data_6Y3G # _entry.id 6Y3G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6Y3G pdb_00006y3g 10.2210/pdb6y3g/pdb WWPDB D_1292106798 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-12-30 2 'Structure model' 1 1 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' chem_comp_atom 3 2 'Structure model' chem_comp_bond 4 2 'Structure model' database_2 5 2 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.pdbx_synonyms' 2 2 'Structure model' '_database_2.pdbx_DOI' 3 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6Y3G _pdbx_database_status.recvd_initial_deposition_date 2020-02-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bourgeois, G.' 1 0000-0001-7408-4778 'Mechulam, Y.' 2 0000-0003-3586-3554 'Schmitt, E.' 3 0000-0001-7532-338X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Rna _citation.journal_id_ASTM RNARFU _citation.journal_id_CSD 2122 _citation.journal_id_ISSN 1469-9001 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 26 _citation.language ? _citation.page_first 1589 _citation.page_last 1602 _citation.title 'Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1261/rna.075184.120 _citation.pdbx_database_id_PubMed 32680846 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bourgeois, G.' 1 0000-0001-7408-4778 primary 'Seguin, J.' 2 ? primary 'Babin, M.' 3 ? primary 'Gondry, M.' 4 0000-0003-0398-3404 primary 'Mechulam, Y.' 5 0000-0003-3586-3554 primary 'Schmitt, E.' 6 0000-0001-7532-338X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA (75-MER)' 24620.766 1 ? ? ? ? 2 non-polymer syn GUANIDINE 59.070 4 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 7 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GCCCGGA(4SU)AGCUCAG(H2U)CGG(H2U)AGAGCAGGGGA(PSU)UGAAAA(PSU)CCCCGUG(3AU)CCUUGG (5MU)(PSU)CGAUUCCGAGUCCGGGCACCA ; _entity_poly.pdbx_seq_one_letter_code_can GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGXCCUUGGUUCGAUUCCGAGUCCGGGCACCA _entity_poly.pdbx_strand_id F _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GUANIDINE GAI 3 'CALCIUM ION' CA 4 GLYCEROL GOL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 C n 1 4 C n 1 5 G n 1 6 G n 1 7 A n 1 8 4SU n 1 9 A n 1 10 G n 1 11 C n 1 12 U n 1 13 C n 1 14 A n 1 15 G n 1 16 H2U n 1 17 C n 1 18 G n 1 19 G n 1 20 H2U n 1 21 A n 1 22 G n 1 23 A n 1 24 G n 1 25 C n 1 26 A n 1 27 G n 1 28 G n 1 29 G n 1 30 G n 1 31 A n 1 32 PSU n 1 33 U n 1 34 G n 1 35 A n 1 36 A n 1 37 A n 1 38 A n 1 39 PSU n 1 40 C n 1 41 C n 1 42 C n 1 43 C n 1 44 G n 1 45 U n 1 46 G n 1 47 3AU n 1 48 C n 1 49 C n 1 50 U n 1 51 U n 1 52 G n 1 53 G n 1 54 5MU n 1 55 PSU n 1 56 C n 1 57 G n 1 58 A n 1 59 U n 1 60 U n 1 61 C n 1 62 C n 1 63 G n 1 64 A n 1 65 G n 1 66 U n 1 67 C n 1 68 C n 1 69 G n 1 70 G n 1 71 G n 1 72 C n 1 73 A n 1 74 C n 1 75 C n 1 76 A n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 76 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3AU 'RNA linking' n ;3-[(3S)-3-amino-3-carboxypropyl]uridine 5'-(dihydrogen phosphate) ; ? 'C13 H20 N3 O11 P' 425.285 4SU 'RNA linking' n "4-THIOURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O8 P S' 340.247 5MU 'RNA linking' n ;5-METHYLURIDINE 5'-MONOPHOSPHATE ; ? 'C10 H15 N2 O9 P' 338.208 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GAI non-polymer . GUANIDINE ? 'C H5 N3' 59.070 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 H2U 'RNA linking' n "5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE" ? 'C9 H15 N2 O9 P' 326.197 HOH non-polymer . WATER ? 'H2 O' 18.015 PSU 'RNA linking' n "PSEUDOURIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G F . n A 1 2 C 2 2 2 C C F . n A 1 3 C 3 3 3 C C F . n A 1 4 C 4 4 4 C C F . n A 1 5 G 5 5 5 G G F . n A 1 6 G 6 6 6 G G F . n A 1 7 A 7 7 7 A A F . n A 1 8 4SU 8 8 8 4SU 4SU F . n A 1 9 A 9 9 9 A A F . n A 1 10 G 10 10 10 G G F . n A 1 11 C 11 11 11 C C F . n A 1 12 U 12 12 12 U U F . n A 1 13 C 13 13 13 C C F . n A 1 14 A 14 14 14 A A F . n A 1 15 G 15 15 15 G G F . n A 1 16 H2U 16 16 16 H2U H2U F . n A 1 17 C 17 17 17 C C F . n A 1 18 G 18 18 18 G G F . n A 1 19 G 19 19 19 G G F . n A 1 20 H2U 20 20 20 H2U H2U F . n A 1 21 A 21 21 21 A A F . n A 1 22 G 22 22 22 G G F . n A 1 23 A 23 23 23 A A F . n A 1 24 G 24 24 24 G G F . n A 1 25 C 25 25 25 C C F . n A 1 26 A 26 26 26 A A F . n A 1 27 G 27 27 27 G G F . n A 1 28 G 28 28 28 G G F . n A 1 29 G 29 29 29 G G F . n A 1 30 G 30 30 30 G G F . n A 1 31 A 31 31 31 A A F . n A 1 32 PSU 32 32 32 PSU PSU F . n A 1 33 U 33 33 33 U U F . n A 1 34 G 34 34 34 G G F . n A 1 35 A 35 35 35 A A F . n A 1 36 A 36 36 36 A A F . n A 1 37 A 37 37 37 A A F . n A 1 38 A 38 38 38 A A F . n A 1 39 PSU 39 39 39 PSU PSU F . n A 1 40 C 40 40 40 C C F . n A 1 41 C 41 41 41 C C F . n A 1 42 C 42 42 42 C C F . n A 1 43 C 43 43 43 C C F . n A 1 44 G 44 44 44 G G F . n A 1 45 U 45 45 45 U U F . n A 1 46 G 46 46 46 G G F . n A 1 47 3AU 47 47 47 3AU ACP F . n A 1 48 C 48 48 48 C C F . n A 1 49 C 49 49 49 C C F . n A 1 50 U 50 50 50 U U F . n A 1 51 U 51 51 51 U U F . n A 1 52 G 52 52 52 G G F . n A 1 53 G 53 53 53 G G F . n A 1 54 5MU 54 54 54 5MU 5MU F . n A 1 55 PSU 55 55 55 PSU PSU F . n A 1 56 C 56 56 56 C C F . n A 1 57 G 57 57 57 G G F . n A 1 58 A 58 58 58 A A F . n A 1 59 U 59 59 59 U U F . n A 1 60 U 60 60 60 U U F . n A 1 61 C 61 61 61 C C F . n A 1 62 C 62 62 62 C C F . n A 1 63 G 63 63 63 G G F . n A 1 64 A 64 64 64 A A F . n A 1 65 G 65 65 65 G G F . n A 1 66 U 66 66 66 U U F . n A 1 67 C 67 67 67 C C F . n A 1 68 C 68 68 68 C C F . n A 1 69 G 69 69 69 G G F . n A 1 70 G 70 70 70 G G F . n A 1 71 G 71 71 71 G G F . n A 1 72 C 72 72 72 C C F . n A 1 73 A 73 73 73 A A F . n A 1 74 C 74 74 74 C C F . n A 1 75 C 75 75 75 C C F . n A 1 76 A 76 76 ? ? ? F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GAI 1 101 125 GAI GAI F . C 2 GAI 1 102 126 GAI GAI F . D 2 GAI 1 103 129 GAI GAI F . E 2 GAI 1 104 130 GAI GAI F . F 3 CA 1 105 1 CA CA F . G 3 CA 1 106 2 CA CA F . H 3 CA 1 107 4 CA CA F . I 3 CA 1 108 6 CA CA F . J 3 CA 1 109 7 CA CA F . K 3 CA 1 110 8 CA CA F . L 3 CA 1 111 11 CA CA F . M 4 GOL 1 112 1 GOL GOL F . N 5 HOH 1 201 18 HOH HOH F . N 5 HOH 2 202 15 HOH HOH F . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 1.17.1_3660 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6Y3G _cell.details ? _cell.formula_units_Z ? _cell.length_a 109.618 _cell.length_a_esd ? _cell.length_b 109.618 _cell.length_b_esd ? _cell.length_c 138.518 _cell.length_c_esd ? _cell.volume 1441453.351 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y3G _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall 'P 64 2 (x,y,z+1/6)' _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Y3G _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.95 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 75.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '12.4% PEG8000, 0.2M AcCa, 0.1M Hepes pH 7, 0.1M L-Pro' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 278 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-09-16 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97857 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 2' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6Y3G _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.1 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9432 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.3 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1464 _reflns_shell.percent_possible_all 98.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.68 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6Y3G _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.10 _refine.ls_d_res_low 42.98 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9420 _refine.ls_number_reflns_R_free 470 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.76 _refine.ls_percent_reflns_R_free 4.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2163 _refine.ls_R_factor_R_free 0.2361 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2153 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4YCO _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.5042 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3628 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.10 _refine_hist.d_res_low 42.98 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 1640 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1609 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0035 ? 1813 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8543 ? 2816 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0391 ? 368 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0055 ? 123 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 20.7444 ? 921 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.10 3.55 . . 152 2893 99.41 . . . 0.2871 . 0.2415 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.55 4.47 . . 151 2936 100.00 . . . 0.2864 . 0.2269 . . . . . . . . . . . # _struct.entry_id 6Y3G _struct.title 'Crystal structure of phenylalanine tRNA from Escherichia coli' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Y3G _struct_keywords.text 'Transfer RNA with modifications, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6Y3G _struct_ref.pdbx_db_accession 6Y3G _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6Y3G _struct_ref_seq.pdbx_strand_id F _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 76 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6Y3G _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 76 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 76 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4800 ? 1 MORE -74 ? 1 'SSA (A^2)' 12800 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A A 7 "O3'" ? ? ? 1_555 A 4SU 8 P ? ? F A 7 F 4SU 8 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale2 covale both ? A 4SU 8 "O3'" ? ? ? 1_555 A A 9 P ? ? F 4SU 8 F A 9 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale3 covale both ? A G 15 "O3'" ? ? ? 1_555 A H2U 16 P ? ? F G 15 F H2U 16 1_555 ? ? ? ? ? ? ? 1.596 ? ? covale4 covale both ? A H2U 16 "O3'" ? ? ? 1_555 A C 17 P ? ? F H2U 16 F C 17 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale5 covale both ? A G 19 "O3'" ? ? ? 1_555 A H2U 20 P ? ? F G 19 F H2U 20 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale6 covale both ? A H2U 20 "O3'" ? ? ? 1_555 A A 21 P ? ? F H2U 20 F A 21 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale7 covale both ? A A 31 "O3'" ? ? ? 1_555 A PSU 32 P ? ? F A 31 F PSU 32 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale8 covale both ? A PSU 32 "O3'" ? ? ? 1_555 A U 33 P ? ? F PSU 32 F U 33 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale9 covale both ? A A 38 "O3'" ? ? ? 1_555 A PSU 39 P ? ? F A 38 F PSU 39 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale10 covale both ? A PSU 39 "O3'" ? ? ? 1_555 A C 40 P ? ? F PSU 39 F C 40 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale11 covale one ? A G 46 "O3'" ? ? ? 1_555 A 3AU 47 P ? ? F G 46 F 3AU 47 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale12 covale one ? A 3AU 47 "O3'" ? ? ? 1_555 A C 48 P ? ? F 3AU 47 F C 48 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale13 covale both ? A G 53 "O3'" ? ? ? 1_555 A 5MU 54 P ? ? F G 53 F 5MU 54 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale14 covale both ? A 5MU 54 "O3'" ? ? ? 1_555 A PSU 55 P ? ? F 5MU 54 F PSU 55 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale15 covale both ? A PSU 55 "O3'" ? ? ? 1_555 A C 56 P ? ? F PSU 55 F C 56 1_555 ? ? ? ? ? ? ? 1.609 ? ? metalc1 metalc ? ? A A 9 OP1 ? ? ? 1_555 G CA . CA ? ? F A 9 F CA 106 1_555 ? ? ? ? ? ? ? 2.560 ? ? metalc2 metalc ? ? A H2U 20 "O3'" ? ? ? 1_555 H CA . CA ? ? F H2U 20 F CA 107 1_555 ? ? ? ? ? ? ? 2.835 ? ? metalc3 metalc ? ? A A 21 OP2 ? ? ? 1_555 H CA . CA ? ? F A 21 F CA 107 1_555 ? ? ? ? ? ? ? 2.353 ? ? metalc4 metalc ? ? A PSU 32 O2 ? ? ? 1_555 K CA . CA ? ? F PSU 32 F CA 110 1_555 ? ? ? ? ? ? ? 3.151 ? ? metalc5 metalc ? ? A 3AU 47 OP2 ? ? ? 1_555 F CA . CA ? ? F 3AU 47 F CA 105 1_555 ? ? ? ? ? ? ? 2.758 ? ? metalc6 metalc ? ? A C 48 OP1 ? ? ? 1_555 F CA . CA ? ? F C 48 F CA 105 1_555 ? ? ? ? ? ? ? 2.487 ? ? metalc7 metalc ? ? A U 50 OP1 ? ? ? 1_555 F CA . CA ? ? F U 50 F CA 105 1_555 ? ? ? ? ? ? ? 2.375 ? ? metalc8 metalc ? ? A U 59 OP1 ? ? ? 1_555 H CA . CA ? ? F U 59 F CA 107 1_555 ? ? ? ? ? ? ? 2.310 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 72 N3 ? ? F G 1 F C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 72 O2 ? ? F G 1 F C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 72 N4 ? ? F G 1 F C 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 71 N1 ? ? F C 2 F G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 71 O6 ? ? F C 2 F G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 71 N2 ? ? F C 2 F G 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 70 N1 ? ? F C 3 F G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 70 O6 ? ? F C 3 F G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 70 N2 ? ? F C 3 F G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 69 N1 ? ? F C 4 F G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 69 O6 ? ? F C 4 F G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 69 N2 ? ? F C 4 F G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 68 N3 ? ? F G 5 F C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 68 O2 ? ? F G 5 F C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 68 N4 ? ? F G 5 F C 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 67 N3 ? ? F G 6 F C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 67 O2 ? ? F G 6 F C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 67 N4 ? ? F G 6 F C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 66 N3 ? ? F A 7 F U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 66 O4 ? ? F A 7 F U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A 4SU 8 N3 ? ? ? 1_555 A A 14 N7 ? ? F 4SU 8 F A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog22 hydrog ? ? A 4SU 8 O2 ? ? ? 1_555 A A 14 N6 ? ? F 4SU 8 F A 14 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog23 hydrog ? ? A A 9 N6 ? ? ? 1_555 A A 23 N7 ? ? F A 9 F A 23 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog24 hydrog ? ? A A 9 N7 ? ? ? 1_555 A A 23 N6 ? ? F A 9 F A 23 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog25 hydrog ? ? A G 10 N1 ? ? ? 1_555 A C 25 N3 ? ? F G 10 F C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 10 N2 ? ? ? 1_555 A C 25 O2 ? ? F G 10 F C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 25 N4 ? ? F G 10 F C 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 10 N7 ? ? ? 1_555 A G 44 N2 ? ? F G 10 F G 44 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A G 10 O6 ? ? ? 1_555 A G 44 N1 ? ? F G 10 F G 44 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 24 N1 ? ? F C 11 F G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 24 O6 ? ? F C 11 F G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 24 N2 ? ? F C 11 F G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 23 N1 ? ? F U 12 F A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 23 N6 ? ? F U 12 F A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 22 N1 ? ? F C 13 F G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 22 O6 ? ? F C 13 F G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 22 N2 ? ? F C 13 F G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 48 O2 ? ? F G 15 F C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog39 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 48 N3 ? ? F G 15 F C 48 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog40 hydrog ? ? A G 18 N1 ? ? ? 1_555 A PSU 55 O4 ? ? F G 18 F PSU 55 1_555 ? ? ? ? ? ? 'G-PSU MISPAIR' ? ? ? hydrog41 hydrog ? ? A G 19 N1 ? ? ? 1_555 A C 56 N3 ? ? F G 19 F C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 19 N2 ? ? ? 1_555 A C 56 O2 ? ? F G 19 F C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 19 O6 ? ? ? 1_555 A C 56 N4 ? ? F G 19 F C 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 22 N7 ? ? ? 1_555 A G 46 N1 ? ? F G 22 F G 46 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog45 hydrog ? ? A G 22 O6 ? ? ? 1_555 A G 46 N2 ? ? F G 22 F G 46 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog46 hydrog ? ? A C 25 N4 ? ? ? 1_555 A G 44 O6 ? ? F C 25 F G 44 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog47 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 43 N3 ? ? F G 27 F C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 43 O2 ? ? F G 27 F C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 43 N4 ? ? F G 27 F C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 28 N1 ? ? ? 1_555 A C 42 N3 ? ? F G 28 F C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 28 N2 ? ? ? 1_555 A C 42 O2 ? ? F G 28 F C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 28 O6 ? ? ? 1_555 A C 42 N4 ? ? F G 28 F C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 29 N1 ? ? ? 1_555 A C 41 N3 ? ? F G 29 F C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 29 N2 ? ? ? 1_555 A C 41 O2 ? ? F G 29 F C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 29 O6 ? ? ? 1_555 A C 41 N4 ? ? F G 29 F C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 40 N3 ? ? F G 30 F C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 40 O2 ? ? F G 30 F C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 40 N4 ? ? F G 30 F C 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A A 31 N1 ? ? ? 1_555 A PSU 39 N3 ? ? F A 31 F PSU 39 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog60 hydrog ? ? A A 31 N6 ? ? ? 1_555 A PSU 39 O2 ? ? F A 31 F PSU 39 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog61 hydrog ? ? A PSU 32 O4 ? ? ? 1_555 A A 38 N6 ? ? F PSU 32 F A 38 1_555 ? ? ? ? ? ? 'PSU-A MISPAIR' ? ? ? hydrog62 hydrog ? ? A C 49 N3 ? ? ? 1_555 A G 65 N1 ? ? F C 49 F G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 49 N4 ? ? ? 1_555 A G 65 O6 ? ? F C 49 F G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 49 O2 ? ? ? 1_555 A G 65 N2 ? ? F C 49 F G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A U 50 N3 ? ? ? 1_555 A A 64 N1 ? ? F U 50 F A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A U 50 O4 ? ? ? 1_555 A A 64 N6 ? ? F U 50 F A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A U 51 N3 ? ? ? 1_555 A G 63 O6 ? ? F U 51 F G 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog68 hydrog ? ? A U 51 O2 ? ? ? 1_555 A G 63 N1 ? ? F U 51 F G 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog69 hydrog ? ? A G 52 N1 ? ? ? 1_555 A C 62 N3 ? ? F G 52 F C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 52 N2 ? ? ? 1_555 A C 62 O2 ? ? F G 52 F C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 52 O6 ? ? ? 1_555 A C 62 N4 ? ? F G 52 F C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 53 N1 ? ? ? 1_555 A C 61 N3 ? ? F G 53 F C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 53 N2 ? ? ? 1_555 A C 61 O2 ? ? F G 53 F C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 53 O6 ? ? ? 1_555 A C 61 N4 ? ? F G 53 F C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A 5MU 54 N3 ? ? ? 1_555 A A 58 N7 ? ? F 5MU 54 F A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog76 hydrog ? ? A 5MU 54 O2 ? ? ? 1_555 A A 58 N6 ? ? F 5MU 54 F A 58 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O3'" ? A H2U 20 ? F H2U 20 ? 1_555 CA ? H CA . ? F CA 107 ? 1_555 OP2 ? A A 21 ? F A 21 ? 1_555 56.6 ? 2 "O3'" ? A H2U 20 ? F H2U 20 ? 1_555 CA ? H CA . ? F CA 107 ? 1_555 OP1 ? A U 59 ? F U 59 ? 1_555 132.2 ? 3 OP2 ? A A 21 ? F A 21 ? 1_555 CA ? H CA . ? F CA 107 ? 1_555 OP1 ? A U 59 ? F U 59 ? 1_555 76.0 ? 4 OP2 ? A 3AU 47 ? F 3AU 47 ? 1_555 CA ? F CA . ? F CA 105 ? 1_555 OP1 ? A C 48 ? F C 48 ? 1_555 78.8 ? 5 OP2 ? A 3AU 47 ? F 3AU 47 ? 1_555 CA ? F CA . ? F CA 105 ? 1_555 OP1 ? A U 50 ? F U 50 ? 1_555 74.6 ? 6 OP1 ? A C 48 ? F C 48 ? 1_555 CA ? F CA . ? F CA 105 ? 1_555 OP1 ? A U 50 ? F U 50 ? 1_555 76.9 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software F GAI 101 ? 2 'binding site for residue GAI F 101' AC2 Software F GAI 102 ? 1 'binding site for residue GAI F 102' AC3 Software F GAI 103 ? 3 'binding site for residue GAI F 103' AC4 Software F GAI 104 ? 3 'binding site for residue GAI F 104' AC5 Software F CA 105 ? 3 'binding site for residue CA F 105' AC6 Software F CA 106 ? 2 'binding site for residue CA F 106' AC7 Software F CA 107 ? 3 'binding site for residue CA F 107' AC8 Software F CA 110 ? 2 'binding site for residue CA F 110' AC9 Software F CA 111 ? 1 'binding site for residue CA F 111' AD1 Software F GOL 112 ? 2 'binding site for residue GOL F 112' AD2 Software F 5MU 54 ? 6 'binding site for residues 5MU F 54 and PSU F 55' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 C A 56 ? C F 56 . ? 1_555 ? 2 AC1 2 G A 57 ? G F 57 . ? 1_555 ? 3 AC2 1 G A 53 ? G F 53 . ? 1_555 ? 4 AC3 3 U A 50 ? U F 50 . ? 1_555 ? 5 AC3 3 U A 51 ? U F 51 . ? 1_555 ? 6 AC3 3 U A 60 ? U F 60 . ? 1_555 ? 7 AC4 3 A A 26 ? A F 26 . ? 1_555 ? 8 AC4 3 G A 27 ? G F 27 . ? 1_555 ? 9 AC4 3 G A 28 ? G F 28 . ? 1_555 ? 10 AC5 3 3AU A 47 ? 3AU F 47 . ? 1_555 ? 11 AC5 3 C A 48 ? C F 48 . ? 1_555 ? 12 AC5 3 U A 50 ? U F 50 . ? 1_555 ? 13 AC6 2 4SU A 8 ? 4SU F 8 . ? 1_555 ? 14 AC6 2 A A 9 ? A F 9 . ? 1_555 ? 15 AC7 3 H2U A 20 ? H2U F 20 . ? 1_555 ? 16 AC7 3 A A 21 ? A F 21 . ? 1_555 ? 17 AC7 3 U A 59 ? U F 59 . ? 1_555 ? 18 AC8 2 PSU A 32 ? PSU F 32 . ? 1_555 ? 19 AC8 2 GOL M . ? GOL F 112 . ? 1_555 ? 20 AC9 1 G A 6 ? G F 6 . ? 1_555 ? 21 AD1 2 G A 30 ? G F 30 . ? 1_555 ? 22 AD1 2 CA K . ? CA F 110 . ? 1_555 ? 23 AD2 6 G A 18 ? G F 18 . ? 1_555 ? 24 AD2 6 G A 34 ? G F 34 . ? 6_554 ? 25 AD2 6 G A 53 ? G F 53 . ? 1_555 ? 26 AD2 6 C A 56 ? C F 56 . ? 1_555 ? 27 AD2 6 G A 57 ? G F 57 . ? 1_555 ? 28 AD2 6 A A 58 ? A F 58 . ? 1_555 ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 F _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 F _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.481 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.126 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C2 _pdbx_validate_rmsd_angle.auth_asym_id_1 F _pdbx_validate_rmsd_angle.auth_comp_id_1 C _pdbx_validate_rmsd_angle.auth_seq_id_1 3 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N1 _pdbx_validate_rmsd_angle.auth_asym_id_2 F _pdbx_validate_rmsd_angle.auth_comp_id_2 C _pdbx_validate_rmsd_angle.auth_seq_id_2 3 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_3 F _pdbx_validate_rmsd_angle.auth_comp_id_3 C _pdbx_validate_rmsd_angle.auth_seq_id_3 3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.66 _pdbx_validate_rmsd_angle.angle_target_value 118.80 _pdbx_validate_rmsd_angle.angle_deviation 6.86 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x-y,x,z+2/3 3 y,-x+y,z+1/3 4 -y,x-y,z+1/3 5 -x+y,-x,z+2/3 6 x-y,-y,-z 7 -x,-x+y,-z+2/3 8 -x,-y,z 9 y,x,-z+1/3 10 -y,-x,-z+1/3 11 -x+y,y,-z 12 x,x-y,-z+2/3 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -18.976895582 _pdbx_refine_tls.origin_y -39.6366701535 _pdbx_refine_tls.origin_z -7.70185779636 _pdbx_refine_tls.T[1][1] 0.653409213463 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.050592865553 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0253364587083 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 1.16141788691 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0486326213968 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.852577463238 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 3.63371434084 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -1.42839770114 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -1.72822940764 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 3.71327011844 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 1.14285002437 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 3.77333509331 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0459832748301 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.543518186487 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.379569422295 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.334087333319 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0219223194665 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.252067776587 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.658890007744 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.257954723465 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0203208654306 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # _pdbx_entry_details.entry_id 6Y3G _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id F _pdbx_unobs_or_zero_occ_residues.auth_comp_id A _pdbx_unobs_or_zero_occ_residues.auth_seq_id 76 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id A _pdbx_unobs_or_zero_occ_residues.label_seq_id 76 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3AU P P N N 1 3AU N1 N N N 2 3AU C2 C N N 3 3AU O2 O N N 4 3AU N3 N N N 5 3AU C4 C N N 6 3AU O4 O N N 7 3AU C5 C N N 8 3AU C6 C N N 9 3AU "C1'" C N R 10 3AU C10 C N N 11 3AU C11 C N N 12 3AU C12 C N S 13 3AU C13 C N N 14 3AU "C2'" C N R 15 3AU "O2'" O N N 16 3AU "C3'" C N S 17 3AU "O3'" O N N 18 3AU O30 O N N 19 3AU O31 O N N 20 3AU "C4'" C N R 21 3AU "O4'" O N N 22 3AU N40 N N N 23 3AU "C5'" C N N 24 3AU "O5'" O N N 25 3AU OP1 O N N 26 3AU OP2 O N N 27 3AU H5 H N N 28 3AU H6 H N N 29 3AU "H1'" H N N 30 3AU H10 H N N 31 3AU H10A H N N 32 3AU H11 H N N 33 3AU H11A H N N 34 3AU H12 H N N 35 3AU "H2'" H N N 36 3AU "HO2'" H N N 37 3AU "H3'" H N N 38 3AU "HO3'" H N N 39 3AU "H4'" H N N 40 3AU HN40 H N N 41 3AU HN4A H N N 42 3AU "H5'" H N N 43 3AU "H5'A" H N N 44 3AU O11 O N N 45 3AU H18 H N N 46 3AU H19 H N N 47 3AU H20 H N N 48 4SU N1 N N N 49 4SU C2 C N N 50 4SU N3 N N N 51 4SU C4 C N N 52 4SU C5 C N N 53 4SU C6 C N N 54 4SU O2 O N N 55 4SU S4 S N N 56 4SU "C1'" C N R 57 4SU "C2'" C N R 58 4SU "O2'" O N N 59 4SU "C3'" C N S 60 4SU "C4'" C N R 61 4SU "O3'" O N N 62 4SU "O4'" O N N 63 4SU "C5'" C N N 64 4SU "O5'" O N N 65 4SU P P N N 66 4SU OP1 O N N 67 4SU OP2 O N N 68 4SU OP3 O N N 69 4SU HN3 H N N 70 4SU H5 H N N 71 4SU H6 H N N 72 4SU "H1'" H N N 73 4SU "H2'" H N N 74 4SU "HO2'" H N N 75 4SU "H3'" H N N 76 4SU "H4'" H N N 77 4SU "HO3'" H N N 78 4SU "H5'" H N N 79 4SU "H5''" H N N 80 4SU HOP2 H N N 81 4SU HOP3 H N N 82 5MU N1 N N N 83 5MU C2 C N N 84 5MU N3 N N N 85 5MU C4 C N N 86 5MU C5 C N N 87 5MU C5M C N N 88 5MU C6 C N N 89 5MU O2 O N N 90 5MU O4 O N N 91 5MU "C1'" C N R 92 5MU "C2'" C N R 93 5MU "O2'" O N N 94 5MU "C3'" C N S 95 5MU "C4'" C N R 96 5MU "O3'" O N N 97 5MU "O4'" O N N 98 5MU "C5'" C N N 99 5MU "O5'" O N N 100 5MU P P N N 101 5MU OP1 O N N 102 5MU OP2 O N N 103 5MU OP3 O N N 104 5MU HN3 H N N 105 5MU H71 H N N 106 5MU H72 H N N 107 5MU H73 H N N 108 5MU H6 H N N 109 5MU "H1'" H N N 110 5MU "H2'" H N N 111 5MU "HO2'" H N N 112 5MU "H3'" H N N 113 5MU "H4'" H N N 114 5MU "HO3'" H N N 115 5MU "H5'" H N N 116 5MU "H5''" H N N 117 5MU HOP2 H N N 118 5MU HOP3 H N N 119 A OP3 O N N 120 A P P N N 121 A OP1 O N N 122 A OP2 O N N 123 A "O5'" O N N 124 A "C5'" C N N 125 A "C4'" C N R 126 A "O4'" O N N 127 A "C3'" C N S 128 A "O3'" O N N 129 A "C2'" C N R 130 A "O2'" O N N 131 A "C1'" C N R 132 A N9 N Y N 133 A C8 C Y N 134 A N7 N Y N 135 A C5 C Y N 136 A C6 C Y N 137 A N6 N N N 138 A N1 N Y N 139 A C2 C Y N 140 A N3 N Y N 141 A C4 C Y N 142 A HOP3 H N N 143 A HOP2 H N N 144 A "H5'" H N N 145 A "H5''" H N N 146 A "H4'" H N N 147 A "H3'" H N N 148 A "HO3'" H N N 149 A "H2'" H N N 150 A "HO2'" H N N 151 A "H1'" H N N 152 A H8 H N N 153 A H61 H N N 154 A H62 H N N 155 A H2 H N N 156 C OP3 O N N 157 C P P N N 158 C OP1 O N N 159 C OP2 O N N 160 C "O5'" O N N 161 C "C5'" C N N 162 C "C4'" C N R 163 C "O4'" O N N 164 C "C3'" C N S 165 C "O3'" O N N 166 C "C2'" C N R 167 C "O2'" O N N 168 C "C1'" C N R 169 C N1 N N N 170 C C2 C N N 171 C O2 O N N 172 C N3 N N N 173 C C4 C N N 174 C N4 N N N 175 C C5 C N N 176 C C6 C N N 177 C HOP3 H N N 178 C HOP2 H N N 179 C "H5'" H N N 180 C "H5''" H N N 181 C "H4'" H N N 182 C "H3'" H N N 183 C "HO3'" H N N 184 C "H2'" H N N 185 C "HO2'" H N N 186 C "H1'" H N N 187 C H41 H N N 188 C H42 H N N 189 C H5 H N N 190 C H6 H N N 191 CA CA CA N N 192 G OP3 O N N 193 G P P N N 194 G OP1 O N N 195 G OP2 O N N 196 G "O5'" O N N 197 G "C5'" C N N 198 G "C4'" C N R 199 G "O4'" O N N 200 G "C3'" C N S 201 G "O3'" O N N 202 G "C2'" C N R 203 G "O2'" O N N 204 G "C1'" C N R 205 G N9 N Y N 206 G C8 C Y N 207 G N7 N Y N 208 G C5 C Y N 209 G C6 C N N 210 G O6 O N N 211 G N1 N N N 212 G C2 C N N 213 G N2 N N N 214 G N3 N N N 215 G C4 C Y N 216 G HOP3 H N N 217 G HOP2 H N N 218 G "H5'" H N N 219 G "H5''" H N N 220 G "H4'" H N N 221 G "H3'" H N N 222 G "HO3'" H N N 223 G "H2'" H N N 224 G "HO2'" H N N 225 G "H1'" H N N 226 G H8 H N N 227 G H1 H N N 228 G H21 H N N 229 G H22 H N N 230 GAI C C N N 231 GAI N1 N N N 232 GAI N2 N N N 233 GAI N3 N N N 234 GAI HN1 H N N 235 GAI HN21 H N N 236 GAI HN22 H N N 237 GAI HN31 H N N 238 GAI HN32 H N N 239 GOL C1 C N N 240 GOL O1 O N N 241 GOL C2 C N N 242 GOL O2 O N N 243 GOL C3 C N N 244 GOL O3 O N N 245 GOL H11 H N N 246 GOL H12 H N N 247 GOL HO1 H N N 248 GOL H2 H N N 249 GOL HO2 H N N 250 GOL H31 H N N 251 GOL H32 H N N 252 GOL HO3 H N N 253 H2U P P N N 254 H2U OP1 O N N 255 H2U OP2 O N N 256 H2U OP3 O N N 257 H2U "O5'" O N N 258 H2U "C5'" C N N 259 H2U "C4'" C N R 260 H2U "O4'" O N N 261 H2U "C3'" C N S 262 H2U "O3'" O N N 263 H2U "C1'" C N R 264 H2U "C2'" C N R 265 H2U "O2'" O N N 266 H2U N1 N N N 267 H2U C2 C N N 268 H2U O2 O N N 269 H2U N3 N N N 270 H2U C4 C N N 271 H2U O4 O N N 272 H2U C5 C N N 273 H2U C6 C N N 274 H2U HOP2 H N N 275 H2U HOP3 H N N 276 H2U "H5'" H N N 277 H2U "H5''" H N N 278 H2U "H4'" H N N 279 H2U "H3'" H N N 280 H2U "HO3'" H N N 281 H2U "H1'" H N N 282 H2U "H2'" H N N 283 H2U "HO2'" H N N 284 H2U HN3 H N N 285 H2U H51 H N N 286 H2U H52 H N N 287 H2U H61 H N N 288 H2U H62 H N N 289 HOH O O N N 290 HOH H1 H N N 291 HOH H2 H N N 292 PSU N1 N N N 293 PSU C2 C N N 294 PSU N3 N N N 295 PSU C4 C N N 296 PSU C5 C N N 297 PSU C6 C N N 298 PSU O2 O N N 299 PSU O4 O N N 300 PSU "C1'" C N S 301 PSU "C2'" C N R 302 PSU "O2'" O N N 303 PSU "C3'" C N S 304 PSU "C4'" C N R 305 PSU "O3'" O N N 306 PSU "O4'" O N N 307 PSU "C5'" C N N 308 PSU "O5'" O N N 309 PSU P P N N 310 PSU OP1 O N N 311 PSU OP2 O N N 312 PSU OP3 O N N 313 PSU HN1 H N N 314 PSU HN3 H N N 315 PSU H6 H N N 316 PSU "H1'" H N N 317 PSU "H2'" H N N 318 PSU "HO2'" H N N 319 PSU "H3'" H N N 320 PSU "H4'" H N N 321 PSU "HO3'" H N N 322 PSU "H5'" H N N 323 PSU "H5''" H N N 324 PSU HOP2 H N N 325 PSU HOP3 H N N 326 U OP3 O N N 327 U P P N N 328 U OP1 O N N 329 U OP2 O N N 330 U "O5'" O N N 331 U "C5'" C N N 332 U "C4'" C N R 333 U "O4'" O N N 334 U "C3'" C N S 335 U "O3'" O N N 336 U "C2'" C N R 337 U "O2'" O N N 338 U "C1'" C N R 339 U N1 N N N 340 U C2 C N N 341 U O2 O N N 342 U N3 N N N 343 U C4 C N N 344 U O4 O N N 345 U C5 C N N 346 U C6 C N N 347 U HOP3 H N N 348 U HOP2 H N N 349 U "H5'" H N N 350 U "H5''" H N N 351 U "H4'" H N N 352 U "H3'" H N N 353 U "HO3'" H N N 354 U "H2'" H N N 355 U "HO2'" H N N 356 U "H1'" H N N 357 U H3 H N N 358 U H5 H N N 359 U H6 H N N 360 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3AU P "O5'" sing N N 1 3AU P OP1 doub N N 2 3AU P OP2 sing N N 3 3AU N1 C2 sing N N 4 3AU N1 C6 sing N N 5 3AU N1 "C1'" sing N N 6 3AU C2 O2 doub N N 7 3AU C2 N3 sing N N 8 3AU N3 C4 sing N N 9 3AU N3 C10 sing N N 10 3AU C4 O4 doub N N 11 3AU C4 C5 sing N N 12 3AU C5 C6 doub N N 13 3AU C5 H5 sing N N 14 3AU C6 H6 sing N N 15 3AU "C1'" "C2'" sing N N 16 3AU "C1'" "O4'" sing N N 17 3AU "C1'" "H1'" sing N N 18 3AU C10 C11 sing N N 19 3AU C10 H10 sing N N 20 3AU C10 H10A sing N N 21 3AU C11 C12 sing N N 22 3AU C11 H11 sing N N 23 3AU C11 H11A sing N N 24 3AU C12 C13 sing N N 25 3AU C12 N40 sing N N 26 3AU C12 H12 sing N N 27 3AU C13 O30 doub N N 28 3AU C13 O31 sing N N 29 3AU "C2'" "O2'" sing N N 30 3AU "C2'" "C3'" sing N N 31 3AU "C2'" "H2'" sing N N 32 3AU "O2'" "HO2'" sing N N 33 3AU "C3'" "O3'" sing N N 34 3AU "C3'" "C4'" sing N N 35 3AU "C3'" "H3'" sing N N 36 3AU "O3'" "HO3'" sing N N 37 3AU "C4'" "O4'" sing N N 38 3AU "C4'" "C5'" sing N N 39 3AU "C4'" "H4'" sing N N 40 3AU N40 HN40 sing N N 41 3AU N40 HN4A sing N N 42 3AU "C5'" "O5'" sing N N 43 3AU "C5'" "H5'" sing N N 44 3AU "C5'" "H5'A" sing N N 45 3AU P O11 sing N N 46 3AU O31 H18 sing N N 47 3AU OP2 H19 sing N N 48 3AU O11 H20 sing N N 49 4SU N1 C2 sing N N 50 4SU N1 C6 sing N N 51 4SU N1 "C1'" sing N N 52 4SU C2 N3 sing N N 53 4SU C2 O2 doub N N 54 4SU N3 C4 sing N N 55 4SU N3 HN3 sing N N 56 4SU C4 C5 sing N N 57 4SU C4 S4 doub N N 58 4SU C5 C6 doub N N 59 4SU C5 H5 sing N N 60 4SU C6 H6 sing N N 61 4SU "C1'" "C2'" sing N N 62 4SU "C1'" "O4'" sing N N 63 4SU "C1'" "H1'" sing N N 64 4SU "C2'" "O2'" sing N N 65 4SU "C2'" "C3'" sing N N 66 4SU "C2'" "H2'" sing N N 67 4SU "O2'" "HO2'" sing N N 68 4SU "C3'" "C4'" sing N N 69 4SU "C3'" "O3'" sing N N 70 4SU "C3'" "H3'" sing N N 71 4SU "C4'" "O4'" sing N N 72 4SU "C4'" "C5'" sing N N 73 4SU "C4'" "H4'" sing N N 74 4SU "O3'" "HO3'" sing N N 75 4SU "C5'" "O5'" sing N N 76 4SU "C5'" "H5'" sing N N 77 4SU "C5'" "H5''" sing N N 78 4SU "O5'" P sing N N 79 4SU P OP1 doub N N 80 4SU P OP2 sing N N 81 4SU P OP3 sing N N 82 4SU OP2 HOP2 sing N N 83 4SU OP3 HOP3 sing N N 84 5MU N1 C2 sing N N 85 5MU N1 C6 sing N N 86 5MU N1 "C1'" sing N N 87 5MU C2 N3 sing N N 88 5MU C2 O2 doub N N 89 5MU N3 C4 sing N N 90 5MU N3 HN3 sing N N 91 5MU C4 C5 sing N N 92 5MU C4 O4 doub N N 93 5MU C5 C5M sing N N 94 5MU C5 C6 doub N N 95 5MU C5M H71 sing N N 96 5MU C5M H72 sing N N 97 5MU C5M H73 sing N N 98 5MU C6 H6 sing N N 99 5MU "C1'" "C2'" sing N N 100 5MU "C1'" "O4'" sing N N 101 5MU "C1'" "H1'" sing N N 102 5MU "C2'" "O2'" sing N N 103 5MU "C2'" "C3'" sing N N 104 5MU "C2'" "H2'" sing N N 105 5MU "O2'" "HO2'" sing N N 106 5MU "C3'" "C4'" sing N N 107 5MU "C3'" "O3'" sing N N 108 5MU "C3'" "H3'" sing N N 109 5MU "C4'" "O4'" sing N N 110 5MU "C4'" "C5'" sing N N 111 5MU "C4'" "H4'" sing N N 112 5MU "O3'" "HO3'" sing N N 113 5MU "C5'" "O5'" sing N N 114 5MU "C5'" "H5'" sing N N 115 5MU "C5'" "H5''" sing N N 116 5MU "O5'" P sing N N 117 5MU P OP1 doub N N 118 5MU P OP2 sing N N 119 5MU P OP3 sing N N 120 5MU OP2 HOP2 sing N N 121 5MU OP3 HOP3 sing N N 122 A OP3 P sing N N 123 A OP3 HOP3 sing N N 124 A P OP1 doub N N 125 A P OP2 sing N N 126 A P "O5'" sing N N 127 A OP2 HOP2 sing N N 128 A "O5'" "C5'" sing N N 129 A "C5'" "C4'" sing N N 130 A "C5'" "H5'" sing N N 131 A "C5'" "H5''" sing N N 132 A "C4'" "O4'" sing N N 133 A "C4'" "C3'" sing N N 134 A "C4'" "H4'" sing N N 135 A "O4'" "C1'" sing N N 136 A "C3'" "O3'" sing N N 137 A "C3'" "C2'" sing N N 138 A "C3'" "H3'" sing N N 139 A "O3'" "HO3'" sing N N 140 A "C2'" "O2'" sing N N 141 A "C2'" "C1'" sing N N 142 A "C2'" "H2'" sing N N 143 A "O2'" "HO2'" sing N N 144 A "C1'" N9 sing N N 145 A "C1'" "H1'" sing N N 146 A N9 C8 sing Y N 147 A N9 C4 sing Y N 148 A C8 N7 doub Y N 149 A C8 H8 sing N N 150 A N7 C5 sing Y N 151 A C5 C6 sing Y N 152 A C5 C4 doub Y N 153 A C6 N6 sing N N 154 A C6 N1 doub Y N 155 A N6 H61 sing N N 156 A N6 H62 sing N N 157 A N1 C2 sing Y N 158 A C2 N3 doub Y N 159 A C2 H2 sing N N 160 A N3 C4 sing Y N 161 C OP3 P sing N N 162 C OP3 HOP3 sing N N 163 C P OP1 doub N N 164 C P OP2 sing N N 165 C P "O5'" sing N N 166 C OP2 HOP2 sing N N 167 C "O5'" "C5'" sing N N 168 C "C5'" "C4'" sing N N 169 C "C5'" "H5'" sing N N 170 C "C5'" "H5''" sing N N 171 C "C4'" "O4'" sing N N 172 C "C4'" "C3'" sing N N 173 C "C4'" "H4'" sing N N 174 C "O4'" "C1'" sing N N 175 C "C3'" "O3'" sing N N 176 C "C3'" "C2'" sing N N 177 C "C3'" "H3'" sing N N 178 C "O3'" "HO3'" sing N N 179 C "C2'" "O2'" sing N N 180 C "C2'" "C1'" sing N N 181 C "C2'" "H2'" sing N N 182 C "O2'" "HO2'" sing N N 183 C "C1'" N1 sing N N 184 C "C1'" "H1'" sing N N 185 C N1 C2 sing N N 186 C N1 C6 sing N N 187 C C2 O2 doub N N 188 C C2 N3 sing N N 189 C N3 C4 doub N N 190 C C4 N4 sing N N 191 C C4 C5 sing N N 192 C N4 H41 sing N N 193 C N4 H42 sing N N 194 C C5 C6 doub N N 195 C C5 H5 sing N N 196 C C6 H6 sing N N 197 G OP3 P sing N N 198 G OP3 HOP3 sing N N 199 G P OP1 doub N N 200 G P OP2 sing N N 201 G P "O5'" sing N N 202 G OP2 HOP2 sing N N 203 G "O5'" "C5'" sing N N 204 G "C5'" "C4'" sing N N 205 G "C5'" "H5'" sing N N 206 G "C5'" "H5''" sing N N 207 G "C4'" "O4'" sing N N 208 G "C4'" "C3'" sing N N 209 G "C4'" "H4'" sing N N 210 G "O4'" "C1'" sing N N 211 G "C3'" "O3'" sing N N 212 G "C3'" "C2'" sing N N 213 G "C3'" "H3'" sing N N 214 G "O3'" "HO3'" sing N N 215 G "C2'" "O2'" sing N N 216 G "C2'" "C1'" sing N N 217 G "C2'" "H2'" sing N N 218 G "O2'" "HO2'" sing N N 219 G "C1'" N9 sing N N 220 G "C1'" "H1'" sing N N 221 G N9 C8 sing Y N 222 G N9 C4 sing Y N 223 G C8 N7 doub Y N 224 G C8 H8 sing N N 225 G N7 C5 sing Y N 226 G C5 C6 sing N N 227 G C5 C4 doub Y N 228 G C6 O6 doub N N 229 G C6 N1 sing N N 230 G N1 C2 sing N N 231 G N1 H1 sing N N 232 G C2 N2 sing N N 233 G C2 N3 doub N N 234 G N2 H21 sing N N 235 G N2 H22 sing N N 236 G N3 C4 sing N N 237 GAI C N1 doub N N 238 GAI C N2 sing N N 239 GAI C N3 sing N N 240 GAI N1 HN1 sing N N 241 GAI N2 HN21 sing N N 242 GAI N2 HN22 sing N N 243 GAI N3 HN31 sing N N 244 GAI N3 HN32 sing N N 245 GOL C1 O1 sing N N 246 GOL C1 C2 sing N N 247 GOL C1 H11 sing N N 248 GOL C1 H12 sing N N 249 GOL O1 HO1 sing N N 250 GOL C2 O2 sing N N 251 GOL C2 C3 sing N N 252 GOL C2 H2 sing N N 253 GOL O2 HO2 sing N N 254 GOL C3 O3 sing N N 255 GOL C3 H31 sing N N 256 GOL C3 H32 sing N N 257 GOL O3 HO3 sing N N 258 H2U P OP1 doub N N 259 H2U P OP2 sing N N 260 H2U P OP3 sing N N 261 H2U P "O5'" sing N N 262 H2U OP2 HOP2 sing N N 263 H2U OP3 HOP3 sing N N 264 H2U "O5'" "C5'" sing N N 265 H2U "C5'" "C4'" sing N N 266 H2U "C5'" "H5'" sing N N 267 H2U "C5'" "H5''" sing N N 268 H2U "C4'" "O4'" sing N N 269 H2U "C4'" "C3'" sing N N 270 H2U "C4'" "H4'" sing N N 271 H2U "O4'" "C1'" sing N N 272 H2U "C3'" "O3'" sing N N 273 H2U "C3'" "C2'" sing N N 274 H2U "C3'" "H3'" sing N N 275 H2U "O3'" "HO3'" sing N N 276 H2U "C1'" "C2'" sing N N 277 H2U "C1'" N1 sing N N 278 H2U "C1'" "H1'" sing N N 279 H2U "C2'" "O2'" sing N N 280 H2U "C2'" "H2'" sing N N 281 H2U "O2'" "HO2'" sing N N 282 H2U N1 C2 sing N N 283 H2U N1 C6 sing N N 284 H2U C2 O2 doub N N 285 H2U C2 N3 sing N N 286 H2U N3 C4 sing N N 287 H2U N3 HN3 sing N N 288 H2U C4 O4 doub N N 289 H2U C4 C5 sing N N 290 H2U C5 C6 sing N N 291 H2U C5 H51 sing N N 292 H2U C5 H52 sing N N 293 H2U C6 H61 sing N N 294 H2U C6 H62 sing N N 295 HOH O H1 sing N N 296 HOH O H2 sing N N 297 PSU N1 C2 sing N N 298 PSU N1 C6 sing N N 299 PSU N1 HN1 sing N N 300 PSU C2 N3 sing N N 301 PSU C2 O2 doub N N 302 PSU N3 C4 sing N N 303 PSU N3 HN3 sing N N 304 PSU C4 C5 sing N N 305 PSU C4 O4 doub N N 306 PSU C5 C6 doub N N 307 PSU C5 "C1'" sing N N 308 PSU C6 H6 sing N N 309 PSU "C1'" "C2'" sing N N 310 PSU "C1'" "O4'" sing N N 311 PSU "C1'" "H1'" sing N N 312 PSU "C2'" "O2'" sing N N 313 PSU "C2'" "C3'" sing N N 314 PSU "C2'" "H2'" sing N N 315 PSU "O2'" "HO2'" sing N N 316 PSU "C3'" "C4'" sing N N 317 PSU "C3'" "O3'" sing N N 318 PSU "C3'" "H3'" sing N N 319 PSU "C4'" "O4'" sing N N 320 PSU "C4'" "C5'" sing N N 321 PSU "C4'" "H4'" sing N N 322 PSU "O3'" "HO3'" sing N N 323 PSU "C5'" "O5'" sing N N 324 PSU "C5'" "H5'" sing N N 325 PSU "C5'" "H5''" sing N N 326 PSU "O5'" P sing N N 327 PSU P OP1 doub N N 328 PSU P OP2 sing N N 329 PSU P OP3 sing N N 330 PSU OP2 HOP2 sing N N 331 PSU OP3 HOP3 sing N N 332 U OP3 P sing N N 333 U OP3 HOP3 sing N N 334 U P OP1 doub N N 335 U P OP2 sing N N 336 U P "O5'" sing N N 337 U OP2 HOP2 sing N N 338 U "O5'" "C5'" sing N N 339 U "C5'" "C4'" sing N N 340 U "C5'" "H5'" sing N N 341 U "C5'" "H5''" sing N N 342 U "C4'" "O4'" sing N N 343 U "C4'" "C3'" sing N N 344 U "C4'" "H4'" sing N N 345 U "O4'" "C1'" sing N N 346 U "C3'" "O3'" sing N N 347 U "C3'" "C2'" sing N N 348 U "C3'" "H3'" sing N N 349 U "O3'" "HO3'" sing N N 350 U "C2'" "O2'" sing N N 351 U "C2'" "C1'" sing N N 352 U "C2'" "H2'" sing N N 353 U "O2'" "HO2'" sing N N 354 U "C1'" N1 sing N N 355 U "C1'" "H1'" sing N N 356 U N1 C2 sing N N 357 U N1 C6 sing N N 358 U C2 O2 doub N N 359 U C2 N3 sing N N 360 U N3 C4 sing N N 361 U N3 H3 sing N N 362 U C4 O4 doub N N 363 U C4 C5 sing N N 364 U C5 C6 doub N N 365 U C5 H5 sing N N 366 U C6 H6 sing N N 367 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6Y3G 'double helix' 6Y3G 'a-form double helix' 6Y3G 'parallel strands' 6Y3G 'hairpin loop' 6Y3G 'mismatched base pair' 6Y3G 'four-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 72 1_555 -0.097 -0.322 -1.306 -10.315 -2.154 -3.978 1 F_G1:C72_F F 1 ? F 72 ? 19 1 1 A C 2 1_555 A G 71 1_555 0.127 -0.195 -0.631 -7.294 1.732 -4.377 2 F_C2:G71_F F 2 ? F 71 ? 19 1 1 A C 3 1_555 A G 70 1_555 0.098 -0.211 -0.328 -9.136 11.824 -6.690 3 F_C3:G70_F F 3 ? F 70 ? 19 1 1 A C 4 1_555 A G 69 1_555 0.164 -0.142 0.495 -3.177 -7.999 1.382 4 F_C4:G69_F F 4 ? F 69 ? 19 1 1 A G 5 1_555 A C 68 1_555 -0.250 -0.087 -0.273 -5.653 -7.236 2.662 5 F_G5:C68_F F 5 ? F 68 ? 19 1 1 A G 6 1_555 A C 67 1_555 -0.155 -0.155 -0.315 -8.435 -4.517 -1.668 6 F_G6:C67_F F 6 ? F 67 ? 19 1 1 A A 7 1_555 A U 66 1_555 0.056 -0.121 -0.151 1.795 7.130 -0.895 7 F_A7:U66_F F 7 ? F 66 ? 20 1 1 A C 49 1_555 A G 65 1_555 0.116 -0.174 -0.004 1.446 3.008 1.932 8 F_C49:G65_F F 49 ? F 65 ? 19 1 1 A U 50 1_555 A A 64 1_555 -0.211 -0.088 0.141 -1.958 -0.547 1.158 9 F_U50:A64_F F 50 ? F 64 ? 20 1 1 A U 51 1_555 A G 63 1_555 1.435 -0.632 -0.009 -0.860 1.284 3.368 10 F_U51:G63_F F 51 ? F 63 ? 28 1 1 A G 52 1_555 A C 62 1_555 -0.187 -0.160 -0.021 -3.134 0.559 1.748 11 F_G52:C62_F F 52 ? F 62 ? 19 1 1 A G 53 1_555 A C 61 1_555 -0.221 -0.139 0.088 -9.788 -3.604 1.604 12 F_G53:C61_F F 53 ? F 61 ? 19 1 1 A 5MU 54 1_555 A A 58 1_555 3.923 -1.293 0.541 2.388 13.579 -99.481 13 F_5MU54:A58_F F 54 ? F 58 ? 24 4 1 A PSU 55 1_555 A G 18 1_555 1.228 -4.925 0.095 18.967 8.742 -87.975 14 F_PSU55:G18_F F 55 ? F 18 ? ? 2 1 A G 10 1_555 A C 25 1_555 -0.169 -0.142 0.190 -1.545 0.440 2.016 15 F_G10:C25_F F 10 ? F 25 ? 19 1 1 A C 11 1_555 A G 24 1_555 0.198 -0.158 -0.047 -2.645 1.404 0.737 16 F_C11:G24_F F 11 ? F 24 ? 19 1 1 A U 12 1_555 A A 23 1_555 -0.130 -0.077 0.049 -4.725 -1.850 0.334 17 F_U12:A23_F F 12 ? F 23 ? 20 1 1 A C 13 1_555 A G 22 1_555 0.139 -0.102 0.101 -5.191 -1.997 0.405 18 F_C13:G22_F F 13 ? F 22 ? 19 1 1 A A 14 1_555 A 4SU 8 1_555 -4.262 -2.040 -0.035 2.191 -0.467 -98.559 19 F_A14:4SU8_F F 14 ? F 8 ? 24 4 1 A G 15 1_555 A C 48 1_555 -0.063 3.385 -0.317 5.692 -13.627 147.192 20 F_G15:C48_F F 15 ? F 48 ? 22 2 1 A G 19 1_555 A C 56 1_555 -0.157 -0.115 0.241 -14.363 -12.353 0.771 21 F_G19:C56_F F 19 ? F 56 ? 19 1 1 A G 27 1_555 A C 43 1_555 -0.206 -0.082 -0.277 -5.916 -4.774 1.123 22 F_G27:C43_F F 27 ? F 43 ? 19 1 1 A G 28 1_555 A C 42 1_555 -0.188 -0.114 -0.189 -6.033 -0.865 2.701 23 F_G28:C42_F F 28 ? F 42 ? 19 1 1 A G 29 1_555 A C 41 1_555 -0.220 -0.179 -0.135 -9.817 -3.649 -0.774 24 F_G29:C41_F F 29 ? F 41 ? 19 1 1 A G 30 1_555 A C 40 1_555 -0.193 -0.135 0.076 -8.875 -6.442 -2.047 25 F_G30:C40_F F 30 ? F 40 ? 19 1 1 A A 31 1_555 A PSU 39 1_555 0.203 -0.022 0.260 -7.332 -3.792 2.175 26 F_A31:PSU39_F F 31 ? F 39 ? 21 1 1 A PSU 32 1_555 A A 38 1_555 4.043 0.121 0.685 7.334 13.301 -70.578 27 F_PSU32:A38_F F 32 ? F 38 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 72 1_555 A C 2 1_555 A G 71 1_555 -0.574 -1.327 3.213 -6.830 0.252 32.554 -2.361 -0.138 3.253 0.444 12.019 33.245 1 FF_G1C2:G71C72_FF F 1 ? F 72 ? F 2 ? F 71 ? 1 A C 2 1_555 A G 71 1_555 A C 3 1_555 A G 70 1_555 0.503 -1.178 3.202 -0.046 3.298 33.804 -2.525 -0.869 3.076 5.656 0.078 33.960 2 FF_C2C3:G70G71_FF F 2 ? F 71 ? F 3 ? F 70 ? 1 A C 3 1_555 A G 70 1_555 A C 4 1_555 A G 69 1_555 -0.920 -2.997 2.962 -11.416 20.502 28.213 -6.702 0.396 0.937 35.328 19.671 36.544 3 FF_C3C4:G69G70_FF F 3 ? F 70 ? F 4 ? F 69 ? 1 A C 4 1_555 A G 69 1_555 A G 5 1_555 A C 68 1_555 0.154 -2.052 3.317 2.954 4.867 28.345 -5.153 0.324 2.932 9.813 -5.957 28.899 4 FF_C4G5:C68G69_FF F 4 ? F 69 ? F 5 ? F 68 ? 1 A G 5 1_555 A C 68 1_555 A G 6 1_555 A C 67 1_555 0.016 -1.553 3.281 -2.794 4.579 33.415 -3.388 -0.466 3.037 7.900 4.821 33.830 5 FF_G5G6:C67C68_FF F 5 ? F 68 ? F 6 ? F 67 ? 1 A G 6 1_555 A C 67 1_555 A A 7 1_555 A U 66 1_555 -0.428 -1.312 2.896 1.310 7.557 32.811 -3.299 0.917 2.522 13.155 -2.281 33.672 6 FF_G6A7:U66C67_FF F 6 ? F 67 ? F 7 ? F 66 ? 1 A A 7 1_555 A U 66 1_555 A C 49 1_555 A G 65 1_555 0.447 -1.874 3.278 0.322 5.793 36.026 -3.764 -0.671 2.955 9.292 -0.517 36.475 7 FF_A7C49:G65U66_FF F 7 ? F 66 ? F 49 ? F 65 ? 1 A C 49 1_555 A G 65 1_555 A U 50 1_555 A A 64 1_555 -0.506 -2.398 3.135 -1.422 3.414 28.325 -5.575 0.728 2.854 6.939 2.890 28.560 8 FF_C49U50:A64G65_FF F 49 ? F 65 ? F 50 ? F 64 ? 1 A U 50 1_555 A A 64 1_555 A U 51 1_555 A G 63 1_555 -0.004 -1.462 3.251 1.600 3.077 37.984 -2.618 0.203 3.124 4.716 -2.451 38.136 9 FF_U50U51:G63A64_FF F 50 ? F 64 ? F 51 ? F 63 ? 1 A U 51 1_555 A G 63 1_555 A G 52 1_555 A C 62 1_555 0.000 -2.020 3.242 0.852 4.053 25.931 -5.479 0.216 2.896 8.958 -1.884 26.254 10 FF_U51G52:C62G63_FF F 51 ? F 63 ? F 52 ? F 62 ? 1 A G 52 1_555 A C 62 1_555 A G 53 1_555 A C 61 1_555 0.933 -2.022 3.197 1.434 6.355 34.203 -4.279 -1.357 2.823 10.685 -2.411 34.799 11 FF_G52G53:C61C62_FF F 52 ? F 62 ? F 53 ? F 61 ? 1 A G 53 1_555 A C 61 1_555 A 5MU 54 1_555 A A 58 1_555 -2.791 -2.220 3.183 2.048 -2.745 84.388 -1.589 2.123 3.185 -2.042 -1.524 84.444 12 FF_G535MU54:A58C61_FF F 53 ? F 61 ? F 54 ? F 58 ? 1 A 5MU 54 1_555 A A 58 1_555 A PSU 55 1_555 A G 18 1_555 2.086 -2.592 3.429 6.889 0.749 42.090 -3.647 -2.112 3.666 1.034 -9.514 42.631 13 FF_5MU54PSU55:G18A58_FF F 54 ? F 58 ? F 55 ? F 18 ? 1 A G 10 1_555 A C 25 1_555 A C 11 1_555 A G 24 1_555 -0.842 -1.762 3.157 1.194 5.480 37.740 -3.337 1.428 2.856 8.414 -1.834 38.140 14 FF_G10C11:G24C25_FF F 10 ? F 25 ? F 11 ? F 24 ? 1 A C 11 1_555 A G 24 1_555 A U 12 1_555 A A 23 1_555 -0.079 -1.433 3.193 3.085 6.599 35.628 -3.160 0.531 2.875 10.648 -4.978 36.342 15 FF_C11U12:A23G24_FF F 11 ? F 24 ? F 12 ? F 23 ? 1 A U 12 1_555 A A 23 1_555 A C 13 1_555 A G 22 1_555 1.331 -2.058 3.278 7.845 3.716 26.911 -5.097 -0.870 3.222 7.734 -16.325 28.252 16 FF_U12C13:G22A23_FF F 12 ? F 23 ? F 13 ? F 22 ? 1 A C 13 1_555 A G 22 1_555 A A 14 1_555 A 4SU 8 1_555 -1.711 -0.375 3.232 -0.587 -3.436 62.456 -0.207 1.622 3.260 -3.311 0.565 62.543 17 FF_C13A14:4SU8G22_FF F 13 ? F 22 ? F 14 ? F 8 ? 1 A A 14 1_555 A 4SU 8 1_555 A G 15 1_555 A C 48 1_555 2.075 -3.625 3.692 3.119 6.052 -74.973 2.757 1.809 3.857 -4.962 2.557 -75.236 18 FF_A14G15:C484SU8_FF F 14 ? F 8 ? F 15 ? F 48 ? 1 A G 27 1_555 A C 43 1_555 A G 28 1_555 A C 42 1_555 -0.397 -2.359 3.168 -2.370 4.748 31.694 -5.046 0.327 2.815 8.619 4.301 32.124 19 FF_G27G28:C42C43_FF F 27 ? F 43 ? F 28 ? F 42 ? 1 A G 28 1_555 A C 42 1_555 A G 29 1_555 A C 41 1_555 0.072 -2.159 3.388 1.394 -2.530 25.197 -4.136 0.267 3.583 -5.776 -3.182 25.359 20 FF_G28G29:C41C42_FF F 28 ? F 42 ? F 29 ? F 41 ? 1 A G 29 1_555 A C 41 1_555 A G 30 1_555 A C 40 1_555 0.645 -2.028 3.194 2.205 2.676 30.447 -4.343 -0.804 3.047 5.075 -4.181 30.639 21 FF_G29G30:C40C41_FF F 29 ? F 41 ? F 30 ? F 40 ? 1 A G 30 1_555 A C 40 1_555 A A 31 1_555 A PSU 39 1_555 0.215 -1.841 3.100 3.140 1.361 38.178 -2.965 0.042 3.043 2.075 -4.789 38.326 22 FF_G30A31:PSU39C40_FF F 30 ? F 40 ? F 31 ? F 39 ? 1 A A 31 1_555 A PSU 39 1_555 A PSU 32 1_555 A A 38 1_555 1.746 -2.748 3.183 3.044 7.112 86.437 -2.150 -1.208 3.043 5.184 -2.218 86.714 23 FF_A31PSU32:A38PSU39_FF F 31 ? F 39 ? F 32 ? F 38 ? # _pdbx_audit_support.funding_organization 'French National Research Agency' _pdbx_audit_support.country France _pdbx_audit_support.grant_number 14CE090021 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4YCO _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 64 2 2' _space_group.name_Hall 'P 64 2 (x,y,z+1/6)' _space_group.IT_number 181 _space_group.crystal_system hexagonal _space_group.id 1 # _atom_sites.entry_id 6Y3G _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.009123 _atom_sites.fract_transf_matrix[1][2] 0.005267 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010534 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007219 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CA ? ? 16.26893 3.65395 ? ? 3.58509 77.28589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.99627 ? ? ? 14.84254 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_