HEADER HYDROLASE 31-JAN-20 6XYS TITLE UPDATE OF NATIVE ACETYLCHOLINESTERASE FROM DROSOPHILA MELANOGASTER CAVEAT 6XYS NAG B 2 HAS WRONG CHIRALITY AT ATOM C1 BMA B 4 HAS WRONG CAVEAT 2 6XYS CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLCHOLINESTERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACHE; COMPND 5 EC: 3.1.1.7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: ACE, CG17907; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: SCHNEIDER LINE 2; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID DNA; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: S2-SEC 1/3 KEYWDS ACETYLCHOLINESTERASE, INSECT, CATALYTIC, INTERMEDIATES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.NACHON,J.L.SUSSMAN REVDAT 4 24-JAN-24 6XYS 1 REMARK REVDAT 3 05-MAY-21 6XYS 1 REMARK HETSYN LINK ATOM REVDAT 2 29-JUL-20 6XYS 1 CAVEAT COMPND REMARK HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 18-MAR-20 6XYS 0 SPRSDE 18-MAR-20 6XYS 1QO9 JRNL AUTH F.NACHON,T.L.ROSENBERRY,I.SILMAN,J.L.SUSSMAN JRNL TITL A SECOND LOOK AT THE CRYSTAL STRUCTURES OFDROSOPHILA JRNL TITL 2 MELANOGASTERACETYLCHOLINESTERASE IN COMPLEX WITH TACRINE JRNL TITL 3 DERIVATIVES PROVIDES INSIGHTS CONCERNING CATALYTIC JRNL TITL 4 INTERMEDIATES AND THE DESIGN OF SPECIFIC INSECTICIDES. JRNL REF MOLECULES V. 25 2020 JRNL REFN ESSN 1420-3049 JRNL PMID 32155891 JRNL DOI 10.3390/MOLECULES25051198 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.HAREL,G.KRYGER,T.L.ROSENBERRY,W.D.MALLENDER,T.LEWIS, REMARK 1 AUTH 2 R.J.FLETCHER,J.M.GUSS,I.SILMAN,J.L.SUSSMAN REMARK 1 TITL THREE-DIMENSIONAL STRUCTURES OF DROSOPHILA MELANOGASTER REMARK 1 TITL 2 ACETYLCHOLINESTERASE AND OF ITS COMPLEXES WITH TWO POTENT REMARK 1 TITL 3 INHIBITORS. REMARK 1 REF PROTEIN SCI. V. 9 1063 2000 REMARK 1 REFN ISSN 0961-8368 REMARK 1 PMID 10892800 REMARK 1 DOI 10.1110/PS.9.6.1063 REMARK 2 REMARK 2 RESOLUTION. 2.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 26738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1338 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.1800 - 5.2800 0.97 2694 142 0.1736 0.1928 REMARK 3 2 5.2800 - 4.2000 0.99 2588 136 0.1646 0.2317 REMARK 3 3 4.2000 - 3.6700 0.99 2576 136 0.1971 0.2727 REMARK 3 4 3.6700 - 3.3300 0.99 2551 134 0.2469 0.3641 REMARK 3 5 3.3300 - 3.0900 1.00 2547 135 0.2885 0.3737 REMARK 3 6 3.0900 - 2.9100 1.00 2521 132 0.3123 0.3960 REMARK 3 7 2.9100 - 2.7600 0.99 2520 134 0.3161 0.3719 REMARK 3 8 2.7600 - 2.6400 0.99 2496 131 0.3357 0.4093 REMARK 3 9 2.6400 - 2.5400 0.99 2504 132 0.3526 0.4409 REMARK 3 10 2.5400 - 2.4600 0.95 2403 126 0.3994 0.5233 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.442 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4427 REMARK 3 ANGLE : 1.044 6026 REMARK 3 CHIRALITY : 0.056 638 REMARK 3 PLANARITY : 0.007 783 REMARK 3 DIHEDRAL : 7.681 3561 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6830 61.2624 -7.5890 REMARK 3 T TENSOR REMARK 3 T11: 0.7632 T22: 0.8266 REMARK 3 T33: 0.5430 T12: -0.2579 REMARK 3 T13: 0.1959 T23: -0.0706 REMARK 3 L TENSOR REMARK 3 L11: 2.6415 L22: 2.3309 REMARK 3 L33: 3.6014 L12: -0.6662 REMARK 3 L13: -0.2308 L23: 0.7659 REMARK 3 S TENSOR REMARK 3 S11: 0.4753 S12: 0.3436 S13: 0.1676 REMARK 3 S21: -1.0063 S22: -0.0360 S23: -0.3271 REMARK 3 S31: -0.7755 S32: 1.3245 S33: -0.1818 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7086 61.6307 2.9363 REMARK 3 T TENSOR REMARK 3 T11: 0.5204 T22: 0.4012 REMARK 3 T33: 0.4651 T12: -0.1633 REMARK 3 T13: 0.0539 T23: -0.0885 REMARK 3 L TENSOR REMARK 3 L11: 2.0066 L22: 3.1076 REMARK 3 L33: 4.5143 L12: -1.1492 REMARK 3 L13: -0.2085 L23: 0.5012 REMARK 3 S TENSOR REMARK 3 S11: 0.1669 S12: -0.0664 S13: 0.1285 REMARK 3 S21: -0.5914 S22: 0.0984 S23: 0.0465 REMARK 3 S31: -0.8202 S32: 0.8442 S33: -0.1299 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 290 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9854 73.0646 8.2711 REMARK 3 T TENSOR REMARK 3 T11: 1.0431 T22: 0.4697 REMARK 3 T33: 0.6005 T12: -0.3067 REMARK 3 T13: 0.1213 T23: -0.0827 REMARK 3 L TENSOR REMARK 3 L11: 1.9121 L22: 1.9024 REMARK 3 L33: 3.2924 L12: -0.7358 REMARK 3 L13: 0.1496 L23: -0.0034 REMARK 3 S TENSOR REMARK 3 S11: -0.0455 S12: -0.1075 S13: 0.4771 REMARK 3 S21: -0.3384 S22: 0.1423 S23: -0.2176 REMARK 3 S31: -1.5201 S32: 0.8372 S33: -0.0840 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 376 THROUGH 499 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8334 65.2159 22.7449 REMARK 3 T TENSOR REMARK 3 T11: 0.6375 T22: 1.1942 REMARK 3 T33: 0.6610 T12: -0.2145 REMARK 3 T13: 0.0603 T23: -0.2331 REMARK 3 L TENSOR REMARK 3 L11: 1.2650 L22: 1.8506 REMARK 3 L33: 2.1336 L12: -0.6171 REMARK 3 L13: 0.1477 L23: 0.5357 REMARK 3 S TENSOR REMARK 3 S11: -0.1498 S12: -0.1289 S13: 0.2926 REMARK 3 S21: 0.0407 S22: 0.5146 S23: -0.5664 REMARK 3 S31: -0.6561 S32: 1.1918 S33: -0.2971 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 500 THROUGH 573 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8591 51.3858 23.6718 REMARK 3 T TENSOR REMARK 3 T11: 0.3681 T22: 0.9799 REMARK 3 T33: 0.5214 T12: 0.1549 REMARK 3 T13: 0.0325 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: 1.6718 L22: 1.1280 REMARK 3 L33: 3.7980 L12: 0.1691 REMARK 3 L13: -0.1107 L23: 0.3134 REMARK 3 S TENSOR REMARK 3 S11: -0.2620 S12: -0.3513 S13: -0.1927 REMARK 3 S21: 0.1224 S22: 0.3462 S23: -0.2167 REMARK 3 S31: 0.3685 S32: 1.1307 S33: -0.2148 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XYS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106538. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JAN-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 5.2R REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26803 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.455 REMARK 200 RESOLUTION RANGE LOW (A) : 34.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.04870 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.33500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1QO9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% MPEG2000, 0.1 M AMMONIUM SULFATE, REMARK 280 0.03 M LEUCINE, 0.1 M ACETATE, PH 4.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.50500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 47.31000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 47.31000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 119.25750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 47.31000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 47.31000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.75250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 47.31000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.31000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 119.25750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 47.31000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.31000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.75250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 79.50500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 94.62000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 94.62000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 79.50500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 708 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 1 REMARK 465 ILE A 2 REMARK 465 LYS A 103 REMARK 465 ALA A 104 REMARK 465 ARG A 105 REMARK 465 LEU A 106 REMARK 465 ARG A 107 REMARK 465 HIS A 108 REMARK 465 GLY A 109 REMARK 465 ARG A 110 REMARK 465 GLY A 111 REMARK 465 ALA A 112 REMARK 465 ASN A 113 REMARK 465 GLY A 114 REMARK 465 GLY A 115 REMARK 465 GLU A 116 REMARK 465 HIS A 117 REMARK 465 PRO A 118 REMARK 465 ASN A 119 REMARK 465 GLY A 120 REMARK 465 LYS A 121 REMARK 465 GLN A 122 REMARK 465 ALA A 123 REMARK 465 ASP A 124 REMARK 465 THR A 125 REMARK 465 ASP A 126 REMARK 465 HIS A 127 REMARK 465 LEU A 128 REMARK 465 ILE A 129 REMARK 465 HIS A 130 REMARK 465 ASN A 131 REMARK 465 GLY A 132 REMARK 465 ASN A 133 REMARK 465 PRO A 134 REMARK 465 GLN A 135 REMARK 465 ASN A 136 REMARK 465 THR A 137 REMARK 465 THR A 138 REMARK 465 ALA A 574 REMARK 465 GLY A 575 REMARK 465 THR A 576 REMARK 465 CYS A 577 REMARK 465 ASP A 578 REMARK 465 GLY A 579 REMARK 465 ASP A 580 REMARK 465 SER A 581 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 MAN B 3 O5 BMA B 4 1.93 REMARK 500 OD2 ASP A 482 O HOH A 701 2.07 REMARK 500 OH TYR A 461 O HOH A 702 2.07 REMARK 500 O GLU A 72 O HOH A 703 2.11 REMARK 500 OD1 ASP A 92 OH TYR A 95 2.11 REMARK 500 NH1 ARG A 254 O HOH A 704 2.12 REMARK 500 OD1 ASP A 378 O HOH A 705 2.13 REMARK 500 O PHE A 380 O HOH A 706 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N HIS A 303 NZ LYS A 547 3554 1.89 REMARK 500 OD1 ASN A 300 CE LYS A 547 3554 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 40 -109.41 57.73 REMARK 500 PHE A 44 -3.65 76.22 REMARK 500 ALA A 59 54.82 -106.02 REMARK 500 GLU A 72 54.16 -141.18 REMARK 500 PHE A 77 105.41 -37.89 REMARK 500 ASP A 92 90.31 -62.54 REMARK 500 CYS A 93 -9.80 -151.05 REMARK 500 MET A 153 -9.21 -150.59 REMARK 500 PHE A 178 143.71 -173.71 REMARK 500 ALA A 202 67.44 -152.27 REMARK 500 TRP A 231 40.83 -86.72 REMARK 500 SER A 238 -126.90 63.33 REMARK 500 ASN A 288 -19.19 -144.18 REMARK 500 ASN A 293 -65.06 80.36 REMARK 500 ALA A 294 -20.04 69.46 REMARK 500 LEU A 297 -13.73 -45.52 REMARK 500 ASN A 300 78.65 -156.90 REMARK 500 PRO A 301 -89.76 -63.91 REMARK 500 ALA A 302 7.64 -55.15 REMARK 500 ALA A 339 -92.05 -139.89 REMARK 500 LEU A 354 34.07 -95.42 REMARK 500 GLU A 367 -69.21 -28.37 REMARK 500 ALA A 387 96.26 -69.98 REMARK 500 PRO A 389 -170.73 -69.62 REMARK 500 LYS A 403 2.21 -66.67 REMARK 500 ASN A 422 109.10 -50.94 REMARK 500 PHE A 440 -68.73 -130.05 REMARK 500 TRP A 529 80.62 -161.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN A 288 ASP A 289 147.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QO9 RELATED DB: PDB REMARK 900 EARLIER MODEL DBREF 6XYS A 1 581 UNP P07140 ACES_DROME 39 619 SEQRES 1 A 581 VAL ILE ASP ARG LEU VAL VAL GLN THR SER SER GLY PRO SEQRES 2 A 581 VAL ARG GLY ARG SER VAL THR VAL GLN GLY ARG GLU VAL SEQRES 3 A 581 HIS VAL TYR THR GLY ILE PRO TYR ALA LYS PRO PRO VAL SEQRES 4 A 581 GLU ASP LEU ARG PHE ARG LYS PRO VAL PRO ALA GLU PRO SEQRES 5 A 581 TRP HIS GLY VAL LEU ASP ALA THR GLY LEU SER ALA THR SEQRES 6 A 581 CYS VAL GLN GLU ARG TYR GLU TYR PHE PRO GLY PHE SER SEQRES 7 A 581 GLY GLU GLU ILE TRP ASN PRO ASN THR ASN VAL SER GLU SEQRES 8 A 581 ASP CYS LEU TYR ILE ASN VAL TRP ALA PRO ALA LYS ALA SEQRES 9 A 581 ARG LEU ARG HIS GLY ARG GLY ALA ASN GLY GLY GLU HIS SEQRES 10 A 581 PRO ASN GLY LYS GLN ALA ASP THR ASP HIS LEU ILE HIS SEQRES 11 A 581 ASN GLY ASN PRO GLN ASN THR THR ASN GLY LEU PRO ILE SEQRES 12 A 581 LEU ILE TRP ILE TYR GLY GLY GLY PHE MET THR GLY SER SEQRES 13 A 581 ALA THR LEU ASP ILE TYR ASN ALA ASP ILE MET ALA ALA SEQRES 14 A 581 VAL GLY ASN VAL ILE VAL ALA SER PHE GLN TYR ARG VAL SEQRES 15 A 581 GLY ALA PHE GLY PHE LEU HIS LEU ALA PRO GLU MET PRO SEQRES 16 A 581 SER GLU PHE ALA GLU GLU ALA PRO GLY ASN VAL GLY LEU SEQRES 17 A 581 TRP ASP GLN ALA LEU ALA ILE ARG TRP LEU LYS ASP ASN SEQRES 18 A 581 ALA HIS ALA PHE GLY GLY ASN PRO GLU TRP MET THR LEU SEQRES 19 A 581 PHE GLY GLU SER ALA GLY SER SER SER VAL ASN ALA GLN SEQRES 20 A 581 LEU MET SER PRO VAL THR ARG GLY LEU VAL LYS ARG GLY SEQRES 21 A 581 MET MET GLN SER GLY THR MET ASN ALA PRO TRP SER HIS SEQRES 22 A 581 MET THR SER GLU LYS ALA VAL GLU ILE GLY LYS ALA LEU SEQRES 23 A 581 ILE ASN ASP CYS ASN CYS ASN ALA SER MET LEU LYS THR SEQRES 24 A 581 ASN PRO ALA HIS VAL MET SER CYS MET ARG SER VAL ASP SEQRES 25 A 581 ALA LYS THR ILE SER VAL GLN GLN TRP ASN SER TYR SER SEQRES 26 A 581 GLY ILE LEU SER PHE PRO SER ALA PRO THR ILE ASP GLY SEQRES 27 A 581 ALA PHE LEU PRO ALA ASP PRO MET THR LEU MET LYS THR SEQRES 28 A 581 ALA ASP LEU LYS ASP TYR ASP ILE LEU MET GLY ASN VAL SEQRES 29 A 581 ARG ASP GLU GLY THR TYR PHE LEU LEU TYR ASP PHE ILE SEQRES 30 A 581 ASP TYR PHE ASP LYS ASP ASP ALA THR ALA LEU PRO ARG SEQRES 31 A 581 ASP LYS TYR LEU GLU ILE MET ASN ASN ILE PHE GLY LYS SEQRES 32 A 581 ALA THR GLN ALA GLU ARG GLU ALA ILE ILE PHE GLN TYR SEQRES 33 A 581 THR SER TRP GLU GLY ASN PRO GLY TYR GLN ASN GLN GLN SEQRES 34 A 581 GLN ILE GLY ARG ALA VAL GLY ASP HIS PHE PHE THR CYS SEQRES 35 A 581 PRO THR ASN GLU TYR ALA GLN ALA LEU ALA GLU ARG GLY SEQRES 36 A 581 ALA SER VAL HIS TYR TYR TYR PHE THR HIS ARG THR SER SEQRES 37 A 581 THR SER LEU TRP GLY GLU TRP MET GLY VAL LEU HIS GLY SEQRES 38 A 581 ASP GLU ILE GLU TYR PHE PHE GLY GLN PRO LEU ASN ASN SEQRES 39 A 581 SER LEU GLN TYR ARG PRO VAL GLU ARG GLU LEU GLY LYS SEQRES 40 A 581 ARG MET LEU SER ALA VAL ILE GLU PHE ALA LYS THR GLY SEQRES 41 A 581 ASN PRO ALA GLN ASP GLY GLU GLU TRP PRO ASN PHE SER SEQRES 42 A 581 LYS GLU ASP PRO VAL TYR TYR ILE PHE SER THR ASP ASP SEQRES 43 A 581 LYS ILE GLU LYS LEU ALA ARG GLY PRO LEU ALA ALA ARG SEQRES 44 A 581 CYS SER PHE TRP ASN ASP TYR LEU PRO LYS VAL ARG SER SEQRES 45 A 581 TRP ALA GLY THR CYS ASP GLY ASP SER HET NAG B 1 14 HET NAG B 2 14 HET MAN B 3 11 HET BMA B 4 11 HET MAN B 5 11 HET CL A 601 1 HET ACT A 602 3 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 2 MAN 2(C6 H12 O6) FORMUL 2 BMA C6 H12 O6 FORMUL 3 CL CL 1- FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 HOH *94(H2 O) HELIX 1 AA1 VAL A 39 ARG A 43 5 5 HELIX 2 AA2 PHE A 77 ILE A 82 1 6 HELIX 3 AA3 LEU A 159 ASN A 163 5 5 HELIX 4 AA4 ALA A 164 ASN A 172 1 9 HELIX 5 AA5 GLY A 183 LEU A 188 1 6 HELIX 6 AA6 LEU A 190 MET A 194 5 5 HELIX 7 AA7 PRO A 195 ALA A 202 5 8 HELIX 8 AA8 ASN A 205 ASN A 221 1 17 HELIX 9 AA9 ALA A 222 PHE A 225 5 4 HELIX 10 AB1 SER A 238 SER A 250 1 13 HELIX 11 AB2 ALA A 269 HIS A 273 5 5 HELIX 12 AB3 THR A 275 CYS A 290 1 16 HELIX 13 AB4 ALA A 302 SER A 310 1 9 HELIX 14 AB5 ASP A 312 GLN A 320 1 9 HELIX 15 AB6 TRP A 321 TYR A 324 5 4 HELIX 16 AB7 ASP A 344 ALA A 352 1 9 HELIX 17 AB8 GLY A 368 PHE A 376 1 9 HELIX 18 AB9 ARG A 390 PHE A 401 1 12 HELIX 19 AC1 THR A 405 TYR A 416 1 12 HELIX 20 AC2 GLY A 424 PHE A 440 1 17 HELIX 21 AC3 PHE A 440 ARG A 454 1 15 HELIX 22 AC4 GLY A 473 GLY A 477 5 5 HELIX 23 AC5 GLU A 483 PHE A 488 1 6 HELIX 24 AC6 GLY A 489 ASN A 493 5 5 HELIX 25 AC7 ARG A 499 GLY A 520 1 22 HELIX 26 AC8 ARG A 553 ASP A 565 1 13 HELIX 27 AC9 ASP A 565 ARG A 571 1 7 SHEET 1 AA1 3 VAL A 6 THR A 9 0 SHEET 2 AA1 3 GLY A 12 ARG A 15 -1 O GLY A 12 N THR A 9 SHEET 3 AA1 3 LEU A 57 ASP A 58 1 O LEU A 57 N ARG A 15 SHEET 1 AA211 ARG A 17 VAL A 21 0 SHEET 2 AA211 ARG A 24 PRO A 33 -1 O VAL A 26 N VAL A 19 SHEET 3 AA211 TYR A 95 PRO A 101 -1 O ALA A 100 N HIS A 27 SHEET 4 AA211 ILE A 174 PHE A 178 -1 O VAL A 175 N TRP A 99 SHEET 5 AA211 LEU A 141 ILE A 147 1 N LEU A 144 O ILE A 174 SHEET 6 AA211 GLY A 227 GLU A 237 1 O ASN A 228 N LEU A 141 SHEET 7 AA211 ARG A 259 GLN A 263 1 O GLN A 263 N GLY A 236 SHEET 8 AA211 ASP A 358 VAL A 364 1 O ASP A 358 N GLY A 260 SHEET 9 AA211 SER A 457 PHE A 463 1 O PHE A 463 N ASN A 363 SHEET 10 AA211 TYR A 539 PHE A 542 1 O TYR A 540 N TYR A 460 SHEET 11 AA211 LEU A 551 ALA A 552 -1 O ALA A 552 N TYR A 539 SSBOND 1 CYS A 66 CYS A 93 1555 1555 2.07 SSBOND 2 CYS A 292 CYS A 307 1555 1555 2.05 SSBOND 3 CYS A 442 CYS A 560 1555 1555 2.01 LINK OG SER A 238 C ACT A 602 1555 1555 1.43 LINK ND2 ASN A 493 C1 NAG B 1 1555 1555 1.43 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.37 LINK O4 NAG B 2 C1 MAN B 3 1555 1555 1.38 LINK O3 MAN B 3 C1 BMA B 4 1555 1555 1.37 LINK O3 BMA B 4 C1 MAN B 5 1555 1555 1.38 CRYST1 94.620 94.620 159.010 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010569 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010569 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006289 0.00000