HEADER DNA BINDING PROTEIN 01-APR-20 6YIZ TITLE CRYSTAL STRUCTURE OF PQSR (MVFR) LIGAND-BINDING DOMAIN IN COMPLEX WITH TITLE 2 TRIAZOLO-PYRIDINE INVERSE AGONIST A CAVEAT 6YIZ OT2 A 401 HAS WRONG CHIRALITY AT ATOM C12 OT2 B 502 HAS CAVEAT 2 6YIZ WRONG CHIRALITY AT ATOM C12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR MVFR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN ATCC 15692 / DSM SOURCE 3 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1); SOURCE 4 ORGANISM_TAXID: 208964; SOURCE 5 STRAIN: ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 SOURCE 6 / 1C / PRS 101 / PAO1; SOURCE 7 GENE: MVFR, PA1003; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS QUORUM SENSING, LYSR-TYPE TRANSCRIPTIONAL REGULATOR, PSEUDOMONAS, 2 KEYWDS 2 QUINOLONE SIGNALING SYSTEM, LTTR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.SCHMELZ,W.BLANKENFELDT REVDAT 3 24-JAN-24 6YIZ 1 REMARK REVDAT 2 27-OCT-21 6YIZ 1 JRNL REVDAT 1 14-APR-21 6YIZ 0 JRNL AUTH C.SCHUTZ,D.K.HO,M.M.HAMED,A.S.ABDELSAMIE,T.ROHRIG,C.HERR, JRNL AUTH 2 A.M.KANY,K.ROX,S.SCHMELZ,L.SIEBENBURGER,M.WIRTH,C.BORGER, JRNL AUTH 3 S.YAHIAOUI,R.BALS,A.SCRIMA,W.BLANKENFELDT,J.C.HORSTMANN, JRNL AUTH 4 R.CHRISTMANN,X.MURGIA,M.KOCH,A.BERWANGER,B.LORETZ, JRNL AUTH 5 A.K.H.HIRSCH,R.W.HARTMANN,C.M.LEHR,M.EMPTING JRNL TITL A NEW PQSR INVERSE AGONIST POTENTIATES TOBRAMYCIN EFFICACY JRNL TITL 2 TO ERADICATE PSEUDOMONAS AERUGINOSA BIOFILMS. JRNL REF ADV SCI V. 8 04369 2021 JRNL REFN ESSN 2198-3844 JRNL PMID 34165899 JRNL DOI 10.1002/ADVS.202004369 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18RC4 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 50.6 REMARK 3 NUMBER OF REFLECTIONS : 20474 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.3200 - 4.1400 1.00 5702 295 0.1801 0.2262 REMARK 3 2 4.1400 - 3.2800 1.00 5509 304 0.1905 0.2703 REMARK 3 3 3.2800 - 2.8700 0.78 4287 217 0.2505 0.3051 REMARK 3 4 2.8700 - 2.6100 0.36 1966 115 0.2884 0.3382 REMARK 3 5 2.6100 - 2.4200 0.22 1223 54 0.3216 0.3519 REMARK 3 6 2.4200 - 2.2800 0.12 666 32 0.3511 0.3708 REMARK 3 7 2.2800 - 2.1600 0.02 96 8 0.4363 0.5326 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.272 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.209 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3519 REMARK 3 ANGLE : 1.593 4802 REMARK 3 CHIRALITY : 0.064 524 REMARK 3 PLANARITY : 0.010 610 REMARK 3 DIHEDRAL : 27.098 1263 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YIZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107659. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20478 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 93.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 2Q7V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 150 MM MGCL2 1.180 M LICL 0.1 M MES PH REMARK 280 6.2 10 MG/ML PQSR + 1.5 MM TRIAZOLO-PYRIDINE INVERSE AGONIST A + REMARK 280 0.4 MM PONCEAU 4 R, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.59500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.59500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 54.90500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.32500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 54.90500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.32500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 56.59500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 54.90500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.32500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.59500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 54.90500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.32500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 522 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 302 REMARK 465 ALA A 303 REMARK 465 PRO A 304 REMARK 465 ALA A 305 REMARK 465 TRP A 306 REMARK 465 GLN A 307 REMARK 465 PRO A 308 REMARK 465 SER A 309 REMARK 465 ILE A 310 REMARK 465 VAL A 311 REMARK 465 GLU A 312 REMARK 465 THR A 313 REMARK 465 ALA A 314 REMARK 465 GLN A 315 REMARK 465 ARG A 316 REMARK 465 ARG A 317 REMARK 465 SER A 318 REMARK 465 GLY A 319 REMARK 465 GLY B 91 REMARK 465 PRO B 92 REMARK 465 ASP B 301 REMARK 465 ASP B 302 REMARK 465 ALA B 303 REMARK 465 PRO B 304 REMARK 465 ALA B 305 REMARK 465 TRP B 306 REMARK 465 GLN B 307 REMARK 465 PRO B 308 REMARK 465 SER B 309 REMARK 465 ILE B 310 REMARK 465 VAL B 311 REMARK 465 GLU B 312 REMARK 465 THR B 313 REMARK 465 ALA B 314 REMARK 465 GLN B 315 REMARK 465 ARG B 316 REMARK 465 ARG B 317 REMARK 465 SER B 318 REMARK 465 GLY B 319 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 156 OG REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 183 CG CD1 CD2 REMARK 470 GLN A 203 CG CD OE1 NE2 REMARK 470 LYS B 214 CG CD CE NZ REMARK 470 GLN B 290 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 259 HH TYR B 165 1.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 193 O ALA B 230 6444 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 138 109.25 -50.63 REMARK 500 GLU A 142 48.71 35.57 REMARK 500 SER A 156 -92.01 -38.58 REMARK 500 ALA A 190 -5.96 -58.56 REMARK 500 ALA B 181 -179.11 -62.86 REMARK 500 SER B 201 -81.57 -83.34 REMARK 500 MET B 224 -33.43 -39.49 REMARK 500 ASN B 272 147.84 -39.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 510 O REMARK 620 2 HOH A 514 O 88.8 REMARK 620 3 HOH B 602 O 177.4 92.1 REMARK 620 4 HOH B 611 O 87.2 175.9 91.8 REMARK 620 5 HOH B 629 O 95.2 85.1 87.3 94.3 REMARK 620 6 HOH B 631 O 88.2 91.2 89.3 89.7 174.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OT2 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OT8 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OT2 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue OT8 B 503 DBREF 6YIZ A 91 319 UNP Q9I4X0 Q9I4X0_PSEAE 91 319 DBREF 6YIZ B 91 319 UNP Q9I4X0 Q9I4X0_PSEAE 91 319 SEQRES 1 A 229 GLY PRO ARG ASN LEU ARG VAL LEU LEU ASP THR ALA ILE SEQRES 2 A 229 PRO PRO SER PHE CYS ASP THR VAL SER SER VAL LEU LEU SEQRES 3 A 229 ASP ASP PHE ASN MET VAL SER LEU ILE ARG THR SER PRO SEQRES 4 A 229 ALA ASP SER LEU ALA THR ILE LYS GLN ASP ASN ALA GLU SEQRES 5 A 229 ILE ASP ILE ALA ILE THR ILE ASP GLU GLU LEU LYS ILE SEQRES 6 A 229 SER ARG PHE ASN GLN CYS VAL LEU GLY TYR THR LYS ALA SEQRES 7 A 229 PHE VAL VAL ALA HIS PRO GLN HIS PRO LEU CYS ASN ALA SEQRES 8 A 229 SER LEU HIS SER ILE ALA SER LEU ALA ASN TYR ARG GLN SEQRES 9 A 229 ILE SER LEU GLY SER ARG SER GLY GLN HIS SER ASN LEU SEQRES 10 A 229 LEU ARG PRO VAL SER ASP LYS VAL LEU PHE VAL GLU ASN SEQRES 11 A 229 PHE ASP ASP MET LEU ARG LEU VAL GLU ALA GLY VAL GLY SEQRES 12 A 229 TRP GLY ILE ALA PRO HIS TYR PHE VAL GLU GLU ARG LEU SEQRES 13 A 229 ARG ASN GLY THR LEU ALA VAL LEU SER GLU LEU TYR GLU SEQRES 14 A 229 PRO GLY GLY ILE ASP THR LYS VAL TYR CYS TYR TYR ASN SEQRES 15 A 229 THR ALA LEU GLU SER GLU ARG SER PHE LEU ARG PHE LEU SEQRES 16 A 229 GLU SER ALA ARG GLN ARG LEU ARG GLU LEU GLY ARG GLN SEQRES 17 A 229 ARG PHE ASP ASP ALA PRO ALA TRP GLN PRO SER ILE VAL SEQRES 18 A 229 GLU THR ALA GLN ARG ARG SER GLY SEQRES 1 B 229 GLY PRO ARG ASN LEU ARG VAL LEU LEU ASP THR ALA ILE SEQRES 2 B 229 PRO PRO SER PHE CYS ASP THR VAL SER SER VAL LEU LEU SEQRES 3 B 229 ASP ASP PHE ASN MET VAL SER LEU ILE ARG THR SER PRO SEQRES 4 B 229 ALA ASP SER LEU ALA THR ILE LYS GLN ASP ASN ALA GLU SEQRES 5 B 229 ILE ASP ILE ALA ILE THR ILE ASP GLU GLU LEU LYS ILE SEQRES 6 B 229 SER ARG PHE ASN GLN CYS VAL LEU GLY TYR THR LYS ALA SEQRES 7 B 229 PHE VAL VAL ALA HIS PRO GLN HIS PRO LEU CYS ASN ALA SEQRES 8 B 229 SER LEU HIS SER ILE ALA SER LEU ALA ASN TYR ARG GLN SEQRES 9 B 229 ILE SER LEU GLY SER ARG SER GLY GLN HIS SER ASN LEU SEQRES 10 B 229 LEU ARG PRO VAL SER ASP LYS VAL LEU PHE VAL GLU ASN SEQRES 11 B 229 PHE ASP ASP MET LEU ARG LEU VAL GLU ALA GLY VAL GLY SEQRES 12 B 229 TRP GLY ILE ALA PRO HIS TYR PHE VAL GLU GLU ARG LEU SEQRES 13 B 229 ARG ASN GLY THR LEU ALA VAL LEU SER GLU LEU TYR GLU SEQRES 14 B 229 PRO GLY GLY ILE ASP THR LYS VAL TYR CYS TYR TYR ASN SEQRES 15 B 229 THR ALA LEU GLU SER GLU ARG SER PHE LEU ARG PHE LEU SEQRES 16 B 229 GLU SER ALA ARG GLN ARG LEU ARG GLU LEU GLY ARG GLN SEQRES 17 B 229 ARG PHE ASP ASP ALA PRO ALA TRP GLN PRO SER ILE VAL SEQRES 18 B 229 GLU THR ALA GLN ARG ARG SER GLY HET OT2 A 401 46 HET OT8 A 402 46 HET MG B 501 1 HET OT2 B 502 46 HET OT8 B 503 46 HETNAM OT2 7-OXIDANYLIDENE-8-[2-(4-SULFONAPHTHALEN-1-YL) HETNAM 2 OT2 HYDRAZINYL]-8~{H}-NAPHTHALENE-1,3-DISULFONIC ACID HETNAM OT8 ~{N}-[[1-(4-PHENOXYPHENYL)-1,2,3-TRIAZOL-4-YL]METHYL]- HETNAM 2 OT8 2-(TRIFLUOROMETHYL)PYRIDIN-4-AMINE HETNAM MG MAGNESIUM ION FORMUL 3 OT2 2(C20 H16 N2 O10 S3) FORMUL 4 OT8 2(C21 H16 F3 N5 O) FORMUL 5 MG MG 2+ FORMUL 8 HOH *70(H2 O) HELIX 1 AA1 GLY A 91 ASN A 94 5 4 HELIX 2 AA2 PRO A 104 PHE A 119 1 16 HELIX 3 AA3 SER A 128 ALA A 130 5 3 HELIX 4 AA4 ASP A 131 GLN A 138 1 8 HELIX 5 AA5 ASP A 139 GLU A 142 5 4 HELIX 6 AA6 HIS A 176 ALA A 181 1 6 HELIX 7 AA7 SER A 185 ASN A 191 1 7 HELIX 8 AA8 ASN A 220 GLY A 231 1 12 HELIX 9 AA9 HIS A 239 ASN A 248 1 10 HELIX 10 AB1 THR A 273 GLU A 278 1 6 HELIX 11 AB2 GLU A 278 GLN A 298 1 21 HELIX 12 AB3 ARG A 299 ASP A 301 5 3 HELIX 13 AB4 PRO B 104 LEU B 116 1 13 HELIX 14 AB5 ASP B 131 GLN B 138 1 8 HELIX 15 AB6 ASP B 139 GLU B 142 5 4 HELIX 16 AB7 HIS B 176 ALA B 181 1 6 HELIX 17 AB8 SER B 185 ALA B 190 1 6 HELIX 18 AB9 ASN B 220 GLY B 231 1 12 HELIX 19 AC1 VAL B 242 GLY B 249 1 8 HELIX 20 AC2 ALA B 274 GLU B 276 5 3 HELIX 21 AC3 GLU B 278 GLN B 298 1 21 SHEET 1 AA1 8 VAL A 122 THR A 127 0 SHEET 2 AA1 8 LEU A 95 ASP A 100 1 N LEU A 99 O ILE A 125 SHEET 3 AA1 8 ILE A 145 THR A 148 1 O ILE A 147 N LEU A 98 SHEET 4 AA1 8 ILE A 263 ASN A 272 -1 O TYR A 270 N ALA A 146 SHEET 5 AA1 8 PHE A 158 ALA A 172 -1 N THR A 166 O THR A 265 SHEET 6 AA1 8 TRP A 234 PRO A 238 -1 O ALA A 237 N PHE A 169 SHEET 7 AA1 8 GLN A 194 LEU A 197 1 N ILE A 195 O TRP A 234 SHEET 8 AA1 8 VAL A 215 VAL A 218 1 O LEU A 216 N SER A 196 SHEET 1 AA2 6 VAL A 122 THR A 127 0 SHEET 2 AA2 6 LEU A 95 ASP A 100 1 N LEU A 99 O ILE A 125 SHEET 3 AA2 6 ILE A 145 THR A 148 1 O ILE A 147 N LEU A 98 SHEET 4 AA2 6 ILE A 263 ASN A 272 -1 O TYR A 270 N ALA A 146 SHEET 5 AA2 6 PHE A 158 ALA A 172 -1 N THR A 166 O THR A 265 SHEET 6 AA2 6 ALA A 252 VAL A 253 -1 O ALA A 252 N ALA A 172 SHEET 1 AA3 6 VAL B 122 THR B 127 0 SHEET 2 AA3 6 LEU B 95 ASP B 100 1 N LEU B 99 O ILE B 125 SHEET 3 AA3 6 ILE B 145 THR B 148 1 O ILE B 147 N LEU B 98 SHEET 4 AA3 6 ILE B 263 ASN B 272 -1 O TYR B 270 N ALA B 146 SHEET 5 AA3 6 VAL B 162 ALA B 172 -1 N THR B 166 O THR B 265 SHEET 6 AA3 6 TRP B 234 PRO B 238 -1 O GLY B 235 N VAL B 171 SHEET 1 AA4 4 PHE B 158 ASN B 159 0 SHEET 2 AA4 4 ILE B 263 ASN B 272 -1 O TYR B 271 N ASN B 159 SHEET 3 AA4 4 VAL B 162 ALA B 172 -1 N THR B 166 O THR B 265 SHEET 4 AA4 4 ALA B 252 VAL B 253 -1 O ALA B 252 N ALA B 172 SHEET 1 AA5 2 GLN B 194 LEU B 197 0 SHEET 2 AA5 2 VAL B 215 VAL B 218 1 O LEU B 216 N GLN B 194 LINK O HOH A 510 MG MG B 501 1555 1555 2.18 LINK O HOH A 514 MG MG B 501 1555 1555 2.13 LINK MG MG B 501 O HOH B 602 1555 1555 2.17 LINK MG MG B 501 O HOH B 611 1555 1555 2.14 LINK MG MG B 501 O HOH B 629 1555 1555 2.16 LINK MG MG B 501 O HOH B 631 1555 1555 2.16 SITE 1 AC1 15 SER A 106 PHE A 107 GLY A 164 TYR A 165 SITE 2 AC1 15 THR A 166 LYS A 167 HIS A 239 LEU A 292 SITE 3 AC1 15 ARG A 293 GLY A 296 ARG A 297 ARG A 299 SITE 4 AC1 15 HOH A 514 ARG B 297 HOH B 602 SITE 1 AC2 11 ILE A 149 ALA A 168 ILE A 186 LEU A 189 SITE 2 AC2 11 PHE A 221 ILE A 236 ALA A 237 PRO A 238 SITE 3 AC2 11 TYR A 258 ILE A 263 THR A 265 SITE 1 AC3 6 HOH A 510 HOH A 514 HOH B 602 HOH B 611 SITE 2 AC3 6 HOH B 629 HOH B 631 SITE 1 AC4 16 ARG A 297 PHE A 300 PRO B 104 SER B 106 SITE 2 AC4 16 PHE B 107 GLY B 164 TYR B 165 THR B 166 SITE 3 AC4 16 LYS B 167 LEU B 292 ARG B 293 GLY B 296 SITE 4 AC4 16 ARG B 297 ARG B 299 HOH B 602 HOH B 611 SITE 1 AC5 13 ILE B 149 ALA B 168 LEU B 183 ILE B 186 SITE 2 AC5 13 LEU B 189 LEU B 207 PHE B 221 ILE B 236 SITE 3 AC5 13 ALA B 237 PRO B 238 TYR B 258 ILE B 263 SITE 4 AC5 13 HOH B 609 CRYST1 109.810 120.650 113.190 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009107 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008288 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008835 0.00000