HEADER VIRAL PROTEIN 03-APR-20 6YJL TITLE SOLUTION NMR STRUCTURE OF THE C-TERMINAL ARM OF RSV NUCLEOPROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN N,NUCLEOCAPSID PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: RESIDUES 361-391 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN SOURCE 3 A2); SOURCE 4 ORGANISM_TAXID: 11259; SOURCE 5 STRAIN: A2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX-4T3 KEYWDS STRUCTURE FROM CYANA NUCLEAR MAGNETIC RESONANCE RESPIRATORY SYNCYTIAL KEYWDS 2 VIRUS NUCLEOPROTEIN NUCLEOCAPSID RNA DEPENDENT RNA POLYMERASE KEYWDS 3 PEPTIDE INTRINSICALLY DISORDERED REGION, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.CARDONE,J.-F.ELEOUET,M.GALLOUX,C.SIZUN REVDAT 2 14-JUN-23 6YJL 1 REMARK REVDAT 1 14-APR-21 6YJL 0 JRNL AUTH C.CARDONE,J.-F.ELEOUET,M.GALLOUX,C.SIZUN JRNL TITL SOLUTION NMR STRUCTURE OF THE C-TERMINAL ARM OF RSV JRNL TITL 2 NUCLEOPROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.98 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YJL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107742. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 133 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 20 MM UNLABELED SODIUM REMARK 210 PHOSPHATE, 100 MM UNLABELED REMARK 210 SODIUM CHLORIDE, 1 MM UNLABELED REMARK 210 TCEP, 1 MM [U-13C; U-15N] RSV_N_ REMARK 210 CARM, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCO; 3D REMARK 210 HNCA; 3D HN(CO)CA; 3D HN(COCA)CB; REMARK 210 3D HNCACB; 3D HBHA(CO)NH; 3D REMARK 210 HBHANH; 3D H(CCO)NH; 2D 1H-13C REMARK 210 HSQC; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 4.0, CCPNMR ANALYSIS REMARK 210 2.4, TALOS 4.21 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 383 68.74 60.73 REMARK 500 1 VAL A 389 82.46 51.89 REMARK 500 2 ILE A 363 75.85 62.79 REMARK 500 2 TYR A 365 40.97 -97.02 REMARK 500 2 VAL A 367 131.86 -170.38 REMARK 500 2 ASN A 383 71.86 53.41 REMARK 500 3 SER A 366 69.77 -113.24 REMARK 500 3 LEU A 368 61.07 -106.22 REMARK 500 3 ASN A 383 71.28 -154.92 REMARK 500 4 SER A 360 -61.84 -128.77 REMARK 500 4 ASP A 369 70.79 -105.37 REMARK 500 4 ASN A 383 70.20 -174.13 REMARK 500 4 PRO A 384 80.32 -69.84 REMARK 500 5 ILE A 363 42.86 -104.96 REMARK 500 5 ASP A 369 62.88 -112.20 REMARK 500 6 ASN A 383 68.97 -118.43 REMARK 500 6 PRO A 384 -174.67 -69.80 REMARK 500 6 VAL A 389 41.66 -105.62 REMARK 500 7 ASN A 364 58.63 -102.24 REMARK 500 7 ASP A 369 70.94 -118.62 REMARK 500 7 ASN A 383 72.59 53.92 REMARK 500 7 VAL A 389 40.83 -100.38 REMARK 500 8 LEU A 368 72.48 -114.56 REMARK 500 8 ASN A 383 71.43 56.95 REMARK 500 8 LYS A 385 42.42 -104.23 REMARK 500 8 GLU A 390 -60.44 -93.62 REMARK 500 9 ILE A 363 77.63 60.11 REMARK 500 9 PRO A 384 96.10 -69.78 REMARK 500 10 ASN A 364 49.84 -106.16 REMARK 500 10 VAL A 367 77.58 -117.35 REMARK 500 10 ASN A 383 69.03 -155.91 REMARK 500 10 PRO A 384 79.44 -69.80 REMARK 500 11 GLN A 381 139.66 -173.56 REMARK 500 11 ASN A 383 71.12 61.20 REMARK 500 11 LYS A 385 -43.95 -130.55 REMARK 500 12 VAL A 367 45.26 -101.59 REMARK 500 12 ASP A 369 48.57 -97.74 REMARK 500 12 ASP A 388 71.33 -114.24 REMARK 500 12 GLU A 390 -47.14 -132.89 REMARK 500 13 VAL A 362 145.17 -173.44 REMARK 500 13 ASN A 364 -179.93 -170.07 REMARK 500 13 SER A 366 117.55 -161.21 REMARK 500 13 LEU A 368 52.38 -103.29 REMARK 500 14 ASP A 386 43.93 -108.21 REMARK 500 15 ASP A 386 72.18 -102.00 REMARK 500 16 ILE A 363 -70.28 -105.16 REMARK 500 16 PRO A 384 88.86 -69.72 REMARK 500 17 VAL A 367 77.95 -118.74 REMARK 500 17 LYS A 385 97.08 -62.95 REMARK 500 18 VAL A 367 44.15 -106.02 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34512 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF THE C-TERMINAL ARM OF RSV NUCLEOPROTEIN DBREF 6YJL A 361 391 UNP P03418 NCAP_HRSVA 361 391 SEQADV 6YJL GLY A 359 UNP P03418 EXPRESSION TAG SEQADV 6YJL SER A 360 UNP P03418 EXPRESSION TAG SEQRES 1 A 33 GLY SER GLY VAL ILE ASN TYR SER VAL LEU ASP LEU THR SEQRES 2 A 33 ALA GLU GLU LEU GLU ALA ILE LYS HIS GLN LEU ASN PRO SEQRES 3 A 33 LYS ASP ASN ASP VAL GLU LEU HELIX 1 AA1 THR A 371 GLN A 381 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1