HEADER APOPTOSIS 07-APR-20 6YLD TITLE CRYSTAL STRUCTURE OF TRICHOPLAX ADHAERENS TRBCL-2L2 BOUND TO TRBAK BH3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BCL-2-LIKE PROTEIN 1; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BCL-2 HOMOLOGOUS ANTAGONIST/KILLER; COMPND 7 CHAIN: B, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRICHOPLAX SP. H2; SOURCE 3 ORGANISM_TAXID: 287889; SOURCE 4 GENE: TRISPH2_005532; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: TRICHOPLAX SP. H2; SOURCE 12 ORGANISM_TAXID: 287889 KEYWDS BCL-2, BAK, TRICHOPLAX ADHAERENS, APOPTOSIS EXPDTA X-RAY DIFFRACTION AUTHOR J.D SA,S.BANJARA,M.KVANSAKUL REVDAT 2 24-JAN-24 6YLD 1 REMARK REVDAT 1 17-MAR-21 6YLD 0 JRNL AUTH N.POPGEORGIEV,J.D.SA,L.JABBOUR,S.BANJARA,T.T.M.NGUYEN, JRNL AUTH 2 A.AKHAVAN-E-SABET,R.GADET,N.RALCHEV,S.MANON,M.G.HINDS, JRNL AUTH 3 H.J.OSIGUS,B.SCHIERWATER,P.O.HUMBERT,R.RIMOKH,G.GILLET, JRNL AUTH 4 M.KVANSAKUL JRNL TITL ANCIENT AND CONSERVED FUNCTIONAL INTERPLAY BETWEEN BCL-2 JRNL TITL 2 FAMILY PROTEINS IN THE MITOCHONDRIAL PATHWAY OF APOPTOSIS. JRNL REF SCI ADV V. 6 2020 JRNL REFN ESSN 2375-2548 JRNL PMID 32998881 JRNL DOI 10.1126/SCIADV.ABC4149 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 56386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.170 REMARK 3 FREE R VALUE TEST SET COUNT : 2350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.6400 - 3.5900 0.98 3303 145 0.1668 0.1923 REMARK 3 2 3.5900 - 2.8500 0.97 3226 136 0.1634 0.1834 REMARK 3 3 2.8500 - 2.4900 0.97 3292 146 0.1637 0.1791 REMARK 3 4 2.4900 - 2.2600 0.97 3210 137 0.1517 0.1910 REMARK 3 5 2.2600 - 2.1000 0.97 3280 150 0.1556 0.1705 REMARK 3 6 2.1000 - 1.9800 0.96 3223 142 0.1650 0.1856 REMARK 3 7 1.9800 - 1.8800 0.96 3207 139 0.1728 0.2052 REMARK 3 8 1.8800 - 1.8000 0.96 3185 142 0.1951 0.2401 REMARK 3 9 1.8000 - 1.7300 0.96 3225 133 0.2067 0.2502 REMARK 3 10 1.7300 - 1.6700 0.96 3200 137 0.2034 0.2409 REMARK 3 11 1.6700 - 1.6100 0.95 3174 138 0.2189 0.2505 REMARK 3 12 1.6100 - 1.5700 0.95 3167 138 0.2419 0.2741 REMARK 3 13 1.5700 - 1.5300 0.95 3195 139 0.2589 0.3302 REMARK 3 14 1.5300 - 1.4900 0.94 3118 136 0.2755 0.2898 REMARK 3 15 1.4900 - 1.4600 0.93 3129 136 0.3031 0.3460 REMARK 3 16 1.4600 - 1.4200 0.94 3172 138 0.3419 0.3519 REMARK 3 17 1.4200 - 1.4000 0.81 2730 118 0.3532 0.3582 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.205 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2977 REMARK 3 ANGLE : 0.875 4018 REMARK 3 CHIRALITY : 0.059 429 REMARK 3 PLANARITY : 0.004 512 REMARK 3 DIHEDRAL : 17.043 1079 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0818 38.7677 24.0332 REMARK 3 T TENSOR REMARK 3 T11: 0.1624 T22: 0.1963 REMARK 3 T33: 0.1603 T12: -0.0248 REMARK 3 T13: -0.0265 T23: 0.0466 REMARK 3 L TENSOR REMARK 3 L11: 5.1672 L22: 1.8238 REMARK 3 L33: 1.9048 L12: -0.7325 REMARK 3 L13: -0.2521 L23: 0.1460 REMARK 3 S TENSOR REMARK 3 S11: -0.0087 S12: 0.0877 S13: 0.3841 REMARK 3 S21: -0.0541 S22: -0.0332 S23: 0.0717 REMARK 3 S31: -0.2531 S32: 0.1794 S33: 0.0324 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0120 40.7011 20.7019 REMARK 3 T TENSOR REMARK 3 T11: 0.2795 T22: 0.3153 REMARK 3 T33: 0.3135 T12: 0.0076 REMARK 3 T13: -0.0176 T23: 0.0495 REMARK 3 L TENSOR REMARK 3 L11: 1.3608 L22: 1.4390 REMARK 3 L33: 2.1939 L12: -1.4021 REMARK 3 L13: -1.7231 L23: 1.7756 REMARK 3 S TENSOR REMARK 3 S11: 0.2505 S12: 0.1019 S13: 0.2484 REMARK 3 S21: -0.6623 S22: -0.1071 S23: -0.0683 REMARK 3 S31: -0.4086 S32: 0.0391 S33: -0.0606 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 39 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4543 39.2467 34.5099 REMARK 3 T TENSOR REMARK 3 T11: 0.1602 T22: 0.1512 REMARK 3 T33: 0.1575 T12: -0.0169 REMARK 3 T13: -0.0105 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 2.4135 L22: 7.3460 REMARK 3 L33: 2.1557 L12: -2.0942 REMARK 3 L13: 0.7455 L23: -1.6341 REMARK 3 S TENSOR REMARK 3 S11: -0.0776 S12: -0.0750 S13: 0.2268 REMARK 3 S21: 0.0185 S22: 0.0795 S23: -0.0529 REMARK 3 S31: -0.3161 S32: 0.1220 S33: -0.0259 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4069 19.6513 30.9419 REMARK 3 T TENSOR REMARK 3 T11: 0.2017 T22: 0.1295 REMARK 3 T33: 0.1782 T12: 0.0015 REMARK 3 T13: 0.0050 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 2.1387 L22: 2.1858 REMARK 3 L33: 7.9160 L12: -0.0144 REMARK 3 L13: 2.9709 L23: 2.8456 REMARK 3 S TENSOR REMARK 3 S11: 0.0365 S12: 0.1321 S13: -0.1127 REMARK 3 S21: -0.1397 S22: -0.0443 S23: 0.1379 REMARK 3 S31: 0.2740 S32: 0.2748 S33: 0.0520 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7863 27.4974 24.5904 REMARK 3 T TENSOR REMARK 3 T11: 0.1022 T22: 0.1402 REMARK 3 T33: 0.1067 T12: 0.0056 REMARK 3 T13: -0.0051 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.5285 L22: 0.5203 REMARK 3 L33: 1.3519 L12: 0.1969 REMARK 3 L13: 0.1573 L23: 0.0146 REMARK 3 S TENSOR REMARK 3 S11: 0.0026 S12: 0.0939 S13: -0.0161 REMARK 3 S21: 0.0034 S22: -0.0270 S23: -0.0172 REMARK 3 S31: 0.0824 S32: 0.0199 S33: 0.0228 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7314 40.9947 37.3041 REMARK 3 T TENSOR REMARK 3 T11: 0.2426 T22: 0.2054 REMARK 3 T33: 0.1684 T12: 0.0701 REMARK 3 T13: 0.0247 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.7885 L22: 1.7332 REMARK 3 L33: 0.8635 L12: 0.6729 REMARK 3 L13: 0.5248 L23: -0.0513 REMARK 3 S TENSOR REMARK 3 S11: 0.0279 S12: -0.0118 S13: 0.3642 REMARK 3 S21: -0.0065 S22: -0.0104 S23: -0.0058 REMARK 3 S31: -0.4792 S32: -0.2327 S33: -0.0130 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3736 24.4915 39.6865 REMARK 3 T TENSOR REMARK 3 T11: 0.1153 T22: 0.1131 REMARK 3 T33: 0.0974 T12: -0.0042 REMARK 3 T13: 0.0070 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 2.8174 L22: 4.0510 REMARK 3 L33: 4.8478 L12: 0.3295 REMARK 3 L13: 0.3444 L23: 1.8626 REMARK 3 S TENSOR REMARK 3 S11: -0.0129 S12: -0.0448 S13: -0.1057 REMARK 3 S21: 0.1144 S22: 0.0417 S23: 0.0315 REMARK 3 S31: 0.1392 S32: 0.1118 S33: -0.0255 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 3 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.1979 12.6418 48.1894 REMARK 3 T TENSOR REMARK 3 T11: 0.1520 T22: 0.1573 REMARK 3 T33: 0.1382 T12: 0.0002 REMARK 3 T13: 0.0006 T23: -0.0246 REMARK 3 L TENSOR REMARK 3 L11: 1.5635 L22: 1.4802 REMARK 3 L33: 1.0831 L12: -0.2105 REMARK 3 L13: 0.0848 L23: 0.0474 REMARK 3 S TENSOR REMARK 3 S11: 0.0438 S12: 0.0194 S13: -0.1983 REMARK 3 S21: -0.1492 S22: 0.0179 S23: 0.0155 REMARK 3 S31: 0.0948 S32: 0.0342 S33: -0.0538 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 39 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.0156 18.1667 60.0358 REMARK 3 T TENSOR REMARK 3 T11: 0.1367 T22: 0.1705 REMARK 3 T33: 0.1641 T12: 0.0014 REMARK 3 T13: 0.0092 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 1.3856 L22: 1.6202 REMARK 3 L33: 1.3969 L12: -0.1614 REMARK 3 L13: 0.1035 L23: 0.1642 REMARK 3 S TENSOR REMARK 3 S11: -0.0350 S12: -0.1579 S13: 0.1072 REMARK 3 S21: -0.1037 S22: 0.0659 S23: 0.0696 REMARK 3 S31: -0.0507 S32: -0.0779 S33: 0.0008 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 71 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6420 19.9793 54.9826 REMARK 3 T TENSOR REMARK 3 T11: 0.1033 T22: 0.1335 REMARK 3 T33: 0.1096 T12: 0.0128 REMARK 3 T13: 0.0020 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.5870 L22: 0.5061 REMARK 3 L33: 1.4754 L12: 0.1700 REMARK 3 L13: -0.1314 L23: -0.1730 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: -0.0045 S13: -0.0122 REMARK 3 S21: 0.0155 S22: 0.0128 S23: 0.0001 REMARK 3 S31: 0.0542 S32: 0.0830 S33: -0.0117 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 3 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3224 23.5778 67.4551 REMARK 3 T TENSOR REMARK 3 T11: 0.1278 T22: 0.2193 REMARK 3 T33: 0.1131 T12: 0.0199 REMARK 3 T13: 0.0107 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 2.0215 L22: 4.0239 REMARK 3 L33: 3.4092 L12: 0.1385 REMARK 3 L13: -0.1583 L23: -1.7471 REMARK 3 S TENSOR REMARK 3 S11: 0.1086 S12: -0.1704 S13: 0.0951 REMARK 3 S21: 0.2174 S22: -0.0100 S23: 0.1391 REMARK 3 S31: -0.0937 S32: 0.0253 S33: -0.0658 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YLD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107804. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56421 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 39.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 1.16100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1PQ1 REMARK 200 REMARK 200 REMARK: RECTANGULAR SHAPED REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 CITRATE PH 5.8, 29 % W/V PEG 4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 LEU A 3 REMARK 465 GLY A 4 REMARK 465 PRO B 1 REMARK 465 GLU B 26 REMARK 465 GLY C 1 REMARK 465 PRO C 2 REMARK 465 PRO D 1 REMARK 465 SER D 2 REMARK 465 GLN D 24 REMARK 465 ASN D 25 REMARK 465 GLU D 26 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 25 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD22 ASN A 24 O HOH A 305 1.41 REMARK 500 O HOH A 303 O HOH A 309 1.93 REMARK 500 O HOH B 109 O HOH C 397 1.96 REMARK 500 O HOH D 111 O HOH D 114 1.97 REMARK 500 O HOH C 357 O HOH C 444 2.06 REMARK 500 OD1 ASN A 53 O HOH A 301 2.08 REMARK 500 O HOH C 305 O HOH C 424 2.11 REMARK 500 O HOH A 306 O HOH A 377 2.13 REMARK 500 O HOH A 397 O HOH A 416 2.13 REMARK 500 OD1 ASP A 29 O HOH A 302 2.15 REMARK 500 OD1 ASN C 24 O HOH C 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 401 O HOH C 318 1554 2.00 REMARK 500 O HOH A 303 O HOH C 440 1554 2.01 REMARK 500 O HOH A 359 O HOH C 408 1554 2.05 REMARK 500 O HOH C 365 O HOH C 429 1545 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 93.51 -66.13 REMARK 500 SER A 145 -145.16 58.52 REMARK 500 SER C 145 -150.09 60.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TAR C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 203 DBREF1 6YLD A 6 154 UNP A0A369S2N9_9METZ DBREF2 6YLD A A0A369S2N9 34 182 DBREF1 6YLD B 1 26 UNP A0A369S334_9METZ DBREF2 6YLD B A0A369S334 102 127 DBREF1 6YLD C 6 154 UNP A0A369S2N9_9METZ DBREF2 6YLD C A0A369S2N9 34 182 DBREF1 6YLD D 1 26 UNP A0A369S334_9METZ DBREF2 6YLD D A0A369S334 102 127 SEQADV 6YLD GLY A 1 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD PRO A 2 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD LEU A 3 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD GLY A 4 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD SER A 5 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD GLY C 1 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD PRO C 2 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD LEU C 3 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD GLY C 4 UNP A0A369S2N EXPRESSION TAG SEQADV 6YLD SER C 5 UNP A0A369S2N EXPRESSION TAG SEQRES 1 A 154 GLY PRO LEU GLY SER GLN PHE LEU VAL TYR LYS ASN ILE SEQRES 2 A 154 ILE LYS ASP TYR ILE GLN SER ARG LEU PHE ASN GLU GLY SEQRES 3 A 154 LEU LEU ASP GLY PRO TYR ARG CYS ASP ILE LYS ASP VAL SEQRES 4 A 154 LYS THR LYS LYS VAL SER GLU ARG LEU LYS GLU VAL GLY SEQRES 5 A 154 ASN GLU LEU GLU GLY LYS PHE LYS ASP SER PHE SER ASN SEQRES 6 A 154 MET CYS GLU ARG LEU THR ILE THR ASP THR THR ALA TYR SEQRES 7 A 154 PRO THR PHE VAL GLY VAL VAL ASN GLU LEU PHE SER THR SEQRES 8 A 154 GLY ILE ASN TRP GLY ARG ILE VAL ALA PHE ILE VAL PHE SEQRES 9 A 154 SER SER ARG LEU ALA ILE HIS PHE LYS ARG ASN GLY MET SEQRES 10 A 154 PRO GLU TYR VAL LYS SER VAL TYR GLY TRP VAL ALA ARG SEQRES 11 A 154 TYR MET HIS THR LYS LEU SER THR TRP ILE GLU ALA ASN SEQRES 12 A 154 ARG SER TRP ASP GLY PHE LEU ASP HIS PHE ASP SEQRES 1 B 26 PRO SER SER PRO THR SER GLU ILE GLY ARG HIS LEU ALA SEQRES 2 B 26 GLN LEU GLY ASP SER TYR SER VAL ARG PHE GLN ASN GLU SEQRES 1 C 154 GLY PRO LEU GLY SER GLN PHE LEU VAL TYR LYS ASN ILE SEQRES 2 C 154 ILE LYS ASP TYR ILE GLN SER ARG LEU PHE ASN GLU GLY SEQRES 3 C 154 LEU LEU ASP GLY PRO TYR ARG CYS ASP ILE LYS ASP VAL SEQRES 4 C 154 LYS THR LYS LYS VAL SER GLU ARG LEU LYS GLU VAL GLY SEQRES 5 C 154 ASN GLU LEU GLU GLY LYS PHE LYS ASP SER PHE SER ASN SEQRES 6 C 154 MET CYS GLU ARG LEU THR ILE THR ASP THR THR ALA TYR SEQRES 7 C 154 PRO THR PHE VAL GLY VAL VAL ASN GLU LEU PHE SER THR SEQRES 8 C 154 GLY ILE ASN TRP GLY ARG ILE VAL ALA PHE ILE VAL PHE SEQRES 9 C 154 SER SER ARG LEU ALA ILE HIS PHE LYS ARG ASN GLY MET SEQRES 10 C 154 PRO GLU TYR VAL LYS SER VAL TYR GLY TRP VAL ALA ARG SEQRES 11 C 154 TYR MET HIS THR LYS LEU SER THR TRP ILE GLU ALA ASN SEQRES 12 C 154 ARG SER TRP ASP GLY PHE LEU ASP HIS PHE ASP SEQRES 1 D 26 PRO SER SER PRO THR SER GLU ILE GLY ARG HIS LEU ALA SEQRES 2 D 26 GLN LEU GLY ASP SER TYR SER VAL ARG PHE GLN ASN GLU HET EDO A 201 10 HET TAR A 202 14 HET TAR A 203 14 HET TAR C 201 14 HET EDO C 202 10 HET EDO C 203 10 HETNAM EDO 1,2-ETHANEDIOL HETNAM TAR D(-)-TARTARIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO 3(C2 H6 O2) FORMUL 6 TAR 3(C4 H6 O6) FORMUL 11 HOH *324(H2 O) HELIX 1 AA1 SER A 5 GLU A 25 1 21 HELIX 2 AA2 ASP A 38 PHE A 59 1 22 HELIX 3 AA3 PHE A 59 LEU A 70 1 12 HELIX 4 AA4 THR A 76 THR A 91 1 16 HELIX 5 AA5 ASN A 94 ASN A 115 1 22 HELIX 6 AA6 MET A 117 GLU A 119 5 3 HELIX 7 AA7 TYR A 120 LEU A 136 1 17 HELIX 8 AA8 LEU A 136 ASN A 143 1 8 HELIX 9 AA9 ARG A 144 PHE A 153 1 10 HELIX 10 AB1 SER B 3 ASN B 25 1 23 HELIX 11 AB2 GLN C 6 GLU C 25 1 20 HELIX 12 AB3 ASP C 38 PHE C 59 1 22 HELIX 13 AB4 PHE C 59 LEU C 70 1 12 HELIX 14 AB5 THR C 76 THR C 91 1 16 HELIX 15 AB6 ASN C 94 ASN C 115 1 22 HELIX 16 AB7 MET C 117 GLU C 119 5 3 HELIX 17 AB8 TYR C 120 LEU C 136 1 17 HELIX 18 AB9 LEU C 136 ASN C 143 1 8 HELIX 19 AC1 ARG C 144 PHE C 153 1 10 HELIX 20 AC2 PRO D 4 VAL D 21 1 18 SITE 1 AC1 6 ASP A 29 LYS A 113 PRO A 118 VAL A 121 SITE 2 AC1 6 LYS A 122 HOH A 362 SITE 1 AC2 10 GLU A 25 GLY A 26 LEU A 27 TYR A 78 SITE 2 AC2 10 ARG A 114 ARG A 130 HOH A 314 HOH A 324 SITE 3 AC2 10 HOH A 378 SER D 18 SITE 1 AC3 12 ASP A 74 GLY A 116 MET A 117 GLU A 119 SITE 2 AC3 12 HOH A 303 HOH A 306 HOH A 309 HOH A 360 SITE 3 AC3 12 HOH A 377 HOH A 387 HOH A 398 TRP C 139 SITE 1 AC4 12 SER B 18 GLU C 25 GLY C 26 LEU C 27 SITE 2 AC4 12 TYR C 78 ARG C 114 ARG C 130 EDO C 203 SITE 3 AC4 12 HOH C 320 HOH C 338 HOH C 405 HOH C 421 SITE 1 AC5 5 HIS B 11 GLN B 14 LEU B 15 ASP C 29 SITE 2 AC5 5 GLY C 30 SITE 1 AC6 5 GLY C 26 THR C 134 LYS C 135 TAR C 201 SITE 2 AC6 5 HOH C 338 CRYST1 34.297 40.859 56.721 97.30 90.09 101.09 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029157 0.005714 0.000791 0.00000 SCALE2 0.000000 0.024940 0.003264 0.00000 SCALE3 0.000000 0.000000 0.017781 0.00000