HEADER CELL CYCLE 01-APR-20 6YIF TITLE STRUCTURE OF CHROMOSOMAL PASSENGER COMPLEX (CPC) BOUND TO TITLE 2 PHOSPHORYLATED HISTONE 3 PEPTIDE AT 1.8 A. COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: APOPTOSIS INHIBITOR 4,APOPTOSIS INHIBITOR SURVIVIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BOREALIN; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: CELL DIVISION CYCLE-ASSOCIATED PROTEIN 8,DASRA-B,HDASRA-B, COMPND 10 PLURIPOTENT EMBRYONIC STEM CELL-RELATED GENE 3 PROTEIN; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: INNER CENTROMERE PROTEIN; COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: PHOSPHORYLATED (THR3) HISTONE H3; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BIRC5, API4, IAP4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS (RIL); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETDUET1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: CDCA8, PESCRG3; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_VARIANT: CODONPLUS (RIL); SOURCE 19 EXPRESSION_SYSTEM_CELL: BL21 CODONPLUS (DE3) RIL; SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PETDUET1; SOURCE 22 MOL_ID: 3; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: INCENP; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 28 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 29 EXPRESSION_SYSTEM_VARIANT: CODONPLUS (RIL); SOURCE 30 EXPRESSION_SYSTEM_CELL: BL21 CODONPLUS (DE3) RIL; SOURCE 31 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 32 EXPRESSION_SYSTEM_PLASMID: PFAT2-HIS6-GST; SOURCE 33 MOL_ID: 4; SOURCE 34 SYNTHETIC: YES; SOURCE 35 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 36 ORGANISM_COMMON: HUMAN; SOURCE 37 ORGANISM_TAXID: 9606 KEYWDS CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR M.SERENA,P.R.ELLIOTT,F.A.BARR REVDAT 2 24-JAN-24 6YIF 1 REMARK REVDAT 1 13-MAY-20 6YIF 0 JRNL AUTH M.SERENA,R.N.BASTOS,P.R.ELLIOTT,F.A.BARR JRNL TITL MOLECULAR BASIS OF MKLP2-DEPENDENT AURORA B TRANSPORT FROM JRNL TITL 2 CHROMATIN TO THE ANAPHASE CENTRAL SPINDLE. JRNL REF J.CELL BIOL. V. 219 2020 JRNL REFN ESSN 1540-8140 JRNL PMID 32356865 JRNL DOI 10.1083/JCB.201910059 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 28270 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4300 - 3.9000 0.98 2738 148 0.1690 0.2065 REMARK 3 2 3.9000 - 3.0900 0.99 2712 139 0.1624 0.2318 REMARK 3 3 3.0900 - 2.7000 0.99 2695 147 0.1644 0.1893 REMARK 3 4 2.7000 - 2.4600 0.99 2688 154 0.1599 0.2035 REMARK 3 5 2.4600 - 2.2800 0.99 2692 151 0.1655 0.1893 REMARK 3 6 2.2800 - 2.1500 0.98 2619 161 0.1889 0.2464 REMARK 3 7 2.1500 - 2.0400 0.99 2705 135 0.1981 0.2423 REMARK 3 8 2.0400 - 1.9500 0.99 2682 126 0.2324 0.2435 REMARK 3 9 1.9500 - 1.8700 0.98 2646 140 0.3023 0.3420 REMARK 3 10 1.8700 - 1.8100 0.98 2657 135 0.3115 0.3533 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.818 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1927 REMARK 3 ANGLE : 1.149 2603 REMARK 3 CHIRALITY : 0.052 275 REMARK 3 PLANARITY : 0.009 338 REMARK 3 DIHEDRAL : 5.408 1570 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 5 THROUGH 134) REMARK 3 ORIGIN FOR THE GROUP (A): 22.3713 -34.7783 5.0442 REMARK 3 T TENSOR REMARK 3 T11: 0.1728 T22: 0.2281 REMARK 3 T33: 0.2501 T12: -0.0211 REMARK 3 T13: -0.0074 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 3.6068 L22: 1.3655 REMARK 3 L33: 0.7642 L12: 1.0194 REMARK 3 L13: -1.6199 L23: 0.0716 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: 0.0105 S13: -0.1467 REMARK 3 S21: -0.0561 S22: -0.0698 S23: 0.2956 REMARK 3 S31: 0.1088 S32: -0.2600 S33: 0.1078 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 21 THROUGH 76) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0585 -26.4809 -6.8177 REMARK 3 T TENSOR REMARK 3 T11: 0.1993 T22: 0.1705 REMARK 3 T33: 0.1460 T12: 0.0191 REMARK 3 T13: -0.0499 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 3.3118 L22: 2.0835 REMARK 3 L33: 3.3746 L12: -0.4729 REMARK 3 L13: 0.8429 L23: 0.5760 REMARK 3 S TENSOR REMARK 3 S11: 0.0329 S12: 0.4777 S13: 0.0335 REMARK 3 S21: -0.4602 S22: -0.1856 S23: 0.2723 REMARK 3 S31: -0.1975 S32: -0.1008 S33: 0.0995 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 7 THROUGH 43) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5138 -16.4542 -12.1917 REMARK 3 T TENSOR REMARK 3 T11: 0.7151 T22: 0.4239 REMARK 3 T33: 0.4351 T12: 0.2230 REMARK 3 T13: -0.2078 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 5.9049 L22: 1.3172 REMARK 3 L33: 8.3665 L12: -0.9669 REMARK 3 L13: 5.4755 L23: -2.1479 REMARK 3 S TENSOR REMARK 3 S11: -0.3136 S12: 0.4707 S13: 0.7086 REMARK 3 S21: -0.6220 S22: -0.1577 S23: 0.3771 REMARK 3 S31: -1.0226 S32: -0.4509 S33: 0.4788 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 1 THROUGH 5) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5167 -37.3104 -2.6367 REMARK 3 T TENSOR REMARK 3 T11: 0.3280 T22: 0.6985 REMARK 3 T33: 0.4271 T12: -0.0635 REMARK 3 T13: 0.0288 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 2.0082 L22: 2.0089 REMARK 3 L33: 2.0147 L12: -0.1569 REMARK 3 L13: -3.1711 L23: -3.4670 REMARK 3 S TENSOR REMARK 3 S11: 0.2820 S12: 1.2004 S13: 0.4576 REMARK 3 S21: -0.4789 S22: 0.3269 S23: 0.7295 REMARK 3 S31: -0.2030 S32: -1.7421 S33: -0.5625 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YIF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107688. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96859 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28454 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 49.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.95300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2QFA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % (W/V) PEG 4,000, 200 MM LITHIUM REMARK 280 SULPHATE, 50 MM MES PH 6.5, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.37800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.68900 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.03350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 9.34450 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 46.72250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 ILE A 135 REMARK 465 GLU A 136 REMARK 465 GLN A 137 REMARK 465 LEU A 138 REMARK 465 ALA A 139 REMARK 465 ALA A 140 REMARK 465 MET A 141 REMARK 465 ASP A 142 REMARK 465 VAL B 10 REMARK 465 ALA B 11 REMARK 465 LYS B 12 REMARK 465 THR B 13 REMARK 465 ASN B 14 REMARK 465 SER B 15 REMARK 465 LEU B 16 REMARK 465 ARG B 17 REMARK 465 ARG B 18 REMARK 465 ARG B 19 REMARK 465 LYS B 20 REMARK 465 MET C 44 REMARK 465 PHE C 45 REMARK 465 THR C 46 REMARK 465 ARG C 47 REMARK 465 GLU C 48 REMARK 465 PHE C 49 REMARK 465 SER C 50 REMARK 465 LYS C 51 REMARK 465 GLU C 52 REMARK 465 PRO C 53 REMARK 465 GLU C 54 REMARK 465 LEU C 55 REMARK 465 MET C 56 REMARK 465 PRO C 57 REMARK 465 THR D 6 REMARK 465 ALA D 7 REMARK 465 ARG D 8 REMARK 465 LYS D 9 REMARK 465 SER D 10 REMARK 465 THR D 11 REMARK 465 GLY D 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 126 CG CD OE1 OE2 REMARK 470 LYS A 129 CG CD CE NZ REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 ARG A 133 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 21 CG CD1 CD2 REMARK 470 SER B 23 OG REMARK 470 ASP B 27 CG OD1 OD2 REMARK 470 ARG B 30 NE CZ NH1 NH2 REMARK 470 GLU C 35 CG CD OE1 OE2 REMARK 470 GLU C 39 CG CD OE1 OE2 REMARK 470 ARG C 43 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 377 O HOH A 397 2.17 REMARK 500 OD1 ASP B 72 O HOH B 201 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 53 HE22 GLN C 17 5555 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 60 CB CYS A 60 SG 0.195 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 43 CG - CD - NE ANGL. DEV. = -13.7 DEGREES REMARK 500 MET B 68 CG - SD - CE ANGL. DEV. = 16.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 51 70.70 -119.11 REMARK 500 SER A 81 64.96 -153.18 REMARK 500 ALA C 41 81.71 -65.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 57 SG REMARK 620 2 CYS A 60 SG 110.4 REMARK 620 3 HIS A 77 NE2 100.1 110.4 REMARK 620 4 CYS A 84 SG 115.3 106.2 114.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6YIE RELATED DB: PDB DBREF 6YIF A 1 142 UNP O15392 BIRC5_HUMAN 1 142 DBREF 6YIF B 10 76 UNP Q53HL2 BOREA_HUMAN 10 76 DBREF 6YIF C 7 57 UNP Q9NQS7 INCE_HUMAN 7 57 DBREF 6YIF D 1 12 PDB 6YIF 6YIF 1 12 SEQADV 6YIF GLY A -1 UNP O15392 EXPRESSION TAG SEQADV 6YIF PRO A 0 UNP O15392 EXPRESSION TAG SEQRES 1 A 144 GLY PRO MET GLY ALA PRO THR LEU PRO PRO ALA TRP GLN SEQRES 2 A 144 PRO PHE LEU LYS ASP HIS ARG ILE SER THR PHE LYS ASN SEQRES 3 A 144 TRP PRO PHE LEU GLU GLY CYS ALA CYS THR PRO GLU ARG SEQRES 4 A 144 MET ALA GLU ALA GLY PHE ILE HIS CYS PRO THR GLU ASN SEQRES 5 A 144 GLU PRO ASP LEU ALA GLN CYS PHE PHE CYS PHE LYS GLU SEQRES 6 A 144 LEU GLU GLY TRP GLU PRO ASP ASP ASP PRO ILE GLU GLU SEQRES 7 A 144 HIS LYS LYS HIS SER SER GLY CYS ALA PHE LEU SER VAL SEQRES 8 A 144 LYS LYS GLN PHE GLU GLU LEU THR LEU GLY GLU PHE LEU SEQRES 9 A 144 LYS LEU ASP ARG GLU ARG ALA LYS ASN LYS ILE ALA LYS SEQRES 10 A 144 GLU THR ASN ASN LYS LYS LYS GLU PHE GLU GLU THR ALA SEQRES 11 A 144 LYS LYS VAL ARG ARG ALA ILE GLU GLN LEU ALA ALA MET SEQRES 12 A 144 ASP SEQRES 1 B 67 VAL ALA LYS THR ASN SER LEU ARG ARG ARG LYS LEU ALA SEQRES 2 B 67 SER PHE LEU LYS ASP PHE ASP ARG GLU VAL GLU ILE ARG SEQRES 3 B 67 ILE LYS GLN ILE GLU SER ASP ARG GLN ASN LEU LEU LYS SEQRES 4 B 67 GLU VAL ASP ASN LEU TYR ASN ILE GLU ILE LEU ARG LEU SEQRES 5 B 67 PRO LYS ALA LEU ARG GLU MET ASN TRP LEU ASP TYR PHE SEQRES 6 B 67 ALA LEU SEQRES 1 C 51 GLY PRO ILE HIS LEU LEU GLU LEU CYS ASP GLN LYS LEU SEQRES 2 C 51 MET GLU PHE LEU CYS ASN MET ASP ASN LYS ASP LEU VAL SEQRES 3 C 51 TRP LEU GLU GLU ILE GLN GLU GLU ALA GLU ARG MET PHE SEQRES 4 C 51 THR ARG GLU PHE SER LYS GLU PRO GLU LEU MET PRO SEQRES 1 D 12 ALA ARG TPO LYS GLN THR ALA ARG LYS SER THR GLY HET TPO D 3 17 HET ZN A 201 1 HET SO4 A 202 5 HET SO4 B 101 5 HET SO4 B 102 5 HETNAM TPO PHOSPHOTHREONINE HETNAM ZN ZINC ION HETNAM SO4 SULFATE ION HETSYN TPO PHOSPHONOTHREONINE FORMUL 4 TPO C4 H10 N O6 P FORMUL 5 ZN ZN 2+ FORMUL 6 SO4 3(O4 S 2-) FORMUL 9 HOH *228(H2 O) HELIX 1 AA1 TRP A 10 PHE A 13 5 4 HELIX 2 AA2 LEU A 14 THR A 21 1 8 HELIX 3 AA3 THR A 34 ALA A 41 1 8 HELIX 4 AA4 ASP A 72 SER A 81 1 10 HELIX 5 AA5 CYS A 84 VAL A 89 5 6 HELIX 6 AA6 GLN A 92 LEU A 96 5 5 HELIX 7 AA7 THR A 97 ALA A 134 1 38 HELIX 8 AA8 ALA B 22 LEU B 61 1 40 HELIX 9 AA9 PRO B 62 GLU B 67 1 6 HELIX 10 AB1 ASN B 69 ALA B 75 1 7 HELIX 11 AB2 GLY C 7 ILE C 9 5 3 HELIX 12 AB3 HIS C 10 ALA C 41 1 32 SHEET 1 AA1 4 PHE A 43 HIS A 45 0 SHEET 2 AA1 4 ALA A 55 CYS A 57 -1 O GLN A 56 N ILE A 44 SHEET 3 AA1 4 GLU A 63 GLU A 65 -1 O LEU A 64 N ALA A 55 SHEET 4 AA1 4 ARG D 2 TPO D 3 -1 O ARG D 2 N GLU A 65 LINK C ARG D 2 N TPO D 3 1555 1555 1.32 LINK C TPO D 3 N LYS D 4 1555 1555 1.33 LINK SG CYS A 57 ZN ZN A 201 1555 1555 2.25 LINK SG CYS A 60 ZN ZN A 201 1555 1555 2.24 LINK NE2 HIS A 77 ZN ZN A 201 1555 1555 2.17 LINK SG CYS A 84 ZN ZN A 201 1555 1555 2.36 SITE 1 AC1 4 CYS A 57 CYS A 60 HIS A 77 CYS A 84 SITE 1 AC2 5 GLY A 30 GLU A 107 LYS A 110 HOH A 304 SITE 2 AC2 5 HOH A 322 SITE 1 AC3 2 GLN B 44 ASN B 45 SITE 1 AC4 4 PRO B 62 LYS B 63 HOH B 232 HOH B 238 CRYST1 98.863 98.863 56.067 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010115 0.005840 0.000000 0.00000 SCALE2 0.000000 0.011680 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017836 0.00000