HEADER ISOMERASE 25-MAR-20 6YF2 TITLE FKBP12 IN COMPLEX WITH THE BMP POTENTIATOR COMPOUND 6 AT 1.03A TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP1A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPIASE FKBP1A,12 KDA FK506-BINDING PROTEIN,FKBP-12, COMPND 5 CALSTABIN-1,FK506-BINDING PROTEIN 1A,FKBP-1A,IMMUNOPHILIN FKBP12, COMPND 6 ROTAMASE; COMPND 7 EC: 5.2.1.8; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FKBP1A, FKBP1, FKBP12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS IMMUNOSUPPRESSION, IMMUNOSUPPRESSANT, BMP ENHANCER PROGRAM, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KALLEN REVDAT 4 24-JAN-24 6YF2 1 REMARK REVDAT 3 29-SEP-21 6YF2 1 JRNL REVDAT 2 05-MAY-21 6YF2 1 JRNL REVDAT 1 10-MAR-21 6YF2 0 JRNL AUTH M.H.LARRAUFIE,X.GAO,X.XIA,P.J.DEVINE,J.KALLEN,D.LIU, JRNL AUTH 2 G.MICHAUD,A.HARSCH,N.SAVAGE,J.DING,K.TAN,M.MIHALIC,S.ROGGO, JRNL AUTH 3 S.M.CANHAM,S.M.BUSHELL,P.KRASTEL,J.GAO,A.IZAAC,E.ALTINOGLU, JRNL AUTH 4 P.LUSTENBERGER,M.SALCIUS,F.HARBINSKI,E.T.WILLIAMS,L.ZENG, JRNL AUTH 5 J.LOUREIRO,F.CONG,C.J.FRYER,L.KLICKSTEIN,J.A.TALLARICO, JRNL AUTH 6 R.K.JAIN,D.M.ROTHMAN,S.WANG JRNL TITL PHENOTYPIC SCREEN IDENTIFIES CALCINEURIN-SPARING FK506 JRNL TITL 2 ANALOGS AS BMP POTENTIATORS FOR TREATMENT OF ACUTE KIDNEY JRNL TITL 3 INJURY. JRNL REF CELL CHEM BIOL V. 28 1271 2021 JRNL REFN ESSN 2451-9456 JRNL PMID 33894161 JRNL DOI 10.1016/J.CHEMBIOL.2021.04.001 REMARK 2 REMARK 2 RESOLUTION. 1.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0063 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 42347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.149 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2229 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2456 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.1180 REMARK 3 BIN FREE R VALUE SET COUNT : 129 REMARK 3 BIN FREE R VALUE : 0.1380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 839 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 144 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.19000 REMARK 3 B22 (A**2) : -0.19000 REMARK 3 B33 (A**2) : 0.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.028 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.025 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.013 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.512 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 996 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1366 ; 1.369 ; 2.045 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 130 ; 7.077 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 42 ;32.920 ;23.810 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 175 ;10.387 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ; 9.280 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 151 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 754 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 996 ; 0.864 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 148 ; 3.510 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 961 ; 3.178 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6YF2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1292107546. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99996 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44575 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.030 REMARK 200 RESOLUTION RANGE LOW (A) : 19.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.14000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4DH0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9 M AMSO4, 0.15 M CDCL2, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.74100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.74100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.23450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.74100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.74100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 27.23450 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.74100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.74100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 27.23450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.74100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.74100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 27.23450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 203 LIES ON A SPECIAL POSITION. REMARK 375 NA NA A 205 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 409 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 436 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 383 O HOH A 431 4454 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 13 -40.30 -139.57 REMARK 500 ALA A 81 -118.64 -137.37 REMARK 500 ILE A 90 -46.47 -137.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CD A 202 CD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 54 OE1 REMARK 620 2 GLU A 54 OE2 54.9 REMARK 620 3 HOH A 350 O 85.2 83.6 REMARK 620 4 HOH A 411 O 93.1 146.0 82.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 205 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 54 OE1 REMARK 620 2 GLU A 54 OE1 0.0 REMARK 620 3 HOH A 371 O 66.2 66.2 REMARK 620 4 HOH A 371 O 122.1 122.1 170.1 REMARK 620 5 HOH A 437 O 109.5 109.5 53.8 122.3 REMARK 620 6 HOH A 437 O 97.9 97.9 122.5 53.8 143.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OP5 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CD A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 205 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6YF0 RELATED DB: PDB REMARK 900 RELATED ID: 6YF1 RELATED DB: PDB DBREF 6YF2 A 1 107 UNP P62942 FKB1A_HUMAN 2 108 SEQADV 6YF2 GLY A -1 UNP P62942 EXPRESSION TAG SEQADV 6YF2 PRO A 0 UNP P62942 EXPRESSION TAG SEQRES 1 A 109 GLY PRO GLY VAL GLN VAL GLU THR ILE SER PRO GLY ASP SEQRES 2 A 109 GLY ARG THR PHE PRO LYS ARG GLY GLN THR CYS VAL VAL SEQRES 3 A 109 HIS TYR THR GLY MET LEU GLU ASP GLY LYS LYS PHE ASP SEQRES 4 A 109 SER SER ARG ASP ARG ASN LYS PRO PHE LYS PHE MET LEU SEQRES 5 A 109 GLY LYS GLN GLU VAL ILE ARG GLY TRP GLU GLU GLY VAL SEQRES 6 A 109 ALA GLN MET SER VAL GLY GLN ARG ALA LYS LEU THR ILE SEQRES 7 A 109 SER PRO ASP TYR ALA TYR GLY ALA THR GLY HIS PRO GLY SEQRES 8 A 109 ILE ILE PRO PRO HIS ALA THR LEU VAL PHE ASP VAL GLU SEQRES 9 A 109 LEU LEU LYS LEU GLU HET OP5 A 201 58 HET CD A 202 1 HET CL A 203 1 HET CL A 204 1 HET NA A 205 1 HETNAM OP5 (1~{R},9~{S},12~{S},13~{R},14~{S},17~{R},18~{E},21~{S}, HETNAM 2 OP5 23~{S},24~{R},25~{S},27~{R})-23,25-DIMETHOXY-12- HETNAM 3 OP5 [(~{E})-1-[(1~{R},3~{R},4~{R})-3-METHOXY-4-OXIDANYL- HETNAM 4 OP5 CYCLOHEXYL]PROP-1-EN-2-YL]-13,19,21,27-TETRAMETHYL-1, HETNAM 5 OP5 14-BIS(OXIDANYL)-17-(2-OXIDANYLIDENEPROPYL)-11,28- HETNAM 6 OP5 DIOXA-4-AZATRICYCLO[22.3.1.0^{4,9}]OCTACOS-18-ENE-2,3, HETNAM 7 OP5 10,16-TETRONE HETNAM CD CADMIUM ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 2 OP5 C44 H69 N O13 FORMUL 3 CD CD 2+ FORMUL 4 CL 2(CL 1-) FORMUL 6 NA NA 1+ FORMUL 7 HOH *144(H2 O) HELIX 1 AA1 ARG A 40 ASN A 43 5 4 HELIX 2 AA2 ILE A 56 VAL A 63 1 8 HELIX 3 AA3 ALA A 64 MET A 66 5 3 HELIX 4 AA4 PRO A 78 ALA A 81 5 4 SHEET 1 AA1 5 VAL A 2 SER A 8 0 SHEET 2 AA1 5 ARG A 71 ILE A 76 -1 O LYS A 73 N GLU A 5 SHEET 3 AA1 5 LEU A 97 GLU A 107 -1 O LEU A 97 N ILE A 76 SHEET 4 AA1 5 THR A 21 LEU A 30 -1 N MET A 29 O VAL A 98 SHEET 5 AA1 5 LYS A 35 SER A 38 -1 O ASP A 37 N GLY A 28 SHEET 1 AA2 5 VAL A 2 SER A 8 0 SHEET 2 AA2 5 ARG A 71 ILE A 76 -1 O LYS A 73 N GLU A 5 SHEET 3 AA2 5 LEU A 97 GLU A 107 -1 O LEU A 97 N ILE A 76 SHEET 4 AA2 5 THR A 21 LEU A 30 -1 N MET A 29 O VAL A 98 SHEET 5 AA2 5 PHE A 46 PHE A 48 -1 O PHE A 48 N CYS A 22 LINK OE1 GLU A 54 CD CD A 202 1555 1555 2.40 LINK OE2 GLU A 54 CD CD A 202 1555 1555 2.35 LINK OE1 GLU A 54 NA NA A 205 1555 1555 3.07 LINK OE1 GLU A 54 NA NA A 205 1555 2555 3.07 LINK CD CD A 202 O HOH A 350 1555 1555 2.36 LINK CD CD A 202 O HOH A 411 1555 1555 2.22 LINK NA NA A 205 O HOH A 371 1555 1555 3.11 LINK NA NA A 205 O HOH A 371 1555 2555 3.11 LINK NA NA A 205 O HOH A 437 1555 1555 3.04 LINK NA NA A 205 O HOH A 437 1555 2555 3.04 SITE 1 AC1 24 TYR A 26 PHE A 36 ASP A 37 ARG A 42 SITE 2 AC1 24 PHE A 46 GLU A 54 VAL A 55 ILE A 56 SITE 3 AC1 24 TRP A 59 ALA A 81 TYR A 82 THR A 85 SITE 4 AC1 24 GLY A 86 HIS A 87 PRO A 88 ILE A 90 SITE 5 AC1 24 ILE A 91 PHE A 99 HOH A 333 HOH A 371 SITE 6 AC1 24 HOH A 378 HOH A 381 HOH A 391 HOH A 429 SITE 1 AC2 5 GLU A 54 CL A 203 CL A 204 HOH A 350 SITE 2 AC2 5 HOH A 411 SITE 1 AC3 3 LYS A 52 GLU A 54 CD A 202 SITE 1 AC4 3 PHE A 48 LYS A 52 CD A 202 SITE 1 AC5 2 GLU A 54 HOH A 437 CRYST1 57.482 57.482 54.469 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017397 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017397 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018359 0.00000