HEADER LYASE 28-FEB-20 6Y74 TITLE X-RAY CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE IX CATALYTIC TITLE 2 DOMAIN. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CARBONIC ANHYDRASE 9; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CARBONATE DEHYDRATASE IX,CARBONIC ANHYDRASE IX,CAIX,MEMBRANE COMPND 5 ANTIGEN MN,P54/58N,RENAL CELL CARCINOMA-ASSOCIATED ANTIGEN G250,RCC- COMPND 6 ASSOCIATED ANTIGEN G250,PMW1; COMPND 7 EC: 4.2.1.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CA9, G250, MN; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA AFF. FRUGIPERDA 1 BOLD-2017; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 2449148; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: BAC-TO-BAC KEYWDS CARBONIC ANHYDRASE, PROTON TRANSFER, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.Z.FISHER,K.KORUZA REVDAT 2 24-JAN-24 6Y74 1 REMARK REVDAT 1 05-AUG-20 6Y74 0 JRNL AUTH K.KORUZA,A.B.MURRAY,B.P.MAHON,J.B.HOPKINS,W.KNECHT, JRNL AUTH 2 R.MCKENNA,S.Z.FISHER JRNL TITL BIOPHYSICAL CHARACTERIZATION OF CANCER-RELATED CARBONIC JRNL TITL 2 ANHYDRASE IX JRNL REF INT J MOL SCI V. 21 5277 2020 JRNL REFN ESSN 1422-0067 JRNL DOI 10.3390/IJMS21155277 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 75594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1300 - 4.5400 1.00 2896 135 0.1716 0.1880 REMARK 3 2 4.5400 - 3.6000 1.00 2831 158 0.1435 0.1550 REMARK 3 3 3.6000 - 3.1500 1.00 2843 144 0.1576 0.1913 REMARK 3 4 3.1500 - 2.8600 1.00 2790 155 0.1745 0.1937 REMARK 3 5 2.8600 - 2.6600 1.00 2762 182 0.1803 0.1966 REMARK 3 6 2.6600 - 2.5000 1.00 2836 150 0.1774 0.1907 REMARK 3 7 2.5000 - 2.3700 1.00 2781 140 0.1763 0.2142 REMARK 3 8 2.3700 - 2.2700 0.99 2830 144 0.1728 0.2002 REMARK 3 9 2.2700 - 2.1800 1.00 2777 162 0.1676 0.1968 REMARK 3 10 2.1800 - 2.1100 0.99 2764 157 0.1641 0.1715 REMARK 3 11 2.1100 - 2.0400 0.99 2755 163 0.1650 0.2094 REMARK 3 12 2.0400 - 1.9800 0.99 2780 156 0.1655 0.1796 REMARK 3 13 1.9800 - 1.9300 0.99 2794 129 0.1661 0.2221 REMARK 3 14 1.9300 - 1.8800 0.99 2785 153 0.1878 0.2260 REMARK 3 15 1.8800 - 1.8400 0.99 2790 121 0.1908 0.2066 REMARK 3 16 1.8400 - 1.8000 0.99 2779 128 0.1840 0.2094 REMARK 3 17 1.8000 - 1.7700 0.99 2801 123 0.1827 0.2341 REMARK 3 18 1.7700 - 1.7300 0.99 2722 147 0.1856 0.2130 REMARK 3 19 1.7300 - 1.7000 0.99 2757 163 0.1838 0.2333 REMARK 3 20 1.7000 - 1.6700 0.98 2763 154 0.1884 0.2426 REMARK 3 21 1.6700 - 1.6500 0.98 2699 136 0.2009 0.2666 REMARK 3 22 1.6500 - 1.6200 0.98 2783 144 0.2148 0.2402 REMARK 3 23 1.6200 - 1.6000 0.98 2797 104 0.2159 0.2717 REMARK 3 24 1.6000 - 1.5700 0.98 2711 135 0.2262 0.2804 REMARK 3 25 1.5700 - 1.5500 0.94 2691 116 0.2573 0.2655 REMARK 3 26 1.5500 - 1.5300 0.84 2374 104 0.2702 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6Y74 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1292106999. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX IV REMARK 200 BEAMLINE : BIOMAX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75610 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 37.130 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.81500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3IAI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG 6000, 1.4 M SODIUM CITRATE PH REMARK 280 4.3, 1 M LICL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 56.96500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.17000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 56.96500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.17000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 151 O HOH A 601 1.91 REMARK 500 OE1 GLU A 264 O HOH A 602 1.96 REMARK 500 O HOH B 611 O HOH B 670 2.12 REMARK 500 O HOH A 866 O HOH A 872 2.13 REMARK 500 OE2 GLU A 285 O HOH A 603 2.13 REMARK 500 NH1 ARG A 268 O HOH A 604 2.15 REMARK 500 O PRO A 366 O HOH A 605 2.17 REMARK 500 O HOH A 798 O HOH A 876 2.19 REMARK 500 NH2 ARG A 159 O HOH A 606 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 181 N GLU B 181 CA 0.135 REMARK 500 GLU B 181 CA GLU B 181 C 0.185 REMARK 500 HIS B 200 CA HIS B 200 C 0.165 REMARK 500 GLY B 215 C PRO B 216 N -0.151 REMARK 500 LYS B 354 CA LYS B 354 C 0.173 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 178 N - CA - C ANGL. DEV. = 17.5 DEGREES REMARK 500 ARG A 268 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 GLU B 181 C - N - CA ANGL. DEV. = -15.1 DEGREES REMARK 500 HIS B 200 N - CA - C ANGL. DEV. = 16.9 DEGREES REMARK 500 HIS B 200 CA - C - N ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG B 218 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 LYS B 354 CB - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 LYS B 354 CB - CA - C ANGL. DEV. = -16.2 DEGREES REMARK 500 LYS B 354 CA - C - N ANGL. DEV. = -14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 139 21.03 -142.37 REMARK 500 SER A 201 -179.75 -176.94 REMARK 500 ALA A 232 116.42 -34.48 REMARK 500 SER B 139 39.14 -88.30 REMARK 500 SER B 201 -179.34 -173.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS B 354 -22.21 REMARK 500 LYS B 354 -22.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 881 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH B 882 DISTANCE = 6.18 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 504 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 226 NE2 REMARK 620 2 HIS A 228 NE2 102.8 REMARK 620 3 HIS A 251 ND1 114.0 96.6 REMARK 620 4 ACT A 507 O 113.0 105.8 121.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 226 NE2 REMARK 620 2 HIS B 228 NE2 104.7 REMARK 620 3 HIS B 251 ND1 113.4 93.7 REMARK 620 4 ACT B 505 OXT 110.6 109.1 122.4 REMARK 620 N 1 2 3 DBREF 6Y74 A 137 394 UNP Q16790 CAH9_HUMAN 137 394 DBREF 6Y74 B 137 394 UNP Q16790 CAH9_HUMAN 137 394 SEQRES 1 A 258 ASP GLN SER HIS TRP ARG TYR GLY GLY ASP PRO PRO TRP SEQRES 2 A 258 PRO ARG VAL SER PRO ALA CYS ALA GLY ARG PHE GLN SER SEQRES 3 A 258 PRO VAL ASP ILE ARG PRO GLN LEU ALA ALA PHE CYS PRO SEQRES 4 A 258 ALA LEU ARG PRO LEU GLU LEU LEU GLY PHE GLN LEU PRO SEQRES 5 A 258 PRO LEU PRO GLU LEU ARG LEU ARG ASN ASN GLY HIS SER SEQRES 6 A 258 VAL GLN LEU THR LEU PRO PRO GLY LEU GLU MET ALA LEU SEQRES 7 A 258 GLY PRO GLY ARG GLU TYR ARG ALA LEU GLN LEU HIS LEU SEQRES 8 A 258 HIS TRP GLY ALA ALA GLY ARG PRO GLY SER GLU HIS THR SEQRES 9 A 258 VAL GLU GLY HIS ARG PHE PRO ALA GLU ILE HIS VAL VAL SEQRES 10 A 258 HIS LEU SER THR ALA PHE ALA ARG VAL ASP GLU ALA LEU SEQRES 11 A 258 GLY ARG PRO GLY GLY LEU ALA VAL LEU ALA ALA PHE LEU SEQRES 12 A 258 GLU GLU GLY PRO GLU GLU ASN SER ALA TYR GLU GLN LEU SEQRES 13 A 258 LEU SER ARG LEU GLU GLU ILE ALA GLU GLU GLY SER GLU SEQRES 14 A 258 THR GLN VAL PRO GLY LEU ASP ILE SER ALA LEU LEU PRO SEQRES 15 A 258 SER ASP PHE SER ARG TYR PHE GLN TYR GLU GLY SER LEU SEQRES 16 A 258 THR THR PRO PRO CYS ALA GLN GLY VAL ILE TRP THR VAL SEQRES 17 A 258 PHE ASN GLN THR VAL MET LEU SER ALA LYS GLN LEU HIS SEQRES 18 A 258 THR LEU SER ASP THR LEU TRP GLY PRO GLY ASP SER ARG SEQRES 19 A 258 LEU GLN LEU ASN PHE ARG ALA THR GLN PRO LEU ASN GLY SEQRES 20 A 258 ARG VAL ILE GLU ALA SER PHE PRO ALA GLY VAL SEQRES 1 B 258 ASP GLN SER HIS TRP ARG TYR GLY GLY ASP PRO PRO TRP SEQRES 2 B 258 PRO ARG VAL SER PRO ALA CYS ALA GLY ARG PHE GLN SER SEQRES 3 B 258 PRO VAL ASP ILE ARG PRO GLN LEU ALA ALA PHE CYS PRO SEQRES 4 B 258 ALA LEU ARG PRO LEU GLU LEU LEU GLY PHE GLN LEU PRO SEQRES 5 B 258 PRO LEU PRO GLU LEU ARG LEU ARG ASN ASN GLY HIS SER SEQRES 6 B 258 VAL GLN LEU THR LEU PRO PRO GLY LEU GLU MET ALA LEU SEQRES 7 B 258 GLY PRO GLY ARG GLU TYR ARG ALA LEU GLN LEU HIS LEU SEQRES 8 B 258 HIS TRP GLY ALA ALA GLY ARG PRO GLY SER GLU HIS THR SEQRES 9 B 258 VAL GLU GLY HIS ARG PHE PRO ALA GLU ILE HIS VAL VAL SEQRES 10 B 258 HIS LEU SER THR ALA PHE ALA ARG VAL ASP GLU ALA LEU SEQRES 11 B 258 GLY ARG PRO GLY GLY LEU ALA VAL LEU ALA ALA PHE LEU SEQRES 12 B 258 GLU GLU GLY PRO GLU GLU ASN SER ALA TYR GLU GLN LEU SEQRES 13 B 258 LEU SER ARG LEU GLU GLU ILE ALA GLU GLU GLY SER GLU SEQRES 14 B 258 THR GLN VAL PRO GLY LEU ASP ILE SER ALA LEU LEU PRO SEQRES 15 B 258 SER ASP PHE SER ARG TYR PHE GLN TYR GLU GLY SER LEU SEQRES 16 B 258 THR THR PRO PRO CYS ALA GLN GLY VAL ILE TRP THR VAL SEQRES 17 B 258 PHE ASN GLN THR VAL MET LEU SER ALA LYS GLN LEU HIS SEQRES 18 B 258 THR LEU SER ASP THR LEU TRP GLY PRO GLY ASP SER ARG SEQRES 19 B 258 LEU GLN LEU ASN PHE ARG ALA THR GLN PRO LEU ASN GLY SEQRES 20 B 258 ARG VAL ILE GLU ALA SER PHE PRO ALA GLY VAL HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET ZN A 504 1 HET CL A 505 1 HET CL A 506 1 HET ACT A 507 4 HET ZN B 503 1 HET CL B 504 1 HET ACT B 505 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 5 ZN 2(ZN 2+) FORMUL 6 CL 3(CL 1-) FORMUL 8 ACT 2(C2 H3 O2 1-) FORMUL 12 HOH *577(H2 O) HELIX 1 AA1 PRO A 148 SER A 153 1 6 HELIX 2 AA2 PRO A 154 GLY A 158 5 5 HELIX 3 AA3 ARG A 167 ALA A 171 5 5 HELIX 4 AA4 ARG A 261 LEU A 266 1 6 HELIX 5 AA5 ASN A 286 SER A 294 1 9 HELIX 6 AA6 ARG A 295 ALA A 300 5 6 HELIX 7 AA7 ASP A 312 LEU A 317 5 6 HELIX 8 AA8 ALA A 353 THR A 362 1 10 HELIX 9 AA9 GLY A 365 SER A 369 5 5 HELIX 10 AB1 PRO B 148 SER B 153 1 6 HELIX 11 AB2 PRO B 154 GLY B 158 5 5 HELIX 12 AB3 ARG B 167 ALA B 171 5 5 HELIX 13 AB4 ARG B 261 LEU B 266 1 6 HELIX 14 AB5 ASN B 286 SER B 294 1 9 HELIX 15 AB6 ARG B 295 ALA B 300 5 6 HELIX 16 AB7 ASP B 312 LEU B 317 5 6 HELIX 17 AB8 ALA B 353 THR B 362 1 10 SHEET 1 AA1 2 ASP A 165 ILE A 166 0 SHEET 2 AA1 2 THR A 240 VAL A 241 1 O THR A 240 N ILE A 166 SHEET 1 AA210 ALA A 172 PHE A 173 0 SHEET 2 AA210 GLU A 387 ALA A 388 1 O ALA A 388 N ALA A 172 SHEET 3 AA210 TYR A 324 SER A 330 -1 N GLN A 326 O GLU A 387 SHEET 4 AA210 GLN A 338 PHE A 345 -1 O VAL A 340 N GLY A 329 SHEET 5 AA210 LEU A 272 GLY A 282 1 N ALA A 276 O THR A 343 SHEET 6 AA210 ALA A 248 SER A 256 -1 N ALA A 248 O LEU A 279 SHEET 7 AA210 ARG A 218 TRP A 229 -1 N LEU A 223 O VAL A 253 SHEET 8 AA210 VAL A 202 THR A 205 -1 N LEU A 204 O LEU A 225 SHEET 9 AA210 LEU A 193 ASN A 197 -1 N ARG A 196 O GLN A 203 SHEET 10 AA210 GLU A 305 VAL A 308 -1 O VAL A 308 N LEU A 193 SHEET 1 AA3 6 GLU A 181 LEU A 183 0 SHEET 2 AA3 6 GLU A 211 GLY A 215 -1 O GLU A 211 N LEU A 183 SHEET 3 AA3 6 ARG A 218 TRP A 229 -1 O ARG A 218 N LEU A 214 SHEET 4 AA3 6 ALA A 248 SER A 256 -1 O VAL A 253 N LEU A 223 SHEET 5 AA3 6 LEU A 272 GLY A 282 -1 O LEU A 279 N ALA A 248 SHEET 6 AA3 6 VAL A 349 SER A 352 1 O VAL A 349 N GLU A 280 SHEET 1 AA4 2 ASP B 165 ILE B 166 0 SHEET 2 AA4 2 THR B 240 VAL B 241 1 O THR B 240 N ILE B 166 SHEET 1 AA510 ALA B 172 PHE B 173 0 SHEET 2 AA510 GLU B 387 ALA B 388 1 O ALA B 388 N ALA B 172 SHEET 3 AA510 TYR B 324 SER B 330 -1 N GLN B 326 O GLU B 387 SHEET 4 AA510 GLN B 338 PHE B 345 -1 O VAL B 340 N GLY B 329 SHEET 5 AA510 LEU B 272 GLY B 282 1 N ALA B 276 O THR B 343 SHEET 6 AA510 ALA B 248 SER B 256 -1 N ALA B 248 O LEU B 279 SHEET 7 AA510 GLU B 219 TRP B 229 -1 N ARG B 221 O LEU B 255 SHEET 8 AA510 VAL B 202 THR B 205 -1 N LEU B 204 O LEU B 225 SHEET 9 AA510 LEU B 193 ASN B 197 -1 N ARG B 196 O GLN B 203 SHEET 10 AA510 GLU B 305 VAL B 308 -1 O VAL B 308 N LEU B 193 SHEET 1 AA6 6 GLU B 181 LEU B 183 0 SHEET 2 AA6 6 GLU B 211 ALA B 213 -1 O GLU B 211 N LEU B 183 SHEET 3 AA6 6 GLU B 219 TRP B 229 -1 O TYR B 220 N MET B 212 SHEET 4 AA6 6 ALA B 248 SER B 256 -1 O LEU B 255 N ARG B 221 SHEET 5 AA6 6 LEU B 272 GLY B 282 -1 O LEU B 279 N ALA B 248 SHEET 6 AA6 6 VAL B 349 SER B 352 1 O LEU B 351 N GLU B 280 SSBOND 1 CYS A 156 CYS A 336 1555 1555 2.07 SSBOND 2 CYS B 156 CYS B 336 1555 1555 2.03 LINK ND2 ASN A 346 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 346 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.41 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.40 LINK NE2 HIS A 226 ZN ZN A 504 1555 1555 2.03 LINK NE2 HIS A 228 ZN ZN A 504 1555 1555 2.10 LINK ND1 HIS A 251 ZN ZN A 504 1555 1555 2.06 LINK ZN ZN A 504 O ACT A 507 1555 1555 2.16 LINK NE2 HIS B 226 ZN ZN B 503 1555 1555 2.00 LINK NE2 HIS B 228 ZN ZN B 503 1555 1555 2.11 LINK ND1 HIS B 251 ZN ZN B 503 1555 1555 2.04 LINK ZN ZN B 503 OXT ACT B 505 1555 1555 2.16 CISPEP 1 ASP A 146 PRO A 147 0 0.13 CISPEP 2 SER A 162 PRO A 163 0 -3.40 CISPEP 3 LEU A 190 PRO A 191 0 3.71 CISPEP 4 PRO A 334 PRO A 335 0 15.77 CISPEP 5 ASP B 146 PRO B 147 0 -2.78 CISPEP 6 ASP B 146 PRO B 147 0 -2.90 CISPEP 7 SER B 162 PRO B 163 0 -1.22 CISPEP 8 LEU B 190 PRO B 191 0 4.39 CISPEP 9 PRO B 334 PRO B 335 0 12.34 CRYST1 113.930 78.340 74.320 90.00 128.22 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008777 0.000000 0.006911 0.00000 SCALE2 0.000000 0.012765 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017125 0.00000