data_6Y5U # _entry.id 6Y5U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.337 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6Y5U WWPDB D_1292106964 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6Y5U _pdbx_database_status.recvd_initial_deposition_date 2020-02-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Blower, T.R.' 1 0000-0002-7390-6458 'Usher, B.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Adv' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2375-2548 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 6 _citation.language ? _citation.page_first eabb6651 _citation.page_last eabb6651 _citation.title 'A nucleotidyltransferase toxin inhibits growth of Mycobacterium tuberculosis through inactivation of tRNA acceptor stems.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1126/sciadv.abb6651 _citation.pdbx_database_id_PubMed 32923609 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cai, Y.' 1 0000-0003-2922-2136 primary 'Usher, B.' 2 0000-0002-2649-1210 primary 'Gutierrez, C.' 3 0000-0003-1777-0223 primary 'Tolcan, A.' 4 ? primary 'Mansour, M.' 5 0000-0003-1028-6113 primary 'Fineran, P.C.' 6 0000-0002-4639-6704 primary 'Condon, C.' 7 0000-0002-2199-9621 primary 'Neyrolles, O.' 8 0000-0003-0047-5885 primary 'Genevaux, P.' 9 0000-0001-7539-3126 primary 'Blower, T.R.' 10 0000-0002-7390-6458 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6Y5U _cell.details ? _cell.formula_units_Z ? _cell.length_a 95.410 _cell.length_a_esd ? _cell.length_b 95.410 _cell.length_b_esd ? _cell.length_c 69.026 _cell.length_c_esd ? _cell.volume 544162.236 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y5U _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ;P 32 2" ; _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Rv1045 31978.451 1 ? ? ? ? 2 water nat water 18.015 281 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;TKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRT (SEP)KDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAG NADQFDTLTSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIA IFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR ; _entity_poly.pdbx_seq_one_letter_code_can ;TKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDF DTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTL TSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQH PWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 LYS n 1 3 PRO n 1 4 TYR n 1 5 SER n 1 6 SER n 1 7 PRO n 1 8 PRO n 1 9 THR n 1 10 ASN n 1 11 LEU n 1 12 ARG n 1 13 SER n 1 14 LEU n 1 15 ARG n 1 16 ASP n 1 17 ARG n 1 18 LEU n 1 19 THR n 1 20 GLN n 1 21 VAL n 1 22 ALA n 1 23 GLU n 1 24 ARG n 1 25 GLN n 1 26 GLY n 1 27 VAL n 1 28 VAL n 1 29 PHE n 1 30 GLY n 1 31 ARG n 1 32 LEU n 1 33 GLN n 1 34 ARG n 1 35 HIS n 1 36 VAL n 1 37 ALA n 1 38 MET n 1 39 ILE n 1 40 VAL n 1 41 VAL n 1 42 ALA n 1 43 GLN n 1 44 PHE n 1 45 ALA n 1 46 ALA n 1 47 THR n 1 48 LEU n 1 49 THR n 1 50 ASP n 1 51 ASP n 1 52 THR n 1 53 GLY n 1 54 ALA n 1 55 PRO n 1 56 LEU n 1 57 LEU n 1 58 LEU n 1 59 VAL n 1 60 LYS n 1 61 GLY n 1 62 GLY n 1 63 SER n 1 64 SER n 1 65 LEU n 1 66 GLU n 1 67 LEU n 1 68 ARG n 1 69 ARG n 1 70 GLY n 1 71 ILE n 1 72 PRO n 1 73 ASP n 1 74 SER n 1 75 ARG n 1 76 THR n 1 77 SEP n 1 78 LYS n 1 79 ASP n 1 80 PHE n 1 81 ASP n 1 82 THR n 1 83 VAL n 1 84 ALA n 1 85 ARG n 1 86 ARG n 1 87 ASP n 1 88 ILE n 1 89 GLU n 1 90 LEU n 1 91 ILE n 1 92 HIS n 1 93 GLU n 1 94 GLN n 1 95 LEU n 1 96 ALA n 1 97 ASP n 1 98 ALA n 1 99 GLY n 1 100 GLU n 1 101 THR n 1 102 GLY n 1 103 TRP n 1 104 GLU n 1 105 GLY n 1 106 PHE n 1 107 THR n 1 108 ALA n 1 109 ILE n 1 110 PHE n 1 111 THR n 1 112 ALA n 1 113 PRO n 1 114 GLU n 1 115 GLU n 1 116 ILE n 1 117 ASP n 1 118 VAL n 1 119 PRO n 1 120 GLY n 1 121 MET n 1 122 PRO n 1 123 VAL n 1 124 LYS n 1 125 PRO n 1 126 ARG n 1 127 ARG n 1 128 PHE n 1 129 THR n 1 130 ALA n 1 131 LYS n 1 132 LEU n 1 133 SER n 1 134 TYR n 1 135 ARG n 1 136 GLY n 1 137 ARG n 1 138 ALA n 1 139 PHE n 1 140 ALA n 1 141 THR n 1 142 VAL n 1 143 PRO n 1 144 ILE n 1 145 GLU n 1 146 VAL n 1 147 SER n 1 148 SER n 1 149 VAL n 1 150 GLU n 1 151 ALA n 1 152 GLY n 1 153 ASN n 1 154 ALA n 1 155 ASP n 1 156 GLN n 1 157 PHE n 1 158 ASP n 1 159 THR n 1 160 LEU n 1 161 THR n 1 162 SER n 1 163 ASP n 1 164 ALA n 1 165 LEU n 1 166 GLY n 1 167 LEU n 1 168 VAL n 1 169 GLY n 1 170 VAL n 1 171 PRO n 1 172 ALA n 1 173 ALA n 1 174 VAL n 1 175 ALA n 1 176 VAL n 1 177 PRO n 1 178 CYS n 1 179 MET n 1 180 THR n 1 181 ILE n 1 182 PRO n 1 183 TRP n 1 184 GLN n 1 185 ILE n 1 186 ALA n 1 187 GLN n 1 188 LYS n 1 189 LEU n 1 190 HIS n 1 191 ALA n 1 192 VAL n 1 193 THR n 1 194 ALA n 1 195 VAL n 1 196 LEU n 1 197 GLU n 1 198 GLU n 1 199 PRO n 1 200 LYS n 1 201 VAL n 1 202 ASN n 1 203 ASP n 1 204 ARG n 1 205 ALA n 1 206 HIS n 1 207 ASP n 1 208 LEU n 1 209 VAL n 1 210 ASP n 1 211 LEU n 1 212 GLN n 1 213 LEU n 1 214 LEU n 1 215 GLU n 1 216 GLY n 1 217 LEU n 1 218 LEU n 1 219 LEU n 1 220 ASP n 1 221 ALA n 1 222 ASP n 1 223 LEU n 1 224 MET n 1 225 PRO n 1 226 THR n 1 227 ARG n 1 228 SER n 1 229 ALA n 1 230 CYS n 1 231 ILE n 1 232 ALA n 1 233 ILE n 1 234 PHE n 1 235 GLU n 1 236 ALA n 1 237 ARG n 1 238 ALA n 1 239 GLN n 1 240 HIS n 1 241 PRO n 1 242 TRP n 1 243 PRO n 1 244 PRO n 1 245 ARG n 1 246 VAL n 1 247 ALA n 1 248 THR n 1 249 LEU n 1 250 PRO n 1 251 HIS n 1 252 TRP n 1 253 PRO n 1 254 LEU n 1 255 ILE n 1 256 TYR n 1 257 ALA n 1 258 GLY n 1 259 ALA n 1 260 LEU n 1 261 GLU n 1 262 GLY n 1 263 LEU n 1 264 ASP n 1 265 HIS n 1 266 LEU n 1 267 GLU n 1 268 LEU n 1 269 ALA n 1 270 ARG n 1 271 THR n 1 272 VAL n 1 273 ASP n 1 274 ALA n 1 275 ALA n 1 276 ALA n 1 277 GLN n 1 278 ALA n 1 279 VAL n 1 280 GLN n 1 281 ARG n 1 282 PHE n 1 283 VAL n 1 284 ALA n 1 285 ARG n 1 286 ILE n 1 287 ASP n 1 288 ARG n 1 289 ALA n 1 290 THR n 1 291 LYS n 1 292 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 292 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Rv1045 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium tuberculosis H37Rv' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83332 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code P96356_MYCTU _struct_ref.pdbx_db_accession P96356 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDF DTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTL TSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQH PWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6Y5U _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 292 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P96356 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 293 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 293 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SEP 'L-peptide linking' n PHOSPHOSERINE PHOSPHONOSERINE 'C3 H8 N O6 P' 185.072 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Y5U _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.84 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 56.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.2 M Calcium Acetate Hydrate 0.1 M Tris pH 8.5 25% w/v PEG 2000 MME ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-09-30 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 26.57 _reflns.entry_id 6Y5U _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.59 _reflns.d_resolution_low 52.97 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 49008 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.95 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.68 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.59 _reflns_shell.d_res_low 1.647 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 4834 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.672 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 34.08 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6Y5U _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.59 _refine.ls_d_res_low 52.97 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 49001 _refine.ls_number_reflns_R_free 2437 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.92 _refine.ls_percent_reflns_R_free 4.97 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2036 _refine.ls_R_factor_R_free 0.2249 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2024 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.7057 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2067 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.59 _refine_hist.d_res_low 52.97 _refine_hist.number_atoms_solvent 281 _refine_hist.number_atoms_total 2494 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2213 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0059 ? 2260 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.9368 ? 3086 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0529 ? 361 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0070 ? 404 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 22.1597 ? 830 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.59 1.62 . . 152 2651 99.22 . . . 0.3136 . 0.3074 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.62 1.66 . . 160 2725 99.97 . . . 0.3026 . 0.2690 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.66 1.70 . . 173 2653 99.93 . . . 0.2687 . 0.2637 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.70 1.74 . . 143 2737 99.93 . . . 0.2997 . 0.2437 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.74 1.79 . . 109 2738 99.93 . . . 0.2876 . 0.2358 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.79 1.84 . . 141 2710 99.96 . . . 0.2504 . 0.2215 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.84 1.90 . . 178 2689 100.00 . . . 0.2312 . 0.2172 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.90 1.97 . . 117 2742 100.00 . . . 0.2566 . 0.2210 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.97 2.04 . . 106 2761 100.00 . . . 0.2288 . 0.2135 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.04 2.14 . . 132 2741 99.97 . . . 0.2543 . 0.2044 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.14 2.25 . . 134 2741 99.97 . . . 0.2599 . 0.2169 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.25 2.39 . . 114 2779 100.00 . . . 0.2796 . 0.2175 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.39 2.58 . . 135 2750 100.00 . . . 0.2645 . 0.2156 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.58 2.83 . . 124 2759 100.00 . . . 0.2605 . 0.2177 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.83 3.24 . . 185 2731 100.00 . . . 0.2227 . 0.2043 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.24 4.09 . . 156 2794 100.00 . . . 0.2011 . 0.1779 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.09 52.97 . . 178 2863 99.87 . . . 0.1827 . 0.1773 . . . . . . . . . . . # _struct.entry_id 6Y5U _struct.title 'MenT3 (aka TglT), nucleotidyltransferase toxin Rv1045 from Mycobacterium tuberculosis' _struct.pdbx_descriptor Rv1045 _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Y5U _struct_keywords.text 'Nucleotidyltransferase Toxin-antitoxin system Mycobacterium tuberculosis, TOXIN' _struct_keywords.pdbx_keywords TOXIN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 10 ? GLY A 26 ? ASN A 11 GLY A 27 1 ? 17 HELX_P HELX_P2 AA2 VAL A 28 ? THR A 47 ? VAL A 29 THR A 48 1 ? 20 HELX_P HELX_P3 AA3 GLY A 61 ? GLY A 70 ? GLY A 62 GLY A 71 1 ? 10 HELX_P HELX_P4 AA4 ILE A 71 ? SER A 74 ? ILE A 72 SER A 75 5 ? 4 HELX_P HELX_P5 AA5 GLU A 89 ? GLY A 102 ? GLU A 90 GLY A 103 1 ? 14 HELX_P HELX_P6 AA6 LEU A 165 ? GLY A 169 ? LEU A 166 GLY A 170 5 ? 5 HELX_P HELX_P7 AA7 THR A 180 ? THR A 193 ? THR A 181 THR A 194 1 ? 14 HELX_P HELX_P8 AA8 ALA A 205 ? LEU A 219 ? ALA A 206 LEU A 220 1 ? 15 HELX_P HELX_P9 AA9 LEU A 223 ? ALA A 238 ? LEU A 224 ALA A 239 1 ? 16 HELX_P HELX_P10 AB1 HIS A 251 ? LEU A 260 ? HIS A 252 LEU A 261 1 ? 10 HELX_P HELX_P11 AB2 THR A 271 ? ALA A 289 ? THR A 272 ALA A 290 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A THR 76 C ? ? ? 1_555 A SEP 77 N ? ? A THR 77 A SEP 78 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale2 covale both ? A SEP 77 C ? ? ? 1_555 A LYS 78 N ? ? A SEP 78 A LYS 79 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id TRP _struct_mon_prot_cis.label_seq_id 242 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id TRP _struct_mon_prot_cis.auth_seq_id 243 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 243 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 244 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.89 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 57 ? LYS A 60 ? LEU A 58 LYS A 61 AA1 2 PHE A 80 ? ALA A 84 ? PHE A 81 ALA A 85 AA1 3 ARG A 137 ? SER A 148 ? ARG A 138 SER A 149 AA1 4 ARG A 126 ? TYR A 134 ? ARG A 127 TYR A 135 AA1 5 PHE A 106 ? PHE A 110 ? PHE A 107 PHE A 111 AA2 1 LEU A 57 ? LYS A 60 ? LEU A 58 LYS A 61 AA2 2 PHE A 80 ? ALA A 84 ? PHE A 81 ALA A 85 AA2 3 ARG A 137 ? SER A 148 ? ARG A 138 SER A 149 AA2 4 ARG A 126 ? TYR A 134 ? ARG A 127 TYR A 135 AA2 5 GLU A 114 ? GLU A 115 ? GLU A 115 GLU A 116 AA3 1 ASP A 158 ? LEU A 160 ? ASP A 159 LEU A 161 AA3 2 VAL A 176 ? CYS A 178 ? VAL A 177 CYS A 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 60 ? N LYS A 61 O ASP A 81 ? O ASP A 82 AA1 2 3 N ALA A 84 ? N ALA A 85 O SER A 147 ? O SER A 148 AA1 3 4 O PHE A 139 ? O PHE A 140 N LEU A 132 ? N LEU A 133 AA1 4 5 O LYS A 131 ? O LYS A 132 N ILE A 109 ? N ILE A 110 AA2 1 2 N LYS A 60 ? N LYS A 61 O ASP A 81 ? O ASP A 82 AA2 2 3 N ALA A 84 ? N ALA A 85 O SER A 147 ? O SER A 148 AA2 3 4 O PHE A 139 ? O PHE A 140 N LEU A 132 ? N LEU A 133 AA2 4 5 O ARG A 127 ? O ARG A 128 N GLU A 114 ? N GLU A 115 AA3 1 2 N ASP A 158 ? N ASP A 159 O CYS A 178 ? O CYS A 179 # _atom_sites.entry_id 6Y5U _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010481 _atom_sites.fract_transf_matrix[1][2] 0.006051 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012103 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014487 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 2 ? ? ? A . n A 1 2 LYS 2 3 ? ? ? A . n A 1 3 PRO 3 4 4 PRO PRO A . n A 1 4 TYR 4 5 5 TYR TYR A . n A 1 5 SER 5 6 6 SER SER A . n A 1 6 SER 6 7 7 SER SER A . n A 1 7 PRO 7 8 8 PRO PRO A . n A 1 8 PRO 8 9 9 PRO PRO A . n A 1 9 THR 9 10 10 THR THR A . n A 1 10 ASN 10 11 11 ASN ASN A . n A 1 11 LEU 11 12 12 LEU LEU A . n A 1 12 ARG 12 13 13 ARG ARG A . n A 1 13 SER 13 14 14 SER SER A . n A 1 14 LEU 14 15 15 LEU LEU A . n A 1 15 ARG 15 16 16 ARG ARG A . n A 1 16 ASP 16 17 17 ASP ASP A . n A 1 17 ARG 17 18 18 ARG ARG A . n A 1 18 LEU 18 19 19 LEU LEU A . n A 1 19 THR 19 20 20 THR THR A . n A 1 20 GLN 20 21 21 GLN GLN A . n A 1 21 VAL 21 22 22 VAL VAL A . n A 1 22 ALA 22 23 23 ALA ALA A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 ARG 24 25 25 ARG ARG A . n A 1 25 GLN 25 26 26 GLN GLN A . n A 1 26 GLY 26 27 27 GLY GLY A . n A 1 27 VAL 27 28 28 VAL VAL A . n A 1 28 VAL 28 29 29 VAL VAL A . n A 1 29 PHE 29 30 30 PHE PHE A . n A 1 30 GLY 30 31 31 GLY GLY A . n A 1 31 ARG 31 32 32 ARG ARG A . n A 1 32 LEU 32 33 33 LEU LEU A . n A 1 33 GLN 33 34 34 GLN GLN A . n A 1 34 ARG 34 35 35 ARG ARG A . n A 1 35 HIS 35 36 36 HIS HIS A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 ALA 37 38 38 ALA ALA A . n A 1 38 MET 38 39 39 MET MET A . n A 1 39 ILE 39 40 40 ILE ILE A . n A 1 40 VAL 40 41 41 VAL VAL A . n A 1 41 VAL 41 42 42 VAL VAL A . n A 1 42 ALA 42 43 43 ALA ALA A . n A 1 43 GLN 43 44 44 GLN GLN A . n A 1 44 PHE 44 45 45 PHE PHE A . n A 1 45 ALA 45 46 46 ALA ALA A . n A 1 46 ALA 46 47 47 ALA ALA A . n A 1 47 THR 47 48 48 THR THR A . n A 1 48 LEU 48 49 49 LEU LEU A . n A 1 49 THR 49 50 50 THR THR A . n A 1 50 ASP 50 51 51 ASP ASP A . n A 1 51 ASP 51 52 52 ASP ASP A . n A 1 52 THR 52 53 53 THR THR A . n A 1 53 GLY 53 54 54 GLY GLY A . n A 1 54 ALA 54 55 55 ALA ALA A . n A 1 55 PRO 55 56 56 PRO PRO A . n A 1 56 LEU 56 57 57 LEU LEU A . n A 1 57 LEU 57 58 58 LEU LEU A . n A 1 58 LEU 58 59 59 LEU LEU A . n A 1 59 VAL 59 60 60 VAL VAL A . n A 1 60 LYS 60 61 61 LYS LYS A . n A 1 61 GLY 61 62 62 GLY GLY A . n A 1 62 GLY 62 63 63 GLY GLY A . n A 1 63 SER 63 64 64 SER SER A . n A 1 64 SER 64 65 65 SER SER A . n A 1 65 LEU 65 66 66 LEU LEU A . n A 1 66 GLU 66 67 67 GLU GLU A . n A 1 67 LEU 67 68 68 LEU LEU A . n A 1 68 ARG 68 69 69 ARG ARG A . n A 1 69 ARG 69 70 70 ARG ARG A . n A 1 70 GLY 70 71 71 GLY GLY A . n A 1 71 ILE 71 72 72 ILE ILE A . n A 1 72 PRO 72 73 73 PRO PRO A . n A 1 73 ASP 73 74 74 ASP ASP A . n A 1 74 SER 74 75 75 SER SER A . n A 1 75 ARG 75 76 76 ARG ARG A . n A 1 76 THR 76 77 77 THR THR A . n A 1 77 SEP 77 78 78 SEP SEP A . n A 1 78 LYS 78 79 79 LYS LYS A . n A 1 79 ASP 79 80 80 ASP ASP A . n A 1 80 PHE 80 81 81 PHE PHE A . n A 1 81 ASP 81 82 82 ASP ASP A . n A 1 82 THR 82 83 83 THR THR A . n A 1 83 VAL 83 84 84 VAL VAL A . n A 1 84 ALA 84 85 85 ALA ALA A . n A 1 85 ARG 85 86 86 ARG ARG A . n A 1 86 ARG 86 87 87 ARG ARG A . n A 1 87 ASP 87 88 88 ASP ASP A . n A 1 88 ILE 88 89 89 ILE ILE A . n A 1 89 GLU 89 90 90 GLU GLU A . n A 1 90 LEU 90 91 91 LEU LEU A . n A 1 91 ILE 91 92 92 ILE ILE A . n A 1 92 HIS 92 93 93 HIS HIS A . n A 1 93 GLU 93 94 94 GLU GLU A . n A 1 94 GLN 94 95 95 GLN GLN A . n A 1 95 LEU 95 96 96 LEU LEU A . n A 1 96 ALA 96 97 97 ALA ALA A . n A 1 97 ASP 97 98 98 ASP ASP A . n A 1 98 ALA 98 99 99 ALA ALA A . n A 1 99 GLY 99 100 100 GLY GLY A . n A 1 100 GLU 100 101 101 GLU GLU A . n A 1 101 THR 101 102 102 THR THR A . n A 1 102 GLY 102 103 103 GLY GLY A . n A 1 103 TRP 103 104 104 TRP TRP A . n A 1 104 GLU 104 105 105 GLU GLU A . n A 1 105 GLY 105 106 106 GLY GLY A . n A 1 106 PHE 106 107 107 PHE PHE A . n A 1 107 THR 107 108 108 THR THR A . n A 1 108 ALA 108 109 109 ALA ALA A . n A 1 109 ILE 109 110 110 ILE ILE A . n A 1 110 PHE 110 111 111 PHE PHE A . n A 1 111 THR 111 112 112 THR THR A . n A 1 112 ALA 112 113 113 ALA ALA A . n A 1 113 PRO 113 114 114 PRO PRO A . n A 1 114 GLU 114 115 115 GLU GLU A . n A 1 115 GLU 115 116 116 GLU GLU A . n A 1 116 ILE 116 117 117 ILE ILE A . n A 1 117 ASP 117 118 118 ASP ASP A . n A 1 118 VAL 118 119 119 VAL VAL A . n A 1 119 PRO 119 120 120 PRO PRO A . n A 1 120 GLY 120 121 121 GLY GLY A . n A 1 121 MET 121 122 122 MET MET A . n A 1 122 PRO 122 123 123 PRO PRO A . n A 1 123 VAL 123 124 124 VAL VAL A . n A 1 124 LYS 124 125 125 LYS LYS A . n A 1 125 PRO 125 126 126 PRO PRO A . n A 1 126 ARG 126 127 127 ARG ARG A . n A 1 127 ARG 127 128 128 ARG ARG A . n A 1 128 PHE 128 129 129 PHE PHE A . n A 1 129 THR 129 130 130 THR THR A . n A 1 130 ALA 130 131 131 ALA ALA A . n A 1 131 LYS 131 132 132 LYS LYS A . n A 1 132 LEU 132 133 133 LEU LEU A . n A 1 133 SER 133 134 134 SER SER A . n A 1 134 TYR 134 135 135 TYR TYR A . n A 1 135 ARG 135 136 136 ARG ARG A . n A 1 136 GLY 136 137 137 GLY GLY A . n A 1 137 ARG 137 138 138 ARG ARG A . n A 1 138 ALA 138 139 139 ALA ALA A . n A 1 139 PHE 139 140 140 PHE PHE A . n A 1 140 ALA 140 141 141 ALA ALA A . n A 1 141 THR 141 142 142 THR THR A . n A 1 142 VAL 142 143 143 VAL VAL A . n A 1 143 PRO 143 144 144 PRO PRO A . n A 1 144 ILE 144 145 145 ILE ILE A . n A 1 145 GLU 145 146 146 GLU GLU A . n A 1 146 VAL 146 147 147 VAL VAL A . n A 1 147 SER 147 148 148 SER SER A . n A 1 148 SER 148 149 149 SER SER A . n A 1 149 VAL 149 150 150 VAL VAL A . n A 1 150 GLU 150 151 151 GLU GLU A . n A 1 151 ALA 151 152 152 ALA ALA A . n A 1 152 GLY 152 153 153 GLY GLY A . n A 1 153 ASN 153 154 154 ASN ASN A . n A 1 154 ALA 154 155 155 ALA ALA A . n A 1 155 ASP 155 156 156 ASP ASP A . n A 1 156 GLN 156 157 157 GLN GLN A . n A 1 157 PHE 157 158 158 PHE PHE A . n A 1 158 ASP 158 159 159 ASP ASP A . n A 1 159 THR 159 160 160 THR THR A . n A 1 160 LEU 160 161 161 LEU LEU A . n A 1 161 THR 161 162 162 THR THR A . n A 1 162 SER 162 163 163 SER SER A . n A 1 163 ASP 163 164 164 ASP ASP A . n A 1 164 ALA 164 165 165 ALA ALA A . n A 1 165 LEU 165 166 166 LEU LEU A . n A 1 166 GLY 166 167 167 GLY GLY A . n A 1 167 LEU 167 168 168 LEU LEU A . n A 1 168 VAL 168 169 169 VAL VAL A . n A 1 169 GLY 169 170 170 GLY GLY A . n A 1 170 VAL 170 171 171 VAL VAL A . n A 1 171 PRO 171 172 172 PRO PRO A . n A 1 172 ALA 172 173 173 ALA ALA A . n A 1 173 ALA 173 174 174 ALA ALA A . n A 1 174 VAL 174 175 175 VAL VAL A . n A 1 175 ALA 175 176 176 ALA ALA A . n A 1 176 VAL 176 177 177 VAL VAL A . n A 1 177 PRO 177 178 178 PRO PRO A . n A 1 178 CYS 178 179 179 CYS CYS A . n A 1 179 MET 179 180 180 MET MET A . n A 1 180 THR 180 181 181 THR THR A . n A 1 181 ILE 181 182 182 ILE ILE A . n A 1 182 PRO 182 183 183 PRO PRO A . n A 1 183 TRP 183 184 184 TRP TRP A . n A 1 184 GLN 184 185 185 GLN GLN A . n A 1 185 ILE 185 186 186 ILE ILE A . n A 1 186 ALA 186 187 187 ALA ALA A . n A 1 187 GLN 187 188 188 GLN GLN A . n A 1 188 LYS 188 189 189 LYS LYS A . n A 1 189 LEU 189 190 190 LEU LEU A . n A 1 190 HIS 190 191 191 HIS HIS A . n A 1 191 ALA 191 192 192 ALA ALA A . n A 1 192 VAL 192 193 193 VAL VAL A . n A 1 193 THR 193 194 194 THR THR A . n A 1 194 ALA 194 195 195 ALA ALA A . n A 1 195 VAL 195 196 196 VAL VAL A . n A 1 196 LEU 196 197 197 LEU LEU A . n A 1 197 GLU 197 198 198 GLU GLU A . n A 1 198 GLU 198 199 199 GLU GLU A . n A 1 199 PRO 199 200 200 PRO PRO A . n A 1 200 LYS 200 201 201 LYS LYS A . n A 1 201 VAL 201 202 202 VAL VAL A . n A 1 202 ASN 202 203 203 ASN ASN A . n A 1 203 ASP 203 204 204 ASP ASP A . n A 1 204 ARG 204 205 205 ARG ARG A . n A 1 205 ALA 205 206 206 ALA ALA A . n A 1 206 HIS 206 207 207 HIS HIS A . n A 1 207 ASP 207 208 208 ASP ASP A . n A 1 208 LEU 208 209 209 LEU LEU A . n A 1 209 VAL 209 210 210 VAL VAL A . n A 1 210 ASP 210 211 211 ASP ASP A . n A 1 211 LEU 211 212 212 LEU LEU A . n A 1 212 GLN 212 213 213 GLN GLN A . n A 1 213 LEU 213 214 214 LEU LEU A . n A 1 214 LEU 214 215 215 LEU LEU A . n A 1 215 GLU 215 216 216 GLU GLU A . n A 1 216 GLY 216 217 217 GLY GLY A . n A 1 217 LEU 217 218 218 LEU LEU A . n A 1 218 LEU 218 219 219 LEU LEU A . n A 1 219 LEU 219 220 220 LEU LEU A . n A 1 220 ASP 220 221 221 ASP ASP A . n A 1 221 ALA 221 222 222 ALA ALA A . n A 1 222 ASP 222 223 223 ASP ASP A . n A 1 223 LEU 223 224 224 LEU LEU A . n A 1 224 MET 224 225 225 MET MET A . n A 1 225 PRO 225 226 226 PRO PRO A . n A 1 226 THR 226 227 227 THR THR A . n A 1 227 ARG 227 228 228 ARG ARG A . n A 1 228 SER 228 229 229 SER SER A . n A 1 229 ALA 229 230 230 ALA ALA A . n A 1 230 CYS 230 231 231 CYS CYS A . n A 1 231 ILE 231 232 232 ILE ILE A . n A 1 232 ALA 232 233 233 ALA ALA A . n A 1 233 ILE 233 234 234 ILE ILE A . n A 1 234 PHE 234 235 235 PHE PHE A . n A 1 235 GLU 235 236 236 GLU GLU A . n A 1 236 ALA 236 237 237 ALA ALA A . n A 1 237 ARG 237 238 238 ARG ARG A . n A 1 238 ALA 238 239 239 ALA ALA A . n A 1 239 GLN 239 240 240 GLN GLN A . n A 1 240 HIS 240 241 241 HIS HIS A . n A 1 241 PRO 241 242 242 PRO PRO A . n A 1 242 TRP 242 243 243 TRP TRP A . n A 1 243 PRO 243 244 244 PRO PRO A . n A 1 244 PRO 244 245 245 PRO PRO A . n A 1 245 ARG 245 246 246 ARG ARG A . n A 1 246 VAL 246 247 247 VAL VAL A . n A 1 247 ALA 247 248 248 ALA ALA A . n A 1 248 THR 248 249 249 THR THR A . n A 1 249 LEU 249 250 250 LEU LEU A . n A 1 250 PRO 250 251 251 PRO PRO A . n A 1 251 HIS 251 252 252 HIS HIS A . n A 1 252 TRP 252 253 253 TRP TRP A . n A 1 253 PRO 253 254 254 PRO PRO A . n A 1 254 LEU 254 255 255 LEU LEU A . n A 1 255 ILE 255 256 256 ILE ILE A . n A 1 256 TYR 256 257 257 TYR TYR A . n A 1 257 ALA 257 258 258 ALA ALA A . n A 1 258 GLY 258 259 259 GLY GLY A . n A 1 259 ALA 259 260 260 ALA ALA A . n A 1 260 LEU 260 261 261 LEU LEU A . n A 1 261 GLU 261 262 262 GLU GLU A . n A 1 262 GLY 262 263 263 GLY GLY A . n A 1 263 LEU 263 264 264 LEU LEU A . n A 1 264 ASP 264 265 265 ASP ASP A . n A 1 265 HIS 265 266 266 HIS HIS A . n A 1 266 LEU 266 267 267 LEU LEU A . n A 1 267 GLU 267 268 268 GLU GLU A . n A 1 268 LEU 268 269 269 LEU LEU A . n A 1 269 ALA 269 270 270 ALA ALA A . n A 1 270 ARG 270 271 271 ARG ARG A . n A 1 271 THR 271 272 272 THR THR A . n A 1 272 VAL 272 273 273 VAL VAL A . n A 1 273 ASP 273 274 274 ASP ASP A . n A 1 274 ALA 274 275 275 ALA ALA A . n A 1 275 ALA 275 276 276 ALA ALA A . n A 1 276 ALA 276 277 277 ALA ALA A . n A 1 277 GLN 277 278 278 GLN GLN A . n A 1 278 ALA 278 279 279 ALA ALA A . n A 1 279 VAL 279 280 280 VAL VAL A . n A 1 280 GLN 280 281 281 GLN GLN A . n A 1 281 ARG 281 282 282 ARG ARG A . n A 1 282 PHE 282 283 283 PHE PHE A . n A 1 283 VAL 283 284 284 VAL VAL A . n A 1 284 ALA 284 285 285 ALA ALA A . n A 1 285 ARG 285 286 286 ARG ARG A . n A 1 286 ILE 286 287 287 ILE ILE A . n A 1 287 ASP 287 288 288 ASP ASP A . n A 1 288 ARG 288 289 289 ARG ARG A . n A 1 289 ALA 289 290 290 ALA ALA A . n A 1 290 THR 290 291 291 THR THR A . n A 1 291 LYS 291 292 ? ? ? A . n A 1 292 ARG 292 293 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 277 HOH HOH A . B 2 HOH 2 302 254 HOH HOH A . B 2 HOH 3 303 255 HOH HOH A . B 2 HOH 4 304 229 HOH HOH A . B 2 HOH 5 305 16 HOH HOH A . B 2 HOH 6 306 252 HOH HOH A . B 2 HOH 7 307 129 HOH HOH A . B 2 HOH 8 308 65 HOH HOH A . B 2 HOH 9 309 142 HOH HOH A . B 2 HOH 10 310 123 HOH HOH A . B 2 HOH 11 311 213 HOH HOH A . B 2 HOH 12 312 276 HOH HOH A . B 2 HOH 13 313 174 HOH HOH A . B 2 HOH 14 314 140 HOH HOH A . B 2 HOH 15 315 9 HOH HOH A . B 2 HOH 16 316 155 HOH HOH A . B 2 HOH 17 317 233 HOH HOH A . B 2 HOH 18 318 1 HOH HOH A . B 2 HOH 19 319 49 HOH HOH A . B 2 HOH 20 320 152 HOH HOH A . B 2 HOH 21 321 203 HOH HOH A . B 2 HOH 22 322 58 HOH HOH A . B 2 HOH 23 323 266 HOH HOH A . B 2 HOH 24 324 61 HOH HOH A . B 2 HOH 25 325 71 HOH HOH A . B 2 HOH 26 326 156 HOH HOH A . B 2 HOH 27 327 117 HOH HOH A . B 2 HOH 28 328 7 HOH HOH A . B 2 HOH 29 329 32 HOH HOH A . B 2 HOH 30 330 34 HOH HOH A . B 2 HOH 31 331 172 HOH HOH A . B 2 HOH 32 332 88 HOH HOH A . B 2 HOH 33 333 13 HOH HOH A . B 2 HOH 34 334 93 HOH HOH A . B 2 HOH 35 335 247 HOH HOH A . B 2 HOH 36 336 25 HOH HOH A . B 2 HOH 37 337 106 HOH HOH A . B 2 HOH 38 338 91 HOH HOH A . B 2 HOH 39 339 66 HOH HOH A . B 2 HOH 40 340 143 HOH HOH A . B 2 HOH 41 341 33 HOH HOH A . B 2 HOH 42 342 207 HOH HOH A . B 2 HOH 43 343 136 HOH HOH A . B 2 HOH 44 344 113 HOH HOH A . B 2 HOH 45 345 8 HOH HOH A . B 2 HOH 46 346 42 HOH HOH A . B 2 HOH 47 347 128 HOH HOH A . B 2 HOH 48 348 69 HOH HOH A . B 2 HOH 49 349 52 HOH HOH A . B 2 HOH 50 350 92 HOH HOH A . B 2 HOH 51 351 256 HOH HOH A . B 2 HOH 52 352 30 HOH HOH A . B 2 HOH 53 353 11 HOH HOH A . B 2 HOH 54 354 38 HOH HOH A . B 2 HOH 55 355 126 HOH HOH A . B 2 HOH 56 356 4 HOH HOH A . B 2 HOH 57 357 118 HOH HOH A . B 2 HOH 58 358 225 HOH HOH A . B 2 HOH 59 359 160 HOH HOH A . B 2 HOH 60 360 170 HOH HOH A . B 2 HOH 61 361 161 HOH HOH A . B 2 HOH 62 362 70 HOH HOH A . B 2 HOH 63 363 179 HOH HOH A . B 2 HOH 64 364 104 HOH HOH A . B 2 HOH 65 365 86 HOH HOH A . B 2 HOH 66 366 250 HOH HOH A . B 2 HOH 67 367 82 HOH HOH A . B 2 HOH 68 368 80 HOH HOH A . B 2 HOH 69 369 50 HOH HOH A . B 2 HOH 70 370 97 HOH HOH A . B 2 HOH 71 371 199 HOH HOH A . B 2 HOH 72 372 89 HOH HOH A . B 2 HOH 73 373 198 HOH HOH A . B 2 HOH 74 374 60 HOH HOH A . B 2 HOH 75 375 51 HOH HOH A . B 2 HOH 76 376 12 HOH HOH A . B 2 HOH 77 377 75 HOH HOH A . B 2 HOH 78 378 96 HOH HOH A . B 2 HOH 79 379 127 HOH HOH A . B 2 HOH 80 380 146 HOH HOH A . B 2 HOH 81 381 95 HOH HOH A . B 2 HOH 82 382 105 HOH HOH A . B 2 HOH 83 383 159 HOH HOH A . B 2 HOH 84 384 81 HOH HOH A . B 2 HOH 85 385 74 HOH HOH A . B 2 HOH 86 386 206 HOH HOH A . B 2 HOH 87 387 18 HOH HOH A . B 2 HOH 88 388 202 HOH HOH A . B 2 HOH 89 389 122 HOH HOH A . B 2 HOH 90 390 14 HOH HOH A . B 2 HOH 91 391 31 HOH HOH A . B 2 HOH 92 392 26 HOH HOH A . B 2 HOH 93 393 20 HOH HOH A . B 2 HOH 94 394 234 HOH HOH A . B 2 HOH 95 395 90 HOH HOH A . B 2 HOH 96 396 73 HOH HOH A . B 2 HOH 97 397 98 HOH HOH A . B 2 HOH 98 398 107 HOH HOH A . B 2 HOH 99 399 2 HOH HOH A . B 2 HOH 100 400 242 HOH HOH A . B 2 HOH 101 401 67 HOH HOH A . B 2 HOH 102 402 148 HOH HOH A . B 2 HOH 103 403 215 HOH HOH A . B 2 HOH 104 404 182 HOH HOH A . B 2 HOH 105 405 135 HOH HOH A . B 2 HOH 106 406 72 HOH HOH A . B 2 HOH 107 407 15 HOH HOH A . B 2 HOH 108 408 210 HOH HOH A . B 2 HOH 109 409 168 HOH HOH A . B 2 HOH 110 410 158 HOH HOH A . B 2 HOH 111 411 76 HOH HOH A . B 2 HOH 112 412 43 HOH HOH A . B 2 HOH 113 413 5 HOH HOH A . B 2 HOH 114 414 209 HOH HOH A . B 2 HOH 115 415 46 HOH HOH A . B 2 HOH 116 416 19 HOH HOH A . B 2 HOH 117 417 21 HOH HOH A . B 2 HOH 118 418 154 HOH HOH A . B 2 HOH 119 419 22 HOH HOH A . B 2 HOH 120 420 64 HOH HOH A . B 2 HOH 121 421 109 HOH HOH A . B 2 HOH 122 422 193 HOH HOH A . B 2 HOH 123 423 62 HOH HOH A . B 2 HOH 124 424 17 HOH HOH A . B 2 HOH 125 425 116 HOH HOH A . B 2 HOH 126 426 241 HOH HOH A . B 2 HOH 127 427 35 HOH HOH A . B 2 HOH 128 428 28 HOH HOH A . B 2 HOH 129 429 181 HOH HOH A . B 2 HOH 130 430 208 HOH HOH A . B 2 HOH 131 431 84 HOH HOH A . B 2 HOH 132 432 261 HOH HOH A . B 2 HOH 133 433 48 HOH HOH A . B 2 HOH 134 434 79 HOH HOH A . B 2 HOH 135 435 36 HOH HOH A . B 2 HOH 136 436 227 HOH HOH A . B 2 HOH 137 437 78 HOH HOH A . B 2 HOH 138 438 3 HOH HOH A . B 2 HOH 139 439 40 HOH HOH A . B 2 HOH 140 440 108 HOH HOH A . B 2 HOH 141 441 264 HOH HOH A . B 2 HOH 142 442 110 HOH HOH A . B 2 HOH 143 443 41 HOH HOH A . B 2 HOH 144 444 29 HOH HOH A . B 2 HOH 145 445 6 HOH HOH A . B 2 HOH 146 446 188 HOH HOH A . B 2 HOH 147 447 260 HOH HOH A . B 2 HOH 148 448 145 HOH HOH A . B 2 HOH 149 449 173 HOH HOH A . B 2 HOH 150 450 59 HOH HOH A . B 2 HOH 151 451 63 HOH HOH A . B 2 HOH 152 452 267 HOH HOH A . B 2 HOH 153 453 24 HOH HOH A . B 2 HOH 154 454 195 HOH HOH A . B 2 HOH 155 455 44 HOH HOH A . B 2 HOH 156 456 115 HOH HOH A . B 2 HOH 157 457 201 HOH HOH A . B 2 HOH 158 458 68 HOH HOH A . B 2 HOH 159 459 270 HOH HOH A . B 2 HOH 160 460 45 HOH HOH A . B 2 HOH 161 461 167 HOH HOH A . B 2 HOH 162 462 240 HOH HOH A . B 2 HOH 163 463 280 HOH HOH A . B 2 HOH 164 464 274 HOH HOH A . B 2 HOH 165 465 57 HOH HOH A . B 2 HOH 166 466 27 HOH HOH A . B 2 HOH 167 467 56 HOH HOH A . B 2 HOH 168 468 151 HOH HOH A . B 2 HOH 169 469 103 HOH HOH A . B 2 HOH 170 470 54 HOH HOH A . B 2 HOH 171 471 10 HOH HOH A . B 2 HOH 172 472 101 HOH HOH A . B 2 HOH 173 473 244 HOH HOH A . B 2 HOH 174 474 149 HOH HOH A . B 2 HOH 175 475 243 HOH HOH A . B 2 HOH 176 476 119 HOH HOH A . B 2 HOH 177 477 186 HOH HOH A . B 2 HOH 178 478 165 HOH HOH A . B 2 HOH 179 479 187 HOH HOH A . B 2 HOH 180 480 245 HOH HOH A . B 2 HOH 181 481 263 HOH HOH A . B 2 HOH 182 482 153 HOH HOH A . B 2 HOH 183 483 281 HOH HOH A . B 2 HOH 184 484 211 HOH HOH A . B 2 HOH 185 485 144 HOH HOH A . B 2 HOH 186 486 253 HOH HOH A . B 2 HOH 187 487 192 HOH HOH A . B 2 HOH 188 488 197 HOH HOH A . B 2 HOH 189 489 121 HOH HOH A . B 2 HOH 190 490 83 HOH HOH A . B 2 HOH 191 491 137 HOH HOH A . B 2 HOH 192 492 236 HOH HOH A . B 2 HOH 193 493 212 HOH HOH A . B 2 HOH 194 494 157 HOH HOH A . B 2 HOH 195 495 85 HOH HOH A . B 2 HOH 196 496 178 HOH HOH A . B 2 HOH 197 497 271 HOH HOH A . B 2 HOH 198 498 164 HOH HOH A . B 2 HOH 199 499 269 HOH HOH A . B 2 HOH 200 500 132 HOH HOH A . B 2 HOH 201 501 124 HOH HOH A . B 2 HOH 202 502 196 HOH HOH A . B 2 HOH 203 503 258 HOH HOH A . B 2 HOH 204 504 190 HOH HOH A . B 2 HOH 205 505 47 HOH HOH A . B 2 HOH 206 506 248 HOH HOH A . B 2 HOH 207 507 87 HOH HOH A . B 2 HOH 208 508 171 HOH HOH A . B 2 HOH 209 509 194 HOH HOH A . B 2 HOH 210 510 53 HOH HOH A . B 2 HOH 211 511 220 HOH HOH A . B 2 HOH 212 512 279 HOH HOH A . B 2 HOH 213 513 94 HOH HOH A . B 2 HOH 214 514 102 HOH HOH A . B 2 HOH 215 515 112 HOH HOH A . B 2 HOH 216 516 183 HOH HOH A . B 2 HOH 217 517 262 HOH HOH A . B 2 HOH 218 518 218 HOH HOH A . B 2 HOH 219 519 125 HOH HOH A . B 2 HOH 220 520 185 HOH HOH A . B 2 HOH 221 521 235 HOH HOH A . B 2 HOH 222 522 246 HOH HOH A . B 2 HOH 223 523 223 HOH HOH A . B 2 HOH 224 524 141 HOH HOH A . B 2 HOH 225 525 175 HOH HOH A . B 2 HOH 226 526 77 HOH HOH A . B 2 HOH 227 527 138 HOH HOH A . B 2 HOH 228 528 120 HOH HOH A . B 2 HOH 229 529 216 HOH HOH A . B 2 HOH 230 530 169 HOH HOH A . B 2 HOH 231 531 228 HOH HOH A . B 2 HOH 232 532 257 HOH HOH A . B 2 HOH 233 533 177 HOH HOH A . B 2 HOH 234 534 176 HOH HOH A . B 2 HOH 235 535 251 HOH HOH A . B 2 HOH 236 536 130 HOH HOH A . B 2 HOH 237 537 39 HOH HOH A . B 2 HOH 238 538 217 HOH HOH A . B 2 HOH 239 539 278 HOH HOH A . B 2 HOH 240 540 226 HOH HOH A . B 2 HOH 241 541 111 HOH HOH A . B 2 HOH 242 542 204 HOH HOH A . B 2 HOH 243 543 219 HOH HOH A . B 2 HOH 244 544 224 HOH HOH A . B 2 HOH 245 545 273 HOH HOH A . B 2 HOH 246 546 238 HOH HOH A . B 2 HOH 247 547 222 HOH HOH A . B 2 HOH 248 548 163 HOH HOH A . B 2 HOH 249 549 200 HOH HOH A . B 2 HOH 250 550 232 HOH HOH A . B 2 HOH 251 551 131 HOH HOH A . B 2 HOH 252 552 259 HOH HOH A . B 2 HOH 253 553 133 HOH HOH A . B 2 HOH 254 554 139 HOH HOH A . B 2 HOH 255 555 99 HOH HOH A . B 2 HOH 256 556 134 HOH HOH A . B 2 HOH 257 557 230 HOH HOH A . B 2 HOH 258 558 150 HOH HOH A . B 2 HOH 259 559 221 HOH HOH A . B 2 HOH 260 560 114 HOH HOH A . B 2 HOH 261 561 237 HOH HOH A . B 2 HOH 262 562 249 HOH HOH A . B 2 HOH 263 563 272 HOH HOH A . B 2 HOH 264 564 189 HOH HOH A . B 2 HOH 265 565 239 HOH HOH A . B 2 HOH 266 566 55 HOH HOH A . B 2 HOH 267 567 166 HOH HOH A . B 2 HOH 268 568 180 HOH HOH A . B 2 HOH 269 569 275 HOH HOH A . B 2 HOH 270 570 37 HOH HOH A . B 2 HOH 271 571 100 HOH HOH A . B 2 HOH 272 572 205 HOH HOH A . B 2 HOH 273 573 191 HOH HOH A . B 2 HOH 274 574 214 HOH HOH A . B 2 HOH 275 575 268 HOH HOH A . B 2 HOH 276 576 162 HOH HOH A . B 2 HOH 277 577 265 HOH HOH A . B 2 HOH 278 578 23 HOH HOH A . B 2 HOH 279 579 231 HOH HOH A . B 2 HOH 280 580 184 HOH HOH A . B 2 HOH 281 581 147 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id SEP _pdbx_struct_mod_residue.label_seq_id 77 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id SEP _pdbx_struct_mod_residue.auth_seq_id 78 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id SER _pdbx_struct_mod_residue.details 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 13520 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-09-16 2 'Structure model' 1 1 2020-09-23 3 'Structure model' 1 2 2020-09-30 4 'Structure model' 1 3 2021-01-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' struct # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.page_first' 5 3 'Structure model' '_citation.page_last' 6 3 'Structure model' '_citation.title' 7 3 'Structure model' '_citation_author.identifier_ORCID' 8 4 'Structure model' '_struct.title' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXD ? ? ? . 5 # _pdbx_entry_details.entry_id 6Y5U _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 87 ? ? -151.46 -39.11 2 1 ILE A 89 ? ? -118.59 -93.72 3 1 ALA A 152 ? ? 48.83 -127.60 4 1 GLU A 199 ? ? -22.64 -56.64 5 1 ARG A 205 ? ? -83.29 41.53 6 1 LEU A 220 ? ? 55.23 -129.45 7 1 GLN A 240 ? ? -112.90 -112.81 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 2 ? A THR 1 2 1 Y 1 A LYS 3 ? A LYS 2 3 1 Y 1 A LYS 292 ? A LYS 291 4 1 Y 1 A ARG 293 ? A ARG 292 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 32 2 1' _space_group.name_Hall ;P 32 2" ; _space_group.IT_number 154 _space_group.crystal_system trigonal _space_group.id 1 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+2/3 3 -x+y,-x,z+1/3 4 x-y,-y,-z+1/3 5 -x,-x+y,-z+2/3 6 y,x,-z #