HEADER IMMUNE SYSTEM 05-FEB-20 6XZU TITLE COMPLEX OF C-TERMINAL DOMAIN OF MURINE COMPLEMENT C3B WITH THE HC3NB3 TITLE 2 NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: NANOBODY HC3NB1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: SINGLE DOMAIN NANOBODY SELECTED FROM LAMA IMMUNIZATION COMPND 6 LIBRARY; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: COMPLEMENT C3; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: HSE-MSF; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: FROM MURINE COMPLEMENT C3B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 3 ORGANISM_TAXID: 9844; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 8 ORGANISM_COMMON: MOUSE; SOURCE 9 ORGANISM_TAXID: 10090; SOURCE 10 GENE: C3; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, COMPLEMENT, NANOBODY, INNATE IMMUNE SYSTEM, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR G.R.ANDERSEN,H.PEDERSEN REVDAT 3 24-JAN-24 6XZU 1 REMARK REVDAT 2 24-FEB-21 6XZU 1 JRNL REVDAT 1 12-AUG-20 6XZU 0 JRNL AUTH H.PEDERSEN,R.K.JENSEN,J.M.B.JENSEN,R.FOX,D.V.PEDERSEN, JRNL AUTH 2 H.G.OLESEN,A.G.HANSEN,D.CHRISTIANSEN,S.M.M.MAZARAKIS, JRNL AUTH 3 N.LOJEK,P.HANSEN,T.A.F.GADEBERG,A.ZARANTONELLO,N.S.LAURSEN, JRNL AUTH 4 T.E.MOLLNES,M.B.JOHNSON,B.STEVENS,S.THIEL,G.R.ANDERSEN JRNL TITL A COMPLEMENT C3-SPECIFIC NANOBODY FOR MODULATION OF THE JRNL TITL 2 ALTERNATIVE CASCADE IDENTIFIES THE C-TERMINAL DOMAIN OF C3B JRNL TITL 3 AS FUNCTIONAL IN C5 CONVERTASE ACTIVITY. JRNL REF J IMMUNOL. V. 205 2287 2020 JRNL REFN ESSN 1550-6606 JRNL PMID 32938727 JRNL DOI 10.4049/JIMMUNOL.2000752 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3689 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 55338 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.030 REMARK 3 FREE R VALUE TEST SET COUNT : 1677 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1900 - 3.4300 1.00 4768 150 0.1448 0.1595 REMARK 3 2 3.4300 - 2.7300 0.99 4574 143 0.1615 0.2206 REMARK 3 3 2.7300 - 2.3800 0.99 4518 144 0.1614 0.2010 REMARK 3 4 2.3800 - 2.1600 0.99 4515 134 0.1562 0.1924 REMARK 3 5 2.1600 - 2.0100 0.99 4489 135 0.1626 0.2329 REMARK 3 6 2.0100 - 1.8900 0.98 4419 141 0.1749 0.1908 REMARK 3 7 1.8900 - 1.8000 0.98 4448 143 0.1771 0.2372 REMARK 3 8 1.8000 - 1.7200 0.98 4424 137 0.1834 0.2265 REMARK 3 9 1.7200 - 1.6500 0.98 4374 146 0.2024 0.2447 REMARK 3 10 1.6500 - 1.5900 0.97 4385 132 0.2359 0.2056 REMARK 3 11 1.5900 - 1.5400 0.97 4394 144 0.3040 0.3318 REMARK 3 12 1.5400 - 1.5000 0.97 4353 128 0.3970 0.4093 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.224 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.329 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.77 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 2158 REMARK 3 ANGLE : 2.092 2915 REMARK 3 CHIRALITY : 0.124 318 REMARK 3 PLANARITY : 0.014 376 REMARK 3 DIHEDRAL : 15.763 797 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 26.9115 2.0217 -10.9014 REMARK 3 T TENSOR REMARK 3 T11: 0.1678 T22: 0.1694 REMARK 3 T33: 0.1742 T12: -0.0253 REMARK 3 T13: 0.0322 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.7594 L22: 1.0365 REMARK 3 L33: 2.0353 L12: -0.3089 REMARK 3 L13: 0.9106 L23: -0.5128 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: 0.0109 S13: 0.0703 REMARK 3 S21: 0.0013 S22: 0.0082 S23: -0.0488 REMARK 3 S31: -0.1645 S32: 0.1492 S33: 0.0317 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6XZU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1292106591. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873130 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55338 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : 0.07987 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2I07 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17.5% PEG 4K, 33 MM NAOAC (PH 4.3), 66 REMARK 280 MM NAOAC (PH 5.3), 0.2 M AMSO4., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.71500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.82000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.12500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.82000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.71500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.12500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.71500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.12500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 60.82000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.12500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.71500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 60.82000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR A 102 OE1 GLU B 1654 1.53 REMARK 500 O HOH B 1777 H2 HOH B 1791 1.54 REMARK 500 O HOH A 318 H2 HOH A 340 1.56 REMARK 500 OD1 ASP B 1625 H2 HOH B 1703 1.56 REMARK 500 OD1 ASP B 1542 H1 HOH B 1702 1.57 REMARK 500 OD2 ASP B 1574 HH TYR B 1620 1.58 REMARK 500 O HOH A 201 H2 HOH A 205 1.58 REMARK 500 OE2 GLU A 47 H1 HOH A 201 1.58 REMARK 500 OE2 GLU B 1636 H2 HOH B 1704 1.58 REMARK 500 O CYS B 1661 H1 HOH B 1701 1.59 REMARK 500 O HOH B 1814 H2 HOH B 1866 1.59 REMARK 500 OD2 ASP B 1534 H2 HOH B 1708 1.60 REMARK 500 OD1 ASN B 1517 H2 HOH B 1705 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU B 1575 H2 HOH B 1744 7555 1.43 REMARK 500 OE2 GLU B 1575 H2 HOH B 1701 7555 1.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 68 CB - CG - CD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 PHE A 68 CB - CG - CD1 ANGL. DEV. = 4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 2 143.40 -36.64 REMARK 500 PHE A 30 -58.02 68.11 REMARK 500 THR A 77 50.12 39.84 REMARK 500 ALA A 92 166.96 178.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 46 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 339 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 340 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH A 341 DISTANCE = 6.63 ANGSTROMS DBREF 6XZU A 1 127 PDB 6XZU 6XZU 1 127 DBREF 6XZU B 1517 1663 UNP P01027 CO3_MOUSE 1517 1663 SEQADV 6XZU ALA B 1516 UNP P01027 EXPRESSION TAG SEQRES 1 A 127 MET GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL SEQRES 2 A 127 GLN ALA GLY GLY SER LEU ARG LEU SER CYS VAL VAL SER SEQRES 3 A 127 GLY SER THR PHE SER ASP TYR ALA MET GLY TRP TYR ARG SEQRES 4 A 127 GLN ALA ALA GLY GLU GLN ARG GLU LEU VAL ALA ALA ILE SEQRES 5 A 127 TYR SER THR GLY ARG THR ASN TYR ILE ASP SER VAL LYS SEQRES 6 A 127 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS THR THR SEQRES 7 A 127 VAL TYR LEU GLN MET ASN SER LEU LYS PRO GLU ASP THR SEQRES 8 A 127 ALA VAL TYR TYR CYS ASN LEU LEU GLY ALA THR THR MET SEQRES 9 A 127 ILE ASN THR LYS TRP GLY GLN GLY THR GLN VAL THR VAL SEQRES 10 A 127 SER SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 148 ALA ASN CYS PHE MET GLN GLN SER GLN GLU LYS ILE ASN SEQRES 2 B 148 LEU ASN VAL ARG LEU ASP LYS ALA CYS GLU PRO GLY VAL SEQRES 3 B 148 ASP TYR VAL TYR LYS THR GLU LEU THR ASN ILE GLU LEU SEQRES 4 B 148 LEU ASP ASP PHE ASP GLU TYR THR MET THR ILE GLN GLN SEQRES 5 B 148 VAL ILE LYS SER GLY SER ASP GLU VAL GLN ALA GLY GLN SEQRES 6 B 148 GLN ARG LYS PHE ILE SER HIS ILE LYS CYS ARG ASN ALA SEQRES 7 B 148 LEU LYS LEU GLN LYS GLY LYS LYS TYR LEU MET TRP GLY SEQRES 8 B 148 LEU SER SER ASP LEU TRP GLY GLU LYS PRO ASN THR SER SEQRES 9 B 148 TYR ILE ILE GLY LYS ASP THR TRP VAL GLU HIS TRP PRO SEQRES 10 B 148 GLU ALA GLU GLU CYS GLN ASP GLN LYS TYR GLN LYS GLN SEQRES 11 B 148 CYS GLU GLU LEU GLY ALA PHE THR GLU SER MET VAL VAL SEQRES 12 B 148 TYR GLY CYS PRO ASN FORMUL 3 HOH *311(H2 O) HELIX 1 AA1 ASP A 62 LYS A 65 5 4 HELIX 2 AA2 ASN A 74 LYS A 76 5 3 HELIX 3 AA3 LYS A 87 THR A 91 5 5 HELIX 4 AA4 PHE B 1519 GLN B 1524 5 6 HELIX 5 AA5 ASN B 1528 ALA B 1536 1 9 HELIX 6 AA6 HIS B 1587 LYS B 1589 5 3 HELIX 7 AA7 CYS B 1590 LYS B 1595 1 6 HELIX 8 AA8 GLU B 1633 GLN B 1638 1 6 HELIX 9 AA9 TYR B 1642 GLY B 1660 1 19 SHEET 1 AA1 4 GLN A 4 SER A 8 0 SHEET 2 AA1 4 LEU A 19 SER A 26 -1 O SER A 26 N GLN A 4 SHEET 3 AA1 4 THR A 78 MET A 83 -1 O MET A 83 N LEU A 19 SHEET 4 AA1 4 PHE A 68 ASP A 73 -1 N THR A 69 O GLN A 82 SHEET 1 AA2 6 GLY A 11 GLN A 14 0 SHEET 2 AA2 6 THR A 113 SER A 118 1 O THR A 116 N GLY A 11 SHEET 3 AA2 6 ALA A 92 LEU A 98 -1 N TYR A 94 O THR A 113 SHEET 4 AA2 6 MET A 35 GLN A 40 -1 N TYR A 38 O TYR A 95 SHEET 5 AA2 6 GLU A 47 ILE A 52 -1 O VAL A 49 N TRP A 37 SHEET 6 AA2 6 THR A 58 TYR A 60 -1 O ASN A 59 N ALA A 51 SHEET 1 AA3 7 LEU B1611 TRP B1612 0 SHEET 2 AA3 7 SER B1619 ILE B1621 -1 O SER B1619 N TRP B1612 SHEET 3 AA3 7 GLN B1581 SER B1586 1 N ILE B1585 O TYR B1620 SHEET 4 AA3 7 ASP B1559 LYS B1570 -1 N TYR B1561 O PHE B1584 SHEET 5 AA3 7 VAL B1541 LEU B1554 -1 N GLU B1553 O GLU B1560 SHEET 6 AA3 7 LYS B1601 LEU B1607 -1 O MET B1604 N TYR B1545 SHEET 7 AA3 7 TRP B1627 TRP B1631 -1 O TRP B1631 N LYS B1601 SSBOND 1 CYS B 1518 CYS B 1590 1555 1555 2.16 SSBOND 2 CYS B 1537 CYS B 1661 1555 1555 2.09 SSBOND 3 CYS B 1637 CYS B 1646 1555 1555 2.13 CISPEP 1 LYS B 1615 PRO B 1616 0 6.52 CRYST1 73.430 78.250 121.640 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013618 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012780 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008221 0.00000