data_6YL4 # _entry.id 6YL4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6YL4 WWPDB D_1292103164 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YL4 _pdbx_database_status.recvd_initial_deposition_date 2020-04-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kramer, J.S.' 1 0000-0002-1525-5896 'Pogoryelov, D.' 2 0000-0002-1961-6214 'Hiesinger, K.' 3 0000-0001-5458-816X 'Proschak, E.' 4 0000-0003-1961-1859 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 63 _citation.language ? _citation.page_first 11498 _citation.page_last 11521 _citation.title 'Design, Synthesis, and Structure-Activity Relationship Studies of Dual Inhibitors of Soluble Epoxide Hydrolase and 5-Lipoxygenase.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.0c00561 _citation.pdbx_database_id_PubMed 33044073 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hiesinger, K.' 1 ? primary 'Kramer, J.S.' 2 ? primary 'Beyer, S.' 3 ? primary 'Eckes, T.' 4 ? primary 'Brunst, S.' 5 ? primary 'Flauaus, C.' 6 ? primary 'Wittmann, S.K.' 7 ? primary 'Weizel, L.' 8 ? primary 'Kaiser, A.' 9 ? primary 'Kretschmer, S.B.M.' 10 ? primary 'George, S.' 11 ? primary 'Angioni, C.' 12 ? primary 'Heering, J.' 13 ? primary 'Geisslinger, G.' 14 ? primary 'Schubert-Zsilavecz, M.' 15 ? primary 'Schmidtko, A.' 16 ? primary 'Pogoryelov, D.' 17 ? primary 'Pfeilschifter, J.' 18 ? primary 'Hofmann, B.' 19 ? primary 'Steinhilber, D.' 20 ? primary 'Schwalm, S.' 21 ? primary 'Proschak, E.' 22 0000-0003-1961-1859 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6YL4 _cell.details ? _cell.formula_units_Z ? _cell.length_a 79.934 _cell.length_a_esd ? _cell.length_b 92.238 _cell.length_b_esd ? _cell.length_c 106.646 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bifunctional epoxide hydrolase 2' 39648.531 1 3.3.2.10,3.1.3.76 ? ? ? 2 non-polymer syn '3-[(3~{R})-3-[aminocarbonyl(oxidanyl)amino]but-1-ynyl]-~{N}-[(3~{S})-3-phenyl-3-[4-(trifluoromethyloxy)phenyl]propyl]benzamide' 525.519 1 ? ? ? ? 3 water nat water 18.015 93 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGE SSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKAN PVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSG FRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQIL IKWLDSDARNPPVVSKMLLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MASLNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGE SSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKAN PVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSG FRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQIL IKWLDSDARNPPVVSKMLLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 LEU n 1 5 ASN n 1 6 THR n 1 7 PRO n 1 8 ALA n 1 9 PRO n 1 10 LEU n 1 11 PRO n 1 12 THR n 1 13 SER n 1 14 CYS n 1 15 ASN n 1 16 PRO n 1 17 SER n 1 18 ASP n 1 19 MET n 1 20 SER n 1 21 HIS n 1 22 GLY n 1 23 TYR n 1 24 VAL n 1 25 THR n 1 26 VAL n 1 27 LYS n 1 28 PRO n 1 29 ARG n 1 30 VAL n 1 31 ARG n 1 32 LEU n 1 33 HIS n 1 34 PHE n 1 35 VAL n 1 36 GLU n 1 37 LEU n 1 38 GLY n 1 39 SER n 1 40 GLY n 1 41 PRO n 1 42 ALA n 1 43 VAL n 1 44 CYS n 1 45 LEU n 1 46 CYS n 1 47 HIS n 1 48 GLY n 1 49 PHE n 1 50 PRO n 1 51 GLU n 1 52 SER n 1 53 TRP n 1 54 TYR n 1 55 SER n 1 56 TRP n 1 57 ARG n 1 58 TYR n 1 59 GLN n 1 60 ILE n 1 61 PRO n 1 62 ALA n 1 63 LEU n 1 64 ALA n 1 65 GLN n 1 66 ALA n 1 67 GLY n 1 68 TYR n 1 69 ARG n 1 70 VAL n 1 71 LEU n 1 72 ALA n 1 73 MET n 1 74 ASP n 1 75 MET n 1 76 LYS n 1 77 GLY n 1 78 TYR n 1 79 GLY n 1 80 GLU n 1 81 SER n 1 82 SER n 1 83 ALA n 1 84 PRO n 1 85 PRO n 1 86 GLU n 1 87 ILE n 1 88 GLU n 1 89 GLU n 1 90 TYR n 1 91 CYS n 1 92 MET n 1 93 GLU n 1 94 VAL n 1 95 LEU n 1 96 CYS n 1 97 LYS n 1 98 GLU n 1 99 MET n 1 100 VAL n 1 101 THR n 1 102 PHE n 1 103 LEU n 1 104 ASP n 1 105 LYS n 1 106 LEU n 1 107 GLY n 1 108 LEU n 1 109 SER n 1 110 GLN n 1 111 ALA n 1 112 VAL n 1 113 PHE n 1 114 ILE n 1 115 GLY n 1 116 HIS n 1 117 ASP n 1 118 TRP n 1 119 GLY n 1 120 GLY n 1 121 MET n 1 122 LEU n 1 123 VAL n 1 124 TRP n 1 125 TYR n 1 126 MET n 1 127 ALA n 1 128 LEU n 1 129 PHE n 1 130 TYR n 1 131 PRO n 1 132 GLU n 1 133 ARG n 1 134 VAL n 1 135 ARG n 1 136 ALA n 1 137 VAL n 1 138 ALA n 1 139 SER n 1 140 LEU n 1 141 ASN n 1 142 THR n 1 143 PRO n 1 144 PHE n 1 145 ILE n 1 146 PRO n 1 147 ALA n 1 148 ASN n 1 149 PRO n 1 150 ASN n 1 151 MET n 1 152 SER n 1 153 PRO n 1 154 LEU n 1 155 GLU n 1 156 SER n 1 157 ILE n 1 158 LYS n 1 159 ALA n 1 160 ASN n 1 161 PRO n 1 162 VAL n 1 163 PHE n 1 164 ASP n 1 165 TYR n 1 166 GLN n 1 167 LEU n 1 168 TYR n 1 169 PHE n 1 170 GLN n 1 171 GLU n 1 172 PRO n 1 173 GLY n 1 174 VAL n 1 175 ALA n 1 176 GLU n 1 177 ALA n 1 178 GLU n 1 179 LEU n 1 180 GLU n 1 181 GLN n 1 182 ASN n 1 183 LEU n 1 184 SER n 1 185 ARG n 1 186 THR n 1 187 PHE n 1 188 LYS n 1 189 SER n 1 190 LEU n 1 191 PHE n 1 192 ARG n 1 193 ALA n 1 194 SER n 1 195 ASP n 1 196 GLU n 1 197 SER n 1 198 VAL n 1 199 LEU n 1 200 SER n 1 201 MET n 1 202 HIS n 1 203 LYS n 1 204 VAL n 1 205 CYS n 1 206 GLU n 1 207 ALA n 1 208 GLY n 1 209 GLY n 1 210 LEU n 1 211 PHE n 1 212 VAL n 1 213 ASN n 1 214 SER n 1 215 PRO n 1 216 GLU n 1 217 GLU n 1 218 PRO n 1 219 SER n 1 220 LEU n 1 221 SER n 1 222 ARG n 1 223 MET n 1 224 VAL n 1 225 THR n 1 226 GLU n 1 227 GLU n 1 228 GLU n 1 229 ILE n 1 230 GLN n 1 231 PHE n 1 232 TYR n 1 233 VAL n 1 234 GLN n 1 235 GLN n 1 236 PHE n 1 237 LYS n 1 238 LYS n 1 239 SER n 1 240 GLY n 1 241 PHE n 1 242 ARG n 1 243 GLY n 1 244 PRO n 1 245 LEU n 1 246 ASN n 1 247 TRP n 1 248 TYR n 1 249 ARG n 1 250 ASN n 1 251 MET n 1 252 GLU n 1 253 ARG n 1 254 ASN n 1 255 TRP n 1 256 LYS n 1 257 TRP n 1 258 ALA n 1 259 CYS n 1 260 LYS n 1 261 SER n 1 262 LEU n 1 263 GLY n 1 264 ARG n 1 265 LYS n 1 266 ILE n 1 267 LEU n 1 268 ILE n 1 269 PRO n 1 270 ALA n 1 271 LEU n 1 272 MET n 1 273 VAL n 1 274 THR n 1 275 ALA n 1 276 GLU n 1 277 LYS n 1 278 ASP n 1 279 PHE n 1 280 VAL n 1 281 LEU n 1 282 VAL n 1 283 PRO n 1 284 GLN n 1 285 MET n 1 286 SER n 1 287 GLN n 1 288 HIS n 1 289 MET n 1 290 GLU n 1 291 ASP n 1 292 TRP n 1 293 ILE n 1 294 PRO n 1 295 HIS n 1 296 LEU n 1 297 LYS n 1 298 ARG n 1 299 GLY n 1 300 HIS n 1 301 ILE n 1 302 GLU n 1 303 ASP n 1 304 CYS n 1 305 GLY n 1 306 HIS n 1 307 TRP n 1 308 THR n 1 309 GLN n 1 310 MET n 1 311 ASP n 1 312 LYS n 1 313 PRO n 1 314 THR n 1 315 GLU n 1 316 VAL n 1 317 ASN n 1 318 GLN n 1 319 ILE n 1 320 LEU n 1 321 ILE n 1 322 LYS n 1 323 TRP n 1 324 LEU n 1 325 ASP n 1 326 SER n 1 327 ASP n 1 328 ALA n 1 329 ARG n 1 330 ASN n 1 331 PRO n 1 332 PRO n 1 333 VAL n 1 334 VAL n 1 335 SER n 1 336 LYS n 1 337 MET n 1 338 LEU n 1 339 LEU n 1 340 GLU n 1 341 HIS n 1 342 HIS n 1 343 HIS n 1 344 HIS n 1 345 HIS n 1 346 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 346 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene EPHX2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HYES_HUMAN _struct_ref.pdbx_db_accession P34913 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LNTPAPLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSA PPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVF DYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRG PLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKW LDSDARNPPVVSKM ; _struct_ref.pdbx_align_begin 222 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YL4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 337 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P34913 _struct_ref_seq.db_align_beg 222 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 555 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 222 _struct_ref_seq.pdbx_auth_seq_align_end 555 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6YL4 MET A 1 ? UNP P34913 ? ? 'initiating methionine' 219 1 1 6YL4 ALA A 2 ? UNP P34913 ? ? 'expression tag' 220 2 1 6YL4 SER A 3 ? UNP P34913 ? ? 'expression tag' 221 3 1 6YL4 LEU A 338 ? UNP P34913 ? ? 'expression tag' 556 4 1 6YL4 LEU A 339 ? UNP P34913 ? ? 'expression tag' 557 5 1 6YL4 GLU A 340 ? UNP P34913 ? ? 'expression tag' 558 6 1 6YL4 HIS A 341 ? UNP P34913 ? ? 'expression tag' 559 7 1 6YL4 HIS A 342 ? UNP P34913 ? ? 'expression tag' 560 8 1 6YL4 HIS A 343 ? UNP P34913 ? ? 'expression tag' 561 9 1 6YL4 HIS A 344 ? UNP P34913 ? ? 'expression tag' 562 10 1 6YL4 HIS A 345 ? UNP P34913 ? ? 'expression tag' 563 11 1 6YL4 HIS A 346 ? UNP P34913 ? ? 'expression tag' 564 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 OWW non-polymer . '3-[(3~{R})-3-[aminocarbonyl(oxidanyl)amino]but-1-ynyl]-~{N}-[(3~{S})-3-phenyl-3-[4-(trifluoromethyloxy)phenyl]propyl]benzamide' ? 'C28 H26 F3 N3 O4' 525.519 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YL4 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.48 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;1 uL protein solution (5-10 mg/mL, 50 mM NaCl, 50 mM sodium phosphate, 10% (v/v) glycerol (98%), 2 mM DTT at pH 7.4) was mixed at differnt ratios (2/1, 1/1, 1/2) with precipitant solution (23%-28% (w/v) polyethenglycol (PEG) 6000, 70 mM ammonium acetat, 200 mM magnesium acetat, 100 mM sodium cacodylate at pH 6.1-6.5) ; _exptl_crystal_grow.pdbx_pH_range 6.0-6.55 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-09-16 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Mirrors _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.072 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.072 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 38.910 _reflns.entry_id 6YL4 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.001 _reflns.d_resolution_low 46.119 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26716 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.85 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.69 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.001 _reflns_shell.d_res_low 2.073 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.57 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2418 _reflns_shell.percent_possible_all 89.62 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.721 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 132.790 _refine.B_iso_mean 53.6076 _refine.B_iso_min 24.350 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YL4 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0010 _refine.ls_d_res_low 46.1190 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 26663 _refine.ls_number_reflns_R_free 1173 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.8700 _refine.ls_percent_reflns_R_free 4.4000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1850 _refine.ls_R_factor_R_free 0.2073 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1839 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.3600 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2400 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0010 _refine_hist.d_res_low 46.1190 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 2700 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 319 _refine_hist.pdbx_B_iso_mean_ligand 81.19 _refine_hist.pdbx_B_iso_mean_solvent 50.61 _refine_hist.pdbx_number_atoms_protein 2569 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 2732 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.906 ? 3713 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.053 ? 379 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 480 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 31.257 ? 1006 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0012 2.0923 . . 135 2916 92.0000 . . . 0.3083 0.0000 0.2615 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0923 2.2026 . . 145 3166 100.0000 . . . 0.2800 0.0000 0.2349 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2026 2.3406 . . 146 3180 100.0000 . . . 0.2656 0.0000 0.2080 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3406 2.5213 . . 147 3199 100.0000 . . . 0.2275 0.0000 0.2051 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5213 2.7750 . . 148 3202 100.0000 . . . 0.2274 0.0000 0.1923 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7750 3.1765 . . 148 3211 100.0000 . . . 0.2241 0.0000 0.1902 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.1765 4.0017 . . 150 3254 100.0000 . . . 0.2006 0.0000 0.1703 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0017 46.1190 . . 154 3362 100.0000 . . . 0.1726 0.0000 0.1678 . . . . . . . . . . . # _struct.entry_id 6YL4 _struct.title ;Soluble epoxide hydrolase in complex with 3-((R)-3-(1-hydroxyureido)but-1-yn-1-yl)-N-((S)-3-phenyl-3-(4-trifluoromethoxy)phenyl)propyl)benzamide ; _struct.pdbx_descriptor 'Beta-lactamase VIM-2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YL4 _struct_keywords.text 'Inhibitor, Complex, sEH, Hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 15 ? MET A 19 ? ASN A 233 MET A 237 5 ? 5 HELX_P HELX_P2 AA2 SER A 52 ? ARG A 57 ? SER A 270 ARG A 275 5 ? 6 HELX_P HELX_P3 AA3 TYR A 58 ? ALA A 66 ? TYR A 276 ALA A 284 1 ? 9 HELX_P HELX_P4 AA4 GLU A 86 ? TYR A 90 ? GLU A 304 TYR A 308 5 ? 5 HELX_P HELX_P5 AA5 CYS A 91 ? GLY A 107 ? CYS A 309 GLY A 325 1 ? 17 HELX_P HELX_P6 AA6 ASP A 117 ? TYR A 130 ? ASP A 335 TYR A 348 1 ? 14 HELX_P HELX_P7 AA7 SER A 152 ? ALA A 159 ? SER A 370 ALA A 377 1 ? 8 HELX_P HELX_P8 AA8 ASN A 160 ? PHE A 163 ? ASN A 378 PHE A 381 5 ? 4 HELX_P HELX_P9 AA9 ASP A 164 ? PHE A 169 ? ASP A 382 PHE A 387 1 ? 6 HELX_P HELX_P10 AB1 GLY A 173 ? ASN A 182 ? GLY A 391 ASN A 400 1 ? 10 HELX_P HELX_P11 AB2 ASN A 182 ? PHE A 191 ? ASN A 400 PHE A 409 1 ? 10 HELX_P HELX_P12 AB3 ALA A 193 ? SER A 197 ? ALA A 411 SER A 415 5 ? 5 HELX_P HELX_P13 AB4 THR A 225 ? GLY A 240 ? THR A 443 GLY A 458 1 ? 16 HELX_P HELX_P14 AB5 PHE A 241 ? TRP A 247 ? PHE A 459 TRP A 465 1 ? 7 HELX_P HELX_P15 AB6 ASN A 250 ? LYS A 260 ? ASN A 468 LYS A 478 1 ? 11 HELX_P HELX_P16 AB7 VAL A 282 ? GLN A 287 ? VAL A 500 GLN A 505 5 ? 6 HELX_P HELX_P17 AB8 HIS A 288 ? TRP A 292 ? HIS A 506 TRP A 510 5 ? 5 HELX_P HELX_P18 AB9 TRP A 307 ? LYS A 312 ? TRP A 525 LYS A 530 1 ? 6 HELX_P HELX_P19 AC1 LYS A 312 ? ALA A 328 ? LYS A 530 ALA A 546 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 49 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 267 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 50 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 268 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -9.88 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 20 ? LYS A 27 ? SER A 238 LYS A 245 AA1 2 VAL A 30 ? LEU A 37 ? VAL A 248 LEU A 255 AA1 3 ARG A 69 ? MET A 73 ? ARG A 287 MET A 291 AA1 4 ALA A 42 ? CYS A 46 ? ALA A 260 CYS A 264 AA1 5 ALA A 111 ? HIS A 116 ? ALA A 329 HIS A 334 AA1 6 VAL A 134 ? LEU A 140 ? VAL A 352 LEU A 358 AA1 7 ALA A 270 ? ALA A 275 ? ALA A 488 ALA A 493 AA1 8 LEU A 296 ? ILE A 301 ? LEU A 514 ILE A 519 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 24 ? N VAL A 242 O LEU A 32 ? O LEU A 250 AA1 2 3 N LEU A 37 ? N LEU A 255 O VAL A 70 ? O VAL A 288 AA1 3 4 O LEU A 71 ? O LEU A 289 N VAL A 43 ? N VAL A 261 AA1 4 5 N CYS A 44 ? N CYS A 262 O VAL A 112 ? O VAL A 330 AA1 5 6 N GLY A 115 ? N GLY A 333 O LEU A 140 ? O LEU A 358 AA1 6 7 N SER A 139 ? N SER A 357 O VAL A 273 ? O VAL A 491 AA1 7 8 N ALA A 270 ? N ALA A 488 O LYS A 297 ? O LYS A 515 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id OWW _struct_site.pdbx_auth_seq_id 601 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 17 _struct_site.details 'binding site for residue OWW A 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ASP A 117 ? ASP A 335 . ? 1_555 ? 2 AC1 17 TRP A 118 ? TRP A 336 . ? 1_555 ? 3 AC1 17 MET A 121 ? MET A 339 . ? 1_555 ? 4 AC1 17 ILE A 157 ? ILE A 375 . ? 1_555 ? 5 AC1 17 TYR A 165 ? TYR A 383 . ? 1_555 ? 6 AC1 17 GLN A 166 ? GLN A 384 . ? 1_555 ? 7 AC1 17 PHE A 169 ? PHE A 387 . ? 1_555 ? 8 AC1 17 LEU A 190 ? LEU A 408 . ? 1_555 ? 9 AC1 17 MET A 201 ? MET A 419 . ? 1_555 ? 10 AC1 17 LEU A 210 ? LEU A 428 . ? 1_555 ? 11 AC1 17 TYR A 248 ? TYR A 466 . ? 1_555 ? 12 AC1 17 MET A 251 ? MET A 469 . ? 1_555 ? 13 AC1 17 ASP A 278 ? ASP A 496 . ? 1_555 ? 14 AC1 17 PHE A 279 ? PHE A 497 . ? 1_555 ? 15 AC1 17 VAL A 280 ? VAL A 498 . ? 1_555 ? 16 AC1 17 HIS A 306 ? HIS A 524 . ? 1_555 ? 17 AC1 17 TRP A 307 ? TRP A 525 . ? 1_555 ? # _atom_sites.entry_id 6YL4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.012510 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010842 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009377 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C F N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 219 ? ? ? A . n A 1 2 ALA 2 220 ? ? ? A . n A 1 3 SER 3 221 ? ? ? A . n A 1 4 LEU 4 222 ? ? ? A . n A 1 5 ASN 5 223 ? ? ? A . n A 1 6 THR 6 224 ? ? ? A . n A 1 7 PRO 7 225 ? ? ? A . n A 1 8 ALA 8 226 ? ? ? A . n A 1 9 PRO 9 227 ? ? ? A . n A 1 10 LEU 10 228 ? ? ? A . n A 1 11 PRO 11 229 229 PRO PRO A . n A 1 12 THR 12 230 230 THR THR A . n A 1 13 SER 13 231 231 SER SER A . n A 1 14 CYS 14 232 232 CYS CYS A . n A 1 15 ASN 15 233 233 ASN ASN A . n A 1 16 PRO 16 234 234 PRO PRO A . n A 1 17 SER 17 235 235 SER SER A . n A 1 18 ASP 18 236 236 ASP ASP A . n A 1 19 MET 19 237 237 MET MET A . n A 1 20 SER 20 238 238 SER SER A . n A 1 21 HIS 21 239 239 HIS HIS A . n A 1 22 GLY 22 240 240 GLY GLY A . n A 1 23 TYR 23 241 241 TYR TYR A . n A 1 24 VAL 24 242 242 VAL VAL A . n A 1 25 THR 25 243 243 THR THR A . n A 1 26 VAL 26 244 244 VAL VAL A . n A 1 27 LYS 27 245 245 LYS LYS A . n A 1 28 PRO 28 246 246 PRO PRO A . n A 1 29 ARG 29 247 247 ARG ARG A . n A 1 30 VAL 30 248 248 VAL VAL A . n A 1 31 ARG 31 249 249 ARG ARG A . n A 1 32 LEU 32 250 250 LEU LEU A . n A 1 33 HIS 33 251 251 HIS HIS A . n A 1 34 PHE 34 252 252 PHE PHE A . n A 1 35 VAL 35 253 253 VAL VAL A . n A 1 36 GLU 36 254 254 GLU GLU A . n A 1 37 LEU 37 255 255 LEU LEU A . n A 1 38 GLY 38 256 256 GLY GLY A . n A 1 39 SER 39 257 257 SER SER A . n A 1 40 GLY 40 258 258 GLY GLY A . n A 1 41 PRO 41 259 259 PRO PRO A . n A 1 42 ALA 42 260 260 ALA ALA A . n A 1 43 VAL 43 261 261 VAL VAL A . n A 1 44 CYS 44 262 262 CYS CYS A . n A 1 45 LEU 45 263 263 LEU LEU A . n A 1 46 CYS 46 264 264 CYS CYS A . n A 1 47 HIS 47 265 265 HIS HIS A . n A 1 48 GLY 48 266 266 GLY GLY A . n A 1 49 PHE 49 267 267 PHE PHE A . n A 1 50 PRO 50 268 268 PRO PRO A . n A 1 51 GLU 51 269 269 GLU GLU A . n A 1 52 SER 52 270 270 SER SER A . n A 1 53 TRP 53 271 271 TRP TRP A . n A 1 54 TYR 54 272 272 TYR TYR A . n A 1 55 SER 55 273 273 SER SER A . n A 1 56 TRP 56 274 274 TRP TRP A . n A 1 57 ARG 57 275 275 ARG ARG A . n A 1 58 TYR 58 276 276 TYR TYR A . n A 1 59 GLN 59 277 277 GLN GLN A . n A 1 60 ILE 60 278 278 ILE ILE A . n A 1 61 PRO 61 279 279 PRO PRO A . n A 1 62 ALA 62 280 280 ALA ALA A . n A 1 63 LEU 63 281 281 LEU LEU A . n A 1 64 ALA 64 282 282 ALA ALA A . n A 1 65 GLN 65 283 283 GLN GLN A . n A 1 66 ALA 66 284 284 ALA ALA A . n A 1 67 GLY 67 285 285 GLY GLY A . n A 1 68 TYR 68 286 286 TYR TYR A . n A 1 69 ARG 69 287 287 ARG ARG A . n A 1 70 VAL 70 288 288 VAL VAL A . n A 1 71 LEU 71 289 289 LEU LEU A . n A 1 72 ALA 72 290 290 ALA ALA A . n A 1 73 MET 73 291 291 MET MET A . n A 1 74 ASP 74 292 292 ASP ASP A . n A 1 75 MET 75 293 293 MET MET A . n A 1 76 LYS 76 294 294 LYS LYS A . n A 1 77 GLY 77 295 295 GLY GLY A . n A 1 78 TYR 78 296 296 TYR TYR A . n A 1 79 GLY 79 297 297 GLY GLY A . n A 1 80 GLU 80 298 298 GLU GLU A . n A 1 81 SER 81 299 299 SER SER A . n A 1 82 SER 82 300 300 SER SER A . n A 1 83 ALA 83 301 301 ALA ALA A . n A 1 84 PRO 84 302 302 PRO PRO A . n A 1 85 PRO 85 303 303 PRO PRO A . n A 1 86 GLU 86 304 304 GLU GLU A . n A 1 87 ILE 87 305 305 ILE ILE A . n A 1 88 GLU 88 306 306 GLU GLU A . n A 1 89 GLU 89 307 307 GLU GLU A . n A 1 90 TYR 90 308 308 TYR TYR A . n A 1 91 CYS 91 309 309 CYS CYS A . n A 1 92 MET 92 310 310 MET MET A . n A 1 93 GLU 93 311 311 GLU GLU A . n A 1 94 VAL 94 312 312 VAL VAL A . n A 1 95 LEU 95 313 313 LEU LEU A . n A 1 96 CYS 96 314 314 CYS CYS A . n A 1 97 LYS 97 315 315 LYS LYS A . n A 1 98 GLU 98 316 316 GLU GLU A . n A 1 99 MET 99 317 317 MET MET A . n A 1 100 VAL 100 318 318 VAL VAL A . n A 1 101 THR 101 319 319 THR THR A . n A 1 102 PHE 102 320 320 PHE PHE A . n A 1 103 LEU 103 321 321 LEU LEU A . n A 1 104 ASP 104 322 322 ASP ASP A . n A 1 105 LYS 105 323 323 LYS LYS A . n A 1 106 LEU 106 324 324 LEU LEU A . n A 1 107 GLY 107 325 325 GLY GLY A . n A 1 108 LEU 108 326 326 LEU LEU A . n A 1 109 SER 109 327 327 SER SER A . n A 1 110 GLN 110 328 328 GLN GLN A . n A 1 111 ALA 111 329 329 ALA ALA A . n A 1 112 VAL 112 330 330 VAL VAL A . n A 1 113 PHE 113 331 331 PHE PHE A . n A 1 114 ILE 114 332 332 ILE ILE A . n A 1 115 GLY 115 333 333 GLY GLY A . n A 1 116 HIS 116 334 334 HIS HIS A . n A 1 117 ASP 117 335 335 ASP ASP A . n A 1 118 TRP 118 336 336 TRP TRP A . n A 1 119 GLY 119 337 337 GLY GLY A . n A 1 120 GLY 120 338 338 GLY GLY A . n A 1 121 MET 121 339 339 MET MET A . n A 1 122 LEU 122 340 340 LEU LEU A . n A 1 123 VAL 123 341 341 VAL VAL A . n A 1 124 TRP 124 342 342 TRP TRP A . n A 1 125 TYR 125 343 343 TYR TYR A . n A 1 126 MET 126 344 344 MET MET A . n A 1 127 ALA 127 345 345 ALA ALA A . n A 1 128 LEU 128 346 346 LEU LEU A . n A 1 129 PHE 129 347 347 PHE PHE A . n A 1 130 TYR 130 348 348 TYR TYR A . n A 1 131 PRO 131 349 349 PRO PRO A . n A 1 132 GLU 132 350 350 GLU GLU A . n A 1 133 ARG 133 351 351 ARG ARG A . n A 1 134 VAL 134 352 352 VAL VAL A . n A 1 135 ARG 135 353 353 ARG ARG A . n A 1 136 ALA 136 354 354 ALA ALA A . n A 1 137 VAL 137 355 355 VAL VAL A . n A 1 138 ALA 138 356 356 ALA ALA A . n A 1 139 SER 139 357 357 SER SER A . n A 1 140 LEU 140 358 358 LEU LEU A . n A 1 141 ASN 141 359 359 ASN ASN A . n A 1 142 THR 142 360 360 THR THR A . n A 1 143 PRO 143 361 361 PRO PRO A . n A 1 144 PHE 144 362 362 PHE PHE A . n A 1 145 ILE 145 363 363 ILE ILE A . n A 1 146 PRO 146 364 364 PRO PRO A . n A 1 147 ALA 147 365 365 ALA ALA A . n A 1 148 ASN 148 366 366 ASN ASN A . n A 1 149 PRO 149 367 367 PRO PRO A . n A 1 150 ASN 150 368 368 ASN ASN A . n A 1 151 MET 151 369 369 MET MET A . n A 1 152 SER 152 370 370 SER SER A . n A 1 153 PRO 153 371 371 PRO PRO A . n A 1 154 LEU 154 372 372 LEU LEU A . n A 1 155 GLU 155 373 373 GLU GLU A . n A 1 156 SER 156 374 374 SER SER A . n A 1 157 ILE 157 375 375 ILE ILE A . n A 1 158 LYS 158 376 376 LYS LYS A . n A 1 159 ALA 159 377 377 ALA ALA A . n A 1 160 ASN 160 378 378 ASN ASN A . n A 1 161 PRO 161 379 379 PRO PRO A . n A 1 162 VAL 162 380 380 VAL VAL A . n A 1 163 PHE 163 381 381 PHE PHE A . n A 1 164 ASP 164 382 382 ASP ASP A . n A 1 165 TYR 165 383 383 TYR TYR A . n A 1 166 GLN 166 384 384 GLN GLN A . n A 1 167 LEU 167 385 385 LEU LEU A . n A 1 168 TYR 168 386 386 TYR TYR A . n A 1 169 PHE 169 387 387 PHE PHE A . n A 1 170 GLN 170 388 388 GLN GLN A . n A 1 171 GLU 171 389 389 GLU GLU A . n A 1 172 PRO 172 390 390 PRO PRO A . n A 1 173 GLY 173 391 391 GLY GLY A . n A 1 174 VAL 174 392 392 VAL VAL A . n A 1 175 ALA 175 393 393 ALA ALA A . n A 1 176 GLU 176 394 394 GLU GLU A . n A 1 177 ALA 177 395 395 ALA ALA A . n A 1 178 GLU 178 396 396 GLU GLU A . n A 1 179 LEU 179 397 397 LEU LEU A . n A 1 180 GLU 180 398 398 GLU GLU A . n A 1 181 GLN 181 399 399 GLN GLN A . n A 1 182 ASN 182 400 400 ASN ASN A . n A 1 183 LEU 183 401 401 LEU LEU A . n A 1 184 SER 184 402 402 SER SER A . n A 1 185 ARG 185 403 403 ARG ARG A . n A 1 186 THR 186 404 404 THR THR A . n A 1 187 PHE 187 405 405 PHE PHE A . n A 1 188 LYS 188 406 406 LYS LYS A . n A 1 189 SER 189 407 407 SER SER A . n A 1 190 LEU 190 408 408 LEU LEU A . n A 1 191 PHE 191 409 409 PHE PHE A . n A 1 192 ARG 192 410 410 ARG ARG A . n A 1 193 ALA 193 411 411 ALA ALA A . n A 1 194 SER 194 412 412 SER SER A . n A 1 195 ASP 195 413 413 ASP ASP A . n A 1 196 GLU 196 414 414 GLU GLU A . n A 1 197 SER 197 415 415 SER SER A . n A 1 198 VAL 198 416 416 VAL VAL A . n A 1 199 LEU 199 417 417 LEU LEU A . n A 1 200 SER 200 418 418 SER SER A . n A 1 201 MET 201 419 419 MET MET A . n A 1 202 HIS 202 420 420 HIS HIS A . n A 1 203 LYS 203 421 421 LYS LYS A . n A 1 204 VAL 204 422 422 VAL VAL A . n A 1 205 CYS 205 423 423 CYS CYS A . n A 1 206 GLU 206 424 424 GLU GLU A . n A 1 207 ALA 207 425 425 ALA ALA A . n A 1 208 GLY 208 426 426 GLY GLY A . n A 1 209 GLY 209 427 427 GLY GLY A . n A 1 210 LEU 210 428 428 LEU LEU A . n A 1 211 PHE 211 429 429 PHE PHE A . n A 1 212 VAL 212 430 430 VAL VAL A . n A 1 213 ASN 213 431 431 ASN ASN A . n A 1 214 SER 214 432 432 SER SER A . n A 1 215 PRO 215 433 433 PRO PRO A . n A 1 216 GLU 216 434 434 GLU GLU A . n A 1 217 GLU 217 435 435 GLU GLU A . n A 1 218 PRO 218 436 436 PRO PRO A . n A 1 219 SER 219 437 437 SER SER A . n A 1 220 LEU 220 438 438 LEU LEU A . n A 1 221 SER 221 439 439 SER SER A . n A 1 222 ARG 222 440 440 ARG ARG A . n A 1 223 MET 223 441 441 MET MET A . n A 1 224 VAL 224 442 442 VAL VAL A . n A 1 225 THR 225 443 443 THR THR A . n A 1 226 GLU 226 444 444 GLU GLU A . n A 1 227 GLU 227 445 445 GLU GLU A . n A 1 228 GLU 228 446 446 GLU GLU A . n A 1 229 ILE 229 447 447 ILE ILE A . n A 1 230 GLN 230 448 448 GLN GLN A . n A 1 231 PHE 231 449 449 PHE PHE A . n A 1 232 TYR 232 450 450 TYR TYR A . n A 1 233 VAL 233 451 451 VAL VAL A . n A 1 234 GLN 234 452 452 GLN GLN A . n A 1 235 GLN 235 453 453 GLN GLN A . n A 1 236 PHE 236 454 454 PHE PHE A . n A 1 237 LYS 237 455 455 LYS LYS A . n A 1 238 LYS 238 456 456 LYS LYS A . n A 1 239 SER 239 457 457 SER SER A . n A 1 240 GLY 240 458 458 GLY GLY A . n A 1 241 PHE 241 459 459 PHE PHE A . n A 1 242 ARG 242 460 460 ARG ARG A . n A 1 243 GLY 243 461 461 GLY GLY A . n A 1 244 PRO 244 462 462 PRO PRO A . n A 1 245 LEU 245 463 463 LEU LEU A . n A 1 246 ASN 246 464 464 ASN ASN A . n A 1 247 TRP 247 465 465 TRP TRP A . n A 1 248 TYR 248 466 466 TYR TYR A . n A 1 249 ARG 249 467 467 ARG ARG A . n A 1 250 ASN 250 468 468 ASN ASN A . n A 1 251 MET 251 469 469 MET MET A . n A 1 252 GLU 252 470 470 GLU GLU A . n A 1 253 ARG 253 471 471 ARG ARG A . n A 1 254 ASN 254 472 472 ASN ASN A . n A 1 255 TRP 255 473 473 TRP TRP A . n A 1 256 LYS 256 474 474 LYS LYS A . n A 1 257 TRP 257 475 475 TRP TRP A . n A 1 258 ALA 258 476 476 ALA ALA A . n A 1 259 CYS 259 477 477 CYS CYS A . n A 1 260 LYS 260 478 478 LYS LYS A . n A 1 261 SER 261 479 479 SER SER A . n A 1 262 LEU 262 480 480 LEU LEU A . n A 1 263 GLY 263 481 481 GLY GLY A . n A 1 264 ARG 264 482 482 ARG ARG A . n A 1 265 LYS 265 483 483 LYS LYS A . n A 1 266 ILE 266 484 484 ILE ILE A . n A 1 267 LEU 267 485 485 LEU LEU A . n A 1 268 ILE 268 486 486 ILE ILE A . n A 1 269 PRO 269 487 487 PRO PRO A . n A 1 270 ALA 270 488 488 ALA ALA A . n A 1 271 LEU 271 489 489 LEU LEU A . n A 1 272 MET 272 490 490 MET MET A . n A 1 273 VAL 273 491 491 VAL VAL A . n A 1 274 THR 274 492 492 THR THR A . n A 1 275 ALA 275 493 493 ALA ALA A . n A 1 276 GLU 276 494 494 GLU GLU A . n A 1 277 LYS 277 495 495 LYS LYS A . n A 1 278 ASP 278 496 496 ASP ASP A . n A 1 279 PHE 279 497 497 PHE PHE A . n A 1 280 VAL 280 498 498 VAL VAL A . n A 1 281 LEU 281 499 499 LEU LEU A . n A 1 282 VAL 282 500 500 VAL VAL A . n A 1 283 PRO 283 501 501 PRO PRO A . n A 1 284 GLN 284 502 502 GLN GLN A . n A 1 285 MET 285 503 503 MET MET A . n A 1 286 SER 286 504 504 SER SER A . n A 1 287 GLN 287 505 505 GLN GLN A . n A 1 288 HIS 288 506 506 HIS HIS A . n A 1 289 MET 289 507 507 MET MET A . n A 1 290 GLU 290 508 508 GLU GLU A . n A 1 291 ASP 291 509 509 ASP ASP A . n A 1 292 TRP 292 510 510 TRP TRP A . n A 1 293 ILE 293 511 511 ILE ILE A . n A 1 294 PRO 294 512 512 PRO PRO A . n A 1 295 HIS 295 513 513 HIS HIS A . n A 1 296 LEU 296 514 514 LEU LEU A . n A 1 297 LYS 297 515 515 LYS LYS A . n A 1 298 ARG 298 516 516 ARG ARG A . n A 1 299 GLY 299 517 517 GLY GLY A . n A 1 300 HIS 300 518 518 HIS HIS A . n A 1 301 ILE 301 519 519 ILE ILE A . n A 1 302 GLU 302 520 520 GLU GLU A . n A 1 303 ASP 303 521 521 ASP ASP A . n A 1 304 CYS 304 522 522 CYS CYS A . n A 1 305 GLY 305 523 523 GLY GLY A . n A 1 306 HIS 306 524 524 HIS HIS A . n A 1 307 TRP 307 525 525 TRP TRP A . n A 1 308 THR 308 526 526 THR THR A . n A 1 309 GLN 309 527 527 GLN GLN A . n A 1 310 MET 310 528 528 MET MET A . n A 1 311 ASP 311 529 529 ASP ASP A . n A 1 312 LYS 312 530 530 LYS LYS A . n A 1 313 PRO 313 531 531 PRO PRO A . n A 1 314 THR 314 532 532 THR THR A . n A 1 315 GLU 315 533 533 GLU GLU A . n A 1 316 VAL 316 534 534 VAL VAL A . n A 1 317 ASN 317 535 535 ASN ASN A . n A 1 318 GLN 318 536 536 GLN GLN A . n A 1 319 ILE 319 537 537 ILE ILE A . n A 1 320 LEU 320 538 538 LEU LEU A . n A 1 321 ILE 321 539 539 ILE ILE A . n A 1 322 LYS 322 540 540 LYS LYS A . n A 1 323 TRP 323 541 541 TRP TRP A . n A 1 324 LEU 324 542 542 LEU LEU A . n A 1 325 ASP 325 543 543 ASP ASP A . n A 1 326 SER 326 544 544 SER SER A . n A 1 327 ASP 327 545 545 ASP ASP A . n A 1 328 ALA 328 546 546 ALA ALA A . n A 1 329 ARG 329 547 547 ARG ARG A . n A 1 330 ASN 330 548 ? ? ? A . n A 1 331 PRO 331 549 ? ? ? A . n A 1 332 PRO 332 550 ? ? ? A . n A 1 333 VAL 333 551 ? ? ? A . n A 1 334 VAL 334 552 ? ? ? A . n A 1 335 SER 335 553 ? ? ? A . n A 1 336 LYS 336 554 ? ? ? A . n A 1 337 MET 337 555 ? ? ? A . n A 1 338 LEU 338 556 ? ? ? A . n A 1 339 LEU 339 557 ? ? ? A . n A 1 340 GLU 340 558 ? ? ? A . n A 1 341 HIS 341 559 ? ? ? A . n A 1 342 HIS 342 560 ? ? ? A . n A 1 343 HIS 343 561 ? ? ? A . n A 1 344 HIS 344 562 ? ? ? A . n A 1 345 HIS 345 563 ? ? ? A . n A 1 346 HIS 346 564 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OWW 1 601 1 OWW 1HK A . C 3 HOH 1 701 112 HOH HOH A . C 3 HOH 2 702 38 HOH HOH A . C 3 HOH 3 703 83 HOH HOH A . C 3 HOH 4 704 6 HOH HOH A . C 3 HOH 5 705 100 HOH HOH A . C 3 HOH 6 706 95 HOH HOH A . C 3 HOH 7 707 90 HOH HOH A . C 3 HOH 8 708 52 HOH HOH A . C 3 HOH 9 709 12 HOH HOH A . C 3 HOH 10 710 64 HOH HOH A . C 3 HOH 11 711 10 HOH HOH A . C 3 HOH 12 712 49 HOH HOH A . C 3 HOH 13 713 84 HOH HOH A . C 3 HOH 14 714 16 HOH HOH A . C 3 HOH 15 715 27 HOH HOH A . C 3 HOH 16 716 66 HOH HOH A . C 3 HOH 17 717 103 HOH HOH A . C 3 HOH 18 718 11 HOH HOH A . C 3 HOH 19 719 76 HOH HOH A . C 3 HOH 20 720 70 HOH HOH A . C 3 HOH 21 721 7 HOH HOH A . C 3 HOH 22 722 104 HOH HOH A . C 3 HOH 23 723 101 HOH HOH A . C 3 HOH 24 724 78 HOH HOH A . C 3 HOH 25 725 5 HOH HOH A . C 3 HOH 26 726 23 HOH HOH A . C 3 HOH 27 727 79 HOH HOH A . C 3 HOH 28 728 48 HOH HOH A . C 3 HOH 29 729 111 HOH HOH A . C 3 HOH 30 730 60 HOH HOH A . C 3 HOH 31 731 110 HOH HOH A . C 3 HOH 32 732 91 HOH HOH A . C 3 HOH 33 733 13 HOH HOH A . C 3 HOH 34 734 53 HOH HOH A . C 3 HOH 35 735 69 HOH HOH A . C 3 HOH 36 736 42 HOH HOH A . C 3 HOH 37 737 33 HOH HOH A . C 3 HOH 38 738 25 HOH HOH A . C 3 HOH 39 739 28 HOH HOH A . C 3 HOH 40 740 17 HOH HOH A . C 3 HOH 41 741 14 HOH HOH A . C 3 HOH 42 742 8 HOH HOH A . C 3 HOH 43 743 102 HOH HOH A . C 3 HOH 44 744 2 HOH HOH A . C 3 HOH 45 745 77 HOH HOH A . C 3 HOH 46 746 55 HOH HOH A . C 3 HOH 47 747 19 HOH HOH A . C 3 HOH 48 748 1 HOH HOH A . C 3 HOH 49 749 29 HOH HOH A . C 3 HOH 50 750 82 HOH HOH A . C 3 HOH 51 751 75 HOH HOH A . C 3 HOH 52 752 62 HOH HOH A . C 3 HOH 53 753 47 HOH HOH A . C 3 HOH 54 754 22 HOH HOH A . C 3 HOH 55 755 30 HOH HOH A . C 3 HOH 56 756 80 HOH HOH A . C 3 HOH 57 757 21 HOH HOH A . C 3 HOH 58 758 106 HOH HOH A . C 3 HOH 59 759 50 HOH HOH A . C 3 HOH 60 760 37 HOH HOH A . C 3 HOH 61 761 43 HOH HOH A . C 3 HOH 62 762 61 HOH HOH A . C 3 HOH 63 763 54 HOH HOH A . C 3 HOH 64 764 39 HOH HOH A . C 3 HOH 65 765 20 HOH HOH A . C 3 HOH 66 766 56 HOH HOH A . C 3 HOH 67 767 107 HOH HOH A . C 3 HOH 68 768 26 HOH HOH A . C 3 HOH 69 769 92 HOH HOH A . C 3 HOH 70 770 32 HOH HOH A . C 3 HOH 71 771 31 HOH HOH A . C 3 HOH 72 772 81 HOH HOH A . C 3 HOH 73 773 46 HOH HOH A . C 3 HOH 74 774 59 HOH HOH A . C 3 HOH 75 775 73 HOH HOH A . C 3 HOH 76 776 74 HOH HOH A . C 3 HOH 77 777 34 HOH HOH A . C 3 HOH 78 778 18 HOH HOH A . C 3 HOH 79 779 85 HOH HOH A . C 3 HOH 80 780 15 HOH HOH A . C 3 HOH 81 781 35 HOH HOH A . C 3 HOH 82 782 108 HOH HOH A . C 3 HOH 83 783 45 HOH HOH A . C 3 HOH 84 784 72 HOH HOH A . C 3 HOH 85 785 51 HOH HOH A . C 3 HOH 86 786 40 HOH HOH A . C 3 HOH 87 787 87 HOH HOH A . C 3 HOH 88 788 97 HOH HOH A . C 3 HOH 89 789 109 HOH HOH A . C 3 HOH 90 790 88 HOH HOH A . C 3 HOH 91 791 86 HOH HOH A . C 3 HOH 92 792 105 HOH HOH A . C 3 HOH 93 793 99 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C 1 2 A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-10-21 2 'Structure model' 1 1 2020-11-04 3 'Structure model' 1 2 2021-02-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_struct_assembly 3 3 'Structure model' pdbx_struct_assembly_gen 4 3 'Structure model' pdbx_struct_assembly_prop 5 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_pdbx_struct_assembly.details' 5 3 'Structure model' '_pdbx_struct_assembly.method_details' 6 3 'Structure model' '_pdbx_struct_assembly.oligomeric_count' 7 3 'Structure model' '_pdbx_struct_assembly.oligomeric_details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -4.0363 -13.6950 -32.9433 0.2152 ? -0.0052 ? 0.0333 ? 0.2407 ? 0.0004 ? 0.2796 ? 3.6854 ? 1.2261 ? -0.4709 ? 3.9954 ? 0.0143 ? 2.9972 ? -0.0692 ? -0.0029 ? -0.1366 ? -0.2344 ? 0.0278 ? -0.3477 ? 0.1627 ? 0.1668 ? 0.0311 ? 2 'X-RAY DIFFRACTION' ? refined -18.1581 -27.6078 -44.6743 0.6557 ? -0.1157 ? -0.0167 ? 0.4811 ? -0.0101 ? 0.5217 ? 8.9919 ? -3.2139 ? -3.5953 ? 6.8003 ? 3.4155 ? 2.7971 ? -0.4856 ? -0.1378 ? -1.3713 ? -0.0617 ? 0.1818 ? 0.5029 ? 0.8205 ? -0.1211 ? 0.3435 ? 3 'X-RAY DIFFRACTION' ? refined -14.0899 -20.6489 -31.7393 0.2763 ? -0.0726 ? 0.0326 ? 0.2317 ? 0.0258 ? 0.3135 ? 3.8793 ? -0.7208 ? -0.0611 ? 4.3081 ? -0.2073 ? 3.5597 ? -0.0828 ? -0.1036 ? -0.2960 ? -0.2320 ? 0.1256 ? 0.0799 ? 0.3006 ? -0.1686 ? -0.0481 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 229 ? ? A 370 ? ;chain 'A' and (resid 229 through 370 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 371 ? ? A 424 ? ;chain 'A' and (resid 371 through 424 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? A 425 ? ? A 547 ? ;chain 'A' and (resid 425 through 547 ) ; # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.12_2829 1 ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 2 ? 'data scaling' ? ? 'Wolfgang Kabsch' ? ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? XSCALE ? ? package . 3 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Apr. 1, 2019' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.25 5 # _pdbx_entry_details.entry_id 6YL4 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 231 ? B -104.44 -165.00 2 1 GLU A 269 ? ? -120.88 -142.46 3 1 ASP A 335 ? ? 62.02 -126.33 4 1 ASN A 359 ? ? 74.96 -45.05 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 219 ? A MET 1 2 1 Y 1 A ALA 220 ? A ALA 2 3 1 Y 1 A SER 221 ? A SER 3 4 1 Y 1 A LEU 222 ? A LEU 4 5 1 Y 1 A ASN 223 ? A ASN 5 6 1 Y 1 A THR 224 ? A THR 6 7 1 Y 1 A PRO 225 ? A PRO 7 8 1 Y 1 A ALA 226 ? A ALA 8 9 1 Y 1 A PRO 227 ? A PRO 9 10 1 Y 1 A LEU 228 ? A LEU 10 11 1 Y 1 A ASN 548 ? A ASN 330 12 1 Y 1 A PRO 549 ? A PRO 331 13 1 Y 1 A PRO 550 ? A PRO 332 14 1 Y 1 A VAL 551 ? A VAL 333 15 1 Y 1 A VAL 552 ? A VAL 334 16 1 Y 1 A SER 553 ? A SER 335 17 1 Y 1 A LYS 554 ? A LYS 336 18 1 Y 1 A MET 555 ? A MET 337 19 1 Y 1 A LEU 556 ? A LEU 338 20 1 Y 1 A LEU 557 ? A LEU 339 21 1 Y 1 A GLU 558 ? A GLU 340 22 1 Y 1 A HIS 559 ? A HIS 341 23 1 Y 1 A HIS 560 ? A HIS 342 24 1 Y 1 A HIS 561 ? A HIS 343 25 1 Y 1 A HIS 562 ? A HIS 344 26 1 Y 1 A HIS 563 ? A HIS 345 27 1 Y 1 A HIS 564 ? A HIS 346 # loop_ _pdbx_audit_support.country _pdbx_audit_support.funding_organization _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal Germany 'German Research Foundation (DFG)' PR1405/2-2 1 Germany 'German Research Foundation (DFG)' PR1405/4-1 2 Germany 'German Research Foundation (DFG)' 'SFB1039 TP A07' 3 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id OWW _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id OWW _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-[(3~{R})-3-[aminocarbonyl(oxidanyl)amino]but-1-ynyl]-~{N}-[(3~{S})-3-phenyl-3-[4-(trifluoromethyloxy)phenyl]propyl]benzamide' OWW 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #