HEADER TRANSFERASE 10-MAR-20 6Y9R TITLE CRYSTAL STRUCTURE OF GSK-3B IN COMPLEX WITH THE 1H-INDAZOLE-3- TITLE 2 CARBOXAMIDE INHIBITOR 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHASE KINASE-3 BETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN; COMPND 5 SYNONYM: GSK-3 BETA,SERINE/THREONINE-PROTEIN KINASE GSK3B; COMPND 6 EC: 2.7.11.26,2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSK3B; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS GLYCOGEN SYNTHASE KINASE-3 BETA, INDAZOLE, INHIBITOR, KINASE, KEYWDS 2 TRANSFERASE, PROTEROS BIOSTRUCTURES GMBH EXPDTA X-RAY DIFFRACTION AUTHOR S.KRAPP,A.GRIESSNER,M.BLAESSE,R.BUONFIGLIO,R.OMBRATO REVDAT 2 08-JUL-20 6Y9R 1 REMARK REVDAT 1 20-MAY-20 6Y9R 0 JRNL AUTH R.BUONFIGLIO,F.PRATI,M.BISCHETTI,C.CAVARISCHIA,G.FURLOTTI, JRNL AUTH 2 R.OMBRATO JRNL TITL DISCOVERY OF NOVEL IMIDAZOPYRIDINE GSK-3 BETA INHIBITORS JRNL TITL 2 SUPPORTED BY COMPUTATIONAL APPROACHES. JRNL REF MOLECULES V. 25 2020 JRNL REFN ESSN 1420-3049 JRNL PMID 32380735 JRNL DOI 10.3390/MOLECULES25092163 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 26594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1671 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1819 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE SET COUNT : 133 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2808 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.80000 REMARK 3 B22 (A**2) : -1.45000 REMARK 3 B33 (A**2) : 5.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.184 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.162 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.154 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.974 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2948 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2796 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4031 ; 1.368 ; 1.994 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6422 ; 2.525 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 363 ; 5.035 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;32.632 ;23.175 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 464 ;12.905 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;17.839 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 453 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3332 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 678 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): -2.1540 -21.0190 -4.9980 REMARK 3 T TENSOR REMARK 3 T11: 0.2446 T22: 0.1003 REMARK 3 T33: 0.2373 T12: 0.0866 REMARK 3 T13: -0.0254 T23: -0.0261 REMARK 3 L TENSOR REMARK 3 L11: 4.0083 L22: 2.1726 REMARK 3 L33: 5.4181 L12: -0.7040 REMARK 3 L13: -1.7634 L23: 0.7548 REMARK 3 S TENSOR REMARK 3 S11: 0.1586 S12: 0.4259 S13: -0.1911 REMARK 3 S21: -0.1471 S22: -0.1739 S23: -0.1187 REMARK 3 S31: -0.0390 S32: 0.1908 S33: 0.0152 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 400 REMARK 3 ORIGIN FOR THE GROUP (A): -18.5800 -11.6520 15.6360 REMARK 3 T TENSOR REMARK 3 T11: 0.1855 T22: 0.0320 REMARK 3 T33: 0.0561 T12: -0.0132 REMARK 3 T13: -0.0116 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 3.6163 L22: 2.5659 REMARK 3 L33: 2.2047 L12: 0.5683 REMARK 3 L13: 0.2499 L23: 0.2681 REMARK 3 S TENSOR REMARK 3 S11: -0.0098 S12: -0.3096 S13: -0.1708 REMARK 3 S21: 0.1546 S22: -0.0270 S23: 0.1351 REMARK 3 S31: -0.0316 S32: -0.1050 S33: 0.0368 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 6Y9R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1292107204. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999999701977 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28265 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 66.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 66.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 48.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18 % PEG8000 0.13 M NACL 0.10 M REMARK 280 TRIS_ACETAT_7.5 5 MM TCEP, VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.73700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.73700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.29050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.14550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.29050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.14550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 51.73700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.29050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.14550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.73700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.29050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 54.14550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 36 CG CD CE NZ REMARK 480 LYS A 60 CE NZ REMARK 480 LYS A 74 NZ REMARK 480 LYS A 91 CD CE NZ REMARK 480 ARG A 92 CZ NH1 NH2 REMARK 480 LYS A 94 CD CE NZ REMARK 480 LYS A 103 CE NZ REMARK 480 LYS A 122 CE NZ REMARK 480 LYS A 123 CD CE NZ REMARK 480 ASP A 124 CG OD1 OD2 REMARK 480 LYS A 150 CE NZ REMARK 480 ARG A 278 CZ NH1 NH2 REMARK 480 LYS A 292 CE NZ REMARK 480 LYS A 297 CD CE NZ REMARK 480 LYS A 303 CE NZ REMARK 480 LYS A 349 NZ REMARK 480 ILE A 384 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 49 87.43 -66.73 REMARK 500 ASP A 181 40.49 -154.67 REMARK 500 ASP A 200 83.75 64.74 REMARK 500 CYS A 218 162.91 71.55 REMARK 500 CYS A 218 156.85 74.02 REMARK 500 THR A 289 25.49 -150.37 REMARK 500 GLU A 290 38.43 -89.18 REMARK 500 ASN A 370 71.46 -160.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 OH8 A 401 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OH8 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 DBREF 6Y9R A 35 384 UNP P49841 GSK3B_HUMAN 35 384 SEQRES 1 A 350 SER LYS VAL THR THR VAL VAL ALA THR PRO GLY GLN GLY SEQRES 2 A 350 PRO ASP ARG PRO GLN GLU VAL SER TYR THR ASP THR LYS SEQRES 3 A 350 VAL ILE GLY ASN GLY SER PHE GLY VAL VAL TYR GLN ALA SEQRES 4 A 350 LYS LEU CYS ASP SER GLY GLU LEU VAL ALA ILE LYS LYS SEQRES 5 A 350 VAL LEU GLN ASP LYS ARG PHE LYS ASN ARG GLU LEU GLN SEQRES 6 A 350 ILE MET ARG LYS LEU ASP HIS CYS ASN ILE VAL ARG LEU SEQRES 7 A 350 ARG TYR PHE PHE TYR SER SER GLY GLU LYS LYS ASP GLU SEQRES 8 A 350 VAL TYR LEU ASN LEU VAL LEU ASP TYR VAL PRO GLU THR SEQRES 9 A 350 VAL TYR ARG VAL ALA ARG HIS TYR SER ARG ALA LYS GLN SEQRES 10 A 350 THR LEU PRO VAL ILE TYR VAL LYS LEU TYR MET TYR GLN SEQRES 11 A 350 LEU PHE ARG SER LEU ALA TYR ILE HIS SER PHE GLY ILE SEQRES 12 A 350 CYS HIS ARG ASP ILE LYS PRO GLN ASN LEU LEU LEU ASP SEQRES 13 A 350 PRO ASP THR ALA VAL LEU LYS LEU CYS ASP PHE GLY SER SEQRES 14 A 350 ALA LYS GLN LEU VAL ARG GLY GLU PRO ASN VAL SER PTR SEQRES 15 A 350 ILE CYS SER ARG TYR TYR ARG ALA PRO GLU LEU ILE PHE SEQRES 16 A 350 GLY ALA THR ASP TYR THR SER SER ILE ASP VAL TRP SER SEQRES 17 A 350 ALA GLY CYS VAL LEU ALA GLU LEU LEU LEU GLY GLN PRO SEQRES 18 A 350 ILE PHE PRO GLY ASP SER GLY VAL ASP GLN LEU VAL GLU SEQRES 19 A 350 ILE ILE LYS VAL LEU GLY THR PRO THR ARG GLU GLN ILE SEQRES 20 A 350 ARG GLU MET ASN PRO ASN TYR THR GLU PHE LYS PHE PRO SEQRES 21 A 350 GLN ILE LYS ALA HIS PRO TRP THR LYS VAL PHE ARG PRO SEQRES 22 A 350 ARG THR PRO PRO GLU ALA ILE ALA LEU CYS SER ARG LEU SEQRES 23 A 350 LEU GLU TYR THR PRO THR ALA ARG LEU THR PRO LEU GLU SEQRES 24 A 350 ALA CYS ALA HIS SER PHE PHE ASP GLU LEU ARG ASP PRO SEQRES 25 A 350 ASN VAL LYS LEU PRO ASN GLY ARG ASP THR PRO ALA LEU SEQRES 26 A 350 PHE ASN PHE THR THR GLN GLU LEU SER SER ASN PRO PRO SEQRES 27 A 350 LEU ALA THR ILE LEU ILE PRO PRO HIS ALA ARG ILE MODRES 6Y9R PTR A 216 TYR MODIFIED RESIDUE HET PTR A 216 16 HET OH8 A 401 33 HET ACT A 402 4 HET GOL A 403 6 HET GOL A 404 6 HETNAM PTR O-PHOSPHOTYROSINE HETNAM OH8 ~{N}-[[1-(2-METHOXYETHYL)PIPERIDIN-4-YL]METHYL]-5-(5- HETNAM 2 OH8 PROPAN-2-YLOXYPYRIDIN-3-YL)-1~{H}-INDAZOLE-3- HETNAM 3 OH8 CARBOXAMIDE HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETSYN PTR PHOSPHONOTYROSINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 PTR C9 H12 N O6 P FORMUL 2 OH8 C25 H33 N5 O3 FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *133(H2 O) HELIX 1 AA1 ASN A 95 LEU A 104 1 10 HELIX 2 AA2 VAL A 139 ALA A 149 1 11 HELIX 3 AA3 PRO A 154 SER A 174 1 21 HELIX 4 AA4 LYS A 183 GLN A 185 5 3 HELIX 5 AA5 SER A 219 ARG A 223 5 5 HELIX 6 AA6 ALA A 224 PHE A 229 1 6 HELIX 7 AA7 SER A 236 GLY A 253 1 18 HELIX 8 AA8 SER A 261 GLY A 274 1 14 HELIX 9 AA9 THR A 277 MET A 284 1 8 HELIX 10 AB1 PRO A 300 PHE A 305 1 6 HELIX 11 AB2 PRO A 310 LEU A 321 1 12 HELIX 12 AB3 THR A 324 ARG A 328 5 5 HELIX 13 AB4 THR A 330 ALA A 336 1 7 HELIX 14 AB5 HIS A 337 ASP A 345 5 9 HELIX 15 AB6 ASN A 370 PRO A 372 5 3 HELIX 16 AB7 LEU A 373 ILE A 378 1 6 HELIX 17 AB8 PRO A 379 ARG A 383 5 5 SHEET 1 AA1 7 THR A 38 PRO A 44 0 SHEET 2 AA1 7 GLN A 52 GLY A 65 -1 O VAL A 54 N VAL A 40 SHEET 3 AA1 7 GLY A 68 LEU A 75 -1 O GLN A 72 N LYS A 60 SHEET 4 AA1 7 LEU A 81 LEU A 88 -1 O LYS A 86 N VAL A 69 SHEET 5 AA1 7 VAL A 126 ASP A 133 -1 O LEU A 128 N VAL A 87 SHEET 6 AA1 7 LEU A 112 SER A 119 -1 N SER A 118 O TYR A 127 SHEET 7 AA1 7 THR A 38 PRO A 44 -1 N THR A 43 O PHE A 115 SHEET 1 AA2 3 GLU A 137 THR A 138 0 SHEET 2 AA2 3 LEU A 187 ASP A 190 -1 O LEU A 189 N GLU A 137 SHEET 3 AA2 3 VAL A 195 LEU A 198 -1 O LYS A 197 N LEU A 188 SHEET 1 AA3 2 ILE A 177 CYS A 178 0 SHEET 2 AA3 2 LYS A 205 GLN A 206 -1 O LYS A 205 N CYS A 178 LINK C SER A 215 N PTR A 216 1555 1555 1.34 LINK C PTR A 216 N ILE A 217 1555 1555 1.32 SITE 1 AC1 10 ALA A 83 LYS A 85 ASP A 133 TYR A 134 SITE 2 AC1 10 VAL A 135 LEU A 188 ASP A 200 HOH A 508 SITE 3 AC1 10 HOH A 542 HOH A 633 SITE 1 AC2 4 ARG A 180 LYS A 205 ASN A 213 VAL A 214 SITE 1 AC3 5 THR A 326 ALA A 327 ARG A 328 THR A 330 SITE 2 AC3 5 GLU A 333 SITE 1 AC4 3 TYR A 56 LYS A 86 ASN A 129 CRYST1 84.581 108.291 103.474 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011823 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009234 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009664 0.00000