HEADER TRANSFERASE 15-APR-20 6YOT TITLE CRYSTAL STRUCTURE OF THE CAMP-DEPENDENT PROTEIN KINASE A TITLE 2 COCRYSTALLIZED WITH N,N-DIMETHYLISOQUINOLINE-5-SULFONAMIDE AND PKI TITLE 3 (5-24) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PKA C-ALPHA; COMPND 5 EC: 2.7.11.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: PKI-ALPHA,CAMP-DEPENDENT PROTEIN KINASE INHIBITOR, COMPND 11 MUSCLE/BRAIN ISOFORM; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRICETULUS GRISEUS; SOURCE 3 ORGANISM_COMMON: CHINESE HAMSTER; SOURCE 4 ORGANISM_TAXID: 10029; SOURCE 5 GENE: PRKACA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 12 ORGANISM_TAXID: 10090 KEYWDS PHOSPHOTRANSFERASE, SIGNALLING PATHWAYS, GLYCOGEN METABOLISM, KEYWDS 2 SERINE/THREONINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.OEBBEKE,A.HEINE,G.KLEBE REVDAT 2 24-JAN-24 6YOT 1 REMARK REVDAT 1 28-APR-21 6YOT 0 JRNL AUTH M.OEBBEKE,B.WIENEN-SCHMIDT,H.-D.GERBER,A.HEINE,G.KLEBE JRNL TITL FRAGMENT BASED DRUG DESIGN - SMALL CHEMICAL CHANGES OF JRNL TITL 2 FRAGMENTS EFFECTING BIG CHANGES IN BINDING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 32668 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.2300 - 4.4900 0.98 2744 145 0.1749 0.1660 REMARK 3 2 4.4900 - 3.5600 0.98 2641 139 0.1610 0.1836 REMARK 3 3 3.5600 - 3.1100 0.98 2598 137 0.1905 0.2019 REMARK 3 4 3.1100 - 2.8300 0.99 2591 136 0.2045 0.2396 REMARK 3 5 2.8300 - 2.6200 0.99 2585 136 0.2074 0.2168 REMARK 3 6 2.6200 - 2.4700 1.00 2625 138 0.2026 0.2646 REMARK 3 7 2.4700 - 2.3500 0.99 2568 135 0.1996 0.2483 REMARK 3 8 2.3500 - 2.2400 1.00 2597 137 0.2030 0.2583 REMARK 3 9 2.2400 - 2.1600 0.99 2556 135 0.2000 0.2399 REMARK 3 10 2.1600 - 2.0800 0.99 2586 136 0.2105 0.2674 REMARK 3 11 2.0800 - 2.0200 1.00 2578 135 0.2351 0.2638 REMARK 3 12 2.0200 - 1.9600 0.91 2365 125 0.2749 0.3093 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.239 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.842 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3051 REMARK 3 ANGLE : 0.836 4158 REMARK 3 CHIRALITY : 0.051 445 REMARK 3 PLANARITY : 0.005 565 REMARK 3 DIHEDRAL : 18.354 1086 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1259 -15.5268 -21.0255 REMARK 3 T TENSOR REMARK 3 T11: 0.2585 T22: 0.3078 REMARK 3 T33: 0.3541 T12: -0.0298 REMARK 3 T13: -0.0061 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 1.6763 L22: 1.7787 REMARK 3 L33: 2.9960 L12: -0.1324 REMARK 3 L13: -0.8545 L23: 0.6701 REMARK 3 S TENSOR REMARK 3 S11: 0.1696 S12: 0.0823 S13: 0.0798 REMARK 3 S21: -0.3778 S22: 0.0546 S23: -0.2629 REMARK 3 S31: -0.2385 S32: 0.1268 S33: -0.2271 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5661 -24.1519 -17.6784 REMARK 3 T TENSOR REMARK 3 T11: 0.2011 T22: 0.1981 REMARK 3 T33: 0.2001 T12: 0.0219 REMARK 3 T13: 0.0137 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.0417 L22: 1.5687 REMARK 3 L33: 1.1326 L12: 0.0646 REMARK 3 L13: 0.0771 L23: 0.3567 REMARK 3 S TENSOR REMARK 3 S11: 0.0358 S12: 0.0374 S13: -0.1463 REMARK 3 S21: -0.1169 S22: -0.0177 S23: -0.1162 REMARK 3 S31: 0.0653 S32: 0.0745 S33: -0.0166 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 316 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6368 -17.7951 -15.9814 REMARK 3 T TENSOR REMARK 3 T11: 0.1918 T22: 0.1487 REMARK 3 T33: 0.1787 T12: 0.0257 REMARK 3 T13: 0.0125 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 2.0502 L22: 1.7358 REMARK 3 L33: 2.1636 L12: 0.0528 REMARK 3 L13: 0.0039 L23: -0.2833 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: -0.0215 S13: 0.0704 REMARK 3 S21: -0.0343 S22: -0.0305 S23: 0.0766 REMARK 3 S31: -0.1017 S32: -0.0747 S33: 0.0116 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 317 THROUGH 350 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4175 -24.2261 -32.7526 REMARK 3 T TENSOR REMARK 3 T11: 0.3768 T22: 0.3829 REMARK 3 T33: 0.3783 T12: -0.0244 REMARK 3 T13: -0.0309 T23: -0.0479 REMARK 3 L TENSOR REMARK 3 L11: 2.3764 L22: 5.8123 REMARK 3 L33: 1.6824 L12: -0.8667 REMARK 3 L13: -0.6653 L23: -0.4014 REMARK 3 S TENSOR REMARK 3 S11: 0.0710 S12: 0.4813 S13: -0.1054 REMARK 3 S21: -1.0265 S22: -0.0440 S23: 0.1947 REMARK 3 S31: 0.1638 S32: 0.0889 S33: -0.0170 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0342 -34.0733 -26.1060 REMARK 3 T TENSOR REMARK 3 T11: 0.3762 T22: 0.3504 REMARK 3 T33: 0.3390 T12: -0.0279 REMARK 3 T13: 0.0043 T23: -0.1096 REMARK 3 L TENSOR REMARK 3 L11: 4.4100 L22: 5.3416 REMARK 3 L33: 3.6313 L12: 2.7599 REMARK 3 L13: 0.2011 L23: -2.1394 REMARK 3 S TENSOR REMARK 3 S11: 0.2495 S12: -0.1618 S13: 0.1866 REMARK 3 S21: -0.0794 S22: -0.1705 S23: 0.3445 REMARK 3 S31: 0.3418 S32: 0.1328 S33: -0.0551 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4972 -25.0899 -31.3870 REMARK 3 T TENSOR REMARK 3 T11: 0.3031 T22: 0.2451 REMARK 3 T33: 0.1355 T12: 0.0166 REMARK 3 T13: -0.0184 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 8.3647 L22: 4.8292 REMARK 3 L33: 3.7332 L12: 0.2979 REMARK 3 L13: 0.9709 L23: 2.2402 REMARK 3 S TENSOR REMARK 3 S11: 0.1863 S12: 0.7454 S13: -0.0441 REMARK 3 S21: -0.3854 S22: -0.0547 S23: -0.0337 REMARK 3 S31: 0.0068 S32: 0.0900 S33: -0.1375 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6YOT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-APR-20. REMARK 100 THE DEPOSITION ID IS D_1292107982. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91840 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32669 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 45.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 13.9200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.51400 REMARK 200 FOR SHELL : 2.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6F14 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0,2 MM PKA IN 100 MM MES-BIS-TRIS REMARK 280 -BUFFER, 1 MM DITHIOTHREITOL, 0.1 MM SODIUM EDTA, 75 MM LICL, REMARK 280 0.2 MM MEGA 8, 0.5 MM PKI, 15 MM N,N-DIMETHYLISOQUINOLINE-5- REMARK 280 SULFONAMIDE IN DMSO AND 18-23 % METHANOL (V/V) 0.004 ML DROP REMARK 280 VOLUME, 0.5 ML RESERVOIR VOLUME, PH 6.9, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.91550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.75300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.28900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.75300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.91550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.28900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP B 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 2 CG OD1 ND2 REMARK 470 LYS A 7 NZ REMARK 470 LYS A 8 CD CE NZ REMARK 470 SER A 14 OG REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 GLU A 25 OE1 OE2 REMARK 470 LYS A 28 CD CE NZ REMARK 470 LYS A 29 CE NZ REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 SER A 32 OG REMARK 470 SER A 34 OG REMARK 470 ASN A 36 CG OD1 ND2 REMARK 470 LEU A 40 CD1 CD2 REMARK 470 ARG A 45 CD NE CZ NH1 NH2 REMARK 470 LYS A 47 CD CE NZ REMARK 470 SER A 53 OG REMARK 470 PHE A 54 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 56 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 61 NZ REMARK 470 LYS A 78 CD CE NZ REMARK 470 LYS A 81 CG CD CE NZ REMARK 470 LEU A 82 CG CD1 CD2 REMARK 470 LYS A 83 CG CD CE NZ REMARK 470 GLN A 96 OE1 NE2 REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 SER A 114 OG REMARK 470 GLN A 176 CD OE1 NE2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 LYS A 213 NZ REMARK 470 LYS A 217 CD CE NZ REMARK 470 ILE A 244 CD1 REMARK 470 GLN A 245 NE2 REMARK 470 LYS A 254 CD CE NZ REMARK 470 ARG A 256 CD NE CZ NH1 NH2 REMARK 470 LYS A 279 CE NZ REMARK 470 LYS A 285 CD CE NZ REMARK 470 LYS A 295 CD CE NZ REMARK 470 GLU A 311 CG CD OE1 OE2 REMARK 470 ILE A 315 CD1 REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 PHE A 318 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 319 CG CD CE NZ REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 GLU A 334 CG CD OE1 OE2 REMARK 470 ILE A 335 CG1 CG2 CD1 REMARK 470 ARG A 336 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 337 CG1 CG2 REMARK 470 ILE A 339 CG1 CG2 CD1 REMARK 470 ASN A 340 CG OD1 ND2 REMARK 470 LYS A 342 CG CD CE NZ REMARK 470 LYS A 345 CG CD CE NZ REMARK 470 ILE B 22 CD1 REMARK 470 HIS B 23 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 184 96.51 76.50 REMARK 500 ARG B 15 46.83 -102.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P4W A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue P4W A 402 DBREF 6YOT A 0 350 UNP P25321 KAPCA_CRIGR 1 351 DBREF 6YOT B 5 24 UNP P63248 IPKA_MOUSE 6 25 SEQADV 6YOT GLY A -2 UNP P25321 EXPRESSION TAG SEQADV 6YOT HIS A -1 UNP P25321 EXPRESSION TAG SEQRES 1 A 353 GLY HIS MET GLY ASN ALA ALA ALA ALA LYS LYS GLY SEP SEQRES 2 A 353 GLU GLN GLU SER VAL LYS GLU PHE LEU ALA LYS ALA LYS SEQRES 3 A 353 GLU GLU PHE LEU LYS LYS TRP GLU SER PRO SER GLN ASN SEQRES 4 A 353 THR ALA GLN LEU ASP HIS PHE ASP ARG ILE LYS THR LEU SEQRES 5 A 353 GLY THR GLY SER PHE GLY ARG VAL MET LEU VAL LYS HIS SEQRES 6 A 353 LYS GLU THR GLY ASN HIS TYR ALA MET LYS ILE LEU ASP SEQRES 7 A 353 LYS GLN LYS VAL VAL LYS LEU LYS GLN ILE GLU HIS THR SEQRES 8 A 353 LEU ASN GLU LYS ARG ILE LEU GLN ALA VAL ASN PHE PRO SEQRES 9 A 353 PHE LEU VAL LYS LEU GLU PHE SER PHE LYS ASP ASN SER SEQRES 10 A 353 ASN LEU TYR MET VAL MET GLU TYR VAL PRO GLY GLY GLU SEQRES 11 A 353 MET PHE SER HIS LEU ARG ARG ILE GLY ARG PHE SER GLU SEQRES 12 A 353 PRO HIS ALA ARG PHE TYR ALA ALA GLN ILE VAL LEU THR SEQRES 13 A 353 PHE GLU TYR LEU HIS SER LEU ASP LEU ILE TYR ARG ASP SEQRES 14 A 353 LEU LYS PRO GLU ASN LEU LEU ILE ASP GLN GLN GLY TYR SEQRES 15 A 353 ILE GLN VAL THR ASP PHE GLY PHE ALA LYS ARG VAL LYS SEQRES 16 A 353 GLY ARG THR TRP TPO LEU CYS GLY THR PRO GLU TYR LEU SEQRES 17 A 353 ALA PRO GLU ILE ILE LEU SER LYS GLY TYR ASN LYS ALA SEQRES 18 A 353 VAL ASP TRP TRP ALA LEU GLY VAL LEU ILE TYR GLU MET SEQRES 19 A 353 ALA ALA GLY TYR PRO PRO PHE PHE ALA ASP GLN PRO ILE SEQRES 20 A 353 GLN ILE TYR GLU LYS ILE VAL SER GLY LYS VAL ARG PHE SEQRES 21 A 353 PRO SER HIS PHE SER SER ASP LEU LYS ASP LEU LEU ARG SEQRES 22 A 353 ASN LEU LEU GLN VAL ASP LEU THR LYS ARG PHE GLY ASN SEQRES 23 A 353 LEU LYS ASN GLY VAL ASN ASP ILE LYS ASN HIS LYS TRP SEQRES 24 A 353 PHE ALA THR THR ASP TRP ILE ALA ILE TYR GLN ARG LYS SEQRES 25 A 353 VAL GLU ALA PRO PHE ILE PRO LYS PHE LYS GLY PRO GLY SEQRES 26 A 353 ASP THR SER ASN PHE ASP ASP TYR GLU GLU GLU GLU ILE SEQRES 27 A 353 ARG VAL SEP ILE ASN GLU LYS CYS GLY LYS GLU PHE THR SEQRES 28 A 353 GLU PHE SEQRES 1 B 20 THR THR TYR ALA ASP PHE ILE ALA SER GLY ARG THR GLY SEQRES 2 B 20 ARG ARG ASN ALA ILE HIS ASP MODRES 6YOT SEP A 10 SER MODIFIED RESIDUE MODRES 6YOT TPO A 197 THR MODIFIED RESIDUE MODRES 6YOT SEP A 338 SER MODIFIED RESIDUE HET SEP A 10 10 HET TPO A 197 11 HET SEP A 338 10 HET P4W A 401 16 HET P4W A 402 16 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM P4W ~{N},~{N}-DIMETHYLISOQUINOLINE-5-SULFONAMIDE HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 1 TPO C4 H10 N O6 P FORMUL 3 P4W 2(C11 H12 N2 O2 S) FORMUL 5 HOH *187(H2 O) HELIX 1 AA1 GLY A 1 SER A 32 1 32 HELIX 2 AA2 GLN A 39 ASP A 41 5 3 HELIX 3 AA3 LYS A 76 LEU A 82 1 7 HELIX 4 AA4 GLN A 84 VAL A 98 1 15 HELIX 5 AA5 GLU A 127 GLY A 136 1 10 HELIX 6 AA6 SER A 139 LEU A 160 1 22 HELIX 7 AA7 LYS A 168 GLU A 170 5 3 HELIX 8 AA8 THR A 201 LEU A 205 5 5 HELIX 9 AA9 ALA A 206 LEU A 211 1 6 HELIX 10 AB1 LYS A 217 GLY A 234 1 18 HELIX 11 AB2 GLN A 242 SER A 252 1 11 HELIX 12 AB3 SER A 262 LEU A 273 1 12 HELIX 13 AB4 VAL A 288 ASN A 293 1 6 HELIX 14 AB5 HIS A 294 ALA A 298 5 5 HELIX 15 AB6 ASP A 301 GLN A 307 1 7 HELIX 16 AB7 THR B 6 SER B 13 1 8 SHEET 1 AA1 5 PHE A 43 THR A 51 0 SHEET 2 AA1 5 GLY A 55 HIS A 62 -1 O VAL A 57 N LEU A 49 SHEET 3 AA1 5 HIS A 68 ASP A 75 -1 O ILE A 73 N ARG A 56 SHEET 4 AA1 5 ASN A 115 GLU A 121 -1 O MET A 120 N ALA A 70 SHEET 5 AA1 5 LEU A 106 LYS A 111 -1 N GLU A 107 O VAL A 119 SHEET 1 AA2 2 LEU A 162 ILE A 163 0 SHEET 2 AA2 2 LYS A 189 ARG A 190 -1 O LYS A 189 N ILE A 163 SHEET 1 AA3 2 LEU A 172 ILE A 174 0 SHEET 2 AA3 2 ILE A 180 VAL A 182 -1 O GLN A 181 N LEU A 173 LINK C GLY A 9 N SEP A 10 1555 1555 1.33 LINK C SEP A 10 N GLU A 11 1555 1555 1.32 LINK C TRP A 196 N TPO A 197 1555 1555 1.33 LINK C TPO A 197 N LEU A 198 1555 1555 1.33 LINK C VAL A 337 N SEP A 338 1555 1555 1.33 LINK C SEP A 338 N ILE A 339 1555 1555 1.33 SITE 1 AC1 12 LEU A 49 GLY A 50 VAL A 57 ALA A 70 SITE 2 AC1 12 MET A 120 GLU A 121 TYR A 122 VAL A 123 SITE 3 AC1 12 GLU A 127 LEU A 173 THR A 183 PHE A 327 SITE 1 AC2 8 SER A 14 PHE A 18 LEU A 152 GLU A 155 SITE 2 AC2 8 LYS A 292 ILE A 303 TYR A 306 HOH A 590 CRYST1 57.831 72.578 107.506 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017292 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013778 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009302 0.00000