HEADER TRANSCRIPTION 28-JAN-20 6XXS TITLE CRYSTAL STRUCTURE OF AN NCOR1BBD2-BCL6BTB CHIMERA IN COMPLEX WITH THE TITLE 2 NCOR1 BBD1 COREPRESSOR PEPTIDE. COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CELL LYMPHOMA 6 PROTEIN; COMPND 3 CHAIN: A, B, F; COMPND 4 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 5 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NUCLEAR RECEPTOR COREPRESSOR 1; COMPND 9 CHAIN: C, D, G, H; COMPND 10 SYNONYM: N-COR1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: B-CELL LYMPHOMA 6 PROTEIN; COMPND 14 CHAIN: E; COMPND 15 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 16 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_COMMON: HUMAN; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BCL6, NCOR1., TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR T.ZACHARCHENKO,S.C.WRIGHT REVDAT 4 24-JAN-24 6XXS 1 REMARK REVDAT 3 24-MAR-21 6XXS 1 JRNL REVDAT 2 03-FEB-21 6XXS 1 JRNL REVDAT 1 02-DEC-20 6XXS 0 JRNL AUTH T.ZACHARCHENKO,S.WRIGHT JRNL TITL FUNCTIONALIZATION OF THE BCL6 BTB DOMAIN INTO A NONCOVALENT JRNL TITL 2 CRYSTALLIZATION CHAPERONE. JRNL REF IUCRJ V. 8 154 2021 JRNL REFN ESSN 2052-2525 JRNL PMID 33708392 JRNL DOI 10.1107/S2052252520015754 REMARK 2 REMARK 2 RESOLUTION. 3.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 31776 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1610 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 82.6900 - 7.4400 0.99 2719 164 0.1686 0.2088 REMARK 3 2 7.4400 - 5.9100 1.00 2594 112 0.1959 0.1974 REMARK 3 3 5.9000 - 5.1600 1.00 2548 131 0.1606 0.2359 REMARK 3 4 5.1600 - 4.6900 1.00 2511 139 0.1315 0.1513 REMARK 3 5 4.6900 - 4.3500 1.00 2492 138 0.1347 0.1477 REMARK 3 6 4.3500 - 4.0900 1.00 2493 144 0.1641 0.1912 REMARK 3 7 4.0900 - 3.8900 1.00 2468 145 0.2055 0.2610 REMARK 3 8 3.8900 - 3.7200 1.00 2495 126 0.2239 0.2670 REMARK 3 9 3.7200 - 3.5800 1.00 2470 133 0.2620 0.2817 REMARK 3 10 3.5800 - 3.4500 1.00 2459 126 0.3042 0.3167 REMARK 3 11 3.4500 - 3.3500 1.00 2470 134 0.3244 0.3344 REMARK 3 12 3.3500 - 3.2500 1.00 2447 118 0.3404 0.3574 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.433 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.912 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 72.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4764 REMARK 3 ANGLE : 0.575 6425 REMARK 3 CHIRALITY : 0.046 756 REMARK 3 PLANARITY : 0.004 819 REMARK 3 DIHEDRAL : 16.961 1827 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID -2 THROUGH 127) REMARK 3 ORIGIN FOR THE GROUP (A): -71.5485 36.3347 -46.6411 REMARK 3 T TENSOR REMARK 3 T11: 0.3754 T22: 0.4861 REMARK 3 T33: 0.3402 T12: 0.0204 REMARK 3 T13: -0.0006 T23: -0.0524 REMARK 3 L TENSOR REMARK 3 L11: 2.9629 L22: 2.5244 REMARK 3 L33: 2.6283 L12: 1.2189 REMARK 3 L13: 1.6323 L23: 0.5455 REMARK 3 S TENSOR REMARK 3 S11: 0.0761 S12: 0.2129 S13: -0.1302 REMARK 3 S21: -0.0257 S22: 0.1669 S23: 0.0117 REMARK 3 S31: 0.2944 S32: -0.1094 S33: -0.2497 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID -4 THROUGH 126) REMARK 3 ORIGIN FOR THE GROUP (A): -62.2856 44.4822 -34.8781 REMARK 3 T TENSOR REMARK 3 T11: 0.4183 T22: 0.4199 REMARK 3 T33: 0.4017 T12: -0.0474 REMARK 3 T13: -0.0214 T23: -0.0413 REMARK 3 L TENSOR REMARK 3 L11: 1.8712 L22: 1.5755 REMARK 3 L33: 5.5498 L12: 0.0847 REMARK 3 L13: 0.7578 L23: 1.1335 REMARK 3 S TENSOR REMARK 3 S11: 0.0831 S12: -0.2381 S13: 0.2079 REMARK 3 S21: 0.2569 S22: -0.0372 S23: -0.1604 REMARK 3 S31: 0.1478 S32: -0.1219 S33: -0.0452 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 1340 THROUGH 1356) REMARK 3 ORIGIN FOR THE GROUP (A): -68.8353 43.8845 -54.1518 REMARK 3 T TENSOR REMARK 3 T11: 0.6435 T22: 0.4255 REMARK 3 T33: 0.2917 T12: 0.0070 REMARK 3 T13: -0.0266 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 7.6728 L22: 5.7733 REMARK 3 L33: 5.9308 L12: -0.2177 REMARK 3 L13: -1.4523 L23: 1.8974 REMARK 3 S TENSOR REMARK 3 S11: -0.2139 S12: 0.2217 S13: 1.1267 REMARK 3 S21: -0.1773 S22: 0.7392 S23: -0.2727 REMARK 3 S31: -0.2738 S32: -0.2683 S33: -0.6022 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 1341 THROUGH 1356) REMARK 3 ORIGIN FOR THE GROUP (A): -53.4378 44.1676 -40.9788 REMARK 3 T TENSOR REMARK 3 T11: 0.4208 T22: 0.4861 REMARK 3 T33: 0.5342 T12: -0.1109 REMARK 3 T13: 0.0138 T23: -0.1906 REMARK 3 L TENSOR REMARK 3 L11: 4.9065 L22: 5.1600 REMARK 3 L33: 4.3191 L12: -0.0628 REMARK 3 L13: 0.9926 L23: 0.9130 REMARK 3 S TENSOR REMARK 3 S11: 0.0306 S12: 0.3157 S13: 0.1253 REMARK 3 S21: -0.7813 S22: 0.2040 S23: -0.7216 REMARK 3 S31: -0.0251 S32: 1.1989 S33: -0.4168 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN 'E' AND RESID 6 THROUGH 127) REMARK 3 ORIGIN FOR THE GROUP (A): -63.4961 -1.9567 -57.5349 REMARK 3 T TENSOR REMARK 3 T11: 0.5490 T22: 0.3930 REMARK 3 T33: 0.4202 T12: 0.0497 REMARK 3 T13: -0.1051 T23: -0.0902 REMARK 3 L TENSOR REMARK 3 L11: 6.3140 L22: 3.5802 REMARK 3 L33: 1.9319 L12: 0.7153 REMARK 3 L13: 0.5398 L23: 0.6623 REMARK 3 S TENSOR REMARK 3 S11: 0.0297 S12: 0.0413 S13: -0.0830 REMARK 3 S21: 0.2759 S22: 0.1024 S23: -0.2028 REMARK 3 S31: 0.1285 S32: 0.2904 S33: -0.1010 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN 'G' AND RESID 1340 THROUGH 1356) REMARK 3 ORIGIN FOR THE GROUP (A): -52.2330 -6.6401 -59.6485 REMARK 3 T TENSOR REMARK 3 T11: 0.8162 T22: 0.5944 REMARK 3 T33: 0.9817 T12: 0.0325 REMARK 3 T13: 0.0193 T23: -0.3689 REMARK 3 L TENSOR REMARK 3 L11: 3.8364 L22: 4.1865 REMARK 3 L33: 8.7943 L12: -3.0445 REMARK 3 L13: 4.0079 L23: -6.0439 REMARK 3 S TENSOR REMARK 3 S11: 0.4434 S12: 0.4956 S13: -0.7175 REMARK 3 S21: 1.0225 S22: 0.3058 S23: -0.3288 REMARK 3 S31: -0.7605 S32: 1.2799 S33: -0.7993 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN 'F' AND RESID -2 THROUGH 126) REMARK 3 ORIGIN FOR THE GROUP (A): -51.2291 13.7270 -53.8392 REMARK 3 T TENSOR REMARK 3 T11: 0.4764 T22: 0.6929 REMARK 3 T33: 0.7512 T12: -0.0187 REMARK 3 T13: -0.0569 T23: -0.2419 REMARK 3 L TENSOR REMARK 3 L11: 1.4341 L22: 2.6972 REMARK 3 L33: 1.4028 L12: 1.1856 REMARK 3 L13: 0.1634 L23: -0.0383 REMARK 3 S TENSOR REMARK 3 S11: -0.2249 S12: 0.1244 S13: 0.1120 REMARK 3 S21: 0.0139 S22: 0.4266 S23: -0.9825 REMARK 3 S31: -0.0994 S32: 0.5200 S33: -0.1654 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN 'H' AND RESID 1341 THROUGH 1356) REMARK 3 ORIGIN FOR THE GROUP (A): -44.4499 7.7154 -47.2679 REMARK 3 T TENSOR REMARK 3 T11: 0.6852 T22: 1.0673 REMARK 3 T33: 1.0083 T12: 0.1021 REMARK 3 T13: -0.1426 T23: -0.2965 REMARK 3 L TENSOR REMARK 3 L11: 8.0384 L22: 4.2276 REMARK 3 L33: 3.2928 L12: -5.4548 REMARK 3 L13: -5.0660 L23: 3.5297 REMARK 3 S TENSOR REMARK 3 S11: -0.6294 S12: 0.8604 S13: 0.1665 REMARK 3 S21: 0.7100 S22: 0.6060 S23: -0.9932 REMARK 3 S31: 1.2869 S32: -0.0825 S33: 0.2527 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XXS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106481. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31807 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.250 REMARK 200 RESOLUTION RANGE LOW (A) : 93.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1R28 REMARK 200 REMARK 200 REMARK: ROD LIKE CRYSTALS, HIGH-SOLVENT CONTENT, POROUS LATTICE. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 82.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M SODIUM CHLORIDE 5%(W/V) PEG 4000 REMARK 280 0.1M TRIS BASE/ HYDROCHLORIC ACID PH 8.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 163.20000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.60000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 122.40000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.80000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 204.00000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 163.20000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.60000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 40.80000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 122.40000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 204.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, G, F, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 PRO A -4 REMARK 465 SER A -3 REMARK 465 SER A 128 REMARK 465 GLU A 129 REMARK 465 GLY B -5 REMARK 465 ALA B 127 REMARK 465 SER B 128 REMARK 465 GLU B 129 REMARK 465 GLY D 1340 REMARK 465 GLY E 4 REMARK 465 PRO E 5 REMARK 465 SER E 128 REMARK 465 GLU E 129 REMARK 465 GLY F -5 REMARK 465 PRO F -4 REMARK 465 SER F -3 REMARK 465 ALA F 127 REMARK 465 SER F 128 REMARK 465 GLU F 129 REMARK 465 GLY H 1340 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 0 40.11 -89.68 REMARK 500 LEU A 2 -156.98 -87.32 REMARK 500 ARG A 13 8.33 56.70 REMARK 500 SER A 39 -118.97 49.09 REMARK 500 ASN A 68 57.42 -104.26 REMARK 500 MET A 114 63.47 -100.69 REMARK 500 SER B 39 -106.92 43.29 REMARK 500 PHE B 61 24.22 -78.02 REMARK 500 ASP E 29 71.51 54.65 REMARK 500 SER E 39 -113.92 46.02 REMARK 500 LYS E 66 36.96 -90.88 REMARK 500 ASN E 68 38.94 -97.69 REMARK 500 LEU F 0 37.04 -77.03 REMARK 500 ARG F 3 -179.14 61.72 REMARK 500 SER F 93 7.93 59.83 REMARK 500 ASN F 96 53.86 -99.13 REMARK 500 REMARK 500 REMARK: NULL DBREF 6XXS A 6 129 UNP P41182 BCL6_HUMAN 6 129 DBREF 6XXS B 6 129 UNP P41182 BCL6_HUMAN 6 129 DBREF 6XXS C 1340 1356 UNP O75376 NCOR1_HUMAN 1340 1356 DBREF 6XXS D 1340 1356 UNP O75376 NCOR1_HUMAN 1340 1356 DBREF 6XXS E 6 129 UNP P41182 BCL6_HUMAN 6 129 DBREF 6XXS G 1340 1356 UNP O75376 NCOR1_HUMAN 1340 1356 DBREF 6XXS F 6 129 UNP P41182 BCL6_HUMAN 6 129 DBREF 6XXS H 1340 1356 UNP O75376 NCOR1_HUMAN 1340 1356 SEQADV 6XXS GLY A -5 UNP P41182 EXPRESSION TAG SEQADV 6XXS PRO A -4 UNP P41182 EXPRESSION TAG SEQADV 6XXS SER A -3 UNP P41182 EXPRESSION TAG SEQADV 6XXS SER A -2 UNP P41182 EXPRESSION TAG SEQADV 6XXS ASP A -1 UNP P41182 EXPRESSION TAG SEQADV 6XXS LEU A 0 UNP P41182 EXPRESSION TAG SEQADV 6XXS TYR A 1 UNP P41182 EXPRESSION TAG SEQADV 6XXS LEU A 2 UNP P41182 EXPRESSION TAG SEQADV 6XXS ARG A 3 UNP P41182 EXPRESSION TAG SEQADV 6XXS PRO A 4 UNP P41182 EXPRESSION TAG SEQADV 6XXS GLY A 5 UNP P41182 EXPRESSION TAG SEQADV 6XXS GLN A 8 UNP P41182 CYS 8 ENGINEERED MUTATION SEQADV 6XXS ARG A 67 UNP P41182 CYS 67 ENGINEERED MUTATION SEQADV 6XXS ASN A 84 UNP P41182 CYS 84 ENGINEERED MUTATION SEQADV 6XXS GLY B -5 UNP P41182 EXPRESSION TAG SEQADV 6XXS PRO B -4 UNP P41182 EXPRESSION TAG SEQADV 6XXS SER B -3 UNP P41182 EXPRESSION TAG SEQADV 6XXS SER B -2 UNP P41182 EXPRESSION TAG SEQADV 6XXS ASP B -1 UNP P41182 EXPRESSION TAG SEQADV 6XXS LEU B 0 UNP P41182 EXPRESSION TAG SEQADV 6XXS TYR B 1 UNP P41182 EXPRESSION TAG SEQADV 6XXS LEU B 2 UNP P41182 EXPRESSION TAG SEQADV 6XXS ARG B 3 UNP P41182 EXPRESSION TAG SEQADV 6XXS PRO B 4 UNP P41182 EXPRESSION TAG SEQADV 6XXS GLY B 5 UNP P41182 EXPRESSION TAG SEQADV 6XXS GLN B 8 UNP P41182 CYS 8 ENGINEERED MUTATION SEQADV 6XXS ARG B 67 UNP P41182 CYS 67 ENGINEERED MUTATION SEQADV 6XXS ASN B 84 UNP P41182 CYS 84 ENGINEERED MUTATION SEQADV 6XXS GLY E 4 UNP P41182 EXPRESSION TAG SEQADV 6XXS PRO E 5 UNP P41182 EXPRESSION TAG SEQADV 6XXS GLN E 8 UNP P41182 CYS 8 ENGINEERED MUTATION SEQADV 6XXS ARG E 67 UNP P41182 CYS 67 ENGINEERED MUTATION SEQADV 6XXS ASN E 84 UNP P41182 CYS 84 ENGINEERED MUTATION SEQADV 6XXS GLY F -5 UNP P41182 EXPRESSION TAG SEQADV 6XXS PRO F -4 UNP P41182 EXPRESSION TAG SEQADV 6XXS SER F -3 UNP P41182 EXPRESSION TAG SEQADV 6XXS SER F -2 UNP P41182 EXPRESSION TAG SEQADV 6XXS ASP F -1 UNP P41182 EXPRESSION TAG SEQADV 6XXS LEU F 0 UNP P41182 EXPRESSION TAG SEQADV 6XXS TYR F 1 UNP P41182 EXPRESSION TAG SEQADV 6XXS LEU F 2 UNP P41182 EXPRESSION TAG SEQADV 6XXS ARG F 3 UNP P41182 EXPRESSION TAG SEQADV 6XXS PRO F 4 UNP P41182 EXPRESSION TAG SEQADV 6XXS GLY F 5 UNP P41182 EXPRESSION TAG SEQADV 6XXS GLN F 8 UNP P41182 CYS 8 ENGINEERED MUTATION SEQADV 6XXS ARG F 67 UNP P41182 CYS 67 ENGINEERED MUTATION SEQADV 6XXS ASN F 84 UNP P41182 CYS 84 ENGINEERED MUTATION SEQRES 1 A 135 GLY PRO SER SER ASP LEU TYR LEU ARG PRO GLY ASP SER SEQRES 2 A 135 GLN ILE GLN PHE THR ARG HIS ALA SER ASP VAL LEU LEU SEQRES 3 A 135 ASN LEU ASN ARG LEU ARG SER ARG ASP ILE LEU THR ASP SEQRES 4 A 135 VAL VAL ILE VAL VAL SER ARG GLU GLN PHE ARG ALA HIS SEQRES 5 A 135 LYS THR VAL LEU MET ALA CYS SER GLY LEU PHE TYR SER SEQRES 6 A 135 ILE PHE THR ASP GLN LEU LYS ARG ASN LEU SER VAL ILE SEQRES 7 A 135 ASN LEU ASP PRO GLU ILE ASN PRO GLU GLY PHE ASN ILE SEQRES 8 A 135 LEU LEU ASP PHE MET TYR THR SER ARG LEU ASN LEU ARG SEQRES 9 A 135 GLU GLY ASN ILE MET ALA VAL MET ALA THR ALA MET TYR SEQRES 10 A 135 LEU GLN MET GLU HIS VAL VAL ASP THR CYS ARG LYS PHE SEQRES 11 A 135 ILE LYS ALA SER GLU SEQRES 1 B 135 GLY PRO SER SER ASP LEU TYR LEU ARG PRO GLY ASP SER SEQRES 2 B 135 GLN ILE GLN PHE THR ARG HIS ALA SER ASP VAL LEU LEU SEQRES 3 B 135 ASN LEU ASN ARG LEU ARG SER ARG ASP ILE LEU THR ASP SEQRES 4 B 135 VAL VAL ILE VAL VAL SER ARG GLU GLN PHE ARG ALA HIS SEQRES 5 B 135 LYS THR VAL LEU MET ALA CYS SER GLY LEU PHE TYR SER SEQRES 6 B 135 ILE PHE THR ASP GLN LEU LYS ARG ASN LEU SER VAL ILE SEQRES 7 B 135 ASN LEU ASP PRO GLU ILE ASN PRO GLU GLY PHE ASN ILE SEQRES 8 B 135 LEU LEU ASP PHE MET TYR THR SER ARG LEU ASN LEU ARG SEQRES 9 B 135 GLU GLY ASN ILE MET ALA VAL MET ALA THR ALA MET TYR SEQRES 10 B 135 LEU GLN MET GLU HIS VAL VAL ASP THR CYS ARG LYS PHE SEQRES 11 B 135 ILE LYS ALA SER GLU SEQRES 1 C 17 GLY ILE THR THR ILE LYS GLU MET GLY ARG SER ILE HIS SEQRES 2 C 17 GLU ILE PRO ARG SEQRES 1 D 17 GLY ILE THR THR ILE LYS GLU MET GLY ARG SER ILE HIS SEQRES 2 D 17 GLU ILE PRO ARG SEQRES 1 E 126 GLY PRO ASP SER GLN ILE GLN PHE THR ARG HIS ALA SER SEQRES 2 E 126 ASP VAL LEU LEU ASN LEU ASN ARG LEU ARG SER ARG ASP SEQRES 3 E 126 ILE LEU THR ASP VAL VAL ILE VAL VAL SER ARG GLU GLN SEQRES 4 E 126 PHE ARG ALA HIS LYS THR VAL LEU MET ALA CYS SER GLY SEQRES 5 E 126 LEU PHE TYR SER ILE PHE THR ASP GLN LEU LYS ARG ASN SEQRES 6 E 126 LEU SER VAL ILE ASN LEU ASP PRO GLU ILE ASN PRO GLU SEQRES 7 E 126 GLY PHE ASN ILE LEU LEU ASP PHE MET TYR THR SER ARG SEQRES 8 E 126 LEU ASN LEU ARG GLU GLY ASN ILE MET ALA VAL MET ALA SEQRES 9 E 126 THR ALA MET TYR LEU GLN MET GLU HIS VAL VAL ASP THR SEQRES 10 E 126 CYS ARG LYS PHE ILE LYS ALA SER GLU SEQRES 1 G 17 GLY ILE THR THR ILE LYS GLU MET GLY ARG SER ILE HIS SEQRES 2 G 17 GLU ILE PRO ARG SEQRES 1 F 135 GLY PRO SER SER ASP LEU TYR LEU ARG PRO GLY ASP SER SEQRES 2 F 135 GLN ILE GLN PHE THR ARG HIS ALA SER ASP VAL LEU LEU SEQRES 3 F 135 ASN LEU ASN ARG LEU ARG SER ARG ASP ILE LEU THR ASP SEQRES 4 F 135 VAL VAL ILE VAL VAL SER ARG GLU GLN PHE ARG ALA HIS SEQRES 5 F 135 LYS THR VAL LEU MET ALA CYS SER GLY LEU PHE TYR SER SEQRES 6 F 135 ILE PHE THR ASP GLN LEU LYS ARG ASN LEU SER VAL ILE SEQRES 7 F 135 ASN LEU ASP PRO GLU ILE ASN PRO GLU GLY PHE ASN ILE SEQRES 8 F 135 LEU LEU ASP PHE MET TYR THR SER ARG LEU ASN LEU ARG SEQRES 9 F 135 GLU GLY ASN ILE MET ALA VAL MET ALA THR ALA MET TYR SEQRES 10 F 135 LEU GLN MET GLU HIS VAL VAL ASP THR CYS ARG LYS PHE SEQRES 11 F 135 ILE LYS ALA SER GLU SEQRES 1 H 17 GLY ILE THR THR ILE LYS GLU MET GLY ARG SER ILE HIS SEQRES 2 H 17 GLU ILE PRO ARG HELIX 1 AA1 ARG A 13 ARG A 28 1 16 HELIX 2 AA2 HIS A 46 SER A 54 1 9 HELIX 3 AA3 SER A 54 ASP A 63 1 10 HELIX 4 AA4 ASN A 79 SER A 93 1 15 HELIX 5 AA5 ASN A 101 LEU A 112 1 12 HELIX 6 AA6 MET A 114 ILE A 125 1 12 HELIX 7 AA7 ARG B 13 ARG B 28 1 16 HELIX 8 AA8 HIS B 46 SER B 54 1 9 HELIX 9 AA9 SER B 54 PHE B 61 1 8 HELIX 10 AB1 ASN B 79 SER B 93 1 15 HELIX 11 AB2 ASN B 101 LEU B 112 1 12 HELIX 12 AB3 MET B 114 LYS B 126 1 13 HELIX 13 AB4 ARG E 13 ARG E 28 1 16 HELIX 14 AB5 HIS E 46 SER E 54 1 9 HELIX 15 AB6 SER E 54 ASP E 63 1 10 HELIX 16 AB7 GLN E 64 ASN E 68 5 5 HELIX 17 AB8 ASN E 79 SER E 93 1 15 HELIX 18 AB9 ASN E 101 LEU E 112 1 12 HELIX 19 AC1 MET E 114 ILE E 125 1 12 HELIX 20 AC2 ARG F 13 ARG F 28 1 16 HELIX 21 AC3 HIS F 46 SER F 54 1 9 HELIX 22 AC4 SER F 54 ASP F 63 1 10 HELIX 23 AC5 ASP F 63 ASN F 68 1 6 HELIX 24 AC6 ASN F 79 SER F 93 1 15 HELIX 25 AC7 ASN F 101 LEU F 112 1 12 HELIX 26 AC8 MET F 114 PHE F 124 1 11 SHEET 1 AA1 3 ARG B 94 LEU B 97 0 SHEET 2 AA1 3 SER A 7 PHE A 11 -1 N ILE A 9 O LEU B 95 SHEET 3 AA1 3 THR D1342 GLU D1346 1 O ILE D1344 N GLN A 10 SHEET 1 AA2 3 GLU A 41 ALA A 45 0 SHEET 2 AA2 3 VAL A 34 VAL A 38 -1 N ILE A 36 O PHE A 43 SHEET 3 AA2 3 VAL A 71 ASN A 73 1 O ILE A 72 N VAL A 37 SHEET 1 AA3 3 ARG A 94 LEU A 97 0 SHEET 2 AA3 3 SER B 7 PHE B 11 -1 O SER B 7 N LEU A 97 SHEET 3 AA3 3 THR C1342 GLU C1346 1 O ILE C1344 N GLN B 10 SHEET 1 AA4 3 GLU B 41 ALA B 45 0 SHEET 2 AA4 3 VAL B 34 VAL B 38 -1 N ILE B 36 O PHE B 43 SHEET 3 AA4 3 VAL B 71 ASN B 73 1 O ILE B 72 N VAL B 37 SHEET 1 AA5 3 ARG F 94 LEU F 95 0 SHEET 2 AA5 3 GLN E 8 PHE E 11 -1 N ILE E 9 O LEU F 95 SHEET 3 AA5 3 THR H1343 GLU H1346 1 O GLU H1346 N GLN E 10 SHEET 1 AA6 3 GLU E 41 ALA E 45 0 SHEET 2 AA6 3 VAL E 34 VAL E 38 -1 N ILE E 36 O PHE E 43 SHEET 3 AA6 3 VAL E 71 ASN E 73 1 O ILE E 72 N VAL E 37 SHEET 1 AA7 3 ARG E 94 LEU E 97 0 SHEET 2 AA7 3 SER F 7 PHE F 11 -1 O ILE F 9 N LEU E 95 SHEET 3 AA7 3 THR G1342 GLU G1346 1 N ILE G1344 O GLN F 10 SHEET 1 AA8 3 GLU F 41 ALA F 45 0 SHEET 2 AA8 3 VAL F 34 VAL F 38 -1 N ILE F 36 O PHE F 43 SHEET 3 AA8 3 VAL F 71 ASN F 73 1 O ILE F 72 N VAL F 37 CRYST1 165.380 165.380 244.800 90.00 90.00 120.00 P 65 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006047 0.003491 0.000000 0.00000 SCALE2 0.000000 0.006982 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004085 0.00000