data_6YI2 # _entry.id 6YI2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YI2 pdb_00006yi2 10.2210/pdb6yi2/pdb WWPDB D_1292107661 ? ? BMRB 50218 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 50218 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6YI2 _pdbx_database_status.recvd_initial_deposition_date 2020-03-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kawale, A.A.' 1 0000-0002-5074-680X 'Burmann, B.B.' 2 0000-0002-3135-7964 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Commun Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2399-3642 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 3 _citation.language ? _citation.page_first 607 _citation.page_last 607 _citation.title ;UvrD helicase-RNA polymerase interactions are governed by UvrD's carboxy-terminal Tudor domain. ; _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s42003-020-01332-2 _citation.pdbx_database_id_PubMed 33097771 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kawale, A.A.' 1 0000-0002-5074-680X primary 'Burmann, B.M.' 2 0000-0002-3135-7964 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'DNA helicase' _entity.formula_weight 8452.634 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.6.4.12 _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV _entity_poly.pdbx_seq_one_letter_code_can RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 LEU n 1 3 ARG n 1 4 ALA n 1 5 THR n 1 6 VAL n 1 7 SER n 1 8 ARG n 1 9 PRO n 1 10 VAL n 1 11 SER n 1 12 HIS n 1 13 GLN n 1 14 ARG n 1 15 MET n 1 16 GLY n 1 17 THR n 1 18 PRO n 1 19 MET n 1 20 VAL n 1 21 GLU n 1 22 ASN n 1 23 ASP n 1 24 SER n 1 25 GLY n 1 26 TYR n 1 27 LYS n 1 28 LEU n 1 29 GLY n 1 30 GLN n 1 31 ARG n 1 32 VAL n 1 33 ARG n 1 34 HIS n 1 35 ALA n 1 36 LYS n 1 37 PHE n 1 38 GLY n 1 39 GLU n 1 40 GLY n 1 41 THR n 1 42 ILE n 1 43 VAL n 1 44 ASN n 1 45 MET n 1 46 GLU n 1 47 GLY n 1 48 SER n 1 49 GLY n 1 50 GLU n 1 51 HIS n 1 52 SER n 1 53 ARG n 1 54 LEU n 1 55 GLN n 1 56 VAL n 1 57 ALA n 1 58 PHE n 1 59 GLN n 1 60 GLY n 1 61 GLN n 1 62 GLY n 1 63 ILE n 1 64 LYS n 1 65 TRP n 1 66 LEU n 1 67 VAL n 1 68 ALA n 1 69 ALA n 1 70 TYR n 1 71 ALA n 1 72 ARG n 1 73 LEU n 1 74 GLU n 1 75 SER n 1 76 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 76 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'uvrD, ACU57_06555' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant pLysS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A0P7NW33_ECOLX _struct_ref.pdbx_db_accession A0A0P7NW33 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV _struct_ref.pdbx_align_begin 645 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YI2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 76 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A0P7NW33 _struct_ref_seq.db_align_beg 645 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 720 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 645 _struct_ref_seq.pdbx_auth_seq_align_end 720 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 2 isotropic 2 1 1 '2D 1H-13C HSQC aliphatic' 2 isotropic 3 1 1 '2D 1H-13C HSQC aromatic' 2 isotropic 4 1 1 '3D CBCA(CO)NH' 2 isotropic 5 1 1 '3D HNCACB' 2 isotropic 6 1 1 '3D HNCA' 2 isotropic 7 1 1 '3D HNCO' 2 isotropic 9 1 1 '3D HCCH-TOCSY' 1 isotropic 8 1 1 '3D 1H-15N NOESY' 1 isotropic 10 1 1 '3D 1H-13C NOESY aliphatic' 1 isotropic 11 1 1 '3D 1H-13C NOESY aromatic' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 310 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 70 _pdbx_nmr_exptl_sample_conditions.details '20 mM KPi, 50 mM KCl pH 6.5' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 'UvrD sample buffer' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '650 uM [U-13C; U-15N] UvrD CTD, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 13C15N _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III' ? Bruker 700 ? 2 'AVANCE III' ? Bruker 800 ? # _pdbx_nmr_refine.entry_id 6YI2 _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6YI2 _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6YI2 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement ARIA 2.3 ;Linge, O'Donoghue and Nilges ; 2 'structure calculation' CYANA 3.98.12 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' Sparky 1.413 Goddard # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YI2 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6YI2 _struct.title 'UvrD helicase RNA polymerase interactions are governed by UvrDs carboxy terminal Tudor domain.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YI2 _struct_keywords.text 'DNA-repair, Tudor, UvrD, TCR, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 48 ? HIS A 51 ? SER A 692 HIS A 695 5 ? 4 HELX_P HELX_P2 AA2 ALA A 68 ? ARG A 72 ? ALA A 712 ARG A 716 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 63 ? VAL A 67 ? ILE A 707 VAL A 711 AA1 2 ARG A 53 ? PHE A 58 ? ARG A 697 PHE A 702 AA1 3 GLY A 38 ? GLU A 46 ? GLY A 682 GLU A 690 AA1 4 ARG A 31 ? HIS A 34 ? ARG A 675 HIS A 678 AA1 5 GLU A 74 ? SER A 75 ? GLU A 718 SER A 719 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 66 ? O LEU A 710 N LEU A 54 ? N LEU A 698 AA1 2 3 O ALA A 57 ? O ALA A 701 N THR A 41 ? N THR A 685 AA1 3 4 O GLY A 40 ? O GLY A 684 N VAL A 32 ? N VAL A 676 AA1 4 5 N ARG A 33 ? N ARG A 677 O GLU A 74 ? O GLU A 718 # _atom_sites.entry_id 6YI2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 645 645 ARG ARG A . n A 1 2 LEU 2 646 646 LEU LEU A . n A 1 3 ARG 3 647 647 ARG ARG A . n A 1 4 ALA 4 648 648 ALA ALA A . n A 1 5 THR 5 649 649 THR THR A . n A 1 6 VAL 6 650 650 VAL VAL A . n A 1 7 SER 7 651 651 SER SER A . n A 1 8 ARG 8 652 652 ARG ARG A . n A 1 9 PRO 9 653 653 PRO PRO A . n A 1 10 VAL 10 654 654 VAL VAL A . n A 1 11 SER 11 655 655 SER SER A . n A 1 12 HIS 12 656 656 HIS HIS A . n A 1 13 GLN 13 657 657 GLN GLN A . n A 1 14 ARG 14 658 658 ARG ARG A . n A 1 15 MET 15 659 659 MET MET A . n A 1 16 GLY 16 660 660 GLY GLY A . n A 1 17 THR 17 661 661 THR THR A . n A 1 18 PRO 18 662 662 PRO PRO A . n A 1 19 MET 19 663 663 MET MET A . n A 1 20 VAL 20 664 664 VAL VAL A . n A 1 21 GLU 21 665 665 GLU GLU A . n A 1 22 ASN 22 666 666 ASN ASN A . n A 1 23 ASP 23 667 667 ASP ASP A . n A 1 24 SER 24 668 668 SER SER A . n A 1 25 GLY 25 669 669 GLY GLY A . n A 1 26 TYR 26 670 670 TYR TYR A . n A 1 27 LYS 27 671 671 LYS LYS A . n A 1 28 LEU 28 672 672 LEU LEU A . n A 1 29 GLY 29 673 673 GLY GLY A . n A 1 30 GLN 30 674 674 GLN GLN A . n A 1 31 ARG 31 675 675 ARG ARG A . n A 1 32 VAL 32 676 676 VAL VAL A . n A 1 33 ARG 33 677 677 ARG ARG A . n A 1 34 HIS 34 678 678 HIS HIS A . n A 1 35 ALA 35 679 679 ALA ALA A . n A 1 36 LYS 36 680 680 LYS LYS A . n A 1 37 PHE 37 681 681 PHE PHE A . n A 1 38 GLY 38 682 682 GLY GLY A . n A 1 39 GLU 39 683 683 GLU GLU A . n A 1 40 GLY 40 684 684 GLY GLY A . n A 1 41 THR 41 685 685 THR THR A . n A 1 42 ILE 42 686 686 ILE ILE A . n A 1 43 VAL 43 687 687 VAL VAL A . n A 1 44 ASN 44 688 688 ASN ASN A . n A 1 45 MET 45 689 689 MET MET A . n A 1 46 GLU 46 690 690 GLU GLU A . n A 1 47 GLY 47 691 691 GLY GLY A . n A 1 48 SER 48 692 692 SER SER A . n A 1 49 GLY 49 693 693 GLY GLY A . n A 1 50 GLU 50 694 694 GLU GLU A . n A 1 51 HIS 51 695 695 HIS HIS A . n A 1 52 SER 52 696 696 SER SER A . n A 1 53 ARG 53 697 697 ARG ARG A . n A 1 54 LEU 54 698 698 LEU LEU A . n A 1 55 GLN 55 699 699 GLN GLN A . n A 1 56 VAL 56 700 700 VAL VAL A . n A 1 57 ALA 57 701 701 ALA ALA A . n A 1 58 PHE 58 702 702 PHE PHE A . n A 1 59 GLN 59 703 703 GLN GLN A . n A 1 60 GLY 60 704 704 GLY GLY A . n A 1 61 GLN 61 705 705 GLN GLN A . n A 1 62 GLY 62 706 706 GLY GLY A . n A 1 63 ILE 63 707 707 ILE ILE A . n A 1 64 LYS 64 708 708 LYS LYS A . n A 1 65 TRP 65 709 709 TRP TRP A . n A 1 66 LEU 66 710 710 LEU LEU A . n A 1 67 VAL 67 711 711 VAL VAL A . n A 1 68 ALA 68 712 712 ALA ALA A . n A 1 69 ALA 69 713 713 ALA ALA A . n A 1 70 TYR 70 714 714 TYR TYR A . n A 1 71 ALA 71 715 715 ALA ALA A . n A 1 72 ARG 72 716 716 ARG ARG A . n A 1 73 LEU 73 717 717 LEU LEU A . n A 1 74 GLU 74 718 718 GLU GLU A . n A 1 75 SER 75 719 719 SER SER A . n A 1 76 VAL 76 720 720 VAL VAL A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 6360 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-10-21 2 'Structure model' 1 1 2020-11-18 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.name' 13 3 'Structure model' '_database_2.pdbx_DOI' 14 3 'Structure model' '_database_2.pdbx_database_accession' 15 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component 'UvrD CTD' _pdbx_nmr_exptl_sample.concentration 650 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units uM _pdbx_nmr_exptl_sample.isotopic_labeling '[U-13C; U-15N]' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 3 _pdbx_validate_close_contact.auth_atom_id_1 HH12 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 658 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 VAL _pdbx_validate_close_contact.auth_seq_id_2 720 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 662 ? ? -73.57 49.88 2 1 GLN A 705 ? ? -158.45 -75.64 3 2 ALA A 648 ? ? -147.97 54.76 4 2 VAL A 650 ? ? 70.75 -73.59 5 2 VAL A 654 ? ? 57.58 78.14 6 2 MET A 659 ? ? 62.15 -162.35 7 2 MET A 663 ? ? -83.99 46.64 8 2 ASP A 667 ? ? 71.92 121.90 9 2 HIS A 695 ? ? -85.24 37.37 10 2 GLN A 705 ? ? -153.55 -68.54 11 2 ARG A 716 ? ? 53.67 73.99 12 3 ARG A 647 ? ? -90.23 32.52 13 3 SER A 651 ? ? -87.74 31.93 14 3 VAL A 654 ? ? 76.06 -32.37 15 3 ASN A 666 ? ? -124.41 -167.53 16 3 HIS A 695 ? ? -87.18 37.88 17 3 ARG A 716 ? ? 55.63 72.37 18 4 THR A 649 ? ? 178.46 153.19 19 4 SER A 655 ? ? -100.39 61.54 20 4 GLN A 657 ? ? -129.53 -50.38 21 4 ARG A 658 ? ? -107.07 46.77 22 4 MET A 659 ? ? 73.88 -45.71 23 4 ASN A 666 ? ? -100.90 52.49 24 4 GLN A 705 ? ? -135.26 -82.90 25 5 LEU A 646 ? ? -137.51 -71.47 26 5 SER A 651 ? ? -160.06 -71.53 27 5 SER A 655 ? ? -93.98 41.63 28 5 MET A 663 ? ? 63.55 100.12 29 5 ASN A 666 ? ? -148.88 -62.84 30 5 HIS A 695 ? ? -95.36 31.03 31 5 GLN A 705 ? ? -146.64 -54.15 32 6 ALA A 648 ? ? 55.84 77.12 33 6 THR A 649 ? ? -82.87 37.83 34 6 SER A 651 ? ? -161.43 -55.52 35 6 VAL A 654 ? ? 60.69 79.38 36 6 ARG A 658 ? ? -68.45 -77.10 37 6 ASP A 667 ? ? 68.16 126.59 38 6 GLN A 705 ? ? -113.69 -76.04 39 6 ARG A 716 ? ? 58.82 77.76 40 7 ARG A 652 ? ? 60.27 80.33 41 7 SER A 655 ? ? 61.59 -83.58 42 7 ARG A 658 ? ? 57.62 73.03 43 7 MET A 663 ? ? 66.21 -176.43 44 7 GLU A 665 ? ? -157.10 -76.37 45 7 ASP A 667 ? ? 66.63 136.98 46 7 SER A 668 ? ? -80.89 37.00 47 7 GLN A 705 ? ? -134.59 -79.19 48 8 ALA A 648 ? ? 65.01 -80.71 49 8 VAL A 650 ? ? -165.63 -37.60 50 8 PRO A 653 ? ? -62.03 91.19 51 8 VAL A 654 ? ? 72.53 121.44 52 8 SER A 692 ? ? -173.70 126.14 53 8 HIS A 695 ? ? -81.92 37.50 54 8 GLN A 705 ? ? -150.78 -55.61 55 8 ARG A 716 ? ? 57.17 76.43 56 9 ARG A 647 ? ? 62.32 98.77 57 9 SER A 651 ? ? -150.67 -57.93 58 9 ARG A 652 ? ? 56.17 76.12 59 9 GLU A 665 ? ? 61.08 71.88 60 9 ASP A 667 ? ? 63.53 -162.84 61 9 GLN A 705 ? ? -157.21 -80.04 62 10 ARG A 647 ? ? -88.65 40.04 63 10 ALA A 648 ? ? -155.32 68.30 64 10 ARG A 658 ? ? 66.50 -80.74 65 10 MET A 659 ? ? 54.04 74.63 66 10 GLU A 665 ? ? -111.62 72.31 67 10 ASN A 666 ? ? -117.84 71.40 68 10 GLN A 705 ? ? -166.78 -23.57 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Swedish Research Council' Sweden 2016-04721 1 'Knut and Alice Wallenberg Foundation' Sweden 2016.0163 2 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details monomer #