data_6YF2 # _entry.id 6YF2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YF2 pdb_00006yf2 10.2210/pdb6yf2/pdb WWPDB D_1292107546 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-03-10 2 'Structure model' 1 1 2021-05-05 3 'Structure model' 1 2 2021-09-29 4 'Structure model' 1 3 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' database_2 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_database_2.pdbx_DOI' 7 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YF2 _pdbx_database_status.recvd_initial_deposition_date 2020-03-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 6YF0 unspecified PDB . 6YF1 unspecified # _audit_author.name 'Kallen, J.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-9389-9056 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Chem Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2451-9456 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 28 _citation.language ? _citation.page_first 1271 _citation.page_last ? _citation.title 'Phenotypic screen identifies calcineurin-sparing FK506 analogs as BMP potentiators for treatment of acute kidney injury.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2021.04.001 _citation.pdbx_database_id_PubMed 33894161 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Larraufie, M.H.' 1 ? primary 'Gao, X.' 2 ? primary 'Xia, X.' 3 ? primary 'Devine, P.J.' 4 ? primary 'Kallen, J.' 5 ? primary 'Liu, D.' 6 ? primary 'Michaud, G.' 7 ? primary 'Harsch, A.' 8 ? primary 'Savage, N.' 9 ? primary 'Ding, J.' 10 ? primary 'Tan, K.' 11 ? primary 'Mihalic, M.' 12 ? primary 'Roggo, S.' 13 ? primary 'Canham, S.M.' 14 ? primary 'Bushell, S.M.' 15 ? primary 'Krastel, P.' 16 ? primary 'Gao, J.' 17 ? primary 'Izaac, A.' 18 ? primary 'Altinoglu, E.' 19 ? primary 'Lustenberger, P.' 20 ? primary 'Salcius, M.' 21 ? primary 'Harbinski, F.' 22 ? primary 'Williams, E.T.' 23 ? primary 'Zeng, L.' 24 ? primary 'Loureiro, J.' 25 ? primary 'Cong, F.' 26 ? primary 'Fryer, C.J.' 27 ? primary 'Klickstein, L.' 28 ? primary 'Tallarico, J.A.' 29 ? primary 'Jain, R.K.' 30 ? primary 'Rothman, D.M.' 31 ? primary 'Wang, S.' 32 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptidyl-prolyl cis-trans isomerase FKBP1A' 11990.676 1 5.2.1.8 ? ? ? 2 non-polymer syn ;(1~{R},9~{S},12~{S},13~{R},14~{S},17~{R},18~{E},21~{S},23~{S},24~{R},25~{S},27~{R})-23,25-dimethoxy-12-[(~{E})-1-[(1~{R},3~{R},4~{R})-3-methoxy-4-oxidanyl-cyclohexyl]prop-1-en-2-yl]-13,19,21,27-tetramethyl-1,14-bis(oxidanyl)-17-(2-oxidanylidenepropyl)-11,28-dioxa-4-azatricyclo[22.3.1.0^{4,9}]octacos-18-ene-2,3,10,16-tetrone ; 820.018 1 ? ? ? ? 3 non-polymer syn 'CADMIUM ION' 112.411 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 water nat water 18.015 144 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PPIase FKBP1A,12 kDa FK506-binding protein,FKBP-12,Calstabin-1,FK506-binding protein 1A,FKBP-1A,Immunophilin FKBP12,Rotamase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISP DYAYGATGHPGIIPPHATLVFDVELLKLE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISP DYAYGATGHPGIIPPHATLVFDVELLKLE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(1~{R},9~{S},12~{S},13~{R},14~{S},17~{R},18~{E},21~{S},23~{S},24~{R},25~{S},27~{R})-23,25-dimethoxy-12-[(~{E})-1-[(1~{R},3~{R},4~{R})-3-methoxy-4-oxidanyl-cyclohexyl]prop-1-en-2-yl]-13,19,21,27-tetramethyl-1,14-bis(oxidanyl)-17-(2-oxidanylidenepropyl)-11,28-dioxa-4-azatricyclo[22.3.1.0^{4,9}]octacos-18-ene-2,3,10,16-tetrone ; OP5 3 'CADMIUM ION' CD 4 'CHLORIDE ION' CL 5 'SODIUM ION' NA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 VAL n 1 5 GLN n 1 6 VAL n 1 7 GLU n 1 8 THR n 1 9 ILE n 1 10 SER n 1 11 PRO n 1 12 GLY n 1 13 ASP n 1 14 GLY n 1 15 ARG n 1 16 THR n 1 17 PHE n 1 18 PRO n 1 19 LYS n 1 20 ARG n 1 21 GLY n 1 22 GLN n 1 23 THR n 1 24 CYS n 1 25 VAL n 1 26 VAL n 1 27 HIS n 1 28 TYR n 1 29 THR n 1 30 GLY n 1 31 MET n 1 32 LEU n 1 33 GLU n 1 34 ASP n 1 35 GLY n 1 36 LYS n 1 37 LYS n 1 38 PHE n 1 39 ASP n 1 40 SER n 1 41 SER n 1 42 ARG n 1 43 ASP n 1 44 ARG n 1 45 ASN n 1 46 LYS n 1 47 PRO n 1 48 PHE n 1 49 LYS n 1 50 PHE n 1 51 MET n 1 52 LEU n 1 53 GLY n 1 54 LYS n 1 55 GLN n 1 56 GLU n 1 57 VAL n 1 58 ILE n 1 59 ARG n 1 60 GLY n 1 61 TRP n 1 62 GLU n 1 63 GLU n 1 64 GLY n 1 65 VAL n 1 66 ALA n 1 67 GLN n 1 68 MET n 1 69 SER n 1 70 VAL n 1 71 GLY n 1 72 GLN n 1 73 ARG n 1 74 ALA n 1 75 LYS n 1 76 LEU n 1 77 THR n 1 78 ILE n 1 79 SER n 1 80 PRO n 1 81 ASP n 1 82 TYR n 1 83 ALA n 1 84 TYR n 1 85 GLY n 1 86 ALA n 1 87 THR n 1 88 GLY n 1 89 HIS n 1 90 PRO n 1 91 GLY n 1 92 ILE n 1 93 ILE n 1 94 PRO n 1 95 PRO n 1 96 HIS n 1 97 ALA n 1 98 THR n 1 99 LEU n 1 100 VAL n 1 101 PHE n 1 102 ASP n 1 103 VAL n 1 104 GLU n 1 105 LEU n 1 106 LEU n 1 107 LYS n 1 108 LEU n 1 109 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 109 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'FKBP1A, FKBP1, FKBP12' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 OP5 non-polymer . ;(1~{R},9~{S},12~{S},13~{R},14~{S},17~{R},18~{E},21~{S},23~{S},24~{R},25~{S},27~{R})-23,25-dimethoxy-12-[(~{E})-1-[(1~{R},3~{R},4~{R})-3-methoxy-4-oxidanyl-cyclohexyl]prop-1-en-2-yl]-13,19,21,27-tetramethyl-1,14-bis(oxidanyl)-17-(2-oxidanylidenepropyl)-11,28-dioxa-4-azatricyclo[22.3.1.0^{4,9}]octacos-18-ene-2,3,10,16-tetrone ; ? 'C44 H69 N O13' 820.018 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 PRO 2 0 0 PRO PRO A . n A 1 3 GLY 3 1 1 GLY GLY A . n A 1 4 VAL 4 2 2 VAL VAL A . n A 1 5 GLN 5 3 3 GLN GLN A . n A 1 6 VAL 6 4 4 VAL VAL A . n A 1 7 GLU 7 5 5 GLU GLU A . n A 1 8 THR 8 6 6 THR THR A . n A 1 9 ILE 9 7 7 ILE ILE A . n A 1 10 SER 10 8 8 SER SER A . n A 1 11 PRO 11 9 9 PRO PRO A . n A 1 12 GLY 12 10 10 GLY GLY A . n A 1 13 ASP 13 11 11 ASP ASP A . n A 1 14 GLY 14 12 12 GLY GLY A . n A 1 15 ARG 15 13 13 ARG ARG A . n A 1 16 THR 16 14 14 THR THR A . n A 1 17 PHE 17 15 15 PHE PHE A . n A 1 18 PRO 18 16 16 PRO PRO A . n A 1 19 LYS 19 17 17 LYS LYS A . n A 1 20 ARG 20 18 18 ARG ARG A . n A 1 21 GLY 21 19 19 GLY GLY A . n A 1 22 GLN 22 20 20 GLN GLN A . n A 1 23 THR 23 21 21 THR THR A . n A 1 24 CYS 24 22 22 CYS CYS A . n A 1 25 VAL 25 23 23 VAL VAL A . n A 1 26 VAL 26 24 24 VAL VAL A . n A 1 27 HIS 27 25 25 HIS HIS A . n A 1 28 TYR 28 26 26 TYR TYR A . n A 1 29 THR 29 27 27 THR THR A . n A 1 30 GLY 30 28 28 GLY GLY A . n A 1 31 MET 31 29 29 MET MET A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 GLU 33 31 31 GLU GLU A . n A 1 34 ASP 34 32 32 ASP ASP A . n A 1 35 GLY 35 33 33 GLY GLY A . n A 1 36 LYS 36 34 34 LYS LYS A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 PHE 38 36 36 PHE PHE A . n A 1 39 ASP 39 37 37 ASP ASP A . n A 1 40 SER 40 38 38 SER SER A . n A 1 41 SER 41 39 39 SER SER A . n A 1 42 ARG 42 40 40 ARG ARG A . n A 1 43 ASP 43 41 41 ASP ASP A . n A 1 44 ARG 44 42 42 ARG ARG A . n A 1 45 ASN 45 43 43 ASN ASN A . n A 1 46 LYS 46 44 44 LYS LYS A . n A 1 47 PRO 47 45 45 PRO PRO A . n A 1 48 PHE 48 46 46 PHE PHE A . n A 1 49 LYS 49 47 47 LYS LYS A . n A 1 50 PHE 50 48 48 PHE PHE A . n A 1 51 MET 51 49 49 MET MET A . n A 1 52 LEU 52 50 50 LEU LEU A . n A 1 53 GLY 53 51 51 GLY GLY A . n A 1 54 LYS 54 52 52 LYS LYS A . n A 1 55 GLN 55 53 53 GLN GLN A . n A 1 56 GLU 56 54 54 GLU GLU A . n A 1 57 VAL 57 55 55 VAL VAL A . n A 1 58 ILE 58 56 56 ILE ILE A . n A 1 59 ARG 59 57 57 ARG ARG A . n A 1 60 GLY 60 58 58 GLY GLY A . n A 1 61 TRP 61 59 59 TRP TRP A . n A 1 62 GLU 62 60 60 GLU GLU A . n A 1 63 GLU 63 61 61 GLU GLU A . n A 1 64 GLY 64 62 62 GLY GLY A . n A 1 65 VAL 65 63 63 VAL VAL A . n A 1 66 ALA 66 64 64 ALA ALA A . n A 1 67 GLN 67 65 65 GLN GLN A . n A 1 68 MET 68 66 66 MET MET A . n A 1 69 SER 69 67 67 SER SER A . n A 1 70 VAL 70 68 68 VAL VAL A . n A 1 71 GLY 71 69 69 GLY GLY A . n A 1 72 GLN 72 70 70 GLN GLN A . n A 1 73 ARG 73 71 71 ARG ARG A . n A 1 74 ALA 74 72 72 ALA ALA A . n A 1 75 LYS 75 73 73 LYS LYS A . n A 1 76 LEU 76 74 74 LEU LEU A . n A 1 77 THR 77 75 75 THR THR A . n A 1 78 ILE 78 76 76 ILE ILE A . n A 1 79 SER 79 77 77 SER SER A . n A 1 80 PRO 80 78 78 PRO PRO A . n A 1 81 ASP 81 79 79 ASP ASP A . n A 1 82 TYR 82 80 80 TYR TYR A . n A 1 83 ALA 83 81 81 ALA ALA A . n A 1 84 TYR 84 82 82 TYR TYR A . n A 1 85 GLY 85 83 83 GLY GLY A . n A 1 86 ALA 86 84 84 ALA ALA A . n A 1 87 THR 87 85 85 THR THR A . n A 1 88 GLY 88 86 86 GLY GLY A . n A 1 89 HIS 89 87 87 HIS HIS A . n A 1 90 PRO 90 88 88 PRO PRO A . n A 1 91 GLY 91 89 89 GLY GLY A . n A 1 92 ILE 92 90 90 ILE ILE A . n A 1 93 ILE 93 91 91 ILE ILE A . n A 1 94 PRO 94 92 92 PRO PRO A . n A 1 95 PRO 95 93 93 PRO PRO A . n A 1 96 HIS 96 94 94 HIS HIS A . n A 1 97 ALA 97 95 95 ALA ALA A . n A 1 98 THR 98 96 96 THR THR A . n A 1 99 LEU 99 97 97 LEU LEU A . n A 1 100 VAL 100 98 98 VAL VAL A . n A 1 101 PHE 101 99 99 PHE PHE A . n A 1 102 ASP 102 100 100 ASP ASP A . n A 1 103 VAL 103 101 101 VAL VAL A . n A 1 104 GLU 104 102 102 GLU GLU A . n A 1 105 LEU 105 103 103 LEU LEU A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 LYS 107 105 105 LYS LYS A . n A 1 108 LEU 108 106 106 LEU LEU A . n A 1 109 GLU 109 107 107 GLU GLU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OP5 1 201 1 OP5 LI1 A . C 3 CD 1 202 1 CD CD A . D 4 CL 1 203 1 CL CL A . E 4 CL 1 204 2 CL CL A . F 5 NA 1 205 1 NA NA A . G 6 HOH 1 301 52 HOH HOH A . G 6 HOH 2 302 46 HOH HOH A . G 6 HOH 3 303 23 HOH HOH A . G 6 HOH 4 304 29 HOH HOH A . G 6 HOH 5 305 89 HOH HOH A . G 6 HOH 6 306 94 HOH HOH A . G 6 HOH 7 307 48 HOH HOH A . G 6 HOH 8 308 93 HOH HOH A . G 6 HOH 9 309 34 HOH HOH A . G 6 HOH 10 310 110 HOH HOH A . G 6 HOH 11 311 102 HOH HOH A . G 6 HOH 12 312 119 HOH HOH A . G 6 HOH 13 313 18 HOH HOH A . G 6 HOH 14 314 15 HOH HOH A . G 6 HOH 15 315 21 HOH HOH A . G 6 HOH 16 316 49 HOH HOH A . G 6 HOH 17 317 118 HOH HOH A . G 6 HOH 18 318 83 HOH HOH A . G 6 HOH 19 319 9 HOH HOH A . G 6 HOH 20 320 22 HOH HOH A . G 6 HOH 21 321 4 HOH HOH A . G 6 HOH 22 322 131 HOH HOH A . G 6 HOH 23 323 30 HOH HOH A . G 6 HOH 24 324 137 HOH HOH A . G 6 HOH 25 325 54 HOH HOH A . G 6 HOH 26 326 117 HOH HOH A . G 6 HOH 27 327 17 HOH HOH A . G 6 HOH 28 328 32 HOH HOH A . G 6 HOH 29 329 64 HOH HOH A . G 6 HOH 30 330 74 HOH HOH A . G 6 HOH 31 331 135 HOH HOH A . G 6 HOH 32 332 6 HOH HOH A . G 6 HOH 33 333 96 HOH HOH A . G 6 HOH 34 334 109 HOH HOH A . G 6 HOH 35 335 76 HOH HOH A . G 6 HOH 36 336 40 HOH HOH A . G 6 HOH 37 337 138 HOH HOH A . G 6 HOH 38 338 98 HOH HOH A . G 6 HOH 39 339 130 HOH HOH A . G 6 HOH 40 340 5 HOH HOH A . G 6 HOH 41 341 13 HOH HOH A . G 6 HOH 42 342 85 HOH HOH A . G 6 HOH 43 343 120 HOH HOH A . G 6 HOH 44 344 128 HOH HOH A . G 6 HOH 45 345 112 HOH HOH A . G 6 HOH 46 346 123 HOH HOH A . G 6 HOH 47 347 69 HOH HOH A . G 6 HOH 48 348 19 HOH HOH A . G 6 HOH 49 349 65 HOH HOH A . G 6 HOH 50 350 7 HOH HOH A . G 6 HOH 51 351 60 HOH HOH A . G 6 HOH 52 352 1 HOH HOH A . G 6 HOH 53 353 31 HOH HOH A . G 6 HOH 54 354 24 HOH HOH A . G 6 HOH 55 355 10 HOH HOH A . G 6 HOH 56 356 47 HOH HOH A . G 6 HOH 57 357 38 HOH HOH A . G 6 HOH 58 358 45 HOH HOH A . G 6 HOH 59 359 78 HOH HOH A . G 6 HOH 60 360 87 HOH HOH A . G 6 HOH 61 361 26 HOH HOH A . G 6 HOH 62 362 82 HOH HOH A . G 6 HOH 63 363 68 HOH HOH A . G 6 HOH 64 364 105 HOH HOH A . G 6 HOH 65 365 61 HOH HOH A . G 6 HOH 66 366 104 HOH HOH A . G 6 HOH 67 367 14 HOH HOH A . G 6 HOH 68 368 62 HOH HOH A . G 6 HOH 69 369 99 HOH HOH A . G 6 HOH 70 370 11 HOH HOH A . G 6 HOH 71 371 37 HOH HOH A . G 6 HOH 72 372 90 HOH HOH A . G 6 HOH 73 373 43 HOH HOH A . G 6 HOH 74 374 91 HOH HOH A . G 6 HOH 75 375 3 HOH HOH A . G 6 HOH 76 376 88 HOH HOH A . G 6 HOH 77 377 106 HOH HOH A . G 6 HOH 78 378 70 HOH HOH A . G 6 HOH 79 379 59 HOH HOH A . G 6 HOH 80 380 25 HOH HOH A . G 6 HOH 81 381 44 HOH HOH A . G 6 HOH 82 382 66 HOH HOH A . G 6 HOH 83 383 67 HOH HOH A . G 6 HOH 84 384 12 HOH HOH A . G 6 HOH 85 385 20 HOH HOH A . G 6 HOH 86 386 134 HOH HOH A . G 6 HOH 87 387 55 HOH HOH A . G 6 HOH 88 388 95 HOH HOH A . G 6 HOH 89 389 111 HOH HOH A . G 6 HOH 90 390 108 HOH HOH A . G 6 HOH 91 391 53 HOH HOH A . G 6 HOH 92 392 92 HOH HOH A . G 6 HOH 93 393 129 HOH HOH A . G 6 HOH 94 394 39 HOH HOH A . G 6 HOH 95 395 16 HOH HOH A . G 6 HOH 96 396 127 HOH HOH A . G 6 HOH 97 397 35 HOH HOH A . G 6 HOH 98 398 75 HOH HOH A . G 6 HOH 99 399 73 HOH HOH A . G 6 HOH 100 400 36 HOH HOH A . G 6 HOH 101 401 71 HOH HOH A . G 6 HOH 102 402 136 HOH HOH A . G 6 HOH 103 403 58 HOH HOH A . G 6 HOH 104 404 101 HOH HOH A . G 6 HOH 105 405 77 HOH HOH A . G 6 HOH 106 406 51 HOH HOH A . G 6 HOH 107 407 80 HOH HOH A . G 6 HOH 108 408 57 HOH HOH A . G 6 HOH 109 409 81 HOH HOH A . G 6 HOH 110 410 140 HOH HOH A . G 6 HOH 111 411 8 HOH HOH A . G 6 HOH 112 412 141 HOH HOH A . G 6 HOH 113 413 139 HOH HOH A . G 6 HOH 114 414 79 HOH HOH A . G 6 HOH 115 415 115 HOH HOH A . G 6 HOH 116 416 124 HOH HOH A . G 6 HOH 117 417 113 HOH HOH A . G 6 HOH 118 418 33 HOH HOH A . G 6 HOH 119 419 144 HOH HOH A . G 6 HOH 120 420 41 HOH HOH A . G 6 HOH 121 421 72 HOH HOH A . G 6 HOH 122 422 114 HOH HOH A . G 6 HOH 123 423 142 HOH HOH A . G 6 HOH 124 424 122 HOH HOH A . G 6 HOH 125 425 63 HOH HOH A . G 6 HOH 126 426 84 HOH HOH A . G 6 HOH 127 427 107 HOH HOH A . G 6 HOH 128 428 132 HOH HOH A . G 6 HOH 129 429 27 HOH HOH A . G 6 HOH 130 430 103 HOH HOH A . G 6 HOH 131 431 2 HOH HOH A . G 6 HOH 132 432 42 HOH HOH A . G 6 HOH 133 433 126 HOH HOH A . G 6 HOH 134 434 50 HOH HOH A . G 6 HOH 135 435 133 HOH HOH A . G 6 HOH 136 436 116 HOH HOH A . G 6 HOH 137 437 28 HOH HOH A . G 6 HOH 138 438 100 HOH HOH A . G 6 HOH 139 439 125 HOH HOH A . G 6 HOH 140 440 97 HOH HOH A . G 6 HOH 141 441 56 HOH HOH A . G 6 HOH 142 442 86 HOH HOH A . G 6 HOH 143 443 143 HOH HOH A . G 6 HOH 144 444 121 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 1 ? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 2 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 3 ? refinement ? ? 'Garib N. Murshudov' garib@ysbl.york.ac.uk ? ? ? ? Fortran_77 http://www.ccp4.ac.uk/dist/html/refmac5.html ? REFMAC ? ? program 5.5.0063 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Apr. 1, 2019' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.25 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6YF2 _cell.details ? _cell.formula_units_Z ? _cell.length_a 57.482 _cell.length_a_esd ? _cell.length_b 57.482 _cell.length_b_esd ? _cell.length_c 54.469 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YF2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YF2 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.88 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 34.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.9 M AmSO4, 0.15 M CdCl2' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-02-19 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'SI 111 channel' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99996 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99996 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate 10.900 _reflns.entry_id 6YF2 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.030 _reflns.d_resolution_low 19.770 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 44575 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.600 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.700 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 32.800 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.046 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.030 _reflns_shell.d_res_low 1.060 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 6.300 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2585 _reflns_shell.percent_possible_all 78.400 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.140 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.100 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.166 _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.1900 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.1900 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.3700 _refine.B_iso_max 42.760 _refine.B_iso_mean 10.4700 _refine.B_iso_min 4.970 _refine.correlation_coeff_Fo_to_Fc 0.9710 _refine.correlation_coeff_Fo_to_Fc_free 0.9690 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YF2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.0300 _refine.ls_d_res_low 19.7700 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 42347 _refine.ls_number_reflns_R_free 2229 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.6000 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1413 _refine.ls_R_factor_R_free 0.1488 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1409 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4DH0 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0280 _refine.pdbx_overall_ESU_R_Free 0.0250 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.5120 _refine.overall_SU_ML 0.0130 _refine.overall_SU_R_Cruickshank_DPI 0.0276 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.0300 _refine_hist.d_res_low 19.7700 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 1045 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 108 _refine_hist.pdbx_B_iso_mean_ligand 8.43 _refine_hist.pdbx_B_iso_mean_solvent 20.49 _refine_hist.pdbx_number_atoms_protein 839 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 62 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 0.022 996 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.369 2.045 1366 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 7.077 5.000 130 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.920 23.810 42 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 10.387 15.000 175 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 9.280 15.000 7 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.084 0.200 151 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.021 754 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.864 3.000 996 ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? 3.510 3.000 148 ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? 3.178 3.000 961 ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.0300 _refine_ls_shell.d_res_low 1.0570 _refine_ls_shell.number_reflns_all 2585 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 129 _refine_ls_shell.number_reflns_R_work 2456 _refine_ls_shell.percent_reflns_obs 78.3600 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.1380 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.1180 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6YF2 _struct.title 'FKBP12 in complex with the BMP potentiator compound 6 at 1.03A resolution' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YF2 _struct_keywords.text 'IMMUNOSUPPRESSION, IMMUNOSUPPRESSANT, BMP ENHANCER PROGRAM, ISOMERASE' _struct_keywords.pdbx_keywords ISOMERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FKB1A_HUMAN _struct_ref.pdbx_db_accession P62942 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY AYGATGHPGIIPPHATLVFDVELLKLE ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YF2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 109 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P62942 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 108 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 107 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6YF2 GLY A 1 ? UNP P62942 ? ? 'expression tag' -1 1 1 6YF2 PRO A 2 ? UNP P62942 ? ? 'expression tag' 0 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 500 ? 1 MORE -37 ? 1 'SSA (A^2)' 6100 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 42 ? ASN A 45 ? ARG A 40 ASN A 43 5 ? 4 HELX_P HELX_P2 AA2 ILE A 58 ? VAL A 65 ? ILE A 56 VAL A 63 1 ? 8 HELX_P HELX_P3 AA3 ALA A 66 ? MET A 68 ? ALA A 64 MET A 66 5 ? 3 HELX_P HELX_P4 AA4 PRO A 80 ? ALA A 83 ? PRO A 78 ALA A 81 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 56 OE1 ? ? ? 1_555 C CD . CD ? ? A GLU 54 A CD 202 1_555 ? ? ? ? ? ? ? 2.400 ? ? metalc2 metalc ? ? A GLU 56 OE2 ? ? ? 1_555 C CD . CD ? ? A GLU 54 A CD 202 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc3 metalc ? ? A GLU 56 OE1 ? ? ? 1_555 F NA . NA ? ? A GLU 54 A NA 205 1_555 ? ? ? ? ? ? ? 3.066 ? ? metalc4 metalc ? ? A GLU 56 OE1 ? ? ? 1_555 F NA . NA ? ? A GLU 54 A NA 205 2_555 ? ? ? ? ? ? ? 3.068 ? ? metalc5 metalc ? ? C CD . CD ? ? ? 1_555 G HOH . O ? ? A CD 202 A HOH 350 1_555 ? ? ? ? ? ? ? 2.364 ? ? metalc6 metalc ? ? C CD . CD ? ? ? 1_555 G HOH . O ? ? A CD 202 A HOH 411 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc7 metalc ? ? F NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 205 A HOH 371 1_555 ? ? ? ? ? ? ? 3.107 ? ? metalc8 metalc ? ? F NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 205 A HOH 371 2_555 ? ? ? ? ? ? ? 3.107 ? ? metalc9 metalc ? ? F NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 205 A HOH 437 1_555 ? ? ? ? ? ? ? 3.039 ? ? metalc10 metalc ? ? F NA . NA ? ? ? 1_555 G HOH . O ? ? A NA 205 A HOH 437 2_555 ? ? ? ? ? ? ? 3.036 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 OE2 ? A GLU 56 ? A GLU 54 ? 1_555 54.9 ? 2 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 O ? G HOH . ? A HOH 350 ? 1_555 85.2 ? 3 OE2 ? A GLU 56 ? A GLU 54 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 O ? G HOH . ? A HOH 350 ? 1_555 83.6 ? 4 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 O ? G HOH . ? A HOH 411 ? 1_555 93.1 ? 5 OE2 ? A GLU 56 ? A GLU 54 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 O ? G HOH . ? A HOH 411 ? 1_555 146.0 ? 6 O ? G HOH . ? A HOH 350 ? 1_555 CD ? C CD . ? A CD 202 ? 1_555 O ? G HOH . ? A HOH 411 ? 1_555 82.7 ? 7 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 0.0 ? 8 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 371 ? 1_555 66.2 ? 9 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 371 ? 1_555 66.2 ? 10 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 371 ? 2_555 122.1 ? 11 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 371 ? 2_555 122.1 ? 12 O ? G HOH . ? A HOH 371 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 371 ? 2_555 170.1 ? 13 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 1_555 109.5 ? 14 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 1_555 109.5 ? 15 O ? G HOH . ? A HOH 371 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 1_555 53.8 ? 16 O ? G HOH . ? A HOH 371 ? 2_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 1_555 122.3 ? 17 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 2_555 97.9 ? 18 OE1 ? A GLU 56 ? A GLU 54 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 2_555 97.9 ? 19 O ? G HOH . ? A HOH 371 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 2_555 122.5 ? 20 O ? G HOH . ? A HOH 371 ? 2_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 2_555 53.8 ? 21 O ? G HOH . ? A HOH 437 ? 1_555 NA ? F NA . ? A NA 205 ? 1_555 O ? G HOH . ? A HOH 437 ? 2_555 143.0 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 4 ? SER A 10 ? VAL A 2 SER A 8 AA1 2 ARG A 73 ? ILE A 78 ? ARG A 71 ILE A 76 AA1 3 LEU A 99 ? GLU A 109 ? LEU A 97 GLU A 107 AA1 4 THR A 23 ? LEU A 32 ? THR A 21 LEU A 30 AA1 5 LYS A 37 ? SER A 40 ? LYS A 35 SER A 38 AA2 1 VAL A 4 ? SER A 10 ? VAL A 2 SER A 8 AA2 2 ARG A 73 ? ILE A 78 ? ARG A 71 ILE A 76 AA2 3 LEU A 99 ? GLU A 109 ? LEU A 97 GLU A 107 AA2 4 THR A 23 ? LEU A 32 ? THR A 21 LEU A 30 AA2 5 PHE A 48 ? PHE A 50 ? PHE A 46 PHE A 48 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 7 ? N GLU A 5 O LYS A 75 ? O LYS A 73 AA1 2 3 N ILE A 78 ? N ILE A 76 O LEU A 99 ? O LEU A 97 AA1 3 4 O VAL A 100 ? O VAL A 98 N MET A 31 ? N MET A 29 AA1 4 5 N GLY A 30 ? N GLY A 28 O ASP A 39 ? O ASP A 37 AA2 1 2 N GLU A 7 ? N GLU A 5 O LYS A 75 ? O LYS A 73 AA2 2 3 N ILE A 78 ? N ILE A 76 O LEU A 99 ? O LEU A 97 AA2 3 4 O VAL A 100 ? O VAL A 98 N MET A 31 ? N MET A 29 AA2 4 5 N CYS A 24 ? N CYS A 22 O PHE A 50 ? O PHE A 48 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A OP5 201 ? 29 'binding site for residue OP5 A 201' AC2 Software A CD 202 ? 6 'binding site for residue CD A 202' AC3 Software A CL 203 ? 6 'binding site for residue CL A 203' AC4 Software A CL 204 ? 3 'binding site for residue CL A 204' AC5 Software A NA 205 ? 4 'binding site for residue NA A 205' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 29 TYR A 28 ? TYR A 26 . ? 1_555 ? 2 AC1 29 PHE A 38 ? PHE A 36 . ? 1_555 ? 3 AC1 29 ASP A 39 ? ASP A 37 . ? 1_555 ? 4 AC1 29 ARG A 44 ? ARG A 42 . ? 1_555 ? 5 AC1 29 PHE A 48 ? PHE A 46 . ? 1_555 ? 6 AC1 29 GLU A 56 ? GLU A 54 . ? 1_555 ? 7 AC1 29 VAL A 57 ? VAL A 55 . ? 1_555 ? 8 AC1 29 ILE A 58 ? ILE A 56 . ? 1_555 ? 9 AC1 29 TRP A 61 ? TRP A 59 . ? 1_555 ? 10 AC1 29 ALA A 83 ? ALA A 81 . ? 1_555 ? 11 AC1 29 TYR A 84 ? TYR A 82 . ? 8_556 ? 12 AC1 29 TYR A 84 ? TYR A 82 . ? 1_555 ? 13 AC1 29 THR A 87 ? THR A 85 . ? 8_556 ? 14 AC1 29 GLY A 88 ? GLY A 86 . ? 8_556 ? 15 AC1 29 HIS A 89 ? HIS A 87 . ? 7_556 ? 16 AC1 29 HIS A 89 ? HIS A 87 . ? 8_556 ? 17 AC1 29 PRO A 90 ? PRO A 88 . ? 7_556 ? 18 AC1 29 PRO A 90 ? PRO A 88 . ? 8_556 ? 19 AC1 29 ILE A 92 ? ILE A 90 . ? 7_556 ? 20 AC1 29 ILE A 93 ? ILE A 91 . ? 1_555 ? 21 AC1 29 PHE A 101 ? PHE A 99 . ? 1_555 ? 22 AC1 29 HOH G . ? HOH A 333 . ? 1_555 ? 23 AC1 29 HOH G . ? HOH A 371 . ? 1_555 ? 24 AC1 29 HOH G . ? HOH A 378 . ? 7_556 ? 25 AC1 29 HOH G . ? HOH A 378 . ? 1_555 ? 26 AC1 29 HOH G . ? HOH A 381 . ? 1_555 ? 27 AC1 29 HOH G . ? HOH A 381 . ? 2_555 ? 28 AC1 29 HOH G . ? HOH A 391 . ? 1_555 ? 29 AC1 29 HOH G . ? HOH A 429 . ? 8_556 ? 30 AC2 6 GLU A 56 ? GLU A 54 . ? 1_555 ? 31 AC2 6 CL D . ? CL A 203 . ? 2_555 ? 32 AC2 6 CL D . ? CL A 203 . ? 1_555 ? 33 AC2 6 CL E . ? CL A 204 . ? 1_555 ? 34 AC2 6 HOH G . ? HOH A 350 . ? 1_555 ? 35 AC2 6 HOH G . ? HOH A 411 . ? 1_555 ? 36 AC3 6 LYS A 54 ? LYS A 52 . ? 1_555 ? 37 AC3 6 LYS A 54 ? LYS A 52 . ? 2_555 ? 38 AC3 6 GLU A 56 ? GLU A 54 . ? 2_555 ? 39 AC3 6 GLU A 56 ? GLU A 54 . ? 1_555 ? 40 AC3 6 CD C . ? CD A 202 . ? 1_555 ? 41 AC3 6 CD C . ? CD A 202 . ? 2_555 ? 42 AC4 3 PHE A 50 ? PHE A 48 . ? 1_555 ? 43 AC4 3 LYS A 54 ? LYS A 52 . ? 2_555 ? 44 AC4 3 CD C . ? CD A 202 . ? 1_555 ? 45 AC5 4 GLU A 56 ? GLU A 54 . ? 2_555 ? 46 AC5 4 GLU A 56 ? GLU A 54 . ? 1_555 ? 47 AC5 4 HOH G . ? HOH A 437 . ? 2_555 ? 48 AC5 4 HOH G . ? HOH A 437 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 383 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 431 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_454 _pdbx_validate_symm_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 13 ? ? -139.57 -40.30 2 1 ALA A 81 ? ? -137.37 -118.64 3 1 ILE A 90 ? ? -137.81 -46.47 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CL 203 ? D CL . 2 1 A NA 205 ? F NA . 3 1 A HOH 409 ? G HOH . 4 1 A HOH 436 ? G HOH . # _phasing.method MR # _pdbx_entry_details.entry_id 6YF2 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id -1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CD CD CD N N 74 CL CL CL N N 75 CYS N N N N 76 CYS CA C N R 77 CYS C C N N 78 CYS O O N N 79 CYS CB C N N 80 CYS SG S N N 81 CYS OXT O N N 82 CYS H H N N 83 CYS H2 H N N 84 CYS HA H N N 85 CYS HB2 H N N 86 CYS HB3 H N N 87 CYS HG H N N 88 CYS HXT H N N 89 GLN N N N N 90 GLN CA C N S 91 GLN C C N N 92 GLN O O N N 93 GLN CB C N N 94 GLN CG C N N 95 GLN CD C N N 96 GLN OE1 O N N 97 GLN NE2 N N N 98 GLN OXT O N N 99 GLN H H N N 100 GLN H2 H N N 101 GLN HA H N N 102 GLN HB2 H N N 103 GLN HB3 H N N 104 GLN HG2 H N N 105 GLN HG3 H N N 106 GLN HE21 H N N 107 GLN HE22 H N N 108 GLN HXT H N N 109 GLU N N N N 110 GLU CA C N S 111 GLU C C N N 112 GLU O O N N 113 GLU CB C N N 114 GLU CG C N N 115 GLU CD C N N 116 GLU OE1 O N N 117 GLU OE2 O N N 118 GLU OXT O N N 119 GLU H H N N 120 GLU H2 H N N 121 GLU HA H N N 122 GLU HB2 H N N 123 GLU HB3 H N N 124 GLU HG2 H N N 125 GLU HG3 H N N 126 GLU HE2 H N N 127 GLU HXT H N N 128 GLY N N N N 129 GLY CA C N N 130 GLY C C N N 131 GLY O O N N 132 GLY OXT O N N 133 GLY H H N N 134 GLY H2 H N N 135 GLY HA2 H N N 136 GLY HA3 H N N 137 GLY HXT H N N 138 HIS N N N N 139 HIS CA C N S 140 HIS C C N N 141 HIS O O N N 142 HIS CB C N N 143 HIS CG C Y N 144 HIS ND1 N Y N 145 HIS CD2 C Y N 146 HIS CE1 C Y N 147 HIS NE2 N Y N 148 HIS OXT O N N 149 HIS H H N N 150 HIS H2 H N N 151 HIS HA H N N 152 HIS HB2 H N N 153 HIS HB3 H N N 154 HIS HD1 H N N 155 HIS HD2 H N N 156 HIS HE1 H N N 157 HIS HE2 H N N 158 HIS HXT H N N 159 HOH O O N N 160 HOH H1 H N N 161 HOH H2 H N N 162 ILE N N N N 163 ILE CA C N S 164 ILE C C N N 165 ILE O O N N 166 ILE CB C N S 167 ILE CG1 C N N 168 ILE CG2 C N N 169 ILE CD1 C N N 170 ILE OXT O N N 171 ILE H H N N 172 ILE H2 H N N 173 ILE HA H N N 174 ILE HB H N N 175 ILE HG12 H N N 176 ILE HG13 H N N 177 ILE HG21 H N N 178 ILE HG22 H N N 179 ILE HG23 H N N 180 ILE HD11 H N N 181 ILE HD12 H N N 182 ILE HD13 H N N 183 ILE HXT H N N 184 LEU N N N N 185 LEU CA C N S 186 LEU C C N N 187 LEU O O N N 188 LEU CB C N N 189 LEU CG C N N 190 LEU CD1 C N N 191 LEU CD2 C N N 192 LEU OXT O N N 193 LEU H H N N 194 LEU H2 H N N 195 LEU HA H N N 196 LEU HB2 H N N 197 LEU HB3 H N N 198 LEU HG H N N 199 LEU HD11 H N N 200 LEU HD12 H N N 201 LEU HD13 H N N 202 LEU HD21 H N N 203 LEU HD22 H N N 204 LEU HD23 H N N 205 LEU HXT H N N 206 LYS N N N N 207 LYS CA C N S 208 LYS C C N N 209 LYS O O N N 210 LYS CB C N N 211 LYS CG C N N 212 LYS CD C N N 213 LYS CE C N N 214 LYS NZ N N N 215 LYS OXT O N N 216 LYS H H N N 217 LYS H2 H N N 218 LYS HA H N N 219 LYS HB2 H N N 220 LYS HB3 H N N 221 LYS HG2 H N N 222 LYS HG3 H N N 223 LYS HD2 H N N 224 LYS HD3 H N N 225 LYS HE2 H N N 226 LYS HE3 H N N 227 LYS HZ1 H N N 228 LYS HZ2 H N N 229 LYS HZ3 H N N 230 LYS HXT H N N 231 MET N N N N 232 MET CA C N S 233 MET C C N N 234 MET O O N N 235 MET CB C N N 236 MET CG C N N 237 MET SD S N N 238 MET CE C N N 239 MET OXT O N N 240 MET H H N N 241 MET H2 H N N 242 MET HA H N N 243 MET HB2 H N N 244 MET HB3 H N N 245 MET HG2 H N N 246 MET HG3 H N N 247 MET HE1 H N N 248 MET HE2 H N N 249 MET HE3 H N N 250 MET HXT H N N 251 NA NA NA N N 252 OP5 C1 C N R 253 OP5 C2 C N S 254 OP5 O3 O N N 255 OP5 C41 C N N 256 OP5 C42 C N R 257 OP5 C43 C N S 258 OP5 C44 C N N 259 OP5 C46 C N N 260 OP5 C47 C N N 261 OP5 C48 C N N 262 OP5 C50 C N R 263 OP5 C51 C N N 264 OP5 C52 C N N 265 OP5 C53 C N R 266 OP5 C55 C N R 267 OP5 C58 C N N 268 OP5 C11 C N N 269 OP5 C12 C N N 270 OP5 C14 C N S 271 OP5 C15 C N N 272 OP5 C16 C N N 273 OP5 C17 C N N 274 OP5 C19 C N N 275 OP5 C20 C N N 276 OP5 C23 C N N 277 OP5 C24 C N S 278 OP5 C25 C N N 279 OP5 C26 C N N 280 OP5 C27 C N N 281 OP5 C28 C N N 282 OP5 C29 C N N 283 OP5 C30 C N N 284 OP5 C4 C N S 285 OP5 C5 C N N 286 OP5 O6 O N N 287 OP5 C7 C N R 288 OP5 C8 C N N 289 OP5 O9 O N N 290 OP5 C10 C N R 291 OP5 O13 O N N 292 OP5 O18 O N N 293 OP5 N21 N N N 294 OP5 O22 O N N 295 OP5 C31 C N R 296 OP5 O32 O N N 297 OP5 O33 O N N 298 OP5 C34 C N N 299 OP5 C35 C N N 300 OP5 C36 C N N 301 OP5 C37 C N S 302 OP5 C38 C N N 303 OP5 O39 O N N 304 OP5 C40 C N N 305 OP5 O45 O N N 306 OP5 O49 O N N 307 OP5 C54 C N N 308 OP5 O56 O N N 309 OP5 O57 O N N 310 OP5 H1 H N N 311 OP5 H2 H N N 312 OP5 H3 H N N 313 OP5 H4 H N N 314 OP5 H5 H N N 315 OP5 H6 H N N 316 OP5 H7 H N N 317 OP5 H8 H N N 318 OP5 H9 H N N 319 OP5 H10 H N N 320 OP5 H11 H N N 321 OP5 H12 H N N 322 OP5 H13 H N N 323 OP5 H14 H N N 324 OP5 H15 H N N 325 OP5 H16 H N N 326 OP5 H17 H N N 327 OP5 H18 H N N 328 OP5 H19 H N N 329 OP5 H20 H N N 330 OP5 H21 H N N 331 OP5 H22 H N N 332 OP5 H23 H N N 333 OP5 H24 H N N 334 OP5 H25 H N N 335 OP5 H26 H N N 336 OP5 H27 H N N 337 OP5 H28 H N N 338 OP5 H29 H N N 339 OP5 H30 H N N 340 OP5 H31 H N N 341 OP5 H32 H N N 342 OP5 H33 H N N 343 OP5 H34 H N N 344 OP5 H35 H N N 345 OP5 H36 H N N 346 OP5 H37 H N N 347 OP5 H38 H N N 348 OP5 H39 H N N 349 OP5 H40 H N N 350 OP5 H41 H N N 351 OP5 H42 H N N 352 OP5 H43 H N N 353 OP5 H44 H N N 354 OP5 H45 H N N 355 OP5 H46 H N N 356 OP5 H47 H N N 357 OP5 H48 H N N 358 OP5 H49 H N N 359 OP5 H50 H N N 360 OP5 H51 H N N 361 OP5 H52 H N N 362 OP5 H53 H N N 363 OP5 H54 H N N 364 OP5 H55 H N N 365 OP5 H56 H N N 366 OP5 H57 H N N 367 OP5 H58 H N N 368 OP5 H59 H N N 369 OP5 H60 H N N 370 OP5 H61 H N N 371 OP5 H62 H N N 372 OP5 H63 H N N 373 OP5 H64 H N N 374 OP5 H65 H N N 375 OP5 H66 H N N 376 OP5 H67 H N N 377 OP5 H68 H N N 378 OP5 H69 H N N 379 PHE N N N N 380 PHE CA C N S 381 PHE C C N N 382 PHE O O N N 383 PHE CB C N N 384 PHE CG C Y N 385 PHE CD1 C Y N 386 PHE CD2 C Y N 387 PHE CE1 C Y N 388 PHE CE2 C Y N 389 PHE CZ C Y N 390 PHE OXT O N N 391 PHE H H N N 392 PHE H2 H N N 393 PHE HA H N N 394 PHE HB2 H N N 395 PHE HB3 H N N 396 PHE HD1 H N N 397 PHE HD2 H N N 398 PHE HE1 H N N 399 PHE HE2 H N N 400 PHE HZ H N N 401 PHE HXT H N N 402 PRO N N N N 403 PRO CA C N S 404 PRO C C N N 405 PRO O O N N 406 PRO CB C N N 407 PRO CG C N N 408 PRO CD C N N 409 PRO OXT O N N 410 PRO H H N N 411 PRO HA H N N 412 PRO HB2 H N N 413 PRO HB3 H N N 414 PRO HG2 H N N 415 PRO HG3 H N N 416 PRO HD2 H N N 417 PRO HD3 H N N 418 PRO HXT H N N 419 SER N N N N 420 SER CA C N S 421 SER C C N N 422 SER O O N N 423 SER CB C N N 424 SER OG O N N 425 SER OXT O N N 426 SER H H N N 427 SER H2 H N N 428 SER HA H N N 429 SER HB2 H N N 430 SER HB3 H N N 431 SER HG H N N 432 SER HXT H N N 433 THR N N N N 434 THR CA C N S 435 THR C C N N 436 THR O O N N 437 THR CB C N R 438 THR OG1 O N N 439 THR CG2 C N N 440 THR OXT O N N 441 THR H H N N 442 THR H2 H N N 443 THR HA H N N 444 THR HB H N N 445 THR HG1 H N N 446 THR HG21 H N N 447 THR HG22 H N N 448 THR HG23 H N N 449 THR HXT H N N 450 TRP N N N N 451 TRP CA C N S 452 TRP C C N N 453 TRP O O N N 454 TRP CB C N N 455 TRP CG C Y N 456 TRP CD1 C Y N 457 TRP CD2 C Y N 458 TRP NE1 N Y N 459 TRP CE2 C Y N 460 TRP CE3 C Y N 461 TRP CZ2 C Y N 462 TRP CZ3 C Y N 463 TRP CH2 C Y N 464 TRP OXT O N N 465 TRP H H N N 466 TRP H2 H N N 467 TRP HA H N N 468 TRP HB2 H N N 469 TRP HB3 H N N 470 TRP HD1 H N N 471 TRP HE1 H N N 472 TRP HE3 H N N 473 TRP HZ2 H N N 474 TRP HZ3 H N N 475 TRP HH2 H N N 476 TRP HXT H N N 477 TYR N N N N 478 TYR CA C N S 479 TYR C C N N 480 TYR O O N N 481 TYR CB C N N 482 TYR CG C Y N 483 TYR CD1 C Y N 484 TYR CD2 C Y N 485 TYR CE1 C Y N 486 TYR CE2 C Y N 487 TYR CZ C Y N 488 TYR OH O N N 489 TYR OXT O N N 490 TYR H H N N 491 TYR H2 H N N 492 TYR HA H N N 493 TYR HB2 H N N 494 TYR HB3 H N N 495 TYR HD1 H N N 496 TYR HD2 H N N 497 TYR HE1 H N N 498 TYR HE2 H N N 499 TYR HH H N N 500 TYR HXT H N N 501 VAL N N N N 502 VAL CA C N S 503 VAL C C N N 504 VAL O O N N 505 VAL CB C N N 506 VAL CG1 C N N 507 VAL CG2 C N N 508 VAL OXT O N N 509 VAL H H N N 510 VAL H2 H N N 511 VAL HA H N N 512 VAL HB H N N 513 VAL HG11 H N N 514 VAL HG12 H N N 515 VAL HG13 H N N 516 VAL HG21 H N N 517 VAL HG22 H N N 518 VAL HG23 H N N 519 VAL HXT H N N 520 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 OP5 C34 C30 sing N N 237 OP5 C34 C29 sing N N 238 OP5 O49 C43 sing N N 239 OP5 C30 C25 sing N N 240 OP5 C29 C24 sing N N 241 OP5 C48 C42 sing N N 242 OP5 C27 C23 sing N N 243 OP5 O33 C28 doub N N 244 OP5 C20 C14 sing N N 245 OP5 C43 C38 sing N N 246 OP5 C43 C42 sing N N 247 OP5 C38 C35 sing N N 248 OP5 C28 C24 sing N N 249 OP5 C28 O32 sing N N 250 OP5 C42 C37 sing N N 251 OP5 C25 N21 sing N N 252 OP5 C24 N21 sing N N 253 OP5 C37 O32 sing N N 254 OP5 C37 C41 sing N N 255 OP5 C14 C19 sing N N 256 OP5 C14 C8 sing N N 257 OP5 C23 C19 sing N N 258 OP5 C23 C26 doub N E 259 OP5 N21 C17 sing N N 260 OP5 C46 C41 doub N E 261 OP5 C46 C50 sing N N 262 OP5 O45 C40 doub N N 263 OP5 C35 C31 sing N N 264 OP5 C35 O39 doub N N 265 OP5 C41 C47 sing N N 266 OP5 C31 C26 sing N N 267 OP5 C31 C36 sing N N 268 OP5 C8 C4 sing N N 269 OP5 C52 C50 sing N N 270 OP5 C52 C54 sing N N 271 OP5 C17 O22 doub N N 272 OP5 C17 C12 sing N N 273 OP5 C51 C50 sing N N 274 OP5 C51 C53 sing N N 275 OP5 C4 O9 sing N N 276 OP5 C4 C1 sing N N 277 OP5 C40 C36 sing N N 278 OP5 C40 C44 sing N N 279 OP5 O18 C12 doub N N 280 OP5 C55 C54 sing N N 281 OP5 C55 C53 sing N N 282 OP5 C55 O57 sing N N 283 OP5 C12 C7 sing N N 284 OP5 O3 C1 sing N N 285 OP5 O3 C7 sing N N 286 OP5 O56 C53 sing N N 287 OP5 O56 C58 sing N N 288 OP5 O9 C15 sing N N 289 OP5 C1 C2 sing N N 290 OP5 C7 C10 sing N N 291 OP5 C7 O13 sing N N 292 OP5 C2 O6 sing N N 293 OP5 C2 C5 sing N N 294 OP5 C10 C5 sing N N 295 OP5 C10 C16 sing N N 296 OP5 O6 C11 sing N N 297 OP5 C1 H1 sing N N 298 OP5 C2 H2 sing N N 299 OP5 C42 H3 sing N N 300 OP5 C43 H4 sing N N 301 OP5 C44 H5 sing N N 302 OP5 C44 H6 sing N N 303 OP5 C44 H7 sing N N 304 OP5 C46 H8 sing N N 305 OP5 C47 H9 sing N N 306 OP5 C47 H10 sing N N 307 OP5 C47 H11 sing N N 308 OP5 C48 H12 sing N N 309 OP5 C48 H13 sing N N 310 OP5 C48 H14 sing N N 311 OP5 C50 H15 sing N N 312 OP5 C51 H16 sing N N 313 OP5 C51 H17 sing N N 314 OP5 C52 H18 sing N N 315 OP5 C52 H19 sing N N 316 OP5 C53 H20 sing N N 317 OP5 C55 H21 sing N N 318 OP5 C58 H22 sing N N 319 OP5 C58 H23 sing N N 320 OP5 C58 H24 sing N N 321 OP5 C11 H25 sing N N 322 OP5 C11 H26 sing N N 323 OP5 C11 H27 sing N N 324 OP5 C14 H28 sing N N 325 OP5 C15 H29 sing N N 326 OP5 C15 H30 sing N N 327 OP5 C15 H31 sing N N 328 OP5 C16 H32 sing N N 329 OP5 C16 H33 sing N N 330 OP5 C16 H34 sing N N 331 OP5 C19 H35 sing N N 332 OP5 C19 H36 sing N N 333 OP5 C20 H37 sing N N 334 OP5 C20 H38 sing N N 335 OP5 C20 H39 sing N N 336 OP5 C24 H40 sing N N 337 OP5 C25 H41 sing N N 338 OP5 C25 H42 sing N N 339 OP5 C26 H43 sing N N 340 OP5 C27 H44 sing N N 341 OP5 C27 H45 sing N N 342 OP5 C27 H46 sing N N 343 OP5 C29 H47 sing N N 344 OP5 C29 H48 sing N N 345 OP5 C30 H49 sing N N 346 OP5 C30 H50 sing N N 347 OP5 C4 H51 sing N N 348 OP5 C5 H52 sing N N 349 OP5 C5 H53 sing N N 350 OP5 C8 H54 sing N N 351 OP5 C8 H55 sing N N 352 OP5 C10 H56 sing N N 353 OP5 O13 H57 sing N N 354 OP5 C31 H58 sing N N 355 OP5 C34 H59 sing N N 356 OP5 C34 H60 sing N N 357 OP5 C36 H61 sing N N 358 OP5 C36 H62 sing N N 359 OP5 C37 H63 sing N N 360 OP5 C38 H64 sing N N 361 OP5 C38 H65 sing N N 362 OP5 O49 H66 sing N N 363 OP5 C54 H67 sing N N 364 OP5 C54 H68 sing N N 365 OP5 O57 H69 sing N N 366 PHE N CA sing N N 367 PHE N H sing N N 368 PHE N H2 sing N N 369 PHE CA C sing N N 370 PHE CA CB sing N N 371 PHE CA HA sing N N 372 PHE C O doub N N 373 PHE C OXT sing N N 374 PHE CB CG sing N N 375 PHE CB HB2 sing N N 376 PHE CB HB3 sing N N 377 PHE CG CD1 doub Y N 378 PHE CG CD2 sing Y N 379 PHE CD1 CE1 sing Y N 380 PHE CD1 HD1 sing N N 381 PHE CD2 CE2 doub Y N 382 PHE CD2 HD2 sing N N 383 PHE CE1 CZ doub Y N 384 PHE CE1 HE1 sing N N 385 PHE CE2 CZ sing Y N 386 PHE CE2 HE2 sing N N 387 PHE CZ HZ sing N N 388 PHE OXT HXT sing N N 389 PRO N CA sing N N 390 PRO N CD sing N N 391 PRO N H sing N N 392 PRO CA C sing N N 393 PRO CA CB sing N N 394 PRO CA HA sing N N 395 PRO C O doub N N 396 PRO C OXT sing N N 397 PRO CB CG sing N N 398 PRO CB HB2 sing N N 399 PRO CB HB3 sing N N 400 PRO CG CD sing N N 401 PRO CG HG2 sing N N 402 PRO CG HG3 sing N N 403 PRO CD HD2 sing N N 404 PRO CD HD3 sing N N 405 PRO OXT HXT sing N N 406 SER N CA sing N N 407 SER N H sing N N 408 SER N H2 sing N N 409 SER CA C sing N N 410 SER CA CB sing N N 411 SER CA HA sing N N 412 SER C O doub N N 413 SER C OXT sing N N 414 SER CB OG sing N N 415 SER CB HB2 sing N N 416 SER CB HB3 sing N N 417 SER OG HG sing N N 418 SER OXT HXT sing N N 419 THR N CA sing N N 420 THR N H sing N N 421 THR N H2 sing N N 422 THR CA C sing N N 423 THR CA CB sing N N 424 THR CA HA sing N N 425 THR C O doub N N 426 THR C OXT sing N N 427 THR CB OG1 sing N N 428 THR CB CG2 sing N N 429 THR CB HB sing N N 430 THR OG1 HG1 sing N N 431 THR CG2 HG21 sing N N 432 THR CG2 HG22 sing N N 433 THR CG2 HG23 sing N N 434 THR OXT HXT sing N N 435 TRP N CA sing N N 436 TRP N H sing N N 437 TRP N H2 sing N N 438 TRP CA C sing N N 439 TRP CA CB sing N N 440 TRP CA HA sing N N 441 TRP C O doub N N 442 TRP C OXT sing N N 443 TRP CB CG sing N N 444 TRP CB HB2 sing N N 445 TRP CB HB3 sing N N 446 TRP CG CD1 doub Y N 447 TRP CG CD2 sing Y N 448 TRP CD1 NE1 sing Y N 449 TRP CD1 HD1 sing N N 450 TRP CD2 CE2 doub Y N 451 TRP CD2 CE3 sing Y N 452 TRP NE1 CE2 sing Y N 453 TRP NE1 HE1 sing N N 454 TRP CE2 CZ2 sing Y N 455 TRP CE3 CZ3 doub Y N 456 TRP CE3 HE3 sing N N 457 TRP CZ2 CH2 doub Y N 458 TRP CZ2 HZ2 sing N N 459 TRP CZ3 CH2 sing Y N 460 TRP CZ3 HZ3 sing N N 461 TRP CH2 HH2 sing N N 462 TRP OXT HXT sing N N 463 TYR N CA sing N N 464 TYR N H sing N N 465 TYR N H2 sing N N 466 TYR CA C sing N N 467 TYR CA CB sing N N 468 TYR CA HA sing N N 469 TYR C O doub N N 470 TYR C OXT sing N N 471 TYR CB CG sing N N 472 TYR CB HB2 sing N N 473 TYR CB HB3 sing N N 474 TYR CG CD1 doub Y N 475 TYR CG CD2 sing Y N 476 TYR CD1 CE1 sing Y N 477 TYR CD1 HD1 sing N N 478 TYR CD2 CE2 doub Y N 479 TYR CD2 HD2 sing N N 480 TYR CE1 CZ doub Y N 481 TYR CE1 HE1 sing N N 482 TYR CE2 CZ sing Y N 483 TYR CE2 HE2 sing N N 484 TYR CZ OH sing N N 485 TYR OH HH sing N N 486 TYR OXT HXT sing N N 487 VAL N CA sing N N 488 VAL N H sing N N 489 VAL N H2 sing N N 490 VAL CA C sing N N 491 VAL CA CB sing N N 492 VAL CA HA sing N N 493 VAL C O doub N N 494 VAL C OXT sing N N 495 VAL CB CG1 sing N N 496 VAL CB CG2 sing N N 497 VAL CB HB sing N N 498 VAL CG1 HG11 sing N N 499 VAL CG1 HG12 sing N N 500 VAL CG1 HG13 sing N N 501 VAL CG2 HG21 sing N N 502 VAL CG2 HG22 sing N N 503 VAL CG2 HG23 sing N N 504 VAL OXT HXT sing N N 505 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id OP5 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id OP5 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4DH0 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6YF2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.017397 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017397 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018359 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CD CL N NA O S # loop_