data_6YHZ # _entry.id 6YHZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YHZ pdb_00006yhz 10.2210/pdb6yhz/pdb WWPDB D_1292107655 ? ? BMRB 50219 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 50219 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6YHZ _pdbx_database_status.recvd_initial_deposition_date 2020-03-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kawale, A.A.' 1 0000-0002-5074-680X 'Burmann, B.B.' 2 0000-0002-3135-7964 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Commun Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2399-3642 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 3 _citation.language ? _citation.page_first 607 _citation.page_last 607 _citation.title ;UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s42003-020-01332-2 _citation.pdbx_database_id_PubMed 33097771 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kawale, A.A.' 1 0000-0002-5074-680X primary 'Burmann, B.M.' 2 0000-0002-3135-7964 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Transcription-repair-coupling factor' _entity.formula_weight 8110.204 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.6.4.- _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name TRCF # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGG _entity_poly.pdbx_seq_one_letter_code_can RNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ASN n 1 3 LEU n 1 4 ALA n 1 5 GLU n 1 6 LEU n 1 7 HIS n 1 8 ILE n 1 9 GLY n 1 10 GLN n 1 11 PRO n 1 12 VAL n 1 13 VAL n 1 14 HIS n 1 15 LEU n 1 16 GLU n 1 17 HIS n 1 18 GLY n 1 19 VAL n 1 20 GLY n 1 21 ARG n 1 22 TYR n 1 23 ALA n 1 24 GLY n 1 25 MET n 1 26 THR n 1 27 THR n 1 28 LEU n 1 29 GLU n 1 30 ALA n 1 31 GLY n 1 32 GLY n 1 33 ILE n 1 34 THR n 1 35 GLY n 1 36 GLU n 1 37 TYR n 1 38 LEU n 1 39 MET n 1 40 LEU n 1 41 THR n 1 42 TYR n 1 43 ALA n 1 44 ASN n 1 45 ASP n 1 46 ALA n 1 47 LYS n 1 48 LEU n 1 49 TYR n 1 50 VAL n 1 51 PRO n 1 52 VAL n 1 53 SER n 1 54 SER n 1 55 LEU n 1 56 HIS n 1 57 LEU n 1 58 ILE n 1 59 SER n 1 60 ARG n 1 61 TYR n 1 62 ALA n 1 63 GLY n 1 64 GLY n 1 65 ALA n 1 66 GLU n 1 67 GLU n 1 68 ASN n 1 69 ALA n 1 70 PRO n 1 71 LEU n 1 72 HIS n 1 73 LYS n 1 74 LEU n 1 75 GLY n 1 76 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 76 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mfd, ELT49_18965' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant 'BL21 StarTM (DE3)' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A5F0Q0Z8_ECOLX _struct_ref.pdbx_db_accession A0A5F0Q0Z8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGG _struct_ref.pdbx_align_begin 472 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YHZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 76 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A5F0Q0Z8 _struct_ref_seq.db_align_beg 472 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 547 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 472 _struct_ref_seq.pdbx_auth_seq_align_end 547 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-13C HSQC aliphatic' 1 isotropic 3 1 1 '2D 1H-13C HSQC aromatic' 1 isotropic 4 1 1 '3D CBCA(CO)NH' 1 isotropic 5 1 1 '3D 1H-13C NOESY aliphatic' 1 isotropic 11 1 1 '3D 1H-13C NOESY aromatic' 1 isotropic 10 1 1 '3D 1H-15N NOESY' 1 isotropic 9 1 1 '3D HNCACB' 1 isotropic 8 1 1 '3D HNCA' 1 isotropic 7 1 1 '3D HNCO' 1 isotropic 6 1 1 '3D C(CO)NH' 1 isotropic 16 1 1 '3D HBHA(CO)NH' 1 isotropic 15 1 1 '3D H(CCO)NH' 1 isotropic 14 1 1 '3D HCCH-TOCSY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.4 _pdbx_nmr_exptl_sample_conditions.ionic_strength 152 _pdbx_nmr_exptl_sample_conditions.details '1x PBS buffer' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err 162.7 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label PBS _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '600 uM [U-100% 13C; U-100% 15N] Mfd RID, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 13C15N _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 700 ? 2 AVANCE ? Bruker 800 ? # _pdbx_nmr_refine.entry_id 6YHZ _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 3 # _pdbx_nmr_ensemble.entry_id 6YHZ _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6YHZ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'chemical shift assignment' Sparky 1.413 Goddard 2 'structure calculation' CYANA 3.98.12 'Guntert, Mumenthaler and Wuthrich' 3 refinement ARIA 2.3 ;Linge, O'Donoghue and Nilges ; # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YHZ _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6YHZ _struct.title 'UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YHZ _struct_keywords.text 'DNA-repair, Tudor, TCR, MfD, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 43 ? ASP A 45 ? ALA A 514 ASP A 516 5 ? 3 HELX_P HELX_P2 AA2 SER A 54 ? HIS A 56 ? SER A 525 HIS A 527 5 ? 3 HELX_P HELX_P3 AA3 ALA A 65 ? ALA A 69 ? ALA A 536 ALA A 540 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 47 ? PRO A 51 ? LYS A 518 PRO A 522 AA1 2 THR A 34 ? THR A 41 ? THR A 505 THR A 512 AA1 3 GLY A 18 ? GLU A 29 ? GLY A 489 GLU A 500 AA1 4 PRO A 11 ? HIS A 14 ? PRO A 482 HIS A 485 AA1 5 ILE A 58 ? ARG A 60 ? ILE A 529 ARG A 531 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O VAL A 50 ? O VAL A 521 N LEU A 38 ? N LEU A 509 AA1 2 3 O THR A 41 ? O THR A 512 N ARG A 21 ? N ARG A 492 AA1 3 4 O GLY A 20 ? O GLY A 491 N VAL A 12 ? N VAL A 483 AA1 4 5 N VAL A 13 ? N VAL A 484 O SER A 59 ? O SER A 530 # _atom_sites.entry_id 6YHZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 472 472 ARG ARG A . n A 1 2 ASN 2 473 473 ASN ASN A . n A 1 3 LEU 3 474 474 LEU LEU A . n A 1 4 ALA 4 475 475 ALA ALA A . n A 1 5 GLU 5 476 476 GLU GLU A . n A 1 6 LEU 6 477 477 LEU LEU A . n A 1 7 HIS 7 478 478 HIS HIS A . n A 1 8 ILE 8 479 479 ILE ILE A . n A 1 9 GLY 9 480 480 GLY GLY A . n A 1 10 GLN 10 481 481 GLN GLN A . n A 1 11 PRO 11 482 482 PRO PRO A . n A 1 12 VAL 12 483 483 VAL VAL A . n A 1 13 VAL 13 484 484 VAL VAL A . n A 1 14 HIS 14 485 485 HIS HIS A . n A 1 15 LEU 15 486 486 LEU LEU A . n A 1 16 GLU 16 487 487 GLU GLU A . n A 1 17 HIS 17 488 488 HIS HIS A . n A 1 18 GLY 18 489 489 GLY GLY A . n A 1 19 VAL 19 490 490 VAL VAL A . n A 1 20 GLY 20 491 491 GLY GLY A . n A 1 21 ARG 21 492 492 ARG ARG A . n A 1 22 TYR 22 493 493 TYR TYR A . n A 1 23 ALA 23 494 494 ALA ALA A . n A 1 24 GLY 24 495 495 GLY GLY A . n A 1 25 MET 25 496 496 MET MET A . n A 1 26 THR 26 497 497 THR THR A . n A 1 27 THR 27 498 498 THR THR A . n A 1 28 LEU 28 499 499 LEU LEU A . n A 1 29 GLU 29 500 500 GLU GLU A . n A 1 30 ALA 30 501 501 ALA ALA A . n A 1 31 GLY 31 502 502 GLY GLY A . n A 1 32 GLY 32 503 503 GLY GLY A . n A 1 33 ILE 33 504 504 ILE ILE A . n A 1 34 THR 34 505 505 THR THR A . n A 1 35 GLY 35 506 506 GLY GLY A . n A 1 36 GLU 36 507 507 GLU GLU A . n A 1 37 TYR 37 508 508 TYR TYR A . n A 1 38 LEU 38 509 509 LEU LEU A . n A 1 39 MET 39 510 510 MET MET A . n A 1 40 LEU 40 511 511 LEU LEU A . n A 1 41 THR 41 512 512 THR THR A . n A 1 42 TYR 42 513 513 TYR TYR A . n A 1 43 ALA 43 514 514 ALA ALA A . n A 1 44 ASN 44 515 515 ASN ASN A . n A 1 45 ASP 45 516 516 ASP ASP A . n A 1 46 ALA 46 517 517 ALA ALA A . n A 1 47 LYS 47 518 518 LYS LYS A . n A 1 48 LEU 48 519 519 LEU LEU A . n A 1 49 TYR 49 520 520 TYR TYR A . n A 1 50 VAL 50 521 521 VAL VAL A . n A 1 51 PRO 51 522 522 PRO PRO A . n A 1 52 VAL 52 523 523 VAL VAL A . n A 1 53 SER 53 524 524 SER SER A . n A 1 54 SER 54 525 525 SER SER A . n A 1 55 LEU 55 526 526 LEU LEU A . n A 1 56 HIS 56 527 527 HIS HIS A . n A 1 57 LEU 57 528 528 LEU LEU A . n A 1 58 ILE 58 529 529 ILE ILE A . n A 1 59 SER 59 530 530 SER SER A . n A 1 60 ARG 60 531 531 ARG ARG A . n A 1 61 TYR 61 532 532 TYR TYR A . n A 1 62 ALA 62 533 533 ALA ALA A . n A 1 63 GLY 63 534 534 GLY GLY A . n A 1 64 GLY 64 535 535 GLY GLY A . n A 1 65 ALA 65 536 536 ALA ALA A . n A 1 66 GLU 66 537 537 GLU GLU A . n A 1 67 GLU 67 538 538 GLU GLU A . n A 1 68 ASN 68 539 539 ASN ASN A . n A 1 69 ALA 69 540 540 ALA ALA A . n A 1 70 PRO 70 541 541 PRO PRO A . n A 1 71 LEU 71 542 542 LEU LEU A . n A 1 72 HIS 72 543 543 HIS HIS A . n A 1 73 LYS 73 544 544 LYS LYS A . n A 1 74 LEU 74 545 545 LEU LEU A . n A 1 75 GLY 75 546 546 GLY GLY A . n A 1 76 GLY 76 547 547 GLY GLY A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 4780 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-10-21 2 'Structure model' 1 1 2020-11-18 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.name' 13 3 'Structure model' '_database_2.pdbx_DOI' 14 3 'Structure model' '_database_2.pdbx_database_accession' 15 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component 'Mfd RID' _pdbx_nmr_exptl_sample.concentration 600 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units uM _pdbx_nmr_exptl_sample.isotopic_labeling '[U-100% 13C; U-100% 15N]' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 474 ? ? 62.19 -163.42 2 1 ALA A 475 ? ? 69.86 -56.41 3 1 GLU A 476 ? ? -78.69 32.24 4 1 TYR A 513 ? ? -111.69 -163.65 5 2 GLU A 476 ? ? -86.99 30.32 6 2 ALA A 533 ? ? 67.68 -66.08 7 3 ASN A 473 ? ? -154.19 -41.83 8 3 LEU A 474 ? ? 59.64 -157.24 9 3 ALA A 475 ? ? 71.76 -47.27 10 3 GLU A 476 ? ? -89.22 30.58 11 3 TYR A 513 ? ? -108.65 -168.16 12 3 TYR A 532 ? ? -52.02 -75.63 13 3 ALA A 533 ? ? 57.38 -166.64 14 3 LEU A 545 ? ? -100.11 67.30 15 4 TYR A 513 ? ? -112.76 -169.71 16 5 ASN A 473 ? ? 75.77 -126.28 17 5 LEU A 474 ? ? 72.41 157.24 18 5 ALA A 475 ? ? 69.84 -63.12 19 5 GLU A 476 ? ? -86.07 31.64 20 5 TYR A 513 ? ? -109.44 -162.73 21 5 ALA A 536 ? ? -143.89 41.60 22 6 ALA A 536 ? ? -140.99 28.75 23 7 ASN A 473 ? ? -141.08 -21.12 24 7 LEU A 474 ? ? 54.73 -148.00 25 7 ALA A 475 ? ? 68.90 -66.31 26 7 GLU A 476 ? ? -82.60 30.05 27 7 LEU A 545 ? ? -110.47 60.90 28 8 LEU A 474 ? ? -99.99 58.66 29 8 GLU A 476 ? ? -99.19 31.53 30 8 TYR A 513 ? ? -107.97 -166.59 31 8 ALA A 536 ? ? -86.09 46.18 32 9 LEU A 474 ? ? 57.49 -146.17 33 9 ALA A 475 ? ? 72.25 -49.63 34 9 GLU A 476 ? ? -79.77 31.24 35 9 TYR A 513 ? ? -111.72 -161.83 36 10 TYR A 513 ? ? -106.34 -167.34 37 10 TYR A 532 ? ? -55.95 109.97 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swedish Research Council' Sweden 2016-04721 1 'Knut and Alice Wallenberg Foundation' Sweden 2016.0163 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details monomer #