HEADER HYDROLASE 27-MAR-20 6YGE TITLE NADASE FROM ASPERGILLUS FUMIGATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AFNADASE; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS FUMIGATUS AF293; SOURCE 3 ORGANISM_TAXID: 330879; SOURCE 4 GENE: AFUA_6G14470; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS NAD+ GLYCOHYDROLASE, NAD, CA-BINDING, HOMODIMER, GLYCOPROTEIN, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR O.STROMLAND,M.ZIEGLER,J.P.KALLIO REVDAT 3 13-NOV-24 6YGE 1 REMARK REVDAT 2 07-JUL-21 6YGE 1 JRNL REVDAT 1 23-DEC-20 6YGE 0 JRNL AUTH O.STROMLAND,J.P.KALLIO,A.PSCHIBUL,R.H.SKOGE, JRNL AUTH 2 H.M.HARDARDOTTIR,L.J.SVERKELI,T.HEINEKAMP,O.KNIEMEYER, JRNL AUTH 3 M.MIGAUD,M.V.MAKAROV,T.I.GOSSMANN,A.A.BRAKHAGE,M.ZIEGLER JRNL TITL DISCOVERY OF FUNGAL SURFACE NADASES PREDOMINANTLY PRESENT IN JRNL TITL 2 PATHOGENIC SPECIES. JRNL REF NAT COMMUN V. 12 1631 2021 JRNL REFN ESSN 2041-1723 JRNL PMID 33712585 JRNL DOI 10.1038/S41467-021-21307-Z REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1-3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 86.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 75885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3780 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 86.0000 - 4.8000 1.00 3154 170 0.1705 0.1759 REMARK 3 2 4.8000 - 3.8100 1.00 3012 159 0.1323 0.1565 REMARK 3 3 3.8100 - 3.3300 0.88 2567 137 0.1559 0.1939 REMARK 3 4 3.3300 - 3.0200 1.00 2926 157 0.1726 0.1963 REMARK 3 5 3.0200 - 2.8100 1.00 2919 147 0.1799 0.2226 REMARK 3 6 2.8100 - 2.6400 0.87 2495 144 0.1796 0.2226 REMARK 3 7 2.6400 - 2.5100 1.00 2886 160 0.1844 0.2620 REMARK 3 8 2.5100 - 2.4000 1.00 2911 120 0.1876 0.2204 REMARK 3 9 2.4000 - 2.3100 1.00 2852 177 0.1826 0.2214 REMARK 3 10 2.3100 - 2.2300 0.76 2208 82 0.1808 0.2043 REMARK 3 11 2.2300 - 2.1600 1.00 2862 150 0.1850 0.2628 REMARK 3 12 2.1600 - 2.1000 1.00 2867 156 0.1821 0.2265 REMARK 3 13 2.1000 - 2.0400 0.67 1911 97 0.2011 0.2754 REMARK 3 14 2.0400 - 1.9900 1.00 2842 144 0.1941 0.2441 REMARK 3 15 1.9900 - 1.9500 0.99 2822 168 0.2010 0.2587 REMARK 3 16 1.9500 - 1.9000 0.57 1629 96 0.2153 0.2691 REMARK 3 17 1.9000 - 1.8700 0.98 2774 142 0.2246 0.2463 REMARK 3 18 1.8700 - 1.8300 0.97 2737 174 0.2421 0.2800 REMARK 3 19 1.8300 - 1.8000 0.96 2715 161 0.2429 0.3094 REMARK 3 20 1.8000 - 1.7700 0.95 2700 140 0.2335 0.2873 REMARK 3 21 1.7700 - 1.7400 0.95 2697 135 0.2466 0.2111 REMARK 3 22 1.7400 - 1.7100 0.93 2654 116 0.2622 0.2650 REMARK 3 23 1.7100 - 1.6900 0.93 2643 145 0.2777 0.3124 REMARK 3 24 1.6900 - 1.6600 0.92 2642 118 0.3008 0.3917 REMARK 3 25 1.6600 - 1.6400 0.92 2580 110 0.3180 0.3506 REMARK 3 26 1.6400 - 1.6200 0.91 2585 145 0.3298 0.3531 REMARK 3 27 1.6200 - 1.6000 0.90 2515 130 0.3521 0.3729 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.218 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.449 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.48 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3607 REMARK 3 ANGLE : 0.882 4949 REMARK 3 CHIRALITY : 0.056 551 REMARK 3 PLANARITY : 0.007 646 REMARK 3 DIHEDRAL : 9.604 568 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 27 THROUGH 234) REMARK 3 ORIGIN FOR THE GROUP (A): 21.1075 85.2767 287.4404 REMARK 3 T TENSOR REMARK 3 T11: 0.2616 T22: 0.2369 REMARK 3 T33: 0.2038 T12: -0.0467 REMARK 3 T13: -0.0204 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.5113 L22: 1.1980 REMARK 3 L33: 2.2215 L12: 0.1587 REMARK 3 L13: -0.6882 L23: -0.3193 REMARK 3 S TENSOR REMARK 3 S11: 0.0707 S12: -0.1314 S13: 0.1265 REMARK 3 S21: 0.1356 S22: 0.0361 S23: 0.0062 REMARK 3 S31: -0.2657 S32: 0.1449 S33: -0.1117 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 26 THROUGH 233) REMARK 3 ORIGIN FOR THE GROUP (A): 12.0113 73.8392 269.8436 REMARK 3 T TENSOR REMARK 3 T11: 0.2818 T22: 0.2020 REMARK 3 T33: 0.2375 T12: -0.0829 REMARK 3 T13: -0.0505 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.9050 L22: 1.3209 REMARK 3 L33: 2.0955 L12: 0.2370 REMARK 3 L13: -0.1329 L23: -0.4375 REMARK 3 S TENSOR REMARK 3 S11: -0.0282 S12: 0.1019 S13: -0.0623 REMARK 3 S21: -0.2545 S22: 0.1601 S23: 0.2451 REMARK 3 S31: 0.2128 S32: -0.2079 S33: -0.1246 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YGE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-20. REMARK 100 THE DEPOSITION ID IS D_1292105770. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75947 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 86.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : 0.05886 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.68800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL, PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 0.3 M CACL2 AND REMARK 280 20-25% (W/V) PEG 8000, PH 5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 171.99667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.99833 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 85.99833 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 171.99667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 ILE B 2 REMARK 465 PHE B 3 REMARK 465 THR B 4 REMARK 465 ASN B 5 REMARK 465 ALA B 6 REMARK 465 ILE B 7 REMARK 465 LEU B 8 REMARK 465 VAL B 9 REMARK 465 ILE B 10 REMARK 465 SER B 11 REMARK 465 ALA B 12 REMARK 465 LEU B 13 REMARK 465 LEU B 14 REMARK 465 PRO B 15 REMARK 465 ALA B 16 REMARK 465 THR B 17 REMARK 465 VAL B 18 REMARK 465 LEU B 19 REMARK 465 SER B 20 REMARK 465 LEU B 21 REMARK 465 GLN B 22 REMARK 465 HIS B 23 REMARK 465 THR B 24 REMARK 465 GLU B 25 REMARK 465 ASP B 26 REMARK 465 ASP B 235 REMARK 465 VAL B 236 REMARK 465 LEU B 237 REMARK 465 PHE B 238 REMARK 465 GLN B 239 REMARK 465 GLY B 240 REMARK 465 PRO B 241 REMARK 465 GLY B 242 REMARK 465 HIS B 243 REMARK 465 HIS B 244 REMARK 465 HIS B 245 REMARK 465 HIS B 246 REMARK 465 HIS B 247 REMARK 465 HIS B 248 REMARK 465 MET A 1 REMARK 465 ILE A 2 REMARK 465 PHE A 3 REMARK 465 THR A 4 REMARK 465 ASN A 5 REMARK 465 ALA A 6 REMARK 465 ILE A 7 REMARK 465 LEU A 8 REMARK 465 VAL A 9 REMARK 465 ILE A 10 REMARK 465 SER A 11 REMARK 465 ALA A 12 REMARK 465 LEU A 13 REMARK 465 LEU A 14 REMARK 465 PRO A 15 REMARK 465 ALA A 16 REMARK 465 THR A 17 REMARK 465 VAL A 18 REMARK 465 LEU A 19 REMARK 465 SER A 20 REMARK 465 LEU A 21 REMARK 465 GLN A 22 REMARK 465 HIS A 23 REMARK 465 THR A 24 REMARK 465 GLU A 25 REMARK 465 GLN A 234 REMARK 465 ASP A 235 REMARK 465 VAL A 236 REMARK 465 LEU A 237 REMARK 465 PHE A 238 REMARK 465 GLN A 239 REMARK 465 GLY A 240 REMARK 465 PRO A 241 REMARK 465 GLY A 242 REMARK 465 HIS A 243 REMARK 465 HIS A 244 REMARK 465 HIS A 245 REMARK 465 HIS A 246 REMARK 465 HIS A 247 REMARK 465 HIS A 248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 46 O HOH B 401 2.02 REMARK 500 O HOH A 479 O HOH A 566 2.11 REMARK 500 O HOH B 497 O HOH B 626 2.17 REMARK 500 O HOH A 573 O HOH A 605 2.18 REMARK 500 O HOH A 410 O HOH A 603 2.18 REMARK 500 O HOH A 403 O HOH A 589 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O2 FUC D 2 O HOH B 524 4457 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS B 50 19.35 56.62 REMARK 500 TYR B 218 36.94 -144.77 REMARK 500 CYS A 50 14.68 55.69 REMARK 500 ASN A 104 18.56 58.21 REMARK 500 TYR A 218 36.67 -143.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 629 DISTANCE = 5.91 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 309 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 216 O REMARK 620 2 ASP B 219 OD1 86.7 REMARK 620 3 GLU B 220 OE1 171.9 101.3 REMARK 620 4 GLU B 223 OE1 89.3 72.1 91.8 REMARK 620 5 GLU B 223 OE2 91.5 121.9 83.2 49.8 REMARK 620 6 HOH B 496 O 86.1 81.6 96.3 153.5 156.3 REMARK 620 7 HOH B 568 O 81.5 154.2 91.6 130.2 81.4 74.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 216 O REMARK 620 2 ASP A 219 OD1 84.3 REMARK 620 3 GLU A 220 OE1 172.1 100.1 REMARK 620 4 GLU A 223 OE1 90.0 73.2 97.6 REMARK 620 5 GLU A 223 OE2 89.5 123.2 93.5 50.4 REMARK 620 6 HOH A 492 O 90.1 77.2 84.6 150.2 159.4 REMARK 620 7 HOH A 552 O 83.9 154.0 89.4 129.8 79.7 79.7 REMARK 620 N 1 2 3 4 5 6 DBREF 6YGE B 1 234 UNP Q4WL81 Q4WL81_ASPFU 1 234 DBREF 6YGE A 1 234 UNP Q4WL81 Q4WL81_ASPFU 1 234 SEQADV 6YGE ASP B 235 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE VAL B 236 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE LEU B 237 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE PHE B 238 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE GLN B 239 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE GLY B 240 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE PRO B 241 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE GLY B 242 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS B 243 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS B 244 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS B 245 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS B 246 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS B 247 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS B 248 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE ASP A 235 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE VAL A 236 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE LEU A 237 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE PHE A 238 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE GLN A 239 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE GLY A 240 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE PRO A 241 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE GLY A 242 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS A 243 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS A 244 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS A 245 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS A 246 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS A 247 UNP Q4WL81 EXPRESSION TAG SEQADV 6YGE HIS A 248 UNP Q4WL81 EXPRESSION TAG SEQRES 1 B 248 MET ILE PHE THR ASN ALA ILE LEU VAL ILE SER ALA LEU SEQRES 2 B 248 LEU PRO ALA THR VAL LEU SER LEU GLN HIS THR GLU ASP SEQRES 3 B 248 SER LEU PHE PRO ALA ARG CYS TRP PRO ASP PRO CYS ALA SEQRES 4 B 248 GLY ILE THR PHE GLN ASN ASP THR TYR VAL CYS GLY ASP SEQRES 5 B 248 PRO ARG LEU GLY PRO VAL VAL LEU PRO GLN LYS PHE PRO SEQRES 6 B 248 LEU ASN ASN GLU LEU ARG THR TYR ALA ARG PHE GLY ALA SEQRES 7 B 248 LEU CYS PRO ALA GLU PHE LEU ASP LYS TRP ALA THR ASP SEQRES 8 B 248 VAL ALA PRO ASN GLY THR TYR ILE TYR PRO PRO ALA ASN SEQRES 9 B 248 GLY PHE ALA LEU ASP THR GLU GLU GLN PRO ILE LEU GLY SEQRES 10 B 248 ASN ALA THR LEU PRO VAL GLY MET LYS LEU ASP ARG PHE SEQRES 11 B 248 GLY SER GLU TYR GLY THR PHE LEU ALA PRO LEU GLY ALA SEQRES 12 B 248 PRO TYR ILE GLU ARG SER LEU PRO PRO SER ASN LEU ASN SEQRES 13 B 248 THR PHE ASP GLY MET TYR PRO TYR ASN TYR HIS VAL TYR SEQRES 14 B 248 GLN VAL THR LYS GLU PHE VAL VAL GLY LEU GLY PRO ILE SEQRES 15 B 248 ALA PRO TRP PHE GLU GLN PRO GLY MET GLY THR GLN PHE SEQRES 16 B 248 VAL THR TYR THR ASN VAL LEU GLY LEU ILE ASP ASP GLY SEQRES 17 B 248 TYR LEU ARG ARG LEU ASP GLU SER GLU TYR ASP GLU LYS SEQRES 18 B 248 VAL GLU TYR SER ASN PRO TYR THR PRO GLY PRO ASN GLN SEQRES 19 B 248 ASP VAL LEU PHE GLN GLY PRO GLY HIS HIS HIS HIS HIS SEQRES 20 B 248 HIS SEQRES 1 A 248 MET ILE PHE THR ASN ALA ILE LEU VAL ILE SER ALA LEU SEQRES 2 A 248 LEU PRO ALA THR VAL LEU SER LEU GLN HIS THR GLU ASP SEQRES 3 A 248 SER LEU PHE PRO ALA ARG CYS TRP PRO ASP PRO CYS ALA SEQRES 4 A 248 GLY ILE THR PHE GLN ASN ASP THR TYR VAL CYS GLY ASP SEQRES 5 A 248 PRO ARG LEU GLY PRO VAL VAL LEU PRO GLN LYS PHE PRO SEQRES 6 A 248 LEU ASN ASN GLU LEU ARG THR TYR ALA ARG PHE GLY ALA SEQRES 7 A 248 LEU CYS PRO ALA GLU PHE LEU ASP LYS TRP ALA THR ASP SEQRES 8 A 248 VAL ALA PRO ASN GLY THR TYR ILE TYR PRO PRO ALA ASN SEQRES 9 A 248 GLY PHE ALA LEU ASP THR GLU GLU GLN PRO ILE LEU GLY SEQRES 10 A 248 ASN ALA THR LEU PRO VAL GLY MET LYS LEU ASP ARG PHE SEQRES 11 A 248 GLY SER GLU TYR GLY THR PHE LEU ALA PRO LEU GLY ALA SEQRES 12 A 248 PRO TYR ILE GLU ARG SER LEU PRO PRO SER ASN LEU ASN SEQRES 13 A 248 THR PHE ASP GLY MET TYR PRO TYR ASN TYR HIS VAL TYR SEQRES 14 A 248 GLN VAL THR LYS GLU PHE VAL VAL GLY LEU GLY PRO ILE SEQRES 15 A 248 ALA PRO TRP PHE GLU GLN PRO GLY MET GLY THR GLN PHE SEQRES 16 A 248 VAL THR TYR THR ASN VAL LEU GLY LEU ILE ASP ASP GLY SEQRES 17 A 248 TYR LEU ARG ARG LEU ASP GLU SER GLU TYR ASP GLU LYS SEQRES 18 A 248 VAL GLU TYR SER ASN PRO TYR THR PRO GLY PRO ASN GLN SEQRES 19 A 248 ASP VAL LEU PHE GLN GLY PRO GLY HIS HIS HIS HIS HIS SEQRES 20 A 248 HIS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET FUC C 6 10 HET NAG D 1 14 HET FUC D 2 10 HET NAG E 1 14 HET FUC E 2 10 HET NAG B 301 14 HET NAG B 302 14 HET CA B 309 1 HET ACT B 310 4 HET NAG A 301 14 HET CA A 306 1 HET ACT A 307 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM ACT ACETATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 NAG 7(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN 2(C6 H12 O6) FORMUL 3 FUC 3(C6 H12 O5) FORMUL 8 CA 2(CA 2+) FORMUL 9 ACT 2(C2 H3 O2 1-) FORMUL 13 HOH *476(H2 O) HELIX 1 AA1 PRO B 30 TRP B 34 5 5 HELIX 2 AA2 TYR B 48 GLY B 56 5 9 HELIX 3 AA3 PRO B 65 ARG B 71 1 7 HELIX 4 AA4 CYS B 80 ALA B 89 1 10 HELIX 5 AA5 PRO B 102 PHE B 106 5 5 HELIX 6 AA6 PRO B 144 SER B 149 5 6 HELIX 7 AA7 PRO B 151 ASN B 156 5 6 HELIX 8 AA8 TYR B 162 TYR B 164 5 3 HELIX 9 AA9 ASN B 200 ASP B 207 1 8 HELIX 10 AB1 ASP B 214 TYR B 218 5 5 HELIX 11 AB2 GLU B 220 SER B 225 5 6 HELIX 12 AB3 PRO A 30 TRP A 34 5 5 HELIX 13 AB4 TYR A 48 GLY A 56 5 9 HELIX 14 AB5 PRO A 65 ARG A 71 1 7 HELIX 15 AB6 CYS A 80 ALA A 89 1 10 HELIX 16 AB7 PRO A 102 PHE A 106 5 5 HELIX 17 AB8 PRO A 144 SER A 149 5 6 HELIX 18 AB9 PRO A 151 ASN A 156 5 6 HELIX 19 AC1 TYR A 162 TYR A 164 5 3 HELIX 20 AC2 ASN A 200 ASP A 207 1 8 HELIX 21 AC3 ASP A 214 TYR A 218 5 5 HELIX 22 AC4 GLU A 220 SER A 225 5 6 SHEET 1 AA1 7 GLY B 117 LEU B 121 0 SHEET 2 AA1 7 PHE B 175 PRO B 181 -1 O PHE B 175 N LEU B 121 SHEET 3 AA1 7 THR B 193 VAL B 196 -1 O GLN B 194 N GLY B 180 SHEET 4 AA1 7 PHE B 137 PRO B 140 -1 N LEU B 138 O PHE B 195 SHEET 5 AA1 7 LYS B 126 PHE B 130 -1 N ASP B 128 O ALA B 139 SHEET 6 AA1 7 TYR B 166 VAL B 171 -1 O TYR B 169 N LEU B 127 SHEET 7 AA1 7 LEU B 210 ARG B 212 -1 O ARG B 211 N GLN B 170 SHEET 1 AA2 7 GLY A 117 LEU A 121 0 SHEET 2 AA2 7 PHE A 175 PRO A 181 -1 O PHE A 175 N LEU A 121 SHEET 3 AA2 7 THR A 193 VAL A 196 -1 O VAL A 196 N GLY A 178 SHEET 4 AA2 7 PHE A 137 PRO A 140 -1 N LEU A 138 O PHE A 195 SHEET 5 AA2 7 LYS A 126 PHE A 130 -1 N ASP A 128 O ALA A 139 SHEET 6 AA2 7 TYR A 166 VAL A 171 -1 O TYR A 169 N LEU A 127 SHEET 7 AA2 7 LEU A 210 ARG A 212 -1 O ARG A 211 N GLN A 170 SSBOND 1 CYS B 33 CYS B 80 1555 1555 2.01 SSBOND 2 CYS B 38 CYS B 50 1555 1555 2.06 SSBOND 3 CYS A 33 CYS A 80 1555 1555 2.05 SSBOND 4 CYS A 38 CYS A 50 1555 1555 2.05 LINK ND2 ASN B 45 C1 NAG B 301 1555 1555 1.45 LINK ND2 ASN B 95 C1 NAG B 302 1555 1555 1.44 LINK ND2 ASN B 118 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 45 C1 NAG A 301 1555 1555 1.45 LINK ND2 ASN A 95 C1 NAG D 1 1555 1555 1.46 LINK ND2 ASN A 118 C1 NAG E 1 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.42 LINK O6 NAG C 1 C1 FUC C 6 1555 1555 1.43 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.43 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.44 LINK O6 BMA C 3 C1 MAN C 5 1555 1555 1.44 LINK O6 NAG D 1 C1 FUC D 2 1555 1555 1.43 LINK O6 NAG E 1 C1 FUC E 2 1555 1555 1.43 LINK O SER B 216 CA CA B 309 1555 1555 2.33 LINK OD1 ASP B 219 CA CA B 309 1555 1555 2.29 LINK OE1 GLU B 220 CA CA B 309 1555 1555 2.28 LINK OE1 GLU B 223 CA CA B 309 1555 1555 2.72 LINK OE2 GLU B 223 CA CA B 309 1555 1555 2.45 LINK CA CA B 309 O HOH B 496 1555 1555 2.22 LINK CA CA B 309 O HOH B 568 1555 1555 2.40 LINK O SER A 216 CA CA A 306 1555 1555 2.32 LINK OD1 ASP A 219 CA CA A 306 1555 1555 2.34 LINK OE1 GLU A 220 CA CA A 306 1555 1555 2.23 LINK OE1 GLU A 223 CA CA A 306 1555 1555 2.66 LINK OE2 GLU A 223 CA CA A 306 1555 1555 2.45 LINK CA CA A 306 O HOH A 492 1555 1555 2.47 LINK CA CA A 306 O HOH A 552 1555 1555 2.39 CISPEP 1 TRP B 34 PRO B 35 0 -4.35 CISPEP 2 PHE B 64 PRO B 65 0 1.94 CISPEP 3 TRP A 34 PRO A 35 0 8.36 CISPEP 4 PHE A 64 PRO A 65 0 1.98 CRYST1 63.788 63.788 257.995 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015677 0.009051 0.000000 0.00000 SCALE2 0.000000 0.018102 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003876 0.00000