HEADER PROTEIN BINDING 14-APR-20 6YO8 TITLE BINARY COMPLEX OF 14-3-3 ZETA WITH GLUCOCORTICOID RECEPTOR (GR) PT524 TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN ZETA/DELTA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: PROTEIN KINASE C INHIBITOR PROTEIN 1,KCIP-1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GLUCOCORTICOID RECEPTOR; COMPND 8 CHAIN: E, F, G, H; COMPND 9 SYNONYM: GR,NUCLEAR RECEPTOR SUBFAMILY 3 GROUP C MEMBER 1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YWHAZ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEX HTB; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS 14-3-3 PROTEIN ZETA/DELTA, GLUCOCORTICOID RECEPTOR, PROTEIN-PEPTIDE KEYWDS 2 COMPLEX, PROTEIN-PROTEIN INTERACTION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.C.MUNIER,K.EDMAN,M.W.D.PERRY,C.OTTMANN REVDAT 4 24-JAN-24 6YO8 1 REMARK REVDAT 3 21-JUL-21 6YO8 1 JRNL REVDAT 2 07-APR-21 6YO8 1 JRNL REVDAT 1 24-MAR-21 6YO8 0 JRNL AUTH C.C.MUNIER,L.DE MARIA,K.EDMAN,A.GUNNARSSON,M.LONGO, JRNL AUTH 2 C.MACKINTOSH,S.PATEL,A.SNIJDER,L.WISSLER,L.BRUNSVELD, JRNL AUTH 3 C.OTTMANN,M.W.D.PERRY JRNL TITL GLUCOCORTICOID RECEPTOR THR524 PHOSPHORYLATION BY MINK1 JRNL TITL 2 INDUCES INTERACTIONS WITH 14-3-3 PROTEIN REGULATORS. JRNL REF J.BIOL.CHEM. V. 296 00551 2021 JRNL REFN ESSN 1083-351X JRNL PMID 33744286 JRNL DOI 10.1016/J.JBC.2021.100551 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 76616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3841 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.10 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.22 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1533 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2292 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1450 REMARK 3 BIN R VALUE (WORKING SET) : 0.2291 REMARK 3 BIN FREE R VALUE : 0.2308 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.41 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 83 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7685 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 60.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.25730 REMARK 3 B22 (A**2) : 9.33560 REMARK 3 B33 (A**2) : -8.07840 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 6.03670 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.360 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.193 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.158 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.198 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.161 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7801 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 10522 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2860 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1333 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7801 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1024 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 9310 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 BOND ANGLES (DEGREES) : 1.19 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.72 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.75 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -23.7219 42.6219 31.1618 REMARK 3 T TENSOR REMARK 3 T11: -0.6902 T22: -0.6874 REMARK 3 T33: -0.5934 T12: 0.0124 REMARK 3 T13: -0.0581 T23: 0.0560 REMARK 3 L TENSOR REMARK 3 L11: 1.7374 L22: 4.2082 REMARK 3 L33: 1.6960 L12: 0.9704 REMARK 3 L13: -0.1166 L23: 0.8673 REMARK 3 S TENSOR REMARK 3 S11: -0.1484 S12: 0.1659 S13: 0.2705 REMARK 3 S21: -0.6086 S22: 0.0099 S23: 0.2555 REMARK 3 S31: -0.0789 S32: 0.0523 S33: 0.1385 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -26.9126 5.5056 42.0244 REMARK 3 T TENSOR REMARK 3 T11: -0.6744 T22: -0.6899 REMARK 3 T33: -0.6555 T12: -0.0350 REMARK 3 T13: 0.0416 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.8129 L22: 3.7837 REMARK 3 L33: 1.2633 L12: -1.1950 REMARK 3 L13: 0.0187 L23: 0.1498 REMARK 3 S TENSOR REMARK 3 S11: 0.0294 S12: -0.2459 S13: -0.1206 REMARK 3 S21: 0.2398 S22: 0.0494 S23: 0.3752 REMARK 3 S31: 0.1951 S32: 0.0079 S33: -0.0788 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -51.3216 27.3300 -13.5562 REMARK 3 T TENSOR REMARK 3 T11: -0.7851 T22: -0.6671 REMARK 3 T33: -0.8203 T12: -0.0672 REMARK 3 T13: -0.0015 T23: 0.0431 REMARK 3 L TENSOR REMARK 3 L11: 1.5020 L22: 2.5709 REMARK 3 L33: 4.5155 L12: -0.1429 REMARK 3 L13: 0.6059 L23: -1.3105 REMARK 3 S TENSOR REMARK 3 S11: 0.0350 S12: 0.0744 S13: 0.0718 REMARK 3 S21: -0.0855 S22: -0.2337 S23: -0.1752 REMARK 3 S31: -0.0485 S32: 0.7483 S33: 0.1987 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -60.3734 19.0027 23.1938 REMARK 3 T TENSOR REMARK 3 T11: -0.7771 T22: -0.6894 REMARK 3 T33: -0.7941 T12: 0.0529 REMARK 3 T13: -0.0855 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 1.9815 L22: 2.3212 REMARK 3 L33: 4.9878 L12: 0.0970 REMARK 3 L13: -0.8153 L23: 0.8745 REMARK 3 S TENSOR REMARK 3 S11: -0.1722 S12: -0.2540 S13: -0.0397 REMARK 3 S21: 0.0684 S22: 0.0727 S23: 0.1169 REMARK 3 S31: 0.1295 S32: 0.3930 S33: 0.0995 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YO8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9159 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77152 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.086 REMARK 200 RESOLUTION RANGE LOW (A) : 84.474 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2O02 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.29 M MGCL2, 22.5% PEG 3350, 0.1 M REMARK 280 TRIS PH 8.3, SUPPLEMENTED WITH 10% OF AN ADDITIVE BUFFER REMARK 280 CONTAINING 40% V/V OF 2,5-HEXANEDIOL, EVAPORATION, TEMPERATURE REMARK 280 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 79.32550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.94000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 79.32550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 49.94000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 323 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 ALA A -3 REMARK 465 MET A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY B -4 REMARK 465 ALA B -3 REMARK 465 MET B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 GLY C -4 REMARK 465 ALA C -3 REMARK 465 MET C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 ALA C 72 REMARK 465 GLU C 73 REMARK 465 LYS C 74 REMARK 465 LYS C 75 REMARK 465 GLN C 76 REMARK 465 GLY D -4 REMARK 465 ALA D -3 REMARK 465 MET D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 LYS E 518 REMARK 465 LYS F 518 REMARK 465 LYS G 518 REMARK 465 THR G 519 REMARK 465 LYS H 518 REMARK 465 THR H 519 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 18 78.55 -105.41 REMARK 500 ARG B 18 72.34 -101.46 REMARK 500 PHE B 104 -35.48 -136.60 REMARK 500 ASN C 4 -15.94 70.55 REMARK 500 THR D 69 104.21 -48.07 REMARK 500 PHE D 104 -55.91 -122.06 REMARK 500 GLU D 208 -57.89 72.43 REMARK 500 VAL E 521 -137.70 38.10 REMARK 500 THR F 529 -63.12 -29.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ASN B 42 -13.32 REMARK 500 REMARK 500 REMARK: NULL DBREF 6YO8 A 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 6YO8 B 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 6YO8 C 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 6YO8 D 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 6YO8 E 518 530 UNP P04150 GCR_HUMAN 518 530 DBREF 6YO8 F 518 530 UNP P04150 GCR_HUMAN 518 530 DBREF 6YO8 G 518 530 UNP P04150 GCR_HUMAN 518 530 DBREF 6YO8 H 518 530 UNP P04150 GCR_HUMAN 518 530 SEQADV 6YO8 GLY A -4 UNP P63104 EXPRESSION TAG SEQADV 6YO8 ALA A -3 UNP P63104 EXPRESSION TAG SEQADV 6YO8 MET A -2 UNP P63104 EXPRESSION TAG SEQADV 6YO8 GLY A -1 UNP P63104 EXPRESSION TAG SEQADV 6YO8 SER A 0 UNP P63104 EXPRESSION TAG SEQADV 6YO8 GLY B -4 UNP P63104 EXPRESSION TAG SEQADV 6YO8 ALA B -3 UNP P63104 EXPRESSION TAG SEQADV 6YO8 MET B -2 UNP P63104 EXPRESSION TAG SEQADV 6YO8 GLY B -1 UNP P63104 EXPRESSION TAG SEQADV 6YO8 SER B 0 UNP P63104 EXPRESSION TAG SEQADV 6YO8 GLY C -4 UNP P63104 EXPRESSION TAG SEQADV 6YO8 ALA C -3 UNP P63104 EXPRESSION TAG SEQADV 6YO8 MET C -2 UNP P63104 EXPRESSION TAG SEQADV 6YO8 GLY C -1 UNP P63104 EXPRESSION TAG SEQADV 6YO8 SER C 0 UNP P63104 EXPRESSION TAG SEQADV 6YO8 GLY D -4 UNP P63104 EXPRESSION TAG SEQADV 6YO8 ALA D -3 UNP P63104 EXPRESSION TAG SEQADV 6YO8 MET D -2 UNP P63104 EXPRESSION TAG SEQADV 6YO8 GLY D -1 UNP P63104 EXPRESSION TAG SEQADV 6YO8 SER D 0 UNP P63104 EXPRESSION TAG SEQRES 1 A 235 GLY ALA MET GLY SER MET ASP LYS ASN GLU LEU VAL GLN SEQRES 2 A 235 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP ASP SEQRES 3 A 235 MET ALA ALA CYS MET LYS SER VAL THR GLU GLN GLY ALA SEQRES 4 A 235 GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 A 235 TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP ARG SEQRES 6 A 235 VAL VAL SER SER ILE GLU GLN LYS THR GLU GLY ALA GLU SEQRES 7 A 235 LYS LYS GLN GLN MET ALA ARG GLU TYR ARG GLU LYS ILE SEQRES 8 A 235 GLU THR GLU LEU ARG ASP ILE CYS ASN ASP VAL LEU SER SEQRES 9 A 235 LEU LEU GLU LYS PHE LEU ILE PRO ASN ALA SER GLN ALA SEQRES 10 A 235 GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP TYR SEQRES 11 A 235 TYR ARG TYR LEU ALA GLU VAL ALA ALA GLY ASP ASP LYS SEQRES 12 A 235 LYS GLY ILE VAL ASP GLN SER GLN GLN ALA TYR GLN GLU SEQRES 13 A 235 ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR HIS SEQRES 14 A 235 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 A 235 TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SER SEQRES 16 A 235 LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU LEU SEQRES 17 A 235 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 A 235 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 A 235 SER SEQRES 1 B 235 GLY ALA MET GLY SER MET ASP LYS ASN GLU LEU VAL GLN SEQRES 2 B 235 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP ASP SEQRES 3 B 235 MET ALA ALA CYS MET LYS SER VAL THR GLU GLN GLY ALA SEQRES 4 B 235 GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 B 235 TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP ARG SEQRES 6 B 235 VAL VAL SER SER ILE GLU GLN LYS THR GLU GLY ALA GLU SEQRES 7 B 235 LYS LYS GLN GLN MET ALA ARG GLU TYR ARG GLU LYS ILE SEQRES 8 B 235 GLU THR GLU LEU ARG ASP ILE CYS ASN ASP VAL LEU SER SEQRES 9 B 235 LEU LEU GLU LYS PHE LEU ILE PRO ASN ALA SER GLN ALA SEQRES 10 B 235 GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP TYR SEQRES 11 B 235 TYR ARG TYR LEU ALA GLU VAL ALA ALA GLY ASP ASP LYS SEQRES 12 B 235 LYS GLY ILE VAL ASP GLN SER GLN GLN ALA TYR GLN GLU SEQRES 13 B 235 ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR HIS SEQRES 14 B 235 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 B 235 TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SER SEQRES 16 B 235 LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU LEU SEQRES 17 B 235 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 B 235 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 B 235 SER SEQRES 1 C 235 GLY ALA MET GLY SER MET ASP LYS ASN GLU LEU VAL GLN SEQRES 2 C 235 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP ASP SEQRES 3 C 235 MET ALA ALA CYS MET LYS SER VAL THR GLU GLN GLY ALA SEQRES 4 C 235 GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 C 235 TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP ARG SEQRES 6 C 235 VAL VAL SER SER ILE GLU GLN LYS THR GLU GLY ALA GLU SEQRES 7 C 235 LYS LYS GLN GLN MET ALA ARG GLU TYR ARG GLU LYS ILE SEQRES 8 C 235 GLU THR GLU LEU ARG ASP ILE CYS ASN ASP VAL LEU SER SEQRES 9 C 235 LEU LEU GLU LYS PHE LEU ILE PRO ASN ALA SER GLN ALA SEQRES 10 C 235 GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP TYR SEQRES 11 C 235 TYR ARG TYR LEU ALA GLU VAL ALA ALA GLY ASP ASP LYS SEQRES 12 C 235 LYS GLY ILE VAL ASP GLN SER GLN GLN ALA TYR GLN GLU SEQRES 13 C 235 ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR HIS SEQRES 14 C 235 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 C 235 TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SER SEQRES 16 C 235 LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU LEU SEQRES 17 C 235 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 C 235 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 C 235 SER SEQRES 1 D 235 GLY ALA MET GLY SER MET ASP LYS ASN GLU LEU VAL GLN SEQRES 2 D 235 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP ASP SEQRES 3 D 235 MET ALA ALA CYS MET LYS SER VAL THR GLU GLN GLY ALA SEQRES 4 D 235 GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 D 235 TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP ARG SEQRES 6 D 235 VAL VAL SER SER ILE GLU GLN LYS THR GLU GLY ALA GLU SEQRES 7 D 235 LYS LYS GLN GLN MET ALA ARG GLU TYR ARG GLU LYS ILE SEQRES 8 D 235 GLU THR GLU LEU ARG ASP ILE CYS ASN ASP VAL LEU SER SEQRES 9 D 235 LEU LEU GLU LYS PHE LEU ILE PRO ASN ALA SER GLN ALA SEQRES 10 D 235 GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP TYR SEQRES 11 D 235 TYR ARG TYR LEU ALA GLU VAL ALA ALA GLY ASP ASP LYS SEQRES 12 D 235 LYS GLY ILE VAL ASP GLN SER GLN GLN ALA TYR GLN GLU SEQRES 13 D 235 ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR HIS SEQRES 14 D 235 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 D 235 TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SER SEQRES 16 D 235 LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU LEU SEQRES 17 D 235 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 D 235 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 D 235 SER SEQRES 1 E 13 LYS THR ILE VAL PRO ALA TPO LEU PRO GLN LEU THR PRO SEQRES 1 F 13 LYS THR ILE VAL PRO ALA TPO LEU PRO GLN LEU THR PRO SEQRES 1 G 13 LYS THR ILE VAL PRO ALA TPO LEU PRO GLN LEU THR PRO SEQRES 1 H 13 LYS THR ILE VAL PRO ALA TPO LEU PRO GLN LEU THR PRO MODRES 6YO8 TPO E 524 THR MODIFIED RESIDUE MODRES 6YO8 TPO F 524 THR MODIFIED RESIDUE MODRES 6YO8 TPO G 524 THR MODIFIED RESIDUE MODRES 6YO8 TPO H 524 THR MODIFIED RESIDUE HET TPO E 524 11 HET TPO F 524 11 HET TPO G 524 11 HET TPO H 524 11 HETNAM TPO PHOSPHOTHREONINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 5 TPO 4(C4 H10 N O6 P) FORMUL 9 HOH *240(H2 O) HELIX 1 AA1 ASP A 2 GLU A 17 1 16 HELIX 2 AA2 ARG A 18 GLN A 32 1 15 HELIX 3 AA3 SER A 37 THR A 69 1 33 HELIX 4 AA4 ALA A 72 PHE A 104 1 33 HELIX 5 AA5 GLN A 111 VAL A 132 1 22 HELIX 6 AA6 ASP A 137 MET A 160 1 24 HELIX 7 AA7 HIS A 164 ILE A 181 1 18 HELIX 8 AA8 SER A 184 GLU A 202 1 19 HELIX 9 AA9 LEU A 203 LEU A 206 5 4 HELIX 10 AB1 SER A 207 SER A 230 1 24 HELIX 11 AB2 ASP B 2 GLU B 17 1 16 HELIX 12 AB3 ARG B 18 GLN B 32 1 15 HELIX 13 AB4 SER B 37 THR B 69 1 33 HELIX 14 AB5 ALA B 72 PHE B 104 1 33 HELIX 15 AB6 PHE B 104 ALA B 109 1 6 HELIX 16 AB7 GLN B 111 VAL B 132 1 22 HELIX 17 AB8 ALA B 134 MET B 160 1 27 HELIX 18 AB9 HIS B 164 ILE B 181 1 18 HELIX 19 AC1 SER B 184 GLU B 202 1 19 HELIX 20 AC2 LEU B 203 LEU B 206 5 4 HELIX 21 AC3 SER B 207 SER B 230 1 24 HELIX 22 AC4 ASN C 4 ALA C 16 1 13 HELIX 23 AC5 ARG C 18 GLU C 31 1 14 HELIX 24 AC6 SER C 37 THR C 69 1 33 HELIX 25 AC7 MET C 78 PHE C 104 1 27 HELIX 26 AC8 GLN C 111 VAL C 132 1 22 HELIX 27 AC9 ASP C 137 MET C 160 1 24 HELIX 28 AD1 HIS C 164 ILE C 181 1 18 HELIX 29 AD2 SER C 184 GLU C 202 1 19 HELIX 30 AD3 LEU C 203 LEU C 206 5 4 HELIX 31 AD4 SER C 207 SER C 230 1 24 HELIX 32 AD5 ASP D 2 ALA D 16 1 15 HELIX 33 AD6 ARG D 18 GLN D 32 1 15 HELIX 34 AD7 SER D 37 THR D 69 1 33 HELIX 35 AD8 ALA D 72 PHE D 104 1 33 HELIX 36 AD9 GLN D 111 VAL D 132 1 22 HELIX 37 AE1 ALA D 134 MET D 160 1 27 HELIX 38 AE2 HIS D 164 ILE D 181 1 18 HELIX 39 AE3 SER D 184 GLU D 202 1 19 HELIX 40 AE4 LEU D 203 LEU D 206 5 4 HELIX 41 AE5 GLU D 208 SER D 230 1 23 LINK C ALA E 523 N TPO E 524 1555 1555 1.34 LINK C TPO E 524 N LEU E 525 1555 1555 1.34 LINK C ALA F 523 N TPO F 524 1555 1555 1.35 LINK C TPO F 524 N LEU F 525 1555 1555 1.35 LINK C ALA G 523 N TPO G 524 1555 1555 1.34 LINK C TPO G 524 N LEU G 525 1555 1555 1.33 LINK C ALA H 523 N TPO H 524 1555 1555 1.33 LINK C TPO H 524 N LEU H 525 1555 1555 1.34 CISPEP 1 VAL E 521 PRO E 522 0 -3.12 CISPEP 2 LEU E 525 PRO E 526 0 -4.14 CISPEP 3 LEU F 525 PRO F 526 0 -1.29 CISPEP 4 THR F 529 PRO F 530 0 -1.17 CISPEP 5 LEU G 525 PRO G 526 0 -2.34 CISPEP 6 LEU H 525 PRO H 526 0 -1.13 CISPEP 7 LEU H 528 THR H 529 0 10.84 CRYST1 158.651 99.880 84.812 90.00 93.73 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006303 0.000000 0.000411 0.00000 SCALE2 0.000000 0.010012 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011816 0.00000