HEADER SPLICING 28-FEB-20 6Y75 TITLE BIL2 DOMAIN FROM T.THERMOPHILA BUBL1 LOCUS (C1A-N143A) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD(P)(+)--ARGININE ADP-RIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: MONO(ADP-RIBOSYL)TRANSFERASE; COMPND 5 EC: 2.4.2.31; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NAD(P)(+)--ARGININE ADP-RIBOSYLTRANSFERASE; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: MONO(ADP-RIBOSYL)TRANSFERASE; COMPND 11 EC: 2.4.2.31; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TETRAHYMENA THERMOPHILA (STRAIN SB210); SOURCE 3 ORGANISM_TAXID: 312017; SOURCE 4 GENE: TTHERM_00085190; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: TETRAHYMENA THERMOPHILA (STRAIN SB210); SOURCE 9 ORGANISM_TAXID: 312017; SOURCE 10 GENE: TTHERM_00085190; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS INTEIN, PTM, UBIQUITIN, SPLICING EXPDTA X-RAY DIFFRACTION AUTHOR A.ILARI,V.CHIARINI REVDAT 3 24-JAN-24 6Y75 1 REMARK REVDAT 2 10-FEB-21 6Y75 1 JRNL REVDAT 1 03-FEB-21 6Y75 0 JRNL AUTH V.CHIARINI,A.FIORILLO,S.CAMERINI,M.CRESCENZI,S.NAKAMURA, JRNL AUTH 2 T.BATTISTA,L.GUIDONI,G.COLOTTI,A.ILARI JRNL TITL STRUCTURAL BASIS OF UBIQUITINATION MEDIATED BY PROTEIN JRNL TITL 2 SPLICING IN EARLY EUKARYA. JRNL REF BIOCHIM BIOPHYS ACTA GEN V.1865 29844 2021 JRNL REF 2 SUBJ JRNL REFN ISSN 1872-8006 JRNL PMID 33444728 JRNL DOI 10.1016/J.BBAGEN.2021.129844 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH V.CHIARINI,A.FIORILLO,S.CAMERINI,M.CRESCENZI,S.NAKAMURA, REMARK 1 AUTH 2 T.BATTISTA,L.GUIDONI,G.COLOTTI,A.ILARI REMARK 1 TITL STRUCTURAL BASIS OF UBIQUITINATION MEDIATED BY PROTEIN REMARK 1 TITL 2 SPLICING IN EARLY EUKARYA REMARK 1 REF BIOCHIM.BIOPHYS.ACTA 2021 REMARK 1 REFN ISSN 0006-3002 REMARK 1 DOI HTTPS://DOI.ORG/10.1016/J.BBAGEN.2021.129844 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 32698 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.256 REMARK 3 R VALUE (WORKING SET) : 0.254 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1662 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2384 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4886 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 268 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.25000 REMARK 3 B22 (A**2) : -0.12000 REMARK 3 B33 (A**2) : -0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.391 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.281 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.225 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.649 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.867 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5018 ; 0.003 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6769 ; 0.943 ; 1.630 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 602 ; 5.973 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 268 ;33.461 ;24.776 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 885 ;17.107 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;21.989 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 661 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3800 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 78 A 230 4 REMARK 3 1 B 78 B 230 4 REMARK 3 1 C 78 C 230 4 REMARK 3 1 D 78 D 230 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1211 ; 0.210 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1211 ; 0.230 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1211 ; 0.250 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 D (A): 1211 ; 0.280 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1211 ; 4.940 ; 2.000 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1211 ; 4.840 ; 2.000 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1211 ; 4.030 ; 2.000 REMARK 3 MEDIUM THERMAL 1 D (A**2): 1211 ; 9.200 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6Y75 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-FEB-20. REMARK 100 THE DEPOSITION ID IS D_1292106021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34430 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.360 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.41 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6TMM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MG FORMATE 0.1M, PEG3350 19%, TRIS REMARK 280 50MM, NACL 250 MM., PH 8.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.80250 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 603 O HOH B 660 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU B 23 ZN ZN C 301 2647 1.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 96 2.03 84.01 REMARK 500 ASN A 130 -65.80 75.95 REMARK 500 TYR B 96 -4.36 87.12 REMARK 500 ASN B 130 -68.02 79.71 REMARK 500 TYR C 96 -3.14 85.63 REMARK 500 ASN C 130 -67.19 75.28 REMARK 500 ASN C 137 36.21 39.48 REMARK 500 TYR D 96 -0.27 84.71 REMARK 500 ASN D 130 -68.44 78.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 678 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 679 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A 680 DISTANCE = 9.19 ANGSTROMS REMARK 525 HOH A 681 DISTANCE = 10.59 ANGSTROMS REMARK 525 HOH B 676 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH B 677 DISTANCE = 8.13 ANGSTROMS REMARK 525 HOH C 475 DISTANCE = 6.36 ANGSTROMS REMARK 525 HOH D 435 DISTANCE = 5.98 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A -4 N REMARK 620 2 ASN A -4 O 74.2 REMARK 620 3 HIS A 48 NE2 99.2 96.3 REMARK 620 4 HIS A 125 NE2 157.4 91.0 99.3 REMARK 620 5 GLU D 23 OE1 58.5 28.5 120.4 100.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B -4 N REMARK 620 2 ASN B -4 O 71.7 REMARK 620 3 HIS B 48 NE2 96.0 88.8 REMARK 620 4 HIS B 125 NE2 153.7 88.6 100.9 REMARK 620 5 HOH B 657 O 88.1 158.6 100.8 108.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C -4 N REMARK 620 2 ASN C -4 O 71.8 REMARK 620 3 HIS C 48 NE2 97.1 95.8 REMARK 620 4 HIS C 125 NE2 152.1 90.2 105.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D -4 N REMARK 620 2 ASN D -4 O 72.4 REMARK 620 3 HIS D 48 NE2 94.2 89.3 REMARK 620 4 HIS D 125 NE2 153.2 87.5 103.3 REMARK 620 5 HOH D 429 O 93.8 158.9 107.9 99.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 301 DBREF 6Y75 A -4 148 UNP Q236S9 Q236S9_TETTS 481 633 DBREF 6Y75 B -4 145 UNP Q236S9 Q236S9_TETTS 481 630 DBREF 6Y75 C -4 148 UNP Q236S9 Q236S9_TETTS 481 633 DBREF 6Y75 D -4 145 UNP Q236S9 Q236S9_TETTS 481 630 SEQADV 6Y75 ALA A 1 UNP Q236S9 CYS 486 CONFLICT SEQADV 6Y75 ALA A 143 UNP Q236S9 ASN 628 CONFLICT SEQADV 6Y75 ALA B 1 UNP Q236S9 CYS 486 CONFLICT SEQADV 6Y75 ALA B 143 UNP Q236S9 ASN 628 CONFLICT SEQADV 6Y75 ALA C 1 UNP Q236S9 CYS 486 CONFLICT SEQADV 6Y75 ALA C 143 UNP Q236S9 ASN 628 CONFLICT SEQADV 6Y75 ALA D 1 UNP Q236S9 CYS 486 CONFLICT SEQADV 6Y75 ALA D 143 UNP Q236S9 ASN 628 CONFLICT SEQRES 1 A 153 ASN LEU ARG GLY GLY ALA PHE VAL SER ASN THR GLN ILE SEQRES 2 A 153 THR MET ALA ASP LYS GLN LYS LYS PHE ILE ASN GLU ILE SEQRES 3 A 153 GLN GLU GLY ASP LEU VAL ARG SER TYR SER ILE THR ASP SEQRES 4 A 153 GLU THR PHE GLN GLN ASN ALA VAL THR SER ILE VAL LYS SEQRES 5 A 153 HIS GLU ALA ASP GLN LEU CYS GLN ILE ASN PHE GLY LYS SEQRES 6 A 153 GLN HIS VAL VAL CYS THR VAL ASN HIS ARG PHE TYR ASP SEQRES 7 A 153 PRO GLU SER LYS LEU TRP LYS SER VAL CYS PRO HIS PRO SEQRES 8 A 153 GLY SER GLY ILE SER PHE LEU LYS LYS TYR ASP TYR LEU SEQRES 9 A 153 LEU SER GLU GLU GLY GLU LYS LEU GLN ILE THR GLU ILE SEQRES 10 A 153 LYS THR PHE THR THR LYS GLN PRO VAL PHE ILE TYR HIS SEQRES 11 A 153 ILE GLN VAL GLU ASN ASN HIS ASN PHE PHE ALA ASN GLY SEQRES 12 A 153 VAL LEU ALA HIS ALA MET GLN VAL SER ILE SEQRES 1 B 150 ASN LEU ARG GLY GLY ALA PHE VAL SER ASN THR GLN ILE SEQRES 2 B 150 THR MET ALA ASP LYS GLN LYS LYS PHE ILE ASN GLU ILE SEQRES 3 B 150 GLN GLU GLY ASP LEU VAL ARG SER TYR SER ILE THR ASP SEQRES 4 B 150 GLU THR PHE GLN GLN ASN ALA VAL THR SER ILE VAL LYS SEQRES 5 B 150 HIS GLU ALA ASP GLN LEU CYS GLN ILE ASN PHE GLY LYS SEQRES 6 B 150 GLN HIS VAL VAL CYS THR VAL ASN HIS ARG PHE TYR ASP SEQRES 7 B 150 PRO GLU SER LYS LEU TRP LYS SER VAL CYS PRO HIS PRO SEQRES 8 B 150 GLY SER GLY ILE SER PHE LEU LYS LYS TYR ASP TYR LEU SEQRES 9 B 150 LEU SER GLU GLU GLY GLU LYS LEU GLN ILE THR GLU ILE SEQRES 10 B 150 LYS THR PHE THR THR LYS GLN PRO VAL PHE ILE TYR HIS SEQRES 11 B 150 ILE GLN VAL GLU ASN ASN HIS ASN PHE PHE ALA ASN GLY SEQRES 12 B 150 VAL LEU ALA HIS ALA MET GLN SEQRES 1 C 153 ASN LEU ARG GLY GLY ALA PHE VAL SER ASN THR GLN ILE SEQRES 2 C 153 THR MET ALA ASP LYS GLN LYS LYS PHE ILE ASN GLU ILE SEQRES 3 C 153 GLN GLU GLY ASP LEU VAL ARG SER TYR SER ILE THR ASP SEQRES 4 C 153 GLU THR PHE GLN GLN ASN ALA VAL THR SER ILE VAL LYS SEQRES 5 C 153 HIS GLU ALA ASP GLN LEU CYS GLN ILE ASN PHE GLY LYS SEQRES 6 C 153 GLN HIS VAL VAL CYS THR VAL ASN HIS ARG PHE TYR ASP SEQRES 7 C 153 PRO GLU SER LYS LEU TRP LYS SER VAL CYS PRO HIS PRO SEQRES 8 C 153 GLY SER GLY ILE SER PHE LEU LYS LYS TYR ASP TYR LEU SEQRES 9 C 153 LEU SER GLU GLU GLY GLU LYS LEU GLN ILE THR GLU ILE SEQRES 10 C 153 LYS THR PHE THR THR LYS GLN PRO VAL PHE ILE TYR HIS SEQRES 11 C 153 ILE GLN VAL GLU ASN ASN HIS ASN PHE PHE ALA ASN GLY SEQRES 12 C 153 VAL LEU ALA HIS ALA MET GLN VAL SER ILE SEQRES 1 D 150 ASN LEU ARG GLY GLY ALA PHE VAL SER ASN THR GLN ILE SEQRES 2 D 150 THR MET ALA ASP LYS GLN LYS LYS PHE ILE ASN GLU ILE SEQRES 3 D 150 GLN GLU GLY ASP LEU VAL ARG SER TYR SER ILE THR ASP SEQRES 4 D 150 GLU THR PHE GLN GLN ASN ALA VAL THR SER ILE VAL LYS SEQRES 5 D 150 HIS GLU ALA ASP GLN LEU CYS GLN ILE ASN PHE GLY LYS SEQRES 6 D 150 GLN HIS VAL VAL CYS THR VAL ASN HIS ARG PHE TYR ASP SEQRES 7 D 150 PRO GLU SER LYS LEU TRP LYS SER VAL CYS PRO HIS PRO SEQRES 8 D 150 GLY SER GLY ILE SER PHE LEU LYS LYS TYR ASP TYR LEU SEQRES 9 D 150 LEU SER GLU GLU GLY GLU LYS LEU GLN ILE THR GLU ILE SEQRES 10 D 150 LYS THR PHE THR THR LYS GLN PRO VAL PHE ILE TYR HIS SEQRES 11 D 150 ILE GLN VAL GLU ASN ASN HIS ASN PHE PHE ALA ASN GLY SEQRES 12 D 150 VAL LEU ALA HIS ALA MET GLN HET PEG A 501 7 HET ZN A 502 1 HET PEG B 501 7 HET FMT B 502 3 HET ZN B 503 1 HET FMT B 504 3 HET ZN C 301 1 HET ZN D 301 1 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM ZN ZINC ION HETNAM FMT FORMIC ACID FORMUL 5 PEG 2(C4 H10 O3) FORMUL 6 ZN 4(ZN 2+) FORMUL 8 FMT 2(C H2 O2) FORMUL 13 HOH *268(H2 O) HELIX 1 AA1 ASN A 19 ILE A 21 5 3 HELIX 2 AA2 ASN B 19 ILE B 21 5 3 HELIX 3 AA3 ASN C 19 ILE C 21 5 3 HELIX 4 AA4 ASN D 19 ILE D 21 5 3 SHEET 1 AA1 6 LEU A 26 SER A 31 0 SHEET 2 AA1 6 THR A 36 PHE A 58 -1 O ASN A 40 N VAL A 27 SHEET 3 AA1 6 GLU A 111 VAL A 128 -1 O GLU A 111 N ASN A 57 SHEET 4 AA1 6 PHE A 2 VAL A 3 -1 N PHE A 2 O TYR A 124 SHEET 5 AA1 6 GLN A 61 CYS A 65 -1 O VAL A 64 N VAL A 3 SHEET 6 AA1 6 THR A 36 PHE A 58 -1 N CYS A 54 O CYS A 65 SHEET 1 AA2 2 GLN A 7 THR A 9 0 SHEET 2 AA2 2 LYS A 15 PHE A 17 -1 O LYS A 16 N ILE A 8 SHEET 1 AA3 3 ARG A 70 ASP A 73 0 SHEET 2 AA3 3 LEU A 78 SER A 81 -1 O LYS A 80 N PHE A 71 SHEET 3 AA3 3 SER A 91 PHE A 92 1 O SER A 91 N SER A 81 SHEET 1 AA4 2 TYR A 98 LEU A 100 0 SHEET 2 AA4 2 LYS A 106 GLN A 108 -1 O LEU A 107 N LEU A 99 SHEET 1 AA5 2 ASN A 133 ALA A 136 0 SHEET 2 AA5 2 VAL A 139 HIS A 142 -1 O ALA A 141 N PHE A 134 SHEET 1 AA6 6 LEU B 26 SER B 31 0 SHEET 2 AA6 6 THR B 36 PHE B 58 -1 O ASN B 40 N VAL B 27 SHEET 3 AA6 6 GLU B 111 VAL B 128 -1 O ILE B 123 N HIS B 48 SHEET 4 AA6 6 PHE B 2 VAL B 3 -1 N PHE B 2 O TYR B 124 SHEET 5 AA6 6 GLN B 61 CYS B 65 -1 O VAL B 64 N VAL B 3 SHEET 6 AA6 6 THR B 36 PHE B 58 -1 N CYS B 54 O CYS B 65 SHEET 1 AA7 2 GLN B 7 THR B 9 0 SHEET 2 AA7 2 LYS B 15 PHE B 17 -1 O LYS B 16 N ILE B 8 SHEET 1 AA8 3 PHE B 71 ASP B 73 0 SHEET 2 AA8 3 LEU B 78 SER B 81 -1 O LEU B 78 N ASP B 73 SHEET 3 AA8 3 SER B 91 PHE B 92 1 O SER B 91 N SER B 81 SHEET 1 AA9 2 TYR B 98 LEU B 100 0 SHEET 2 AA9 2 LYS B 106 GLN B 108 -1 O LEU B 107 N LEU B 99 SHEET 1 AB1 2 ASN B 133 ALA B 136 0 SHEET 2 AB1 2 VAL B 139 HIS B 142 -1 O ALA B 141 N PHE B 134 SHEET 1 AB2 6 LEU C 26 SER C 31 0 SHEET 2 AB2 6 THR C 36 PHE C 58 -1 O ASN C 40 N VAL C 27 SHEET 3 AB2 6 GLU C 111 VAL C 128 -1 O GLU C 111 N ASN C 57 SHEET 4 AB2 6 PHE C 2 VAL C 3 -1 N PHE C 2 O TYR C 124 SHEET 5 AB2 6 GLN C 61 CYS C 65 -1 O VAL C 64 N VAL C 3 SHEET 6 AB2 6 THR C 36 PHE C 58 -1 N CYS C 54 O CYS C 65 SHEET 1 AB3 2 GLN C 7 THR C 9 0 SHEET 2 AB3 2 LYS C 15 PHE C 17 -1 O LYS C 16 N ILE C 8 SHEET 1 AB4 3 ARG C 70 ASP C 73 0 SHEET 2 AB4 3 LEU C 78 SER C 81 -1 O LYS C 80 N PHE C 71 SHEET 3 AB4 3 SER C 91 PHE C 92 1 O SER C 91 N SER C 81 SHEET 1 AB5 2 TYR C 98 LEU C 100 0 SHEET 2 AB5 2 LYS C 106 GLN C 108 -1 O LEU C 107 N LEU C 99 SHEET 1 AB6 2 ASN C 133 ALA C 136 0 SHEET 2 AB6 2 VAL C 139 HIS C 142 -1 O VAL C 139 N ALA C 136 SHEET 1 AB7 6 LEU D 26 SER D 31 0 SHEET 2 AB7 6 THR D 36 PHE D 58 -1 O ASN D 40 N VAL D 27 SHEET 3 AB7 6 GLU D 111 VAL D 128 -1 O GLU D 111 N ASN D 57 SHEET 4 AB7 6 PHE D 2 VAL D 3 -1 N PHE D 2 O TYR D 124 SHEET 5 AB7 6 GLN D 61 CYS D 65 -1 O VAL D 64 N VAL D 3 SHEET 6 AB7 6 THR D 36 PHE D 58 -1 N CYS D 54 O CYS D 65 SHEET 1 AB8 2 GLN D 7 THR D 9 0 SHEET 2 AB8 2 LYS D 15 PHE D 17 -1 O LYS D 16 N ILE D 8 SHEET 1 AB9 3 PHE D 71 ASP D 73 0 SHEET 2 AB9 3 LEU D 78 SER D 81 -1 O LYS D 80 N PHE D 71 SHEET 3 AB9 3 SER D 91 PHE D 92 1 O SER D 91 N SER D 81 SHEET 1 AC1 2 TYR D 98 LEU D 100 0 SHEET 2 AC1 2 LYS D 106 GLN D 108 -1 O LEU D 107 N LEU D 99 SHEET 1 AC2 2 ASN D 133 ALA D 136 0 SHEET 2 AC2 2 VAL D 139 HIS D 142 -1 O ALA D 141 N PHE D 134 SSBOND 1 CYS A 83 CYS B 83 1555 1555 2.08 SSBOND 2 CYS C 83 CYS D 83 1555 1555 2.05 LINK N ASN A -4 ZN ZN A 502 1555 1555 2.17 LINK O ASN A -4 ZN ZN A 502 1555 1555 2.23 LINK NE2 HIS A 48 ZN ZN A 502 1555 1555 2.08 LINK NE2 HIS A 125 ZN ZN A 502 1555 1555 2.11 LINK ZN ZN A 502 OE1 GLU D 23 2657 1555 1.77 LINK N ASN B -4 ZN ZN B 503 1555 1555 2.16 LINK O ASN B -4 ZN ZN B 503 1555 1555 2.42 LINK NE2 HIS B 48 ZN ZN B 503 1555 1555 2.12 LINK NE2 HIS B 125 ZN ZN B 503 1555 1555 2.10 LINK ZN ZN B 503 O HOH B 657 1555 1555 2.41 LINK N ASN C -4 ZN ZN C 301 1555 1555 2.22 LINK O ASN C -4 ZN ZN C 301 1555 1555 2.33 LINK NE2 HIS C 48 ZN ZN C 301 1555 1555 1.92 LINK NE2 HIS C 125 ZN ZN C 301 1555 1555 2.11 LINK N ASN D -4 ZN ZN D 301 1555 1555 2.11 LINK O ASN D -4 ZN ZN D 301 1555 1555 2.42 LINK NE2 HIS D 48 ZN ZN D 301 1555 1555 2.03 LINK NE2 HIS D 125 ZN ZN D 301 1555 1555 2.18 LINK ZN ZN D 301 O HOH D 429 1555 1555 2.43 SITE 1 AC1 3 ASN A 130 HIS A 132 GLU D 111 SITE 1 AC2 3 ASN A -4 HIS A 48 HIS A 125 SITE 1 AC3 6 TYR B 96 GLN B 108 FMT B 502 HOH B 604 SITE 2 AC3 6 GLN D 38 GLN D 39 SITE 1 AC4 4 ASP B 97 PEG B 501 THR D 36 PHE D 37 SITE 1 AC5 4 ASN B -4 HIS B 48 HIS B 125 HOH B 657 SITE 1 AC6 1 ILE B 112 SITE 1 AC7 3 ASN C -4 HIS C 48 HIS C 125 SITE 1 AC8 4 ASN D -4 HIS D 48 HIS D 125 HOH D 429 CRYST1 76.821 67.605 82.445 90.00 114.58 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013017 0.000000 0.005953 0.00000 SCALE2 0.000000 0.014792 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013337 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.197352 -0.968334 -0.152911 -8.75422 1 MTRIX2 2 -0.969996 0.170290 0.173517 -21.03252 1 MTRIX3 2 -0.141983 0.182567 -0.972887 89.47970 1 MTRIX1 3 -0.028602 0.990995 -0.130806 0.15792 1 MTRIX2 3 -0.988579 -0.047414 -0.143052 3.27812 1 MTRIX3 3 -0.147965 0.125221 0.981033 -50.94279 1 MTRIX1 4 0.986437 -0.161483 0.029403 -5.62386 1 MTRIX2 4 -0.162964 -0.942149 0.292913 -31.33918 1 MTRIX3 4 -0.019599 -0.293732 -0.955687 139.14238 1