data_6Y8K # _entry.id 6Y8K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6Y8K pdb_00006y8k 10.2210/pdb6y8k/pdb WWPDB D_1292106462 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-02-03 2 'Structure model' 1 1 2021-02-10 3 'Structure model' 1 2 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' atom_type 4 3 'Structure model' chem_comp_atom 5 3 'Structure model' chem_comp_bond 6 3 'Structure model' database_2 7 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_atom_type.pdbx_N_electrons' 4 3 'Structure model' '_atom_type.pdbx_scat_Z' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6Y8K _pdbx_database_status.recvd_initial_deposition_date 2020-03-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Upadhyaya, P.' 1 ? 'Kublin, J.' 2 ? 'Dods, R.' 3 ? 'Kristensson, J.' 4 ? 'Lahdenranta, J.' 5 ? 'Kleyman, M.' 6 ? 'Repash, E.' 7 ? 'Ma, J.' 8 ? 'Mudd, G.' 9 ? 'Van Rietschoten, K.' 10 ? 'Haines, E.' 11 ? 'Harrison, H.' 12 ? 'Beswick, P.' 13 ? 'Chen, L.' 14 ? 'McDonnell, K.' 15 ? 'Battula, S.' 16 ? 'Hurov, K.' 17 ? 'Keen, N.' 18 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J Immunother Cancer' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2051-1426 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Anticancer immunity induced by a synthetic tumor-targeted CD137 agonist.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1136/jitc-2020-001762 _citation.pdbx_database_id_PubMed 33500260 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Upadhyaya, P.' 1 ? primary 'Lahdenranta, J.' 2 ? primary 'Hurov, K.' 3 ? primary 'Battula, S.' 4 ? primary 'Dods, R.' 5 ? primary 'Haines, E.' 6 ? primary 'Kleyman, M.' 7 ? primary 'Kristensson, J.' 8 ? primary 'Kublin, J.' 9 ? primary 'Lani, R.' 10 ? primary 'Ma, J.' 11 ? primary 'Mudd, G.' 12 ? primary 'Repash, E.' 13 ? primary 'Van Rietschoten, K.' 14 ? primary 'Stephen, T.' 15 ? primary 'You, F.' 16 ? primary 'Harrison, H.' 17 ? primary 'Chen, L.' 18 ? primary 'McDonnell, K.' 19 ? primary 'Brandish, P.' 20 ? primary 'Keen, N.' 21 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tumor necrosis factor receptor superfamily member 9' 17765.094 1 ? ? ? ? 2 polymer syn BCY10916 1753.969 1 ? ? ? BCY10916 3 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 non-polymer syn "1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one" 255.313 1 ? ? ? ? 8 water nat water 18.015 30 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '4-1BB ligand receptor,CDw137,T-cell antigen 4-1BB homolog,T-cell antigen ILA' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MVSAIVLYVLLAAAAHSAFALQDPCSNCPAGTFCDNNRNQICSPCPPNSFSSAGGQRTCDICRQCKGVFRTRKECSSTSN AECDCTPGFHCLGAGCSMCEQDCKQGQELTKKGCKDCSFGTFNDQKRGICRPWTDCSLDGKSVLVDGTKERDVVCGPGSH HHHHH ; ;MVSAIVLYVLLAAAAHSAFALQDPCSNCPAGTFCDNNRNQICSPCPPNSFSSAGGQRTCDICRQCKGVFRTRKECSSTSN AECDCTPGFHCLGAGCSMCEQDCKQGQELTKKGCKDCSFGTFNDQKRGICRPWTDCSLDGKSVLVDGTKERDVVCGPGSH HHHHH ; AAA ? 2 'polypeptide(L)' no yes 'CIEEGQYCFADPY(NLE)C' CIEEGQYCFADPYLC PPP ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ACETATE ION' ACT 4 1,2-ETHANEDIOL EDO 5 'SULFATE ION' SO4 6 'SODIUM ION' NA 7 "1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one" 29N 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 SER n 1 4 ALA n 1 5 ILE n 1 6 VAL n 1 7 LEU n 1 8 TYR n 1 9 VAL n 1 10 LEU n 1 11 LEU n 1 12 ALA n 1 13 ALA n 1 14 ALA n 1 15 ALA n 1 16 HIS n 1 17 SER n 1 18 ALA n 1 19 PHE n 1 20 ALA n 1 21 LEU n 1 22 GLN n 1 23 ASP n 1 24 PRO n 1 25 CYS n 1 26 SER n 1 27 ASN n 1 28 CYS n 1 29 PRO n 1 30 ALA n 1 31 GLY n 1 32 THR n 1 33 PHE n 1 34 CYS n 1 35 ASP n 1 36 ASN n 1 37 ASN n 1 38 ARG n 1 39 ASN n 1 40 GLN n 1 41 ILE n 1 42 CYS n 1 43 SER n 1 44 PRO n 1 45 CYS n 1 46 PRO n 1 47 PRO n 1 48 ASN n 1 49 SER n 1 50 PHE n 1 51 SER n 1 52 SER n 1 53 ALA n 1 54 GLY n 1 55 GLY n 1 56 GLN n 1 57 ARG n 1 58 THR n 1 59 CYS n 1 60 ASP n 1 61 ILE n 1 62 CYS n 1 63 ARG n 1 64 GLN n 1 65 CYS n 1 66 LYS n 1 67 GLY n 1 68 VAL n 1 69 PHE n 1 70 ARG n 1 71 THR n 1 72 ARG n 1 73 LYS n 1 74 GLU n 1 75 CYS n 1 76 SER n 1 77 SER n 1 78 THR n 1 79 SER n 1 80 ASN n 1 81 ALA n 1 82 GLU n 1 83 CYS n 1 84 ASP n 1 85 CYS n 1 86 THR n 1 87 PRO n 1 88 GLY n 1 89 PHE n 1 90 HIS n 1 91 CYS n 1 92 LEU n 1 93 GLY n 1 94 ALA n 1 95 GLY n 1 96 CYS n 1 97 SER n 1 98 MET n 1 99 CYS n 1 100 GLU n 1 101 GLN n 1 102 ASP n 1 103 CYS n 1 104 LYS n 1 105 GLN n 1 106 GLY n 1 107 GLN n 1 108 GLU n 1 109 LEU n 1 110 THR n 1 111 LYS n 1 112 LYS n 1 113 GLY n 1 114 CYS n 1 115 LYS n 1 116 ASP n 1 117 CYS n 1 118 SER n 1 119 PHE n 1 120 GLY n 1 121 THR n 1 122 PHE n 1 123 ASN n 1 124 ASP n 1 125 GLN n 1 126 LYS n 1 127 ARG n 1 128 GLY n 1 129 ILE n 1 130 CYS n 1 131 ARG n 1 132 PRO n 1 133 TRP n 1 134 THR n 1 135 ASP n 1 136 CYS n 1 137 SER n 1 138 LEU n 1 139 ASP n 1 140 GLY n 1 141 LYS n 1 142 SER n 1 143 VAL n 1 144 LEU n 1 145 VAL n 1 146 ASP n 1 147 GLY n 1 148 THR n 1 149 LYS n 1 150 GLU n 1 151 ARG n 1 152 ASP n 1 153 VAL n 1 154 VAL n 1 155 CYS n 1 156 GLY n 1 157 PRO n 1 158 GLY n 1 159 SER n 1 160 HIS n 1 161 HIS n 1 162 HIS n 1 163 HIS n 1 164 HIS n 1 165 HIS n 2 1 CYS n 2 2 ILE n 2 3 GLU n 2 4 GLU n 2 5 GLY n 2 6 GLN n 2 7 TYR n 2 8 CYS n 2 9 PHE n 2 10 ALA n 2 11 ASP n 2 12 PRO n 2 13 TYR n 2 14 NLE n 2 15 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 165 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TNFRSF9, CD137, ILA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 29N non-polymer . "1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one" ;1,1',1''-(1,3,5-triazinane-1,3,5-triyl)triprop-2-en-1-one, bound form ; 'C12 H21 N3 O3' 255.313 ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NLE 'L-peptide linking' n NORLEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 4 ? ? ? AAA . n A 1 2 VAL 2 5 ? ? ? AAA . n A 1 3 SER 3 6 ? ? ? AAA . n A 1 4 ALA 4 7 ? ? ? AAA . n A 1 5 ILE 5 8 ? ? ? AAA . n A 1 6 VAL 6 9 ? ? ? AAA . n A 1 7 LEU 7 10 ? ? ? AAA . n A 1 8 TYR 8 11 ? ? ? AAA . n A 1 9 VAL 9 12 ? ? ? AAA . n A 1 10 LEU 10 13 ? ? ? AAA . n A 1 11 LEU 11 14 ? ? ? AAA . n A 1 12 ALA 12 15 ? ? ? AAA . n A 1 13 ALA 13 16 ? ? ? AAA . n A 1 14 ALA 14 17 ? ? ? AAA . n A 1 15 ALA 15 18 ? ? ? AAA . n A 1 16 HIS 16 19 ? ? ? AAA . n A 1 17 SER 17 20 ? ? ? AAA . n A 1 18 ALA 18 21 ? ? ? AAA . n A 1 19 PHE 19 22 ? ? ? AAA . n A 1 20 ALA 20 23 ? ? ? AAA . n A 1 21 LEU 21 24 ? ? ? AAA . n A 1 22 GLN 22 25 ? ? ? AAA . n A 1 23 ASP 23 26 26 ASP ASP AAA . n A 1 24 PRO 24 27 27 PRO PRO AAA . n A 1 25 CYS 25 28 28 CYS CYS AAA . n A 1 26 SER 26 29 29 SER SER AAA . n A 1 27 ASN 27 30 30 ASN ASN AAA . n A 1 28 CYS 28 31 31 CYS CYS AAA . n A 1 29 PRO 29 32 32 PRO PRO AAA . n A 1 30 ALA 30 33 33 ALA ALA AAA . n A 1 31 GLY 31 34 34 GLY GLY AAA . n A 1 32 THR 32 35 35 THR THR AAA . n A 1 33 PHE 33 36 36 PHE PHE AAA . n A 1 34 CYS 34 37 37 CYS CYS AAA . n A 1 35 ASP 35 38 38 ASP ASP AAA . n A 1 36 ASN 36 39 ? ? ? AAA . n A 1 37 ASN 37 40 ? ? ? AAA . n A 1 38 ARG 38 41 ? ? ? AAA . n A 1 39 ASN 39 42 ? ? ? AAA . n A 1 40 GLN 40 43 ? ? ? AAA . n A 1 41 ILE 41 44 44 ILE ILE AAA . n A 1 42 CYS 42 45 45 CYS CYS AAA . n A 1 43 SER 43 46 46 SER SER AAA . n A 1 44 PRO 44 47 47 PRO PRO AAA . n A 1 45 CYS 45 48 48 CYS CYS AAA . n A 1 46 PRO 46 49 49 PRO PRO AAA . n A 1 47 PRO 47 50 50 PRO PRO AAA . n A 1 48 ASN 48 51 51 ASN ASN AAA . n A 1 49 SER 49 52 52 SER SER AAA . n A 1 50 PHE 50 53 53 PHE PHE AAA . n A 1 51 SER 51 54 54 SER SER AAA . n A 1 52 SER 52 55 55 SER SER AAA . n A 1 53 ALA 53 56 56 ALA ALA AAA . n A 1 54 GLY 54 57 57 GLY GLY AAA . n A 1 55 GLY 55 58 58 GLY GLY AAA . n A 1 56 GLN 56 59 59 GLN GLN AAA . n A 1 57 ARG 57 60 60 ARG ARG AAA . n A 1 58 THR 58 61 61 THR THR AAA . n A 1 59 CYS 59 62 62 CYS CYS AAA . n A 1 60 ASP 60 63 63 ASP ASP AAA . n A 1 61 ILE 61 64 64 ILE ILE AAA . n A 1 62 CYS 62 65 65 CYS CYS AAA . n A 1 63 ARG 63 66 66 ARG ARG AAA . n A 1 64 GLN 64 67 67 GLN GLN AAA . n A 1 65 CYS 65 68 68 CYS CYS AAA . n A 1 66 LYS 66 69 69 LYS LYS AAA . n A 1 67 GLY 67 70 70 GLY GLY AAA . n A 1 68 VAL 68 71 71 VAL VAL AAA . n A 1 69 PHE 69 72 72 PHE PHE AAA . n A 1 70 ARG 70 73 73 ARG ARG AAA . n A 1 71 THR 71 74 74 THR THR AAA . n A 1 72 ARG 72 75 75 ARG ARG AAA . n A 1 73 LYS 73 76 76 LYS LYS AAA . n A 1 74 GLU 74 77 77 GLU GLU AAA . n A 1 75 CYS 75 78 78 CYS CYS AAA . n A 1 76 SER 76 79 79 SER SER AAA . n A 1 77 SER 77 80 80 SER SER AAA . n A 1 78 THR 78 81 81 THR THR AAA . n A 1 79 SER 79 82 82 SER SER AAA . n A 1 80 ASN 80 83 83 ASN ASN AAA . n A 1 81 ALA 81 84 84 ALA ALA AAA . n A 1 82 GLU 82 85 85 GLU GLU AAA . n A 1 83 CYS 83 86 86 CYS CYS AAA . n A 1 84 ASP 84 87 87 ASP ASP AAA . n A 1 85 CYS 85 88 88 CYS CYS AAA . n A 1 86 THR 86 89 89 THR THR AAA . n A 1 87 PRO 87 90 90 PRO PRO AAA . n A 1 88 GLY 88 91 91 GLY GLY AAA . n A 1 89 PHE 89 92 92 PHE PHE AAA . n A 1 90 HIS 90 93 93 HIS HIS AAA . n A 1 91 CYS 91 94 94 CYS CYS AAA . n A 1 92 LEU 92 95 95 LEU LEU AAA . n A 1 93 GLY 93 96 96 GLY GLY AAA . n A 1 94 ALA 94 97 97 ALA ALA AAA . n A 1 95 GLY 95 98 98 GLY GLY AAA . n A 1 96 CYS 96 99 99 CYS CYS AAA . n A 1 97 SER 97 100 100 SER SER AAA . n A 1 98 MET 98 101 101 MET MET AAA . n A 1 99 CYS 99 102 102 CYS CYS AAA . n A 1 100 GLU 100 103 103 GLU GLU AAA . n A 1 101 GLN 101 104 104 GLN GLN AAA . n A 1 102 ASP 102 105 105 ASP ASP AAA . n A 1 103 CYS 103 106 106 CYS CYS AAA . n A 1 104 LYS 104 107 107 LYS LYS AAA . n A 1 105 GLN 105 108 108 GLN GLN AAA . n A 1 106 GLY 106 109 109 GLY GLY AAA . n A 1 107 GLN 107 110 110 GLN GLN AAA . n A 1 108 GLU 108 111 111 GLU GLU AAA . n A 1 109 LEU 109 112 112 LEU LEU AAA . n A 1 110 THR 110 113 113 THR THR AAA . n A 1 111 LYS 111 114 114 LYS LYS AAA . n A 1 112 LYS 112 115 115 LYS LYS AAA . n A 1 113 GLY 113 116 116 GLY GLY AAA . n A 1 114 CYS 114 117 117 CYS CYS AAA . n A 1 115 LYS 115 118 118 LYS LYS AAA . n A 1 116 ASP 116 119 119 ASP ASP AAA . n A 1 117 CYS 117 120 120 CYS CYS AAA . n A 1 118 SER 118 121 121 SER SER AAA . n A 1 119 PHE 119 122 122 PHE PHE AAA . n A 1 120 GLY 120 123 123 GLY GLY AAA . n A 1 121 THR 121 124 124 THR THR AAA . n A 1 122 PHE 122 125 125 PHE PHE AAA . n A 1 123 ASN 123 126 126 ASN ASN AAA . n A 1 124 ASP 124 127 127 ASP ASP AAA . n A 1 125 GLN 125 128 128 GLN GLN AAA . n A 1 126 LYS 126 129 129 LYS LYS AAA . n A 1 127 ARG 127 130 130 ARG ARG AAA . n A 1 128 GLY 128 131 131 GLY GLY AAA . n A 1 129 ILE 129 132 132 ILE ILE AAA . n A 1 130 CYS 130 133 133 CYS CYS AAA . n A 1 131 ARG 131 134 134 ARG ARG AAA . n A 1 132 PRO 132 135 135 PRO PRO AAA . n A 1 133 TRP 133 136 136 TRP TRP AAA . n A 1 134 THR 134 137 137 THR THR AAA . n A 1 135 ASP 135 138 138 ASP ASP AAA . n A 1 136 CYS 136 139 139 CYS CYS AAA . n A 1 137 SER 137 140 140 SER SER AAA . n A 1 138 LEU 138 141 141 LEU LEU AAA . n A 1 139 ASP 139 142 142 ASP ASP AAA . n A 1 140 GLY 140 143 143 GLY GLY AAA . n A 1 141 LYS 141 144 144 LYS LYS AAA . n A 1 142 SER 142 145 145 SER SER AAA . n A 1 143 VAL 143 146 146 VAL VAL AAA . n A 1 144 LEU 144 147 147 LEU LEU AAA . n A 1 145 VAL 145 148 148 VAL VAL AAA . n A 1 146 ASP 146 149 149 ASP ASP AAA . n A 1 147 GLY 147 150 150 GLY GLY AAA . n A 1 148 THR 148 151 151 THR THR AAA . n A 1 149 LYS 149 152 152 LYS LYS AAA . n A 1 150 GLU 150 153 153 GLU GLU AAA . n A 1 151 ARG 151 154 154 ARG ARG AAA . n A 1 152 ASP 152 155 155 ASP ASP AAA . n A 1 153 VAL 153 156 156 VAL VAL AAA . n A 1 154 VAL 154 157 157 VAL VAL AAA . n A 1 155 CYS 155 158 158 CYS CYS AAA . n A 1 156 GLY 156 159 159 GLY GLY AAA . n A 1 157 PRO 157 160 160 PRO PRO AAA . n A 1 158 GLY 158 161 ? ? ? AAA . n A 1 159 SER 159 162 ? ? ? AAA . n A 1 160 HIS 160 163 ? ? ? AAA . n A 1 161 HIS 161 164 ? ? ? AAA . n A 1 162 HIS 162 165 ? ? ? AAA . n A 1 163 HIS 163 166 ? ? ? AAA . n A 1 164 HIS 164 167 ? ? ? AAA . n A 1 165 HIS 165 168 ? ? ? AAA . n B 2 1 CYS 1 1 1 CYS CYS PPP . n B 2 2 ILE 2 2 2 ILE ILE PPP . n B 2 3 GLU 3 3 3 GLU GLU PPP . n B 2 4 GLU 4 4 4 GLU GLU PPP . n B 2 5 GLY 5 5 5 GLY GLY PPP . n B 2 6 GLN 6 6 6 GLN GLN PPP . n B 2 7 TYR 7 7 7 TYR TYR PPP . n B 2 8 CYS 8 8 8 CYS CYS PPP . n B 2 9 PHE 9 9 9 PHE PHE PPP . n B 2 10 ALA 10 10 10 ALA ALA PPP . n B 2 11 ASP 11 11 11 ASP ASP PPP . n B 2 12 PRO 12 12 12 PRO PRO PPP . n B 2 13 TYR 13 13 13 TYR TYR PPP . n B 2 14 NLE 14 14 14 NLE NLE PPP . n B 2 15 CYS 15 15 15 CYS CYS PPP . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT 1 201 201 ACT ACT AAA . D 4 EDO 1 202 202 EDO EDO AAA . E 5 SO4 1 203 203 SO4 SO4 AAA . F 5 SO4 1 204 204 SO4 SO4 AAA . G 5 SO4 1 205 205 SO4 SO4 AAA . H 6 NA 1 206 206 NA NA AAA . I 7 29N 1 101 101 29N TA9 PPP . J 8 HOH 1 301 2 HOH HOH AAA . J 8 HOH 2 302 22 HOH HOH AAA . J 8 HOH 3 303 19 HOH HOH AAA . J 8 HOH 4 304 7 HOH HOH AAA . J 8 HOH 5 305 13 HOH HOH AAA . J 8 HOH 6 306 12 HOH HOH AAA . J 8 HOH 7 307 8 HOH HOH AAA . J 8 HOH 8 308 23 HOH HOH AAA . J 8 HOH 9 309 24 HOH HOH AAA . J 8 HOH 10 310 15 HOH HOH AAA . J 8 HOH 11 311 28 HOH HOH AAA . J 8 HOH 12 312 9 HOH HOH AAA . J 8 HOH 13 313 27 HOH HOH AAA . J 8 HOH 14 314 20 HOH HOH AAA . J 8 HOH 15 315 25 HOH HOH AAA . J 8 HOH 16 316 3 HOH HOH AAA . J 8 HOH 17 317 14 HOH HOH AAA . J 8 HOH 18 318 16 HOH HOH AAA . J 8 HOH 19 319 4 HOH HOH AAA . J 8 HOH 20 320 18 HOH HOH AAA . J 8 HOH 21 321 5 HOH HOH AAA . J 8 HOH 22 322 10 HOH HOH AAA . J 8 HOH 23 323 30 HOH HOH AAA . J 8 HOH 24 324 1 HOH HOH AAA . J 8 HOH 25 325 11 HOH HOH AAA . J 8 HOH 26 326 17 HOH HOH AAA . J 8 HOH 27 327 6 HOH HOH AAA . J 8 HOH 28 328 29 HOH HOH AAA . K 8 HOH 1 201 21 HOH HOH PPP . K 8 HOH 2 202 26 HOH HOH PPP . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id AAA _pdbx_unobs_or_zero_occ_atoms.auth_comp_id SER _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 145 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OG _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id SER _pdbx_unobs_or_zero_occ_atoms.label_seq_id 142 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OG # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6Y8K _cell.details ? _cell.formula_units_Z ? _cell.length_a 122.470 _cell.length_a_esd ? _cell.length_b 122.470 _cell.length_b_esd ? _cell.length_c 122.470 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Y8K _symmetry.cell_setting ? _symmetry.Int_Tables_number 208 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6Y8K _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.92 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 68.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.5 M lithium sulfate monohydrate, 0.1M sodium acetate trihydrate, pH 4.6' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 XE 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-11-28 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9763 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9763 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6Y8K _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.01 _reflns.d_resolution_low 40.857 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 21496 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 39.1 _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 45.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.043 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.01 _reflns_shell.d_res_low 2.05 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1053 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 2.216 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 2.244 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.756 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.000 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 0.000 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 0.000 _refine.B_iso_max ? _refine.B_iso_mean 63.013 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6Y8K _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.011 _refine.ls_d_res_low 40.857 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21467 _refine.ls_number_reflns_R_free 1070 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.851 _refine.ls_percent_reflns_R_free 4.984 _refine.ls_R_factor_all 0.285 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.3140 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2831 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6MI2 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.156 _refine.pdbx_overall_ESU_R_Free 0.152 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.011 _refine_hist.d_res_low 40.857 _refine_hist.number_atoms_solvent 30 _refine_hist.number_atoms_total 1144 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1072 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.013 1139 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.037 0.018 965 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.798 1.673 1530 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 2.464 1.595 2269 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 8.054 5.000 142 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 28.803 22.241 58 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.881 15.000 179 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 39.940 15.000 3 ? r_dihedral_angle_other_3_deg ? ? 'X-RAY DIFFRACTION' ? 11.678 15.000 7 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.076 0.200 143 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 1274 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 219 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.231 0.200 257 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.234 0.200 950 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.181 0.200 545 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.087 0.200 502 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.159 0.200 44 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.043 0.200 3 ? r_symmetry_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.204 0.200 5 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.278 0.200 26 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.150 0.200 2 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 6.076 6.366 578 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 6.070 6.365 577 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 8.164 9.517 716 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 8.158 9.517 717 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 7.120 7.129 561 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 7.113 7.127 562 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 9.773 10.485 814 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.767 10.484 815 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 12.360 77.362 1217 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 12.366 77.359 1215 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.011 2.063 . . 73 1488 99.8720 . . . 0.438 . 0.383 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.063 2.119 . . 62 1435 99.9332 . . . 0.460 . 0.380 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.119 2.181 . . 67 1401 99.9319 . . . 0.434 . 0.377 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.181 2.248 . . 59 1372 99.7908 . . . 0.449 . 0.421 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.248 2.322 . . 70 1317 99.4978 . . . 0.427 . 0.441 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.322 2.403 . . 68 1282 99.9260 . . . 0.486 . 0.416 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.403 2.494 . . 67 1224 99.8453 . . . 0.439 . 0.397 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.494 2.595 . . 72 1181 100.0000 . . . 0.444 . 0.377 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.595 2.711 . . 58 1167 100.0000 . . . 0.524 . 0.386 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.711 2.843 . . 55 1098 99.9133 . . . 0.419 . 0.363 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.843 2.997 . . 52 1048 99.6377 . . . 0.373 . 0.354 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.997 3.178 . . 57 994 99.9049 . . . 0.400 . 0.342 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.178 3.398 . . 61 939 99.9001 . . . 0.327 . 0.318 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.398 3.670 . . 55 874 100.0000 . . . 0.310 . 0.284 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.670 4.020 . . 48 819 100.0000 . . . 0.260 . 0.264 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.020 4.493 . . 30 756 100.0000 . . . 0.238 . 0.202 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.493 5.187 . . 39 669 100.0000 . . . 0.233 . 0.188 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.187 6.350 . . 40 571 100.0000 . . . 0.240 . 0.215 . . . . . . . . . . . 'X-RAY DIFFRACTION' 6.350 8.969 . . 23 469 100.0000 . . . 0.238 . 0.218 . . . . . . . . . . . 'X-RAY DIFFRACTION' 8.969 40.857 . . 14 293 97.4603 . . . 0.325 . 0.297 . . . . . . . . . . . # _struct.entry_id 6Y8K _struct.title 'Crystal structure of CD137 in complex with the cyclic peptide BCY10916' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6Y8K _struct_keywords.text 'TNFRSF9, CD137, 4-1BB, bicyclic peptide, Bicycle, BCY10916, SIGNALING PROTEIN' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 7 ? J N N 8 ? K N N 8 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP TNR9_HUMAN Q07011 ? 1 ;LQDPCSNCPAGTFCDNNRNQICSPCPPNSFSSAGGQRTCDICRQCKGVFRTRKECSSTSNAECDCTPGFHCLGAGCSMCE QDCKQGQELTKKGCKDCCFGTFNDQKRGICRPWTNCSLDGKSVLVNGTKERDVVCGP ; 24 2 PDB 6Y8K 6Y8K ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6Y8K AAA 21 ? 157 ? Q07011 24 ? 160 ? 24 160 2 2 6Y8K PPP 1 ? 15 ? 6Y8K 1 ? 15 ? 1 15 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6Y8K MET AAA 1 ? UNP Q07011 ? ? 'initiating methionine' 4 1 1 6Y8K VAL AAA 2 ? UNP Q07011 ? ? 'expression tag' 5 2 1 6Y8K SER AAA 3 ? UNP Q07011 ? ? 'expression tag' 6 3 1 6Y8K ALA AAA 4 ? UNP Q07011 ? ? 'expression tag' 7 4 1 6Y8K ILE AAA 5 ? UNP Q07011 ? ? 'expression tag' 8 5 1 6Y8K VAL AAA 6 ? UNP Q07011 ? ? 'expression tag' 9 6 1 6Y8K LEU AAA 7 ? UNP Q07011 ? ? 'expression tag' 10 7 1 6Y8K TYR AAA 8 ? UNP Q07011 ? ? 'expression tag' 11 8 1 6Y8K VAL AAA 9 ? UNP Q07011 ? ? 'expression tag' 12 9 1 6Y8K LEU AAA 10 ? UNP Q07011 ? ? 'expression tag' 13 10 1 6Y8K LEU AAA 11 ? UNP Q07011 ? ? 'expression tag' 14 11 1 6Y8K ALA AAA 12 ? UNP Q07011 ? ? 'expression tag' 15 12 1 6Y8K ALA AAA 13 ? UNP Q07011 ? ? 'expression tag' 16 13 1 6Y8K ALA AAA 14 ? UNP Q07011 ? ? 'expression tag' 17 14 1 6Y8K ALA AAA 15 ? UNP Q07011 ? ? 'expression tag' 18 15 1 6Y8K HIS AAA 16 ? UNP Q07011 ? ? 'expression tag' 19 16 1 6Y8K SER AAA 17 ? UNP Q07011 ? ? 'expression tag' 20 17 1 6Y8K ALA AAA 18 ? UNP Q07011 ? ? 'expression tag' 21 18 1 6Y8K PHE AAA 19 ? UNP Q07011 ? ? 'expression tag' 22 19 1 6Y8K ALA AAA 20 ? UNP Q07011 ? ? 'expression tag' 23 20 1 6Y8K SER AAA 118 ? UNP Q07011 CYS 121 conflict 121 21 1 6Y8K ASP AAA 135 ? UNP Q07011 ASN 138 conflict 138 22 1 6Y8K ASP AAA 146 ? UNP Q07011 ASN 149 conflict 149 23 1 6Y8K GLY AAA 158 ? UNP Q07011 ? ? 'expression tag' 161 24 1 6Y8K SER AAA 159 ? UNP Q07011 ? ? 'expression tag' 162 25 1 6Y8K HIS AAA 160 ? UNP Q07011 ? ? 'expression tag' 163 26 1 6Y8K HIS AAA 161 ? UNP Q07011 ? ? 'expression tag' 164 27 1 6Y8K HIS AAA 162 ? UNP Q07011 ? ? 'expression tag' 165 28 1 6Y8K HIS AAA 163 ? UNP Q07011 ? ? 'expression tag' 166 29 1 6Y8K HIS AAA 164 ? UNP Q07011 ? ? 'expression tag' 167 30 1 6Y8K HIS AAA 165 ? UNP Q07011 ? ? 'expression tag' 168 31 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2260 ? 1 MORE -42 ? 1 'SSA (A^2)' 9380 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 23 ? CYS A 28 ? ASP AAA 26 CYS AAA 31 5 ? 6 HELX_P HELX_P2 AA2 GLY A 93 ? CYS A 96 ? GLY AAA 96 CYS AAA 99 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 34 SG ? ? AAA CYS 28 AAA CYS 37 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf2 disulf ? ? A CYS 28 SG ? ? ? 1_555 A CYS 42 SG ? ? AAA CYS 31 AAA CYS 45 1_555 ? ? ? ? ? ? ? 2.070 ? ? disulf3 disulf ? ? A CYS 45 SG ? ? ? 1_555 A CYS 59 SG ? ? AAA CYS 48 AAA CYS 62 1_555 ? ? ? ? ? ? ? 1.987 ? ? disulf4 disulf ? ? A CYS 62 SG ? ? ? 1_555 A CYS 75 SG ? ? AAA CYS 65 AAA CYS 78 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf5 disulf ? ? A CYS 65 SG ? ? ? 1_555 A CYS 83 SG ? ? AAA CYS 68 AAA CYS 86 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf6 disulf ? ? A CYS 85 SG ? ? ? 1_555 A CYS 99 SG ? ? AAA CYS 88 AAA CYS 102 1_555 ? ? ? ? ? ? ? 2.016 ? ? disulf7 disulf ? ? A CYS 91 SG ? ? ? 1_555 A CYS 96 SG ? ? AAA CYS 94 AAA CYS 99 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf8 disulf ? ? A CYS 103 SG ? ? ? 1_555 A CYS 114 SG ? ? AAA CYS 106 AAA CYS 117 1_555 ? ? ? ? ? ? ? 2.050 ? ? disulf9 disulf ? ? A CYS 117 SG ? ? ? 1_555 A CYS 130 SG ? ? AAA CYS 120 AAA CYS 133 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf10 disulf ? ? A CYS 136 SG ? ? ? 1_555 A CYS 155 SG ? ? AAA CYS 139 AAA CYS 158 1_555 ? ? ? ? ? ? ? 2.057 ? ? covale1 covale none ? B CYS 1 SG ? ? ? 1_555 I 29N . C19 ? ? PPP CYS 1 PPP 29N 101 1_555 ? ? ? ? ? ? ? 1.623 ? ? covale2 covale none ? B CYS 8 SG ? ? ? 1_555 I 29N . C16 ? ? PPP CYS 8 PPP 29N 101 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale3 covale both ? B TYR 13 C ? ? ? 1_555 B NLE 14 N ? ? PPP TYR 13 PPP NLE 14 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale4 covale both ? B NLE 14 C ? ? ? 1_555 B CYS 15 N ? ? PPP NLE 14 PPP CYS 15 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale5 covale none ? B CYS 15 SG ? ? ? 1_555 I 29N . C25 ? ? PPP CYS 15 PPP 29N 101 1_555 ? ? ? ? ? ? ? 1.656 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 49 ? PHE A 50 ? SER AAA 52 PHE AAA 53 AA1 2 ASP A 60 ? ILE A 61 ? ASP AAA 63 ILE AAA 64 AA2 1 PHE A 69 ? LYS A 73 ? PHE AAA 72 LYS AAA 76 AA2 2 GLU A 82 ? CYS A 85 ? GLU AAA 85 CYS AAA 88 AA3 1 PHE A 89 ? LEU A 92 ? PHE AAA 92 LEU AAA 95 AA3 2 MET A 98 ? GLN A 101 ? MET AAA 101 GLN AAA 104 AA3 3 CYS B 8 ? ALA B 10 ? CYS PPP 8 ALA PPP 10 AA4 1 GLN A 107 ? THR A 110 ? GLN AAA 110 THR AAA 113 AA4 2 GLY A 113 ? ASP A 116 ? GLY AAA 116 ASP AAA 119 AA5 1 THR A 121 ? PHE A 122 ? THR AAA 124 PHE AAA 125 AA5 2 ARG A 131 ? PRO A 132 ? ARG AAA 134 PRO AAA 135 AA6 1 SER A 142 ? VAL A 145 ? SER AAA 145 VAL AAA 148 AA6 2 VAL A 154 ? GLY A 156 ? VAL AAA 157 GLY AAA 159 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 50 ? N PHE AAA 53 O ASP A 60 ? O ASP AAA 63 AA2 1 2 N ARG A 72 ? N ARG AAA 75 O GLU A 82 ? O GLU AAA 85 AA3 1 2 N HIS A 90 ? N HIS AAA 93 O GLU A 100 ? O GLU AAA 103 AA3 2 3 N CYS A 99 ? N CYS AAA 102 O PHE B 9 ? O PHE PPP 9 AA4 1 2 N THR A 110 ? N THR AAA 113 O GLY A 113 ? O GLY AAA 116 AA5 1 2 N PHE A 122 ? N PHE AAA 125 O ARG A 131 ? O ARG AAA 134 AA6 1 2 N SER A 142 ? N SER AAA 145 O GLY A 156 ? O GLY AAA 159 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 SG PPP CYS 1 ? ? H17 PPP 29N 101 ? ? 0.83 2 1 H AAA GLN 59 ? ? O AAA HOH 301 ? ? 1.56 3 1 H AAA GLN 67 ? ? O AAA HOH 303 ? ? 1.59 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 AAA _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 302 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 AAA _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 302 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 18_554 _pdbx_validate_symm_contact.dist 1.44 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO AAA 49 ? ? -55.92 170.54 2 1 ASP AAA 87 ? ? -110.95 -157.12 3 1 ALA AAA 97 ? ? -33.61 112.19 4 1 TRP AAA 136 ? ? -46.57 157.77 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id AAA _pdbx_struct_special_symmetry.auth_comp_id NA _pdbx_struct_special_symmetry.auth_seq_id 206 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id NA _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_entry_details.entry_id 6Y8K _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 AAA MET 4 ? A MET 1 2 1 Y 1 AAA VAL 5 ? A VAL 2 3 1 Y 1 AAA SER 6 ? A SER 3 4 1 Y 1 AAA ALA 7 ? A ALA 4 5 1 Y 1 AAA ILE 8 ? A ILE 5 6 1 Y 1 AAA VAL 9 ? A VAL 6 7 1 Y 1 AAA LEU 10 ? A LEU 7 8 1 Y 1 AAA TYR 11 ? A TYR 8 9 1 Y 1 AAA VAL 12 ? A VAL 9 10 1 Y 1 AAA LEU 13 ? A LEU 10 11 1 Y 1 AAA LEU 14 ? A LEU 11 12 1 Y 1 AAA ALA 15 ? A ALA 12 13 1 Y 1 AAA ALA 16 ? A ALA 13 14 1 Y 1 AAA ALA 17 ? A ALA 14 15 1 Y 1 AAA ALA 18 ? A ALA 15 16 1 Y 1 AAA HIS 19 ? A HIS 16 17 1 Y 1 AAA SER 20 ? A SER 17 18 1 Y 1 AAA ALA 21 ? A ALA 18 19 1 Y 1 AAA PHE 22 ? A PHE 19 20 1 Y 1 AAA ALA 23 ? A ALA 20 21 1 Y 1 AAA LEU 24 ? A LEU 21 22 1 Y 1 AAA GLN 25 ? A GLN 22 23 1 Y 1 AAA ASN 39 ? A ASN 36 24 1 Y 1 AAA ASN 40 ? A ASN 37 25 1 Y 1 AAA ARG 41 ? A ARG 38 26 1 Y 1 AAA ASN 42 ? A ASN 39 27 1 Y 1 AAA GLN 43 ? A GLN 40 28 1 Y 1 AAA GLY 161 ? A GLY 158 29 1 Y 1 AAA SER 162 ? A SER 159 30 1 Y 1 AAA HIS 163 ? A HIS 160 31 1 Y 1 AAA HIS 164 ? A HIS 161 32 1 Y 1 AAA HIS 165 ? A HIS 162 33 1 Y 1 AAA HIS 166 ? A HIS 163 34 1 Y 1 AAA HIS 167 ? A HIS 164 35 1 Y 1 AAA HIS 168 ? A HIS 165 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 29N N1 N N N 1 29N C2 C N N 2 29N N3 N N N 3 29N C4 C N N 4 29N N5 N N N 5 29N C6 C N N 6 29N C7 C N N 7 29N C8 C N N 8 29N O9 O N N 9 29N C10 C N N 10 29N C11 C N N 11 29N O12 O N N 12 29N C13 C N N 13 29N C14 C N N 14 29N O15 O N N 15 29N C16 C N N 16 29N C19 C N N 17 29N C25 C N N 18 29N H1 H N N 19 29N H2 H N N 20 29N H3 H N N 21 29N H4 H N N 22 29N H5 H N N 23 29N H6 H N N 24 29N H7 H N N 25 29N H8 H N N 26 29N H9 H N N 27 29N H10 H N N 28 29N H11 H N N 29 29N H12 H N N 30 29N H13 H N N 31 29N H14 H N N 32 29N H15 H N N 33 29N H16 H N N 34 29N H17 H N N 35 29N H18 H N N 36 29N H19 H N N 37 29N H20 H N N 38 29N H21 H N N 39 ACT C C N N 40 ACT O O N N 41 ACT OXT O N N 42 ACT CH3 C N N 43 ACT H1 H N N 44 ACT H2 H N N 45 ACT H3 H N N 46 ALA N N N N 47 ALA CA C N S 48 ALA C C N N 49 ALA O O N N 50 ALA CB C N N 51 ALA OXT O N N 52 ALA H H N N 53 ALA H2 H N N 54 ALA HA H N N 55 ALA HB1 H N N 56 ALA HB2 H N N 57 ALA HB3 H N N 58 ALA HXT H N N 59 ARG N N N N 60 ARG CA C N S 61 ARG C C N N 62 ARG O O N N 63 ARG CB C N N 64 ARG CG C N N 65 ARG CD C N N 66 ARG NE N N N 67 ARG CZ C N N 68 ARG NH1 N N N 69 ARG NH2 N N N 70 ARG OXT O N N 71 ARG H H N N 72 ARG H2 H N N 73 ARG HA H N N 74 ARG HB2 H N N 75 ARG HB3 H N N 76 ARG HG2 H N N 77 ARG HG3 H N N 78 ARG HD2 H N N 79 ARG HD3 H N N 80 ARG HE H N N 81 ARG HH11 H N N 82 ARG HH12 H N N 83 ARG HH21 H N N 84 ARG HH22 H N N 85 ARG HXT H N N 86 ASN N N N N 87 ASN CA C N S 88 ASN C C N N 89 ASN O O N N 90 ASN CB C N N 91 ASN CG C N N 92 ASN OD1 O N N 93 ASN ND2 N N N 94 ASN OXT O N N 95 ASN H H N N 96 ASN H2 H N N 97 ASN HA H N N 98 ASN HB2 H N N 99 ASN HB3 H N N 100 ASN HD21 H N N 101 ASN HD22 H N N 102 ASN HXT H N N 103 ASP N N N N 104 ASP CA C N S 105 ASP C C N N 106 ASP O O N N 107 ASP CB C N N 108 ASP CG C N N 109 ASP OD1 O N N 110 ASP OD2 O N N 111 ASP OXT O N N 112 ASP H H N N 113 ASP H2 H N N 114 ASP HA H N N 115 ASP HB2 H N N 116 ASP HB3 H N N 117 ASP HD2 H N N 118 ASP HXT H N N 119 CYS N N N N 120 CYS CA C N R 121 CYS C C N N 122 CYS O O N N 123 CYS CB C N N 124 CYS SG S N N 125 CYS OXT O N N 126 CYS H H N N 127 CYS H2 H N N 128 CYS HA H N N 129 CYS HB2 H N N 130 CYS HB3 H N N 131 CYS HG H N N 132 CYS HXT H N N 133 EDO C1 C N N 134 EDO O1 O N N 135 EDO C2 C N N 136 EDO O2 O N N 137 EDO H11 H N N 138 EDO H12 H N N 139 EDO HO1 H N N 140 EDO H21 H N N 141 EDO H22 H N N 142 EDO HO2 H N N 143 GLN N N N N 144 GLN CA C N S 145 GLN C C N N 146 GLN O O N N 147 GLN CB C N N 148 GLN CG C N N 149 GLN CD C N N 150 GLN OE1 O N N 151 GLN NE2 N N N 152 GLN OXT O N N 153 GLN H H N N 154 GLN H2 H N N 155 GLN HA H N N 156 GLN HB2 H N N 157 GLN HB3 H N N 158 GLN HG2 H N N 159 GLN HG3 H N N 160 GLN HE21 H N N 161 GLN HE22 H N N 162 GLN HXT H N N 163 GLU N N N N 164 GLU CA C N S 165 GLU C C N N 166 GLU O O N N 167 GLU CB C N N 168 GLU CG C N N 169 GLU CD C N N 170 GLU OE1 O N N 171 GLU OE2 O N N 172 GLU OXT O N N 173 GLU H H N N 174 GLU H2 H N N 175 GLU HA H N N 176 GLU HB2 H N N 177 GLU HB3 H N N 178 GLU HG2 H N N 179 GLU HG3 H N N 180 GLU HE2 H N N 181 GLU HXT H N N 182 GLY N N N N 183 GLY CA C N N 184 GLY C C N N 185 GLY O O N N 186 GLY OXT O N N 187 GLY H H N N 188 GLY H2 H N N 189 GLY HA2 H N N 190 GLY HA3 H N N 191 GLY HXT H N N 192 HIS N N N N 193 HIS CA C N S 194 HIS C C N N 195 HIS O O N N 196 HIS CB C N N 197 HIS CG C Y N 198 HIS ND1 N Y N 199 HIS CD2 C Y N 200 HIS CE1 C Y N 201 HIS NE2 N Y N 202 HIS OXT O N N 203 HIS H H N N 204 HIS H2 H N N 205 HIS HA H N N 206 HIS HB2 H N N 207 HIS HB3 H N N 208 HIS HD1 H N N 209 HIS HD2 H N N 210 HIS HE1 H N N 211 HIS HE2 H N N 212 HIS HXT H N N 213 HOH O O N N 214 HOH H1 H N N 215 HOH H2 H N N 216 ILE N N N N 217 ILE CA C N S 218 ILE C C N N 219 ILE O O N N 220 ILE CB C N S 221 ILE CG1 C N N 222 ILE CG2 C N N 223 ILE CD1 C N N 224 ILE OXT O N N 225 ILE H H N N 226 ILE H2 H N N 227 ILE HA H N N 228 ILE HB H N N 229 ILE HG12 H N N 230 ILE HG13 H N N 231 ILE HG21 H N N 232 ILE HG22 H N N 233 ILE HG23 H N N 234 ILE HD11 H N N 235 ILE HD12 H N N 236 ILE HD13 H N N 237 ILE HXT H N N 238 LEU N N N N 239 LEU CA C N S 240 LEU C C N N 241 LEU O O N N 242 LEU CB C N N 243 LEU CG C N N 244 LEU CD1 C N N 245 LEU CD2 C N N 246 LEU OXT O N N 247 LEU H H N N 248 LEU H2 H N N 249 LEU HA H N N 250 LEU HB2 H N N 251 LEU HB3 H N N 252 LEU HG H N N 253 LEU HD11 H N N 254 LEU HD12 H N N 255 LEU HD13 H N N 256 LEU HD21 H N N 257 LEU HD22 H N N 258 LEU HD23 H N N 259 LEU HXT H N N 260 LYS N N N N 261 LYS CA C N S 262 LYS C C N N 263 LYS O O N N 264 LYS CB C N N 265 LYS CG C N N 266 LYS CD C N N 267 LYS CE C N N 268 LYS NZ N N N 269 LYS OXT O N N 270 LYS H H N N 271 LYS H2 H N N 272 LYS HA H N N 273 LYS HB2 H N N 274 LYS HB3 H N N 275 LYS HG2 H N N 276 LYS HG3 H N N 277 LYS HD2 H N N 278 LYS HD3 H N N 279 LYS HE2 H N N 280 LYS HE3 H N N 281 LYS HZ1 H N N 282 LYS HZ2 H N N 283 LYS HZ3 H N N 284 LYS HXT H N N 285 MET N N N N 286 MET CA C N S 287 MET C C N N 288 MET O O N N 289 MET CB C N N 290 MET CG C N N 291 MET SD S N N 292 MET CE C N N 293 MET OXT O N N 294 MET H H N N 295 MET H2 H N N 296 MET HA H N N 297 MET HB2 H N N 298 MET HB3 H N N 299 MET HG2 H N N 300 MET HG3 H N N 301 MET HE1 H N N 302 MET HE2 H N N 303 MET HE3 H N N 304 MET HXT H N N 305 NA NA NA N N 306 NLE N N N N 307 NLE CA C N S 308 NLE C C N N 309 NLE O O N N 310 NLE OXT O N N 311 NLE CB C N N 312 NLE CG C N N 313 NLE CD C N N 314 NLE CE C N N 315 NLE H H N N 316 NLE H2 H N N 317 NLE HA H N N 318 NLE HXT H N N 319 NLE HB2 H N N 320 NLE HB3 H N N 321 NLE HG2 H N N 322 NLE HG3 H N N 323 NLE HD2 H N N 324 NLE HD3 H N N 325 NLE HE1 H N N 326 NLE HE2 H N N 327 NLE HE3 H N N 328 PHE N N N N 329 PHE CA C N S 330 PHE C C N N 331 PHE O O N N 332 PHE CB C N N 333 PHE CG C Y N 334 PHE CD1 C Y N 335 PHE CD2 C Y N 336 PHE CE1 C Y N 337 PHE CE2 C Y N 338 PHE CZ C Y N 339 PHE OXT O N N 340 PHE H H N N 341 PHE H2 H N N 342 PHE HA H N N 343 PHE HB2 H N N 344 PHE HB3 H N N 345 PHE HD1 H N N 346 PHE HD2 H N N 347 PHE HE1 H N N 348 PHE HE2 H N N 349 PHE HZ H N N 350 PHE HXT H N N 351 PRO N N N N 352 PRO CA C N S 353 PRO C C N N 354 PRO O O N N 355 PRO CB C N N 356 PRO CG C N N 357 PRO CD C N N 358 PRO OXT O N N 359 PRO H H N N 360 PRO HA H N N 361 PRO HB2 H N N 362 PRO HB3 H N N 363 PRO HG2 H N N 364 PRO HG3 H N N 365 PRO HD2 H N N 366 PRO HD3 H N N 367 PRO HXT H N N 368 SER N N N N 369 SER CA C N S 370 SER C C N N 371 SER O O N N 372 SER CB C N N 373 SER OG O N N 374 SER OXT O N N 375 SER H H N N 376 SER H2 H N N 377 SER HA H N N 378 SER HB2 H N N 379 SER HB3 H N N 380 SER HG H N N 381 SER HXT H N N 382 SO4 S S N N 383 SO4 O1 O N N 384 SO4 O2 O N N 385 SO4 O3 O N N 386 SO4 O4 O N N 387 THR N N N N 388 THR CA C N S 389 THR C C N N 390 THR O O N N 391 THR CB C N R 392 THR OG1 O N N 393 THR CG2 C N N 394 THR OXT O N N 395 THR H H N N 396 THR H2 H N N 397 THR HA H N N 398 THR HB H N N 399 THR HG1 H N N 400 THR HG21 H N N 401 THR HG22 H N N 402 THR HG23 H N N 403 THR HXT H N N 404 TRP N N N N 405 TRP CA C N S 406 TRP C C N N 407 TRP O O N N 408 TRP CB C N N 409 TRP CG C Y N 410 TRP CD1 C Y N 411 TRP CD2 C Y N 412 TRP NE1 N Y N 413 TRP CE2 C Y N 414 TRP CE3 C Y N 415 TRP CZ2 C Y N 416 TRP CZ3 C Y N 417 TRP CH2 C Y N 418 TRP OXT O N N 419 TRP H H N N 420 TRP H2 H N N 421 TRP HA H N N 422 TRP HB2 H N N 423 TRP HB3 H N N 424 TRP HD1 H N N 425 TRP HE1 H N N 426 TRP HE3 H N N 427 TRP HZ2 H N N 428 TRP HZ3 H N N 429 TRP HH2 H N N 430 TRP HXT H N N 431 TYR N N N N 432 TYR CA C N S 433 TYR C C N N 434 TYR O O N N 435 TYR CB C N N 436 TYR CG C Y N 437 TYR CD1 C Y N 438 TYR CD2 C Y N 439 TYR CE1 C Y N 440 TYR CE2 C Y N 441 TYR CZ C Y N 442 TYR OH O N N 443 TYR OXT O N N 444 TYR H H N N 445 TYR H2 H N N 446 TYR HA H N N 447 TYR HB2 H N N 448 TYR HB3 H N N 449 TYR HD1 H N N 450 TYR HD2 H N N 451 TYR HE1 H N N 452 TYR HE2 H N N 453 TYR HH H N N 454 TYR HXT H N N 455 VAL N N N N 456 VAL CA C N S 457 VAL C C N N 458 VAL O O N N 459 VAL CB C N N 460 VAL CG1 C N N 461 VAL CG2 C N N 462 VAL OXT O N N 463 VAL H H N N 464 VAL H2 H N N 465 VAL HA H N N 466 VAL HB H N N 467 VAL HG11 H N N 468 VAL HG12 H N N 469 VAL HG13 H N N 470 VAL HG21 H N N 471 VAL HG22 H N N 472 VAL HG23 H N N 473 VAL HXT H N N 474 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 29N C25 C14 sing N N 1 29N O15 C13 doub N N 2 29N C14 C13 sing N N 3 29N C13 N3 sing N N 4 29N C16 C8 sing N N 5 29N C8 C7 sing N N 6 29N N3 C2 sing N N 7 29N N3 C4 sing N N 8 29N C2 N1 sing N N 9 29N C7 N1 sing N N 10 29N C7 O9 doub N N 11 29N N1 C6 sing N N 12 29N C4 N5 sing N N 13 29N C19 C11 sing N N 14 29N N5 C6 sing N N 15 29N N5 C10 sing N N 16 29N C11 C10 sing N N 17 29N C10 O12 doub N N 18 29N C2 H1 sing N N 19 29N C2 H2 sing N N 20 29N C4 H3 sing N N 21 29N C4 H4 sing N N 22 29N C6 H5 sing N N 23 29N C6 H6 sing N N 24 29N C8 H7 sing N N 25 29N C8 H8 sing N N 26 29N C11 H9 sing N N 27 29N C11 H10 sing N N 28 29N C14 H11 sing N N 29 29N C14 H12 sing N N 30 29N C16 H13 sing N N 31 29N C16 H14 sing N N 32 29N C16 H15 sing N N 33 29N C19 H16 sing N N 34 29N C19 H17 sing N N 35 29N C19 H18 sing N N 36 29N C25 H19 sing N N 37 29N C25 H20 sing N N 38 29N C25 H21 sing N N 39 ACT C O doub N N 40 ACT C OXT sing N N 41 ACT C CH3 sing N N 42 ACT CH3 H1 sing N N 43 ACT CH3 H2 sing N N 44 ACT CH3 H3 sing N N 45 ALA N CA sing N N 46 ALA N H sing N N 47 ALA N H2 sing N N 48 ALA CA C sing N N 49 ALA CA CB sing N N 50 ALA CA HA sing N N 51 ALA C O doub N N 52 ALA C OXT sing N N 53 ALA CB HB1 sing N N 54 ALA CB HB2 sing N N 55 ALA CB HB3 sing N N 56 ALA OXT HXT sing N N 57 ARG N CA sing N N 58 ARG N H sing N N 59 ARG N H2 sing N N 60 ARG CA C sing N N 61 ARG CA CB sing N N 62 ARG CA HA sing N N 63 ARG C O doub N N 64 ARG C OXT sing N N 65 ARG CB CG sing N N 66 ARG CB HB2 sing N N 67 ARG CB HB3 sing N N 68 ARG CG CD sing N N 69 ARG CG HG2 sing N N 70 ARG CG HG3 sing N N 71 ARG CD NE sing N N 72 ARG CD HD2 sing N N 73 ARG CD HD3 sing N N 74 ARG NE CZ sing N N 75 ARG NE HE sing N N 76 ARG CZ NH1 sing N N 77 ARG CZ NH2 doub N N 78 ARG NH1 HH11 sing N N 79 ARG NH1 HH12 sing N N 80 ARG NH2 HH21 sing N N 81 ARG NH2 HH22 sing N N 82 ARG OXT HXT sing N N 83 ASN N CA sing N N 84 ASN N H sing N N 85 ASN N H2 sing N N 86 ASN CA C sing N N 87 ASN CA CB sing N N 88 ASN CA HA sing N N 89 ASN C O doub N N 90 ASN C OXT sing N N 91 ASN CB CG sing N N 92 ASN CB HB2 sing N N 93 ASN CB HB3 sing N N 94 ASN CG OD1 doub N N 95 ASN CG ND2 sing N N 96 ASN ND2 HD21 sing N N 97 ASN ND2 HD22 sing N N 98 ASN OXT HXT sing N N 99 ASP N CA sing N N 100 ASP N H sing N N 101 ASP N H2 sing N N 102 ASP CA C sing N N 103 ASP CA CB sing N N 104 ASP CA HA sing N N 105 ASP C O doub N N 106 ASP C OXT sing N N 107 ASP CB CG sing N N 108 ASP CB HB2 sing N N 109 ASP CB HB3 sing N N 110 ASP CG OD1 doub N N 111 ASP CG OD2 sing N N 112 ASP OD2 HD2 sing N N 113 ASP OXT HXT sing N N 114 CYS N CA sing N N 115 CYS N H sing N N 116 CYS N H2 sing N N 117 CYS CA C sing N N 118 CYS CA CB sing N N 119 CYS CA HA sing N N 120 CYS C O doub N N 121 CYS C OXT sing N N 122 CYS CB SG sing N N 123 CYS CB HB2 sing N N 124 CYS CB HB3 sing N N 125 CYS SG HG sing N N 126 CYS OXT HXT sing N N 127 EDO C1 O1 sing N N 128 EDO C1 C2 sing N N 129 EDO C1 H11 sing N N 130 EDO C1 H12 sing N N 131 EDO O1 HO1 sing N N 132 EDO C2 O2 sing N N 133 EDO C2 H21 sing N N 134 EDO C2 H22 sing N N 135 EDO O2 HO2 sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 NLE N CA sing N N 291 NLE N H sing N N 292 NLE N H2 sing N N 293 NLE CA C sing N N 294 NLE CA CB sing N N 295 NLE CA HA sing N N 296 NLE C O doub N N 297 NLE C OXT sing N N 298 NLE OXT HXT sing N N 299 NLE CB CG sing N N 300 NLE CB HB2 sing N N 301 NLE CB HB3 sing N N 302 NLE CG CD sing N N 303 NLE CG HG2 sing N N 304 NLE CG HG3 sing N N 305 NLE CD CE sing N N 306 NLE CD HD2 sing N N 307 NLE CD HD3 sing N N 308 NLE CE HE1 sing N N 309 NLE CE HE2 sing N N 310 NLE CE HE3 sing N N 311 PHE N CA sing N N 312 PHE N H sing N N 313 PHE N H2 sing N N 314 PHE CA C sing N N 315 PHE CA CB sing N N 316 PHE CA HA sing N N 317 PHE C O doub N N 318 PHE C OXT sing N N 319 PHE CB CG sing N N 320 PHE CB HB2 sing N N 321 PHE CB HB3 sing N N 322 PHE CG CD1 doub Y N 323 PHE CG CD2 sing Y N 324 PHE CD1 CE1 sing Y N 325 PHE CD1 HD1 sing N N 326 PHE CD2 CE2 doub Y N 327 PHE CD2 HD2 sing N N 328 PHE CE1 CZ doub Y N 329 PHE CE1 HE1 sing N N 330 PHE CE2 CZ sing Y N 331 PHE CE2 HE2 sing N N 332 PHE CZ HZ sing N N 333 PHE OXT HXT sing N N 334 PRO N CA sing N N 335 PRO N CD sing N N 336 PRO N H sing N N 337 PRO CA C sing N N 338 PRO CA CB sing N N 339 PRO CA HA sing N N 340 PRO C O doub N N 341 PRO C OXT sing N N 342 PRO CB CG sing N N 343 PRO CB HB2 sing N N 344 PRO CB HB3 sing N N 345 PRO CG CD sing N N 346 PRO CG HG2 sing N N 347 PRO CG HG3 sing N N 348 PRO CD HD2 sing N N 349 PRO CD HD3 sing N N 350 PRO OXT HXT sing N N 351 SER N CA sing N N 352 SER N H sing N N 353 SER N H2 sing N N 354 SER CA C sing N N 355 SER CA CB sing N N 356 SER CA HA sing N N 357 SER C O doub N N 358 SER C OXT sing N N 359 SER CB OG sing N N 360 SER CB HB2 sing N N 361 SER CB HB3 sing N N 362 SER OG HG sing N N 363 SER OXT HXT sing N N 364 SO4 S O1 doub N N 365 SO4 S O2 doub N N 366 SO4 S O3 sing N N 367 SO4 S O4 sing N N 368 THR N CA sing N N 369 THR N H sing N N 370 THR N H2 sing N N 371 THR CA C sing N N 372 THR CA CB sing N N 373 THR CA HA sing N N 374 THR C O doub N N 375 THR C OXT sing N N 376 THR CB OG1 sing N N 377 THR CB CG2 sing N N 378 THR CB HB sing N N 379 THR OG1 HG1 sing N N 380 THR CG2 HG21 sing N N 381 THR CG2 HG22 sing N N 382 THR CG2 HG23 sing N N 383 THR OXT HXT sing N N 384 TRP N CA sing N N 385 TRP N H sing N N 386 TRP N H2 sing N N 387 TRP CA C sing N N 388 TRP CA CB sing N N 389 TRP CA HA sing N N 390 TRP C O doub N N 391 TRP C OXT sing N N 392 TRP CB CG sing N N 393 TRP CB HB2 sing N N 394 TRP CB HB3 sing N N 395 TRP CG CD1 doub Y N 396 TRP CG CD2 sing Y N 397 TRP CD1 NE1 sing Y N 398 TRP CD1 HD1 sing N N 399 TRP CD2 CE2 doub Y N 400 TRP CD2 CE3 sing Y N 401 TRP NE1 CE2 sing Y N 402 TRP NE1 HE1 sing N N 403 TRP CE2 CZ2 sing Y N 404 TRP CE3 CZ3 doub Y N 405 TRP CE3 HE3 sing N N 406 TRP CZ2 CH2 doub Y N 407 TRP CZ2 HZ2 sing N N 408 TRP CZ3 CH2 sing Y N 409 TRP CZ3 HZ3 sing N N 410 TRP CH2 HH2 sing N N 411 TRP OXT HXT sing N N 412 TYR N CA sing N N 413 TYR N H sing N N 414 TYR N H2 sing N N 415 TYR CA C sing N N 416 TYR CA CB sing N N 417 TYR CA HA sing N N 418 TYR C O doub N N 419 TYR C OXT sing N N 420 TYR CB CG sing N N 421 TYR CB HB2 sing N N 422 TYR CB HB3 sing N N 423 TYR CG CD1 doub Y N 424 TYR CG CD2 sing Y N 425 TYR CD1 CE1 sing Y N 426 TYR CD1 HD1 sing N N 427 TYR CD2 CE2 doub Y N 428 TYR CD2 HD2 sing N N 429 TYR CE1 CZ doub Y N 430 TYR CE1 HE1 sing N N 431 TYR CE2 CZ sing Y N 432 TYR CE2 HE2 sing N N 433 TYR CZ OH sing N N 434 TYR OH HH sing N N 435 TYR OXT HXT sing N N 436 VAL N CA sing N N 437 VAL N H sing N N 438 VAL N H2 sing N N 439 VAL CA C sing N N 440 VAL CA CB sing N N 441 VAL CA HA sing N N 442 VAL C O doub N N 443 VAL C OXT sing N N 444 VAL CB CG1 sing N N 445 VAL CB CG2 sing N N 446 VAL CB HB sing N N 447 VAL CG1 HG11 sing N N 448 VAL CG1 HG12 sing N N 449 VAL CG1 HG13 sing N N 450 VAL CG2 HG21 sing N N 451 VAL CG2 HG22 sing N N 452 VAL CG2 HG23 sing N N 453 VAL OXT HXT sing N N 454 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 29N _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 29N _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6MI2 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6Y8K _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008165 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008165 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008165 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 NA 11 11 4.766 3.285 3.176 8.842 1.268 0.314 1.114 129.424 0.733 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 1.049 # loop_