HEADER DNA BINDING PROTEIN 06-MAR-20 6Y93 TITLE CRYSTAL STRUCTURE OF THE DNA-BINDING DOMAIN OF THE NUCLEOID OCCLUSION TITLE 2 FACTOR (NOC) COMPLEXED TO THE NOC-BINDING SITE (NBS) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOID OCCLUSION PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NOC; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE EXPRESSED PROTEIN COMPRISED RESIDUES 111-242 OF COMPND 7 THE WILD-TYPE SEQUENCE WITH AN ADDITIONAL N-TERMINAL MET RESIDUE AND COMPND 8 A C-TERMINAL NICKEL AFFINITY TAG OF SEQUENCE KLAAALEHHHHHH FROM THE COMPND 9 PET21B EXPRESSION PLASMID; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: NOC BINDING SITE (NBS); COMPND 12 CHAIN: C, D; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: CHAINS C AND D FORM A SYMMETRICAL DNA DUPLEX WHICH IS COMPND 15 SIMILAR TO THE NOC BINDING SITE (NBS) SEQUENCE FROM BACILLUS SUBTILIS COMPND 16 WITHOUT 5' PHOSPHATES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS (STRAIN 168); SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 GENE: NOC, YYAA, BSU40990; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: SOLU; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630 KEYWDS CHROMOSOME SEGREGATION, CHROMOSOME MAINTENANCE, PROTEIN-DNA KEYWDS 2 RECOGNITION, EVOLUTION, DNA-BINDING PROTEIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.S.B.JALAL,N.T.TRAN,C.E.M.STEVENSON,E.CHAN,R.LO,X.TAN,A.NOY, AUTHOR 2 D.M.LAWSON,T.B.K.LE REVDAT 2 24-JAN-24 6Y93 1 REMARK REVDAT 1 05-AUG-20 6Y93 0 JRNL AUTH A.S.B.JALAL,N.T.TRAN,C.E.STEVENSON,E.W.CHAN,R.LO,X.TAN, JRNL AUTH 2 A.NOY,D.M.LAWSON,T.B.K.LE JRNL TITL DIVERSIFICATION OF DNA-BINDING SPECIFICITY BY PERMISSIVE AND JRNL TITL 2 SPECIFICITY-SWITCHING MUTATIONS IN THE PARB/NOC PROTEIN JRNL TITL 3 FAMILY. JRNL REF CELL REP V. 32 07928 2020 JRNL REFN ESSN 2211-1247 JRNL PMID 32698006 JRNL DOI 10.1016/J.CELREP.2020.107928 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 38.1 REMARK 3 NUMBER OF REFLECTIONS : 10231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.500 REMARK 3 FREE R VALUE TEST SET COUNT : 599 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.23 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.29 REMARK 3 REFLECTION IN BIN (WORKING SET) : 10 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 0.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.5720 REMARK 3 BIN FREE R VALUE SET COUNT : 2 REMARK 3 BIN FREE R VALUE : 0.1820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1695 REMARK 3 NUCLEIC ACID ATOMS : 896 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 140.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.61000 REMARK 3 B22 (A**2) : 4.15000 REMARK 3 B33 (A**2) : -5.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.99000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.441 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.385 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2713 ; 0.002 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2180 ; 0.001 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3859 ; 1.027 ; 1.454 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5085 ; 1.171 ; 1.901 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 219 ; 4.404 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;30.492 ;24.074 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 333 ;17.903 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;23.849 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 374 ; 0.040 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2391 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 497 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 126 227 B 126 227 3047 0.120 0.050 REMARK 3 2 C 1 22 D 1 22 2042 0.010 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 126 A 230 REMARK 3 ORIGIN FOR THE GROUP (A): 34.7992 -16.5363 19.4295 REMARK 3 T TENSOR REMARK 3 T11: 0.3284 T22: 0.2516 REMARK 3 T33: 0.3859 T12: 0.1493 REMARK 3 T13: -0.0180 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 3.7623 L22: 2.2971 REMARK 3 L33: 5.9260 L12: 2.1721 REMARK 3 L13: -1.5169 L23: -0.7574 REMARK 3 S TENSOR REMARK 3 S11: -0.0646 S12: 0.1738 S13: 0.1311 REMARK 3 S21: -0.0896 S22: 0.0612 S23: 0.3837 REMARK 3 S31: 0.4131 S32: -0.1053 S33: 0.0034 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 113 B 228 REMARK 3 ORIGIN FOR THE GROUP (A): 21.8975 14.7062 14.2024 REMARK 3 T TENSOR REMARK 3 T11: 0.3399 T22: 0.1696 REMARK 3 T33: 0.3082 T12: 0.1631 REMARK 3 T13: 0.0258 T23: 0.0791 REMARK 3 L TENSOR REMARK 3 L11: 5.9871 L22: 4.1177 REMARK 3 L33: 5.4001 L12: 1.9247 REMARK 3 L13: 1.9601 L23: 1.4074 REMARK 3 S TENSOR REMARK 3 S11: -0.0238 S12: 0.3291 S13: -0.0414 REMARK 3 S21: -0.3208 S22: 0.1219 S23: -0.2615 REMARK 3 S31: -0.3192 S32: -0.0446 S33: -0.0981 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 22 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8438 0.1367 23.2730 REMARK 3 T TENSOR REMARK 3 T11: 0.1091 T22: 0.2822 REMARK 3 T33: 0.3045 T12: 0.1442 REMARK 3 T13: -0.0061 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 8.4777 L22: 3.6344 REMARK 3 L33: 1.1144 L12: -4.7845 REMARK 3 L13: -0.5832 L23: 0.2597 REMARK 3 S TENSOR REMARK 3 S11: -0.4843 S12: 0.0828 S13: -0.0039 REMARK 3 S21: 0.4545 S22: 0.2883 S23: 0.1103 REMARK 3 S31: 0.0642 S32: -0.0159 S33: 0.1960 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 22 REMARK 3 ORIGIN FOR THE GROUP (A): 28.2346 0.0668 23.3334 REMARK 3 T TENSOR REMARK 3 T11: 0.0979 T22: 0.3831 REMARK 3 T33: 0.3165 T12: 0.1476 REMARK 3 T13: 0.0022 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 7.7830 L22: 3.5761 REMARK 3 L33: 1.1261 L12: -4.3443 REMARK 3 L13: -0.4012 L23: 0.1862 REMARK 3 S TENSOR REMARK 3 S11: -0.4874 S12: 0.1137 S13: -0.0943 REMARK 3 S21: 0.4518 S22: 0.3869 S23: -0.0169 REMARK 3 S31: -0.0283 S32: 0.0125 S33: 0.1005 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES: WITH TLS ADDED REMARK 3 THIS STRUCTURE WAS REFINED AFTER APPLYING AN ANISOTROPIC REMARK 3 CORRECTION TO THE DATA WITH STARANISO. IN LINE WITH THE REMARK 3 RECOMMENDATIONS OF THE PDB AND THE STARANISO WEBPAGES, THE REMARK 3 UPLOADED DATA CIF FILE CONTAINS THREE DATA BLOCKS: 1. THE REMARK 3 STARANISO CORRECTED DATA THAT WAS USED TO REFINE THE STRUCTURE, 2. REMARK 3 THE FULL UNCORRECTED DATASET WITH NO RESOLUTION CUT-OFF APPLIED, REMARK 3 3. THE OUTPUT FROM REFMAC5 WITH FILLED-IN DATA REMOVED TO LEAVE REMARK 3 ONLY THE REFLECTIONS THAT WERE OBSERVED WITHIN THE ELLIPSOIDAL REMARK 3 RESOLUTION CUT-OFF. THE LATTER CONTAINS BLURRED MAP COEFFICIENTS REMARK 3 THAT SHOULD ENABLE REPRODUCTION OF THE MAPS THAT WERE USED TO REMARK 3 EVALUATE THE MODEL. N.B. THE ANISOTROPIC CORRECTION LEADS TO POOR REMARK 3 COMPLETENESS IN THE HIGHER SPHERICAL RESOLUTION SHELLS RESULTING REMARK 3 IN MAPS THAT APPEAR TO BE AT LOWER RESOLUTION THAN THE 2.23 ANG REMARK 3 MAXIMUM RESOLUTION OF THE CORRECTED DATA. SINCE THE RFREE AND RSRZ REMARK 3 SCORES WHICH EVALUATE THE FIT OF THE MODEL TO THE DATA ARE REMARK 3 DEPENDENT ON THE MAXIMUM REPORTED RESOLUTION, THEY ARE INEVITABLY REMARK 3 POOR FOR THIS MODEL. ALSO NOTE THAT THE MAP COEFFICIENTS REMARK 3 AUTOMATICALLY GENERATED BY THE DEPOSITION PROCESS HAVE REMARK 3 UNFORTUNATELY RE-INSTATED THE ABOVE MENTIONED FILLED-IN REMARK 3 REFLECTIONS. THUS, THESE WILL PRODUCE MAPS WITH AN ELEMENT OF REMARK 3 MODEL BIAS I.E. THEY WILL TEND TO REPRODUCE THE MODEL. REMARK 4 REMARK 4 6Y93 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1292107096. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS 2.1.0 REMARK 200 DATA SCALING SOFTWARE : STARANISO V3.311 29-SEP-2019 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10830 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 72.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 38.1 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : 0.10800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 4.7 REMARK 200 DATA REDUNDANCY IN SHELL : 11.40 REMARK 200 R MERGE FOR SHELL (I) : 0.85100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 6S6H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL, PH 8.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 67.06950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.28350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 67.06950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.28350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 110 REMARK 465 THR A 111 REMARK 465 GLU A 112 REMARK 465 THR A 113 REMARK 465 ALA A 114 REMARK 465 SER A 115 REMARK 465 VAL A 116 REMARK 465 ALA A 117 REMARK 465 LEU A 118 REMARK 465 ILE A 119 REMARK 465 GLU A 120 REMARK 465 ASN A 121 REMARK 465 LEU A 122 REMARK 465 GLN A 123 REMARK 465 ARG A 124 REMARK 465 GLU A 125 REMARK 465 LYS A 231 REMARK 465 PRO A 232 REMARK 465 LYS A 233 REMARK 465 PRO A 234 REMARK 465 ARG A 235 REMARK 465 ARG A 236 REMARK 465 LYS A 237 REMARK 465 ALA A 238 REMARK 465 PHE A 239 REMARK 465 SER A 240 REMARK 465 ARG A 241 REMARK 465 ASP A 242 REMARK 465 LYS A 243 REMARK 465 LEU A 244 REMARK 465 ALA A 245 REMARK 465 ALA A 246 REMARK 465 ALA A 247 REMARK 465 LEU A 248 REMARK 465 GLU A 249 REMARK 465 HIS A 250 REMARK 465 HIS A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 465 HIS A 254 REMARK 465 HIS A 255 REMARK 465 MET B 110 REMARK 465 THR B 111 REMARK 465 GLU B 112 REMARK 465 GLN B 229 REMARK 465 ARG B 230 REMARK 465 LYS B 231 REMARK 465 PRO B 232 REMARK 465 LYS B 233 REMARK 465 PRO B 234 REMARK 465 ARG B 235 REMARK 465 ARG B 236 REMARK 465 LYS B 237 REMARK 465 ALA B 238 REMARK 465 PHE B 239 REMARK 465 SER B 240 REMARK 465 ARG B 241 REMARK 465 ASP B 242 REMARK 465 LYS B 243 REMARK 465 LEU B 244 REMARK 465 ALA B 245 REMARK 465 ALA B 246 REMARK 465 ALA B 247 REMARK 465 LEU B 248 REMARK 465 GLU B 249 REMARK 465 HIS B 250 REMARK 465 HIS B 251 REMARK 465 HIS B 252 REMARK 465 HIS B 253 REMARK 465 HIS B 254 REMARK 465 HIS B 255 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 153 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 181 CD CE NZ REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 LYS A 215 CG CD CE NZ REMARK 470 THR B 113 OG1 CG2 REMARK 470 LEU B 118 CG CD1 CD2 REMARK 470 GLU B 120 CG CD OE1 OE2 REMARK 470 ASN B 121 CG OD1 ND2 REMARK 470 ARG B 124 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 125 CG CD OE1 OE2 REMARK 470 ARG B 138 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 153 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 156 CG CD CE NZ REMARK 470 LYS B 215 CG CD CE NZ REMARK 470 LYS B 223 CG CD CE NZ REMARK 470 GLN B 227 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 156 -169.59 -124.25 REMARK 500 LYS B 156 -169.26 -122.80 REMARK 500 REMARK 500 REMARK: NULL DBREF 6Y93 A 111 242 UNP P37524 NOC_BACSU 111 242 DBREF 6Y93 B 111 242 UNP P37524 NOC_BACSU 111 242 DBREF 6Y93 C 1 22 PDB 6Y93 6Y93 1 22 DBREF 6Y93 D 1 22 PDB 6Y93 6Y93 1 22 SEQADV 6Y93 MET A 110 UNP P37524 INITIATING METHIONINE SEQADV 6Y93 LYS A 243 UNP P37524 EXPRESSION TAG SEQADV 6Y93 LEU A 244 UNP P37524 EXPRESSION TAG SEQADV 6Y93 ALA A 245 UNP P37524 EXPRESSION TAG SEQADV 6Y93 ALA A 246 UNP P37524 EXPRESSION TAG SEQADV 6Y93 ALA A 247 UNP P37524 EXPRESSION TAG SEQADV 6Y93 LEU A 248 UNP P37524 EXPRESSION TAG SEQADV 6Y93 GLU A 249 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS A 250 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS A 251 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS A 252 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS A 253 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS A 254 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS A 255 UNP P37524 EXPRESSION TAG SEQADV 6Y93 MET B 110 UNP P37524 INITIATING METHIONINE SEQADV 6Y93 LYS B 243 UNP P37524 EXPRESSION TAG SEQADV 6Y93 LEU B 244 UNP P37524 EXPRESSION TAG SEQADV 6Y93 ALA B 245 UNP P37524 EXPRESSION TAG SEQADV 6Y93 ALA B 246 UNP P37524 EXPRESSION TAG SEQADV 6Y93 ALA B 247 UNP P37524 EXPRESSION TAG SEQADV 6Y93 LEU B 248 UNP P37524 EXPRESSION TAG SEQADV 6Y93 GLU B 249 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS B 250 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS B 251 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS B 252 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS B 253 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS B 254 UNP P37524 EXPRESSION TAG SEQADV 6Y93 HIS B 255 UNP P37524 EXPRESSION TAG SEQRES 1 A 146 MET THR GLU THR ALA SER VAL ALA LEU ILE GLU ASN LEU SEQRES 2 A 146 GLN ARG GLU GLU LEU SER SER ILE GLU GLU ALA HIS ALA SEQRES 3 A 146 TYR ALA ARG LEU LEU GLU LEU HIS ASP LEU THR GLN GLU SEQRES 4 A 146 ALA LEU ALA GLN ARG LEU GLY LYS GLY GLN SER THR ILE SEQRES 5 A 146 ALA ASN LYS LEU ARG LEU LEU LYS LEU PRO GLN PRO VAL SEQRES 6 A 146 GLN GLU ALA ILE MET GLU LYS LYS ILE THR GLU ARG HIS SEQRES 7 A 146 ALA ARG ALA LEU ILE PRO LEU LYS GLN PRO GLU LEU GLN SEQRES 8 A 146 VAL THR LEU LEU THR GLU ILE ILE GLU LYS SER LEU ASN SEQRES 9 A 146 VAL LYS GLN THR GLU ASP ARG VAL VAL LYS MET LEU GLU SEQRES 10 A 146 GLN GLY GLN ARG LYS PRO LYS PRO ARG ARG LYS ALA PHE SEQRES 11 A 146 SER ARG ASP LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS SEQRES 12 A 146 HIS HIS HIS SEQRES 1 B 146 MET THR GLU THR ALA SER VAL ALA LEU ILE GLU ASN LEU SEQRES 2 B 146 GLN ARG GLU GLU LEU SER SER ILE GLU GLU ALA HIS ALA SEQRES 3 B 146 TYR ALA ARG LEU LEU GLU LEU HIS ASP LEU THR GLN GLU SEQRES 4 B 146 ALA LEU ALA GLN ARG LEU GLY LYS GLY GLN SER THR ILE SEQRES 5 B 146 ALA ASN LYS LEU ARG LEU LEU LYS LEU PRO GLN PRO VAL SEQRES 6 B 146 GLN GLU ALA ILE MET GLU LYS LYS ILE THR GLU ARG HIS SEQRES 7 B 146 ALA ARG ALA LEU ILE PRO LEU LYS GLN PRO GLU LEU GLN SEQRES 8 B 146 VAL THR LEU LEU THR GLU ILE ILE GLU LYS SER LEU ASN SEQRES 9 B 146 VAL LYS GLN THR GLU ASP ARG VAL VAL LYS MET LEU GLU SEQRES 10 B 146 GLN GLY GLN ARG LYS PRO LYS PRO ARG ARG LYS ALA PHE SEQRES 11 B 146 SER ARG ASP LYS LEU ALA ALA ALA LEU GLU HIS HIS HIS SEQRES 12 B 146 HIS HIS HIS SEQRES 1 C 22 DG DG DA DT DA DT DT DT DC DC DC DG DG SEQRES 2 C 22 DG DA DA DA DT DA DT DC DC SEQRES 1 D 22 DG DG DA DT DA DT DT DT DC DC DC DG DG SEQRES 2 D 22 DG DA DA DA DT DA DT DC DC HELIX 1 AA1 SER A 128 HIS A 143 1 16 HELIX 2 AA2 THR A 146 GLY A 155 1 10 HELIX 3 AA3 GLY A 157 ARG A 166 1 10 HELIX 4 AA4 LEU A 167 LEU A 170 5 4 HELIX 5 AA5 PRO A 171 GLU A 180 1 10 HELIX 6 AA6 THR A 184 ILE A 192 1 9 HELIX 7 AA7 GLN A 196 SER A 211 1 16 HELIX 8 AA8 ASN A 213 GLN A 229 1 17 HELIX 9 AA9 ALA B 114 GLU B 125 1 12 HELIX 10 AB1 SER B 128 HIS B 143 1 16 HELIX 11 AB2 THR B 146 GLY B 155 1 10 HELIX 12 AB3 GLY B 157 ARG B 166 1 10 HELIX 13 AB4 LEU B 167 LEU B 170 5 4 HELIX 14 AB5 PRO B 171 GLU B 180 1 10 HELIX 15 AB6 THR B 184 ILE B 192 1 9 HELIX 16 AB7 GLN B 196 SER B 211 1 16 HELIX 17 AB8 ASN B 213 GLY B 228 1 16 CRYST1 134.139 60.567 81.053 90.00 116.88 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007455 0.000000 0.003779 0.00000 SCALE2 0.000000 0.016511 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013832 0.00000