A 309 PHE GLU MET ILE LEU GLY PRO THR THR ASN ALA ASP GLN SEQRES 12 A 309 ALA PRO TYR GLN GLY ARG VAL PHE ALA SER VAL THR ALA SEQRES 13 A 309 ALA ALA SER LEU ASP LEU VAL ASP GLY ARG VAL ARG ALA SEQRES 14 A 309 VAL PRO ARG SER ILE TYR GLY PHE GLN ASP THR ILE PRO SEQRES 15 A 309 GLU TYR ASN ASP GLY LEU LEU VAL PRO LEU ALA PRO PRO SEQRES 16 A 309 ILE GLY PRO PHE LEU PRO GLY GLU VAL LEU LEU ARG PHE SEQRES 17 A 309 ARG THR TYR MET ARG GLN ILE ASP THR ALA ASP ALA ALA SEQRES 18 A 309 ALA GLU ALA ILE ASP CYS ALA LEU PRO GLN GLU PHE VAL SEQRES 19 A 309 SER TRP PHE ALA SER ASN ALA PHE THR VAL GLN SER GLU SEQRES 20 A 309 ALA LEU LEU LEU ARG TYR ARG ASN THR LEU THR GLY GLN SEQRES 21 A 309 LEU LEU PHE GLU CYS LYS LEU TYR ASN GLU GLY TYR ILE SEQRES 22 A 309 ALA LEU SER TYR SER GLY SER GLY PRO LEU THR PHE PRO SEQRES 23 A 309 THR ASP GLY ILE PHE GLU VAL VAL SER TRP VAL PRO ARG SEQRES 24 A 309 LEU TYR GLN LEU ALA SER VAL GLY SER LEU SEQRES 1 B 309 SER ILE TYR ARG MET VAL ASP LEU PRO VAL ILE GLN PRO SEQRES 2 B 309 ARG LEU CYS THR HIS ALA ARG TRP PRO ALA PRO VAL TYR SEQRES 3 B 309 GLY LEU LEU VAL ASP PRO SER LEU PRO SER ASN PRO GLN SEQRES 4 B 309 TRP GLN ASN GLY ARG VAL HIS VAL ASP GLY THR LEU LEU SEQRES 5 B 309 GLY THR THR PRO ILE SER GLY SER TRP VAL SER CYS PHE SEQRES 6 B 309 ALA ALA GLU ALA ALA TYR LYS PHE GLN SER GLY THR GLY SEQRES 7 B 309 GLU VAL ALA THR PHE THR LEU ILE GLU GLN ASP GLY SER SEQRES 8 B 309 ALA TYR VAL PRO GLY ASP ARG ALA ALA PRO LEU GLY TYR SEQRES 9 B 309 PRO ASP PHE SER GLY GLN LEU GLU ILE GLU VAL GLN THR SEQRES 10 B 309 GLU THR THR LYS THR GLY ASP LYS LEU LYS VAL THR THR SEQRES 11 B 309 PHE GLU MET ILE LEU GLY PRO THR THR ASN ALA ASP GLN SEQRES 12 B 309 ALA PRO TYR GLN GLY ARG VAL PHE ALA SER VAL THR ALA SEQRES 13 B 309 ALA ALA SER LEU ASP LEU VAL ASP GLY ARG VAL ARG ALA SEQRES 14 B 309 VAL PRO ARG SER ILE TYR GLY PHE GLN ASP THR ILE PRO SEQRES 15 B 309 GLU TYR ASN ASP GLY LEU LEU VAL PRO LEU ALA PRO PRO SEQRES 16 B 309 ILE GLY PRO PHE LEU PRO GLY GLU VAL LEU LEU ARG PHE SEQRES 17 B 309 ARG THR TYR MET ARG GLN ILE ASP THR ALA ASP ALA ALA SEQRES 18 B 309 ALA GLU ALA ILE ASP CYS ALA LEU PRO GLN GLU PHE VAL SEQRES 19 B 309 SER TRP PHE ALA SER ASN ALA PHE THR VAL GLN SER GLU SEQRES 20 B 309 ALA LEU LEU LEU ARG TYR ARG ASN THR LEU THR GLY GLN SEQRES 21 B 309 LEU LEU PHE GLU CYS LYS LEU TYR ASN GLU GLY TYR ILE SEQRES 22 B 309 ALA LEU SER TYR SER GLY SER GLY PRO LEU THR PHE PRO SEQRES 23 B 309 THR ASP GLY ILE PHE GLU VAL VAL SER TRP VAL PRO ARG SEQRES 24 B 309 LEU TYR GLN LEU ALA SER VAL GLY SER LEU SEQRES 1 E 309 SER ILE TYR ARG MET VAL ASP LEU PRO VAL ILE GLN PRO SEQRES 2 E 309 ARG LEU CYS THR HIS ALA ARG TRP PRO ALA PRO VAL TYR SEQRES 3 E 309 GLY LEU LEU VAL ASP PRO SER LEU PRO SER ASN PRO GLN SEQRES 4 E 309 TRP GLN ASN GLY ARG VAL HIS VAL ASP GLY THR LEU LEU SEQRES 5 E 309 GLY THR THR PRO ILE SER GLY SER TRP VAL SER CYS PHE SEQRES 6 E 309 ALA ALA GLU ALA ALA TYR LYS PHE GLN SER GLY THR GLY SEQRES 7 E 309 GLU VAL ALA THR PHE THR LEU ILE GLU GLN ASP GLY SER SEQRES 8 E 309 ALA TYR VAL PRO GLY ASP ARG ALA ALA PRO LEU GLY TYR SEQRES 9 E 309 PRO ASP PHE SER GLY GLN LEU GLU ILE GLU VAL GLN THR SEQRES 10 E 309 GLU THR THR LYS THR GLY ASP LYS LEU LYS VAL THR THR SEQRES 11 E 309 PHE GLU MET ILE LEU GLY PRO THR THR ASN ALA ASP GLN SEQRES 12 E 309 ALA PRO TYR GLN GLY ARG VAL PHE ALA SER VAL THR ALA SEQRES 13 E 309 ALA ALA SER LEU ASP LEU VAL ASP GLY ARG VAL ARG ALA SEQRES 14 E 309 VAL PRO ARG SER ILE TYR GLY PHE GLN ASP THR ILE PRO SEQRES 15 E 309 GLU TYR ASN ASP GLY LEU LEU VAL PRO LEU ALA PRO PRO SEQRES 16 E 309 ILE GLY PRO PHE LEU PRO GLY GLU VAL LEU LEU ARG PHE SEQRES 17 E 309 ARG THR TYR MET ARG GLN ILE ASP THR ALA ASP ALA ALA SEQRES 18 E 309 ALA GLU ALA ILE ASP CYS ALA LEU PRO GLN GLU PHE VAL SEQRES 19 E 309 SER TRP PHE ALA SER ASN ALA PHE THR VAL GLN SER GLU SEQRES 20 E 309 ALA LEU LEU LEU ARG TYR ARG ASN THR LEU THR GLY GLN SEQRES 21 E 309 LEU LEU PHE GLU CYS LYS LEU TYR ASN GLU GLY TYR ILE SEQRES 22 E 309 ALA LEU SER TYR SER GLY SER GLY PRO LEU THR PHE PRO SEQRES 23 E 309 THR ASP GLY ILE PHE GLU VAL VAL SER TRP VAL PRO ARG SEQRES 24 E 309 LEU TYR GLN LEU ALA SER VAL GLY SER LEU SEQRES 1 F 309 SER ILE TYR ARG MET VAL ASP LEU PRO VAL ILE GLN PRO SEQRES 2 F 309 ARG LEU CYS THR HIS ALA ARG TRP PRO ALA PRO VAL TYR SEQRES 3 F 309 GLY LEU LEU VAL ASP PRO SER LEU PRO SER ASN PRO GLN SEQRES 4 F 309 TRP GLN ASN GLY ARG VAL HIS VAL ASP GLY THR LEU LEU SEQRES 5 F 309 GLY THR THR PRO ILE SER GLY SER TRP VAL SER CYS PHE SEQRES 6 F 309 ALA ALA GLU ALA ALA TYR LYS PHE GLN SER GLY THR GLY SEQRES 7 F 309 GLU VAL ALA THR PHE THR LEU ILE GLU GLN ASP GLY SER SEQRES 8 F 309 ALA TYR VAL PRO GLY ASP ARG ALA ALA PRO LEU GLY TYR SEQRES 9 F 309 PRO ASP PHE SER GLY GLN LEU GLU ILE GLU VAL GLN THR SEQRES 10 F 309 GLU THR THR LYS THR GLY ASP LYS LEU LYS VAL THR THR SEQRES 11 F 309 PHE GLU MET ILE LEU GLY PRO THR THR ASN ALA ASP GLN SEQRES 12 F 309 ALA PRO TYR GLN GLY ARG VAL PHE ALA SER VAL THR ALA SEQRES 13 F 309 ALA ALA SER LEU ASP LEU VAL ASP GLY ARG VAL ARG ALA SEQRES 14 F 309 VAL PRO ARG SER ILE TYR GLY PHE GLN ASP THR ILE PRO SEQRES 15 F 309 GLU TYR ASN ASP GLY LEU LEU VAL PRO LEU ALA PRO PRO SEQRES 16 F 309 ILE GLY PRO PHE LEU PRO GLY GLU VAL LEU LEU ARG PHE SEQRES 17 F 309 ARG THR TYR MET ARG GLN ILE ASP THR ALA ASP ALA ALA SEQRES 18 F 309 ALA GLU ALA ILE ASP CYS ALA LEU PRO GLN GLU PHE VAL SEQRES 19 F 309 SER TRP PHE ALA SER ASN ALA PHE THR VAL GLN SER GLU SEQRES 20 F 309 ALA LEU LEU LEU ARG TYR ARG ASN THR LEU THR GLY GLN SEQRES 21 F 309 LEU LEU PHE GLU CYS LYS LEU TYR ASN GLU GLY TYR ILE SEQRES 22 F 309 ALA LEU SER TYR SER GLY SER GLY PRO LEU THR PHE PRO SEQRES 23 F 309 THR ASP GLY ILE PHE GLU VAL VAL SER TRP VAL PRO ARG SEQRES 24 F 309 LEU TYR GLN LEU ALA SER VAL GLY SER LEU SEQRES 1 C 123 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLU SEQRES 2 C 123 ALA GLY GLY SER LEU ARG LEU SER CYS LEU GLY SER GLY SEQRES 3 C 123 LEU THR PHE SER ARG TYR ALA MET GLY TRP PHE ARG GLN SEQRES 4 C 123 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE THR SEQRES 5 C 123 ARG SER GLY GLY SER PRO ASN TYR ALA ASP SER VAL LYS SEQRES 6 C 123 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 C 123 VAL TYR LEU GLN MET SER SER LEU LYS PRO GLU ASP THR SEQRES 8 C 123 ALA VAL TYR TYR CYS ALA GLY ARG GLY SER VAL TYR TYR SEQRES 9 C 123 ASP VAL TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 10 C 123 HIS HIS HIS HIS HIS HIS SEQRES 1 D 123 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLU SEQRES 2 D 123 ALA GLY GLY SER LEU ARG LEU SER CYS LEU GLY SER GLY SEQRES 3 D 123 LEU THR PHE SER ARG TYR ALA MET GLY TRP PHE ARG GLN SEQRES 4 D 123 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE THR SEQRES 5 D 123 ARG SER GLY GLY SER PRO ASN TYR ALA ASP SER VAL LYS SEQRES 6 D 123 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 D 123 VAL TYR LEU GLN MET SER SER LEU LYS PRO GLU ASP THR SEQRES 8 D 123 ALA VAL TYR TYR CYS ALA GLY ARG GLY SER VAL TYR TYR SEQRES 9 D 123 ASP VAL TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 10 D 123 HIS HIS HIS HIS HIS HIS SEQRES 1 G 123 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLU SEQRES 2 G 123 ALA GLY GLY SER LEU ARG LEU SER CYS LEU GLY SER GLY SEQRES 3 G 123 LEU THR PHE SER ARG TYR ALA MET GLY TRP PHE ARG GLN SEQRES 4 G 123 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE THR SEQRES 5 G 123 ARG SER GLY GLY SER PRO ASN TYR ALA ASP SER VAL LYS SEQRES 6 G 123 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 G 123 VAL TYR LEU GLN MET SER SER LEU LYS PRO GLU ASP THR SEQRES 8 G 123 ALA VAL TYR TYR CYS ALA GLY ARG GLY SER VAL TYR TYR SEQRES 9 G 123 ASP VAL TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 10 G 123 HIS HIS HIS HIS HIS HIS SEQRES 1 H 123 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU VAL GLU SEQRES 2 H 123 ALA GLY GLY SER LEU ARG LEU SER CYS LEU GLY SER GLY SEQRES 3 H 123 LEU THR PHE SER ARG TYR ALA MET GLY TRP PHE ARG GLN SEQRES 4 H 123 ALA PRO GLY LYS GLU ARG GLU PHE VAL ALA SER ILE THR SEQRES 5 H 123 ARG SER GLY GLY SER PRO ASN TYR ALA ASP SER VAL LYS SEQRES 6 H 123 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR SEQRES 7 H 123 VAL TYR LEU GLN MET SER SER LEU LYS PRO GLU ASP THR SEQRES 8 H 123 ALA VAL TYR TYR CYS ALA GLY ARG GLY SER VAL TYR TYR SEQRES 9 H 123 ASP VAL TRP GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 10 H 123 HIS HIS HIS HIS HIS HIS HET EDO A 601 4 HET EDO A 602 4 HET CHO A 603 32 HET CHO B 601 32 HET MG B 602 1 HET EDO E 601 4 HET EDO E 602 4 HET CHO E 603 32 HET CHO F 900 32 HET EDO C 700 4 HET EDO D 700 4 HET EDO G 700 4 HET EDO H 700 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM CHO GLYCOCHENODEOXYCHOLIC ACID HETNAM MG MAGNESIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 9 EDO 8(C2 H6 O2) FORMUL 11 CHO 4(C26 H43 N O5) FORMUL 13 MG MG 2+ FORMUL 22 HOH *899(H2 O) HELIX 1 AA1 GLN A 236 CYS A 240 5 5 HELIX 2 AA2 SER A 282 VAL A 286 5 5 HELIX 3 AA3 ALA A 368 GLN A 371 5 4 HELIX 4 AA4 PRO A 454 ALA A 465 1 12 HELIX 5 AA5 GLN B 236 CYS B 240 5 5 HELIX 6 AA6 SER B 282 VAL B 286 5 5 HELIX 7 AA7 PRO B 454 ALA B 465 1 12 HELIX 8 AA8 GLN E 236 CYS E 240 5 5 HELIX 9 AA9 SER E 282 VAL E 286 5 5 HELIX 10 AB1 PRO E 454 ALA E 465 1 12 HELIX 11 AB2 GLN F 236 CYS F 240 5 5 HELIX 12 AB3 SER F 282 VAL F 286 5 5 HELIX 13 AB4 ALA F 368 GLN F 371 5 4 HELIX 14 AB5 PRO F 454 ALA F 465 1 12 HELIX 15 AB6 THR C 28 TYR C 32 5 5 HELIX 16 AB7 ASP C 62 LYS C 65 5 4 HELIX 17 AB8 ASN C 74 LYS C 76 5 3 HELIX 18 AB9 LYS C 87 THR C 91 5 5 HELIX 19 AC1 THR D 28 TYR D 32 5 5 HELIX 20 AC2 ASP D 62 LYS D 65 5 4 HELIX 21 AC3 ASN D 74 LYS D 76 5 3 HELIX 22 AC4 LYS D 87 THR D 91 5 5 HELIX 23 AC5 THR G 28 TYR G 32 5 5 HELIX 24 AC6 ASP G 62 LYS G 65 5 4 HELIX 25 AC7 ASN G 74 LYS G 76 5 3 HELIX 26 AC8 LYS G 87 THR G 91 5 5 HELIX 27 AC9 THR H 28 TYR H 32 5 5 HELIX 28 AD1 ASP H 62 LYS H 65 5 4 SHEET 1 AA1 4 GLU A 447 CYS A 451 0 SHEET 2 AA1 4 ARG A 431 MET A 436 -1 N PHE A 432 O CYS A 451 SHEET 3 AA1 4 GLY A 251 VAL A 254 -1 N LEU A 253 O ARG A 431 SHEET 4 AA1 4 LEU A 507 THR A 508 -1 O LEU A 507 N VAL A 254 SHEET 1 AA2 7 PHE A 289 GLN A 298 0 SHEET 2 AA2 7 GLY A 302 ILE A 310 -1 O GLY A 302 N GLN A 298 SHEET 3 AA2 7 ARG A 373 VAL A 378 -1 O VAL A 374 N PHE A 307 SHEET 4 AA2 7 LEU A 350 GLY A 360 -1 N GLU A 356 O SER A 377 SHEET 5 AA2 7 SER A 332 GLU A 342 -1 N LEU A 335 O MET A 357 SHEET 6 AA2 7 GLY A 389 GLN A 402 -1 O TYR A 399 N GLN A 334 SHEET 7 AA2 7 PHE A 289 GLN A 298 -1 N ALA A 293 O GLY A 389 SHEET 1 AA3 5 GLU A 427 LEU A 429 0 SHEET 2 AA3 5 TYR A 496 SER A 500 -1 O LEU A 499 N VAL A 428 SHEET 3 AA3 5 LEU A 485 TYR A 492 -1 N LYS A 490 O ALA A 498 SHEET 4 AA3 5 ALA A 472 ARG A 478 -1 N LEU A 475 O CYS A 489 SHEET 5 AA3 5 ILE A 514 VAL A 521 -1 O VAL A 521 N ALA A 472 SHEET 1 AA4 4 GLU B 447 CYS B 451 0 SHEET 2 AA4 4 ARG B 431 MET B 436 -1 N PHE B 432 O CYS B 451 SHEET 3 AA4 4 GLY B 251 VAL B 254 -1 N LEU B 253 O ARG B 431 SHEET 4 AA4 4 LEU B 507 THR B 508 -1 O LEU B 507 N VAL B 254 SHEET 1 AA5 8 GLN B 438 ILE B 439 0 SHEET 2 AA5 8 GLY B 389 GLN B 402 1 N ILE B 398 O ILE B 439 SHEET 3 AA5 8 SER B 332 GLU B 342 -1 N GLN B 334 O TYR B 399 SHEET 4 AA5 8 LEU B 350 ILE B 358 -1 O MET B 357 N LEU B 335 SHEET 5 AA5 8 ARG B 373 VAL B 378 -1 O SER B 377 N GLU B 356 SHEET 6 AA5 8 GLY B 302 ILE B 310 -1 N PHE B 307 O VAL B 374 SHEET 7 AA5 8 PHE B 289 GLN B 298 -1 N LYS B 296 O VAL B 304 SHEET 8 AA5 8 GLY B 389 GLN B 402 -1 O GLY B 389 N ALA B 293 SHEET 1 AA6 5 GLU B 427 LEU B 429 0 SHEET 2 AA6 5 TYR B 496 SER B 500 -1 O LEU B 499 N VAL B 428 SHEET 3 AA6 5 LEU B 485 TYR B 492 -1 N LYS B 490 O ALA B 498 SHEET 4 AA6 5 ALA B 472 ARG B 478 -1 N LEU B 475 O CYS B 489 SHEET 5 AA6 5 ILE B 514 VAL B 521 -1 O SER B 519 N LEU B 474 SHEET 1 AA7 4 GLU E 447 CYS E 451 0 SHEET 2 AA7 4 ARG E 431 MET E 436 -1 N PHE E 432 O CYS E 451 SHEET 3 AA7 4 GLY E 251 VAL E 254 -1 N LEU E 253 O ARG E 431 SHEET 4 AA7 4 LEU E 507 THR E 508 -1 O LEU E 507 N VAL E 254 SHEET 1 AA8 7 PHE E 289 GLN E 298 0 SHEET 2 AA8 7 GLY E 302 ILE E 310 -1 O VAL E 304 N LYS E 296 SHEET 3 AA8 7 ARG E 373 VAL E 378 -1 O VAL E 374 N PHE E 307 SHEET 4 AA8 7 LEU E 350 GLY E 360 -1 N GLU E 356 O SER E 377 SHEET 5 AA8 7 SER E 332 GLU E 342 -1 N ILE E 337 O PHE E 355 SHEET 6 AA8 7 GLY E 389 GLN E 402 -1 O TYR E 399 N GLN E 334 SHEET 7 AA8 7 PHE E 289 GLN E 298 -1 N ALA E 293 O GLY E 389 SHEET 1 AA9 5 GLU E 427 LEU E 429 0 SHEET 2 AA9 5 TYR E 496 SER E 500 -1 O LEU E 499 N VAL E 428 SHEET 3 AA9 5 LEU E 485 TYR E 492 -1 N TYR E 492 O TYR E 496 SHEET 4 AA9 5 ALA E 472 ARG E 478 -1 N LEU E 475 O CYS E 489 SHEET 5 AA9 5 ILE E 514 VAL E 521 -1 O VAL E 518 N LEU E 474 SHEET 1 AB1 4 ALA F 448 CYS F 451 0 SHEET 2 AB1 4 ARG F 431 TYR F 435 -1 N PHE F 432 O CYS F 451 SHEET 3 AB1 4 GLY F 251 VAL F 254 -1 N LEU F 253 O ARG F 431 SHEET 4 AB1 4 LEU F 507 THR F 508 -1 O LEU F 507 N VAL F 254 SHEET 1 AB2 8 GLN F 438 ILE F 439 0 SHEET 2 AB2 8 GLY F 389 GLN F 402 1 N ILE F 398 O ILE F 439 SHEET 3 AB2 8 SER F 332 GLU F 342 -1 N GLN F 334 O TYR F 399 SHEET 4 AB2 8 LEU F 350 GLY F 360 -1 O LYS F 351 N THR F 341 SHEET 5 AB2 8 ARG F 373 VAL F 378 -1 O SER F 377 N GLU F 356 SHEET 6 AB2 8 GLY F 302 ILE F 310 -1 N PHE F 307 O VAL F 374 SHEET 7 AB2 8 PHE F 289 GLN F 298 -1 N LYS F 296 O VAL F 304 SHEET 8 AB2 8 GLY F 389 GLN F 402 -1 O ALA F 393 N PHE F 289 SHEET 1 AB3 5 GLU F 427 LEU F 429 0 SHEET 2 AB3 5 ILE F 497 SER F 500 -1 O LEU F 499 N VAL F 428 SHEET 3 AB3 5 LEU F 485 TYR F 492 -1 N LYS F 490 O ALA F 498 SHEET 4 AB3 5 ALA F 472 ARG F 478 -1 N LEU F 473 O LEU F 491 SHEET 5 AB3 5 ILE F 514 VAL F 521 -1 O VAL F 518 N LEU F 474 SHEET 1 AB4 4 GLN C 3 SER C 7 0 SHEET 2 AB4 4 LEU C 18 SER C 25 -1 O SER C 21 N SER C 7 SHEET 3 AB4 4 THR C 78 MET C 83 -1 O MET C 83 N LEU C 18 SHEET 4 AB4 4 PHE C 68 ASP C 73 -1 N SER C 71 O TYR C 80 SHEET 1 AB5 6 GLY C 10 GLU C 13 0 SHEET 2 AB5 6 THR C 111 SER C 116 1 O THR C 114 N VAL C 12 SHEET 3 AB5 6 ALA C 92 ARG C 99 -1 N TYR C 94 O THR C 111 SHEET 4 AB5 6 ALA C 33 GLN C 39 -1 N PHE C 37 O TYR C 95 SHEET 5 AB5 6 GLU C 46 ILE C 51 -1 O GLU C 46 N ARG C 38 SHEET 6 AB5 6 ASN C 59 TYR C 60 -1 O ASN C 59 N SER C 50 SHEET 1 AB6 4 GLY C 10 GLU C 13 0 SHEET 2 AB6 4 THR C 111 SER C 116 1 O THR C 114 N VAL C 12 SHEET 3 AB6 4 ALA C 92 ARG C 99 -1 N TYR C 94 O THR C 111 SHEET 4 AB6 4 TYR C 104 TRP C 107 -1 O VAL C 106 N GLY C 98 SHEET 1 AB7 4 GLN D 3 SER D 7 0 SHEET 2 AB7 4 LEU D 18 SER D 25 -1 O SER D 21 N SER D 7 SHEET 3 AB7 4 THR D 78 MET D 83 -1 O MET D 83 N LEU D 18 SHEET 4 AB7 4 PHE D 68 ASP D 73 -1 N THR D 69 O GLN D 82 SHEET 1 AB8 6 GLY D 10 GLU D 13 0 SHEET 2 AB8 6 THR D 111 SER D 116 1 O THR D 114 N GLY D 10 SHEET 3 AB8 6 ALA D 92 ARG D 99 -1 N TYR D 94 O THR D 111 SHEET 4 AB8 6 ALA D 33 GLN D 39 -1 N PHE D 37 O TYR D 95 SHEET 5 AB8 6 GLU D 46 ILE D 51 -1 O GLU D 46 N ARG D 38 SHEET 6 AB8 6 ASN D 59 TYR D 60 -1 O ASN D 59 N SER D 50 SHEET 1 AB9 4 GLY D 10 GLU D 13 0 SHEET 2 AB9 4 THR D 111 SER D 116 1 O THR D 114 N GLY D 10 SHEET 3 AB9 4 ALA D 92 ARG D 99 -1 N TYR D 94 O THR D 111 SHEET 4 AB9 4 VAL D 106 TRP D 107 -1 O VAL D 106 N GLY D 98 SHEET 1 AC1 4 GLN G 3 SER G 7 0 SHEET 2 AC1 4 LEU G 18 SER G 25 -1 O LEU G 23 N GLN G 5 SHEET 3 AC1 4 THR G 78 MET G 83 -1 O MET G 83 N LEU G 18 SHEET 4 AC1 4 PHE G 68 ASP G 73 -1 N SER G 71 O TYR G 80 SHEET 1 AC2 6 GLY G 10 VAL G 12 0 SHEET 2 AC2 6 THR G 111 VAL G 115 1 O GLN G 112 N GLY G 10 SHEET 3 AC2 6 ALA G 92 ARG G 99 -1 N TYR G 94 O THR G 111 SHEET 4 AC2 6 ALA G 33 GLN G 39 -1 N PHE G 37 O TYR G 95 SHEET 5 AC2 6 GLU G 46 ILE G 51 -1 O GLU G 46 N ARG G 38 SHEET 6 AC2 6 ASN G 59 TYR G 60 -1 O ASN G 59 N SER G 50 SHEET 1 AC3 4 GLY G 10 VAL G 12 0 SHEET 2 AC3 4 THR G 111 VAL G 115 1 O GLN G 112 N GLY G 10 SHEET 3 AC3 4 ALA G 92 ARG G 99 -1 N TYR G 94 O THR G 111 SHEET 4 AC3 4 VAL G 106 TRP G 107 -1 O VAL G 106 N GLY G 98 SHEET 1 AC4 4 GLN H 3 SER H 7 0 SHEET 2 AC4 4 ARG H 19 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AC4 4 THR H 78 GLN H 82 -1 O LEU H 81 N LEU H 20 SHEET 4 AC4 4 THR H 69 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 AC5 5 ASN H 59 TYR H 60 0 SHEET 2 AC5 5 ARG H 45 ILE H 51 -1 N SER H 50 O ASN H 59 SHEET 3 AC5 5 ALA H 33 GLN H 39 -1 N TRP H 36 O ALA H 49 SHEET 4 AC5 5 ALA H 92 ARG H 99 -1 O TYR H 95 N PHE H 37 SHEET 5 AC5 5 VAL H 106 TRP H 107 -1 O VAL H 106 N GLY H 98 SHEET 1 AC6 5 ASN H 59 TYR H 60 0 SHEET 2 AC6 5 ARG H 45 ILE H 51 -1 N SER H 50 O ASN H 59 SHEET 3 AC6 5 ALA H 33 GLN H 39 -1 N TRP H 36 O ALA H 49 SHEET 4 AC6 5 ALA H 92 ARG H 99 -1 O TYR H 95 N PHE H 37 SHEET 5 AC6 5 THR H 111 VAL H 113 -1 O THR H 111 N TYR H 94 SSBOND 1 CYS C 22 CYS C 96 1555 1555 2.04 SSBOND 2 CYS D 22 CYS D 96 1555 1555 2.07 SSBOND 3 CYS G 22 CYS G 96 1555 1555 2.04 LINK OE1 GLN B 438 MG MG B 602 1555 1555 2.35 LINK OD2 ASP B 440 MG MG B 602 1555 1555 2.44 LINK OE2 GLU B 447 MG MG B 602 1555 1555 2.62 LINK MG MG B 602 O HOH B 710 1555 1555 2.73 LINK MG MG B 602 O HOH B 854 1555 1555 2.77 LINK MG MG B 602 O HOH B 863 1555 1555 2.36 CISPEP 1 GLY A 360 PRO A 361 0 11.21 CISPEP 2 GLY A 421 PRO A 422 0 0.01 CISPEP 3 GLY B 360 PRO B 361 0 7.03 CISPEP 4 GLY B 421 PRO B 422 0 2.10 CISPEP 5 GLY E 360 PRO E 361 0 -6.41 CISPEP 6 GLY E 421 PRO E 422 0 7.27 CISPEP 7 GLY F 360 PRO F 361 0 -28.77 CISPEP 8 GLY F 421 PRO F 422 0 4.23 SITE 1 AC1 6 TYR A 295 GLN A 340 THR A 341 GLU A 342 SITE 2 AC1 6 VAL A 387 VAL A 391 SITE 1 AC2 6 ASN A 261 PRO A 419 GLY A 421 PRO A 422 SITE 2 AC2 6 HOH A 718 THR C 69 SITE 1 AC3 17 TRP A 245 ALA A 247 TYR A 435 MET A 436 SITE 2 AC3 17 ARG A 437 HOH A 715 HOH A 750 HOH A 824 SITE 3 AC3 17 HOH A 856 ALA B 290 ILE B 310 GLN B 312 SITE 4 AC3 17 GLY B 314 ARG B 390 VAL B 391 ARG B 392 SITE 5 AC3 17 HOH B 777 SITE 1 AC4 16 ILE A 310 GLN A 312 GLY A 314 ARG A 390 SITE 2 AC4 16 VAL A 391 ARG A 392 HOH A 777 TRP B 245 SITE 3 AC4 16 ALA B 247 TYR B 250 TYR B 435 ARG B 437 SITE 4 AC4 16 HOH B 721 HOH B 751 HOH B 755 HOH B 787 SITE 1 AC5 6 GLN B 438 ASP B 440 GLU B 447 HOH B 710 SITE 2 AC5 6 HOH B 854 HOH B 863 SITE 1 AC6 7 TYR E 295 GLN E 340 THR E 341 GLU E 342 SITE 2 AC6 7 VAL E 387 ARG E 390 VAL E 391 SITE 1 AC7 4 ASN E 261 PRO E 419 GLY E 421 PRO E 422 SITE 1 AC8 14 TRP E 245 ALA E 247 TYR E 250 TYR E 435 SITE 2 AC8 14 ARG E 437 HOH E 738 HOH E 772 HOH E 784 SITE 3 AC8 14 ALA F 290 GLN F 312 GLY F 314 ARG F 390 SITE 4 AC8 14 VAL F 391 ARG F 392 SITE 1 AC9 10 GLN E 312 ARG E 390 VAL E 391 ARG E 392 SITE 2 AC9 10 HOH E 730 TRP F 245 ALA F 247 TYR F 435 SITE 3 AC9 10 ARG F 437 HOH F1049 SITE 1 AD1 7 LEU A 275 LEU A 276 SER C 50 ILE C 51 SITE 2 AD1 7 SER C 57 ASN C 59 ARG C 99 SITE 1 AD2 9 THR B 274 LEU B 275 LEU B 276 SER D 50 SITE 2 AD2 9 ILE D 51 SER D 57 ASN D 59 ARG D 99 SITE 3 AD2 9 HOH D 806 SITE 1 AD3 9 THR E 274 LEU E 275 LEU E 276 SER G 50 SITE 2 AD3 9 ILE G 51 SER G 57 ASN G 59 ARG G 99 SITE 3 AD3 9 HOH G 803 SITE 1 AD4 7 THR F 274 LEU F 275 LEU F 276 SER H 50 SITE 2 AD4 7 SER H 57 ASN H 59 ARG H 99 CRYST1 190.730 124.930 113.130 90.00 125.30 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005243 0.000000 0.003713 0.00000 SCALE2 0.000000 0.008004 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010831 0.00000