data_6XY0 # _entry.id 6XY0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.324 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6XY0 WWPDB D_1292106469 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6XY0 _pdbx_database_status.recvd_initial_deposition_date 2020-01-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Edgell, C.L.' 1 0000-0003-0448-122X 'Savery, N.J.' 2 0000-0002-0803-4075 'Woolfson, D.N.' 3 0000-0002-0394-3202 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biochemistry _citation.journal_id_ASTM BICHAW _citation.journal_id_CSD 0033 _citation.journal_id_ISSN 0006-2960 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 59 _citation.language ? _citation.page_first 1087 _citation.page_last 1092 _citation.title 'RobustDe Novo-Designed Homotetrameric Coiled Coils.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.biochem.0c00082 _citation.pdbx_database_id_PubMed 32133841 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Edgell, C.L.' 1 ? primary 'Savery, N.J.' 2 ? primary 'Woolfson, D.N.' 3 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 96.190 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6XY0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 29.460 _cell.length_a_esd ? _cell.length_b 48.550 _cell.length_b_esd ? _cell.length_c 36.570 _cell.length_c_esd ? _cell.volume 52000.498 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6XY0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 3-EK-4 3462.024 4 ? ? ? ? 2 water nat water 18.015 134 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)GAIQQELKAIQQELKAIQWELKAIQQELKG(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XGAIQQELKAIQQELKAIQWELKAIQQELKGX _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 GLY n 1 3 ALA n 1 4 ILE n 1 5 GLN n 1 6 GLN n 1 7 GLU n 1 8 LEU n 1 9 LYS n 1 10 ALA n 1 11 ILE n 1 12 GLN n 1 13 GLN n 1 14 GLU n 1 15 LEU n 1 16 LYS n 1 17 ALA n 1 18 ILE n 1 19 GLN n 1 20 TRP n 1 21 GLU n 1 22 LEU n 1 23 LYS n 1 24 ALA n 1 25 ILE n 1 26 GLN n 1 27 GLN n 1 28 GLU n 1 29 LEU n 1 30 LYS n 1 31 GLY n 1 32 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 32 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6XY0 _struct_ref.pdbx_db_accession 6XY0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6XY0 A 1 ? 32 ? 6XY0 0 ? 31 ? 0 31 2 1 6XY0 B 1 ? 32 ? 6XY0 0 ? 31 ? 0 31 3 1 6XY0 C 1 ? 32 ? 6XY0 0 ? 31 ? 0 31 4 1 6XY0 D 1 ? 32 ? 6XY0 0 ? 31 ? 0 31 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6XY0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.88 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 34.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M sodium HEPES, 0.2 sodium citrate tribasic dihydrate, 20 % 2-propanol, pH 7.5, supplemented with 25% glycerol for cryo-protection ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-05-14 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 12.88 _reflns.entry_id 6XY0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.11 _reflns.d_resolution_low 48.55 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 38599 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.11 _reflns_shell.d_res_low 1.12 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1806 _reflns_shell.percent_possible_all 90.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.629 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 20.42 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6XY0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.11 _refine.ls_d_res_low 29.29 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 38546 _refine.ls_number_reflns_R_free 3797 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.18 _refine.ls_percent_reflns_R_free 9.85 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1674 _refine.ls_R_factor_R_free 0.1994 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1639 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 19.8101 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1159 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.11 _refine_hist.d_res_low 29.29 _refine_hist.number_atoms_solvent 134 _refine_hist.number_atoms_total 1111 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 977 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0045 ? 1023 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.6178 ? 1372 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0439 ? 150 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0026 ? 181 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 9.9085 ? 672 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.11 1.12 . . 146 1212 90.53 . . . 0.3210 . 0.3104 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.12 1.13 . . 134 1253 90.01 . . . 0.2694 . 0.2789 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.13 1.15 . . 125 1217 90.92 . . . 0.2777 . 0.2504 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.15 1.17 . . 135 1224 90.54 . . . 0.2778 . 0.2422 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.17 1.18 . . 147 1273 92.09 . . . 0.2621 . 0.2347 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.18 1.20 . . 134 1195 90.72 . . . 0.2638 . 0.2106 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.20 1.22 . . 139 1282 92.63 . . . 0.2380 . 0.1957 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.22 1.24 . . 141 1230 91.58 . . . 0.2356 . 0.1949 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.24 1.27 . . 134 1284 92.62 . . . 0.2052 . 0.1795 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.27 1.29 . . 137 1259 93.32 . . . 0.2110 . 0.1586 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.29 1.32 . . 140 1269 93.13 . . . 0.2267 . 0.1599 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.32 1.35 . . 133 1288 93.43 . . . 0.2006 . 0.1611 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.35 1.38 . . 112 1275 93.84 . . . 0.1751 . 0.1590 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.38 1.41 . . 141 1326 94.46 . . . 0.1711 . 0.1525 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.41 1.45 . . 144 1248 94.25 . . . 0.2011 . 0.1469 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.45 1.49 . . 157 1286 94.62 . . . 0.1704 . 0.1445 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.49 1.54 . . 135 1302 94.85 . . . 0.1856 . 0.1356 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.54 1.60 . . 147 1298 95.25 . . . 0.1623 . 0.1315 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.60 1.66 . . 148 1290 95.55 . . . 0.1676 . 0.1356 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.66 1.73 . . 143 1344 96.31 . . . 0.2119 . 0.1457 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.73 1.83 . . 146 1310 96.42 . . . 0.1871 . 0.1505 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.83 1.94 . . 164 1306 96.46 . . . 0.1818 . 0.1562 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.94 2.09 . . 147 1319 97.28 . . . 0.1980 . 0.1568 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.09 2.30 . . 132 1347 97.30 . . . 0.2098 . 0.1555 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.30 2.63 . . 162 1334 97.52 . . . 0.1861 . 0.1601 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.63 3.32 . . 132 1378 98.37 . . . 0.2056 . 0.1630 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.32 29.29 . . 142 1400 98.66 . . . 0.1979 . 0.1722 . . . . . . . . . . . # _struct.entry_id 6XY0 _struct.title 'Crystal structure of a de novo designed parallel four-helix coiled coil, 3-EK-4' _struct.pdbx_descriptor 3-EK-4 _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6XY0 _struct_keywords.text 'coiled coil, tetramer, parallel, de novo protein' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 2 ? GLY A 31 ? GLY A 1 GLY A 30 1 ? 30 HELX_P HELX_P2 AA2 GLY B 2 ? GLY B 31 ? GLY B 1 GLY B 30 1 ? 30 HELX_P HELX_P3 AA3 GLY C 2 ? GLY C 31 ? GLY C 1 GLY C 30 1 ? 30 HELX_P HELX_P4 AA4 ALA D 3 ? GLY D 31 ? ALA D 2 GLY D 30 1 ? 29 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A ACE 1 C ? ? ? 1_555 A GLY 2 N ? ? A ACE 0 A GLY 1 1_555 ? ? ? ? ? ? ? 1.332 ? covale2 covale both ? B ACE 1 C ? ? ? 1_555 B GLY 2 N ? ? B ACE 0 B GLY 1 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale both ? C ACE 1 C ? ? ? 1_555 C GLY 2 N ? ? C ACE 0 C GLY 1 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale both ? C GLY 31 C ? ? ? 1_555 C NH2 32 N ? ? C GLY 30 C NH2 31 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale both ? D ACE 1 C ? ? ? 1_555 D GLY 2 N ? ? D ACE 0 D GLY 1 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6XY0 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.033944 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003682 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020597 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027505 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 0 0 ACE ACE A . n A 1 2 GLY 2 1 1 GLY GLY A . n A 1 3 ALA 3 2 2 ALA ALA A . n A 1 4 ILE 4 3 3 ILE ILE A . n A 1 5 GLN 5 4 4 GLN GLN A . n A 1 6 GLN 6 5 5 GLN GLN A . n A 1 7 GLU 7 6 6 GLU GLU A . n A 1 8 LEU 8 7 7 LEU LEU A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 ALA 10 9 9 ALA ALA A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 GLN 12 11 11 GLN GLN A . n A 1 13 GLN 13 12 12 GLN GLN A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 LYS 16 15 15 LYS LYS A . n A 1 17 ALA 17 16 16 ALA ALA A . n A 1 18 ILE 18 17 17 ILE ILE A . n A 1 19 GLN 19 18 18 GLN GLN A . n A 1 20 TRP 20 19 19 TRP TRP A . n A 1 21 GLU 21 20 20 GLU GLU A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 ALA 24 23 23 ALA ALA A . n A 1 25 ILE 25 24 24 ILE ILE A . n A 1 26 GLN 26 25 25 GLN GLN A . n A 1 27 GLN 27 26 26 GLN GLN A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 LEU 29 28 28 LEU LEU A . n A 1 30 LYS 30 29 29 LYS LYS A . n A 1 31 GLY 31 30 30 GLY GLY A . n A 1 32 NH2 32 31 ? ? ? A . n B 1 1 ACE 1 0 0 ACE ACE B . n B 1 2 GLY 2 1 1 GLY GLY B . n B 1 3 ALA 3 2 2 ALA ALA B . n B 1 4 ILE 4 3 3 ILE ILE B . n B 1 5 GLN 5 4 4 GLN GLN B . n B 1 6 GLN 6 5 5 GLN GLN B . n B 1 7 GLU 7 6 6 GLU GLU B . n B 1 8 LEU 8 7 7 LEU LEU B . n B 1 9 LYS 9 8 8 LYS LYS B . n B 1 10 ALA 10 9 9 ALA ALA B . n B 1 11 ILE 11 10 10 ILE ILE B . n B 1 12 GLN 12 11 11 GLN GLN B . n B 1 13 GLN 13 12 12 GLN GLN B . n B 1 14 GLU 14 13 13 GLU GLU B . n B 1 15 LEU 15 14 14 LEU LEU B . n B 1 16 LYS 16 15 15 LYS LYS B . n B 1 17 ALA 17 16 16 ALA ALA B . n B 1 18 ILE 18 17 17 ILE ILE B . n B 1 19 GLN 19 18 18 GLN GLN B . n B 1 20 TRP 20 19 19 TRP TRP B . n B 1 21 GLU 21 20 20 GLU GLU B . n B 1 22 LEU 22 21 21 LEU LEU B . n B 1 23 LYS 23 22 22 LYS LYS B . n B 1 24 ALA 24 23 23 ALA ALA B . n B 1 25 ILE 25 24 24 ILE ILE B . n B 1 26 GLN 26 25 25 GLN GLN B . n B 1 27 GLN 27 26 26 GLN GLN B . n B 1 28 GLU 28 27 27 GLU GLU B . n B 1 29 LEU 29 28 28 LEU LEU B . n B 1 30 LYS 30 29 29 LYS LYS B . n B 1 31 GLY 31 30 30 GLY GLY B . n B 1 32 NH2 32 31 ? ? ? B . n C 1 1 ACE 1 0 0 ACE ACE C . n C 1 2 GLY 2 1 1 GLY GLY C . n C 1 3 ALA 3 2 2 ALA ALA C . n C 1 4 ILE 4 3 3 ILE ILE C . n C 1 5 GLN 5 4 4 GLN GLN C . n C 1 6 GLN 6 5 5 GLN GLN C . n C 1 7 GLU 7 6 6 GLU GLU C . n C 1 8 LEU 8 7 7 LEU LEU C . n C 1 9 LYS 9 8 8 LYS LYS C . n C 1 10 ALA 10 9 9 ALA ALA C . n C 1 11 ILE 11 10 10 ILE ILE C . n C 1 12 GLN 12 11 11 GLN GLN C . n C 1 13 GLN 13 12 12 GLN GLN C . n C 1 14 GLU 14 13 13 GLU GLU C . n C 1 15 LEU 15 14 14 LEU LEU C . n C 1 16 LYS 16 15 15 LYS LYS C . n C 1 17 ALA 17 16 16 ALA ALA C . n C 1 18 ILE 18 17 17 ILE ILE C . n C 1 19 GLN 19 18 18 GLN GLN C . n C 1 20 TRP 20 19 19 TRP TRP C . n C 1 21 GLU 21 20 20 GLU GLU C . n C 1 22 LEU 22 21 21 LEU LEU C . n C 1 23 LYS 23 22 22 LYS LYS C . n C 1 24 ALA 24 23 23 ALA ALA C . n C 1 25 ILE 25 24 24 ILE ILE C . n C 1 26 GLN 26 25 25 GLN GLN C . n C 1 27 GLN 27 26 26 GLN GLN C . n C 1 28 GLU 28 27 27 GLU GLU C . n C 1 29 LEU 29 28 28 LEU LEU C . n C 1 30 LYS 30 29 29 LYS LYS C . n C 1 31 GLY 31 30 30 GLY GLY C . n C 1 32 NH2 32 31 31 NH2 NH2 C . n D 1 1 ACE 1 0 0 ACE ACE D . n D 1 2 GLY 2 1 1 GLY GLY D . n D 1 3 ALA 3 2 2 ALA ALA D . n D 1 4 ILE 4 3 3 ILE ILE D . n D 1 5 GLN 5 4 4 GLN GLN D . n D 1 6 GLN 6 5 5 GLN GLN D . n D 1 7 GLU 7 6 6 GLU GLU D . n D 1 8 LEU 8 7 7 LEU LEU D . n D 1 9 LYS 9 8 8 LYS LYS D . n D 1 10 ALA 10 9 9 ALA ALA D . n D 1 11 ILE 11 10 10 ILE ILE D . n D 1 12 GLN 12 11 11 GLN GLN D . n D 1 13 GLN 13 12 12 GLN GLN D . n D 1 14 GLU 14 13 13 GLU GLU D . n D 1 15 LEU 15 14 14 LEU LEU D . n D 1 16 LYS 16 15 15 LYS LYS D . n D 1 17 ALA 17 16 16 ALA ALA D . n D 1 18 ILE 18 17 17 ILE ILE D . n D 1 19 GLN 19 18 18 GLN GLN D . n D 1 20 TRP 20 19 19 TRP TRP D . n D 1 21 GLU 21 20 20 GLU GLU D . n D 1 22 LEU 22 21 21 LEU LEU D . n D 1 23 LYS 23 22 22 LYS LYS D . n D 1 24 ALA 24 23 23 ALA ALA D . n D 1 25 ILE 25 24 24 ILE ILE D . n D 1 26 GLN 26 25 25 GLN GLN D . n D 1 27 GLN 27 26 26 GLN GLN D . n D 1 28 GLU 28 27 27 GLU GLU D . n D 1 29 LEU 29 28 28 LEU LEU D . n D 1 30 LYS 30 29 29 LYS LYS D . n D 1 31 GLY 31 30 30 GLY GLY D . n D 1 32 NH2 32 31 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HOH 1 101 25 HOH HOH A . E 2 HOH 2 102 111 HOH HOH A . E 2 HOH 3 103 105 HOH HOH A . E 2 HOH 4 104 30 HOH HOH A . E 2 HOH 5 105 4 HOH HOH A . E 2 HOH 6 106 32 HOH HOH A . E 2 HOH 7 107 70 HOH HOH A . E 2 HOH 8 108 116 HOH HOH A . E 2 HOH 9 109 53 HOH HOH A . E 2 HOH 10 110 50 HOH HOH A . E 2 HOH 11 111 65 HOH HOH A . E 2 HOH 12 112 55 HOH HOH A . E 2 HOH 13 113 29 HOH HOH A . E 2 HOH 14 114 76 HOH HOH A . E 2 HOH 15 115 109 HOH HOH A . E 2 HOH 16 116 97 HOH HOH A . E 2 HOH 17 117 5 HOH HOH A . E 2 HOH 18 118 8 HOH HOH A . E 2 HOH 19 119 1 HOH HOH A . E 2 HOH 20 120 67 HOH HOH A . E 2 HOH 21 121 79 HOH HOH A . E 2 HOH 22 122 7 HOH HOH A . E 2 HOH 23 123 26 HOH HOH A . E 2 HOH 24 124 6 HOH HOH A . E 2 HOH 25 125 134 HOH HOH A . E 2 HOH 26 126 71 HOH HOH A . E 2 HOH 27 127 3 HOH HOH A . E 2 HOH 28 128 113 HOH HOH A . E 2 HOH 29 129 85 HOH HOH A . E 2 HOH 30 130 118 HOH HOH A . E 2 HOH 31 131 27 HOH HOH A . E 2 HOH 32 132 90 HOH HOH A . E 2 HOH 33 133 119 HOH HOH A . E 2 HOH 34 134 95 HOH HOH A . E 2 HOH 35 135 135 HOH HOH A . E 2 HOH 36 136 28 HOH HOH A . E 2 HOH 37 137 92 HOH HOH A . E 2 HOH 38 138 2 HOH HOH A . E 2 HOH 39 139 47 HOH HOH A . F 2 HOH 1 101 96 HOH HOH B . F 2 HOH 2 102 91 HOH HOH B . F 2 HOH 3 103 120 HOH HOH B . F 2 HOH 4 104 104 HOH HOH B . F 2 HOH 5 105 24 HOH HOH B . F 2 HOH 6 106 22 HOH HOH B . F 2 HOH 7 107 63 HOH HOH B . F 2 HOH 8 108 130 HOH HOH B . F 2 HOH 9 109 132 HOH HOH B . F 2 HOH 10 110 15 HOH HOH B . F 2 HOH 11 111 60 HOH HOH B . F 2 HOH 12 112 12 HOH HOH B . F 2 HOH 13 113 23 HOH HOH B . F 2 HOH 14 114 121 HOH HOH B . F 2 HOH 15 115 115 HOH HOH B . F 2 HOH 16 116 127 HOH HOH B . F 2 HOH 17 117 13 HOH HOH B . F 2 HOH 18 118 54 HOH HOH B . F 2 HOH 19 119 94 HOH HOH B . F 2 HOH 20 120 66 HOH HOH B . F 2 HOH 21 121 99 HOH HOH B . F 2 HOH 22 122 123 HOH HOH B . F 2 HOH 23 123 61 HOH HOH B . F 2 HOH 24 124 103 HOH HOH B . F 2 HOH 25 125 14 HOH HOH B . F 2 HOH 26 126 38 HOH HOH B . F 2 HOH 27 127 128 HOH HOH B . F 2 HOH 28 128 122 HOH HOH B . F 2 HOH 29 129 110 HOH HOH B . F 2 HOH 30 130 129 HOH HOH B . F 2 HOH 31 131 126 HOH HOH B . F 2 HOH 32 132 125 HOH HOH B . F 2 HOH 33 133 72 HOH HOH B . G 2 HOH 1 101 39 HOH HOH C . G 2 HOH 2 102 84 HOH HOH C . G 2 HOH 3 103 51 HOH HOH C . G 2 HOH 4 104 37 HOH HOH C . G 2 HOH 5 105 52 HOH HOH C . G 2 HOH 6 106 83 HOH HOH C . G 2 HOH 7 107 75 HOH HOH C . G 2 HOH 8 108 78 HOH HOH C . G 2 HOH 9 109 62 HOH HOH C . G 2 HOH 10 110 56 HOH HOH C . G 2 HOH 11 111 48 HOH HOH C . G 2 HOH 12 112 35 HOH HOH C . G 2 HOH 13 113 10 HOH HOH C . G 2 HOH 14 114 68 HOH HOH C . G 2 HOH 15 115 89 HOH HOH C . G 2 HOH 16 116 49 HOH HOH C . G 2 HOH 17 117 11 HOH HOH C . G 2 HOH 18 118 36 HOH HOH C . G 2 HOH 19 119 58 HOH HOH C . G 2 HOH 20 120 77 HOH HOH C . G 2 HOH 21 121 98 HOH HOH C . G 2 HOH 22 122 108 HOH HOH C . G 2 HOH 23 123 107 HOH HOH C . G 2 HOH 24 124 57 HOH HOH C . G 2 HOH 25 125 131 HOH HOH C . G 2 HOH 26 126 33 HOH HOH C . G 2 HOH 27 127 74 HOH HOH C . G 2 HOH 28 128 31 HOH HOH C . G 2 HOH 29 129 112 HOH HOH C . G 2 HOH 30 130 69 HOH HOH C . G 2 HOH 31 131 34 HOH HOH C . G 2 HOH 32 132 59 HOH HOH C . G 2 HOH 33 133 9 HOH HOH C . G 2 HOH 34 134 86 HOH HOH C . G 2 HOH 35 135 82 HOH HOH C . H 2 HOH 1 101 64 HOH HOH D . H 2 HOH 2 102 106 HOH HOH D . H 2 HOH 3 103 80 HOH HOH D . H 2 HOH 4 104 17 HOH HOH D . H 2 HOH 5 105 19 HOH HOH D . H 2 HOH 6 106 93 HOH HOH D . H 2 HOH 7 107 81 HOH HOH D . H 2 HOH 8 108 117 HOH HOH D . H 2 HOH 9 109 100 HOH HOH D . H 2 HOH 10 110 20 HOH HOH D . H 2 HOH 11 111 45 HOH HOH D . H 2 HOH 12 112 40 HOH HOH D . H 2 HOH 13 113 18 HOH HOH D . H 2 HOH 14 114 73 HOH HOH D . H 2 HOH 15 115 41 HOH HOH D . H 2 HOH 16 116 42 HOH HOH D . H 2 HOH 17 117 21 HOH HOH D . H 2 HOH 18 118 101 HOH HOH D . H 2 HOH 19 119 87 HOH HOH D . H 2 HOH 20 120 16 HOH HOH D . H 2 HOH 21 121 88 HOH HOH D . H 2 HOH 22 122 133 HOH HOH D . H 2 HOH 23 123 46 HOH HOH D . H 2 HOH 24 124 102 HOH HOH D . H 2 HOH 25 125 124 HOH HOH D . H 2 HOH 26 126 43 HOH HOH D . H 2 HOH 27 127 44 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5850 ? 1 MORE -51 ? 1 'SSA (A^2)' 7460 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-03-18 2 'Structure model' 1 1 2020-03-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16-3546 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? 7.2.2 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.7.0 4 # _pdbx_entry_details.entry_id 6XY0 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 B GLN 11 ? ? O B HOH 101 ? ? 2.14 2 1 OE1 B GLU 6 ? A O B HOH 102 ? ? 2.15 3 1 NE2 A GLN 18 ? A O A HOH 101 ? ? 2.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A NH2 31 ? A NH2 32 2 1 Y 1 B NH2 31 ? B NH2 32 3 1 Y 1 D NH2 31 ? D NH2 32 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' BB/S002820/1 1 'Biotechnology and Biological Sciences Research Council (BBSRC)' 'United Kingdom' EP/L016494/1 2 'Engineering and Physical Sciences Research Council' 'United Kingdom' EP/L016494/1 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'equilibrium centrifugation' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 1 21 1' _space_group.name_Hall 'P 2yb' _space_group.IT_number 4 _space_group.crystal_system monoclinic _space_group.id 1 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y+1/2,-z #