data_6YPK # _entry.id 6YPK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6YPK pdb_00006ypk 10.2210/pdb6ypk/pdb WWPDB D_1292107866 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-07-15 2 'Structure model' 1 1 2020-11-11 3 'Structure model' 1 2 2020-11-25 4 'Structure model' 1 3 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.pdbx_database_id_DOI' 7 2 'Structure model' '_citation.pdbx_database_id_PubMed' 8 2 'Structure model' '_citation.title' 9 2 'Structure model' '_citation.year' 10 2 'Structure model' '_citation_author.identifier_ORCID' 11 3 'Structure model' '_citation.journal_volume' 12 3 'Structure model' '_citation.page_first' 13 3 'Structure model' '_citation.page_last' 14 3 'Structure model' '_citation_author.identifier_ORCID' 15 4 'Structure model' '_database_2.pdbx_DOI' 16 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6YPK _pdbx_database_status.recvd_initial_deposition_date 2020-04-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Brear, P.' 1 0000-0002-4045-0474 'Hyvonen, M.' 2 0000-0001-8683-4070 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 63 _citation.language ? _citation.page_first 12786 _citation.page_last 12798 _citation.title 'Proposed Allosteric Inhibitors Bind to the ATP Site of CK2 alpha.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.0c01173 _citation.pdbx_database_id_PubMed 33119282 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Brear, P.' 1 ? primary 'Ball, D.' 2 ? primary 'Stott, K.' 3 ? primary ;D'Arcy, S. ; 4 ? primary 'Hyvonen, M.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Casein kinase II subunit alpha' 39031.391 1 2.7.11.1 K75A ? ? 2 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 1 ? ? ? ? 3 water nat water 18.015 144 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CK II alpha' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGPVPSRARVYTDVNTHRPSEYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVAAAKIKRE IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH PYFYTVVK ; _entity_poly.pdbx_seq_one_letter_code_can ;SGPVPSRARVYTDVNTHRPSEYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVAAAKIKRE IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH PYFYTVVK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-DIPHOSPHATE" GDP 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 PRO n 1 4 VAL n 1 5 PRO n 1 6 SER n 1 7 ARG n 1 8 ALA n 1 9 ARG n 1 10 VAL n 1 11 TYR n 1 12 THR n 1 13 ASP n 1 14 VAL n 1 15 ASN n 1 16 THR n 1 17 HIS n 1 18 ARG n 1 19 PRO n 1 20 SER n 1 21 GLU n 1 22 TYR n 1 23 TRP n 1 24 ASP n 1 25 TYR n 1 26 GLU n 1 27 SER n 1 28 HIS n 1 29 VAL n 1 30 VAL n 1 31 GLU n 1 32 TRP n 1 33 GLY n 1 34 ASN n 1 35 GLN n 1 36 ASP n 1 37 ASP n 1 38 TYR n 1 39 GLN n 1 40 LEU n 1 41 VAL n 1 42 ARG n 1 43 LYS n 1 44 LEU n 1 45 GLY n 1 46 ARG n 1 47 GLY n 1 48 LYS n 1 49 TYR n 1 50 SER n 1 51 GLU n 1 52 VAL n 1 53 PHE n 1 54 GLU n 1 55 ALA n 1 56 ILE n 1 57 ASN n 1 58 ILE n 1 59 THR n 1 60 ASN n 1 61 ASN n 1 62 GLU n 1 63 LYS n 1 64 VAL n 1 65 VAL n 1 66 VAL n 1 67 LYS n 1 68 ILE n 1 69 LEU n 1 70 LYS n 1 71 PRO n 1 72 VAL n 1 73 ALA n 1 74 ALA n 1 75 ALA n 1 76 LYS n 1 77 ILE n 1 78 LYS n 1 79 ARG n 1 80 GLU n 1 81 ILE n 1 82 LYS n 1 83 ILE n 1 84 LEU n 1 85 GLU n 1 86 ASN n 1 87 LEU n 1 88 ARG n 1 89 GLY n 1 90 GLY n 1 91 PRO n 1 92 ASN n 1 93 ILE n 1 94 ILE n 1 95 THR n 1 96 LEU n 1 97 ALA n 1 98 ASP n 1 99 ILE n 1 100 VAL n 1 101 LYS n 1 102 ASP n 1 103 PRO n 1 104 VAL n 1 105 SER n 1 106 ARG n 1 107 THR n 1 108 PRO n 1 109 ALA n 1 110 LEU n 1 111 VAL n 1 112 PHE n 1 113 GLU n 1 114 HIS n 1 115 VAL n 1 116 ASN n 1 117 ASN n 1 118 THR n 1 119 ASP n 1 120 PHE n 1 121 LYS n 1 122 GLN n 1 123 LEU n 1 124 TYR n 1 125 GLN n 1 126 THR n 1 127 LEU n 1 128 THR n 1 129 ASP n 1 130 TYR n 1 131 ASP n 1 132 ILE n 1 133 ARG n 1 134 PHE n 1 135 TYR n 1 136 MET n 1 137 TYR n 1 138 GLU n 1 139 ILE n 1 140 LEU n 1 141 LYS n 1 142 ALA n 1 143 LEU n 1 144 ASP n 1 145 TYR n 1 146 CYS n 1 147 HIS n 1 148 SER n 1 149 MET n 1 150 GLY n 1 151 ILE n 1 152 MET n 1 153 HIS n 1 154 ARG n 1 155 ASP n 1 156 VAL n 1 157 LYS n 1 158 PRO n 1 159 HIS n 1 160 ASN n 1 161 VAL n 1 162 MET n 1 163 ILE n 1 164 ASP n 1 165 HIS n 1 166 GLU n 1 167 HIS n 1 168 ARG n 1 169 LYS n 1 170 LEU n 1 171 ARG n 1 172 LEU n 1 173 ILE n 1 174 ASP n 1 175 TRP n 1 176 GLY n 1 177 LEU n 1 178 ALA n 1 179 GLU n 1 180 PHE n 1 181 TYR n 1 182 HIS n 1 183 PRO n 1 184 GLY n 1 185 GLN n 1 186 GLU n 1 187 TYR n 1 188 ASN n 1 189 VAL n 1 190 ARG n 1 191 VAL n 1 192 ALA n 1 193 SER n 1 194 ARG n 1 195 TYR n 1 196 PHE n 1 197 LYS n 1 198 GLY n 1 199 PRO n 1 200 GLU n 1 201 LEU n 1 202 LEU n 1 203 VAL n 1 204 ASP n 1 205 TYR n 1 206 GLN n 1 207 MET n 1 208 TYR n 1 209 ASP n 1 210 TYR n 1 211 SER n 1 212 LEU n 1 213 ASP n 1 214 MET n 1 215 TRP n 1 216 SER n 1 217 LEU n 1 218 GLY n 1 219 CYS n 1 220 MET n 1 221 LEU n 1 222 ALA n 1 223 SER n 1 224 MET n 1 225 ILE n 1 226 PHE n 1 227 ARG n 1 228 LYS n 1 229 GLU n 1 230 PRO n 1 231 PHE n 1 232 PHE n 1 233 HIS n 1 234 GLY n 1 235 HIS n 1 236 ASP n 1 237 ASN n 1 238 TYR n 1 239 ASP n 1 240 GLN n 1 241 LEU n 1 242 VAL n 1 243 ARG n 1 244 ILE n 1 245 ALA n 1 246 LYS n 1 247 VAL n 1 248 LEU n 1 249 GLY n 1 250 THR n 1 251 GLU n 1 252 ASP n 1 253 LEU n 1 254 TYR n 1 255 ASP n 1 256 TYR n 1 257 ILE n 1 258 ASP n 1 259 LYS n 1 260 TYR n 1 261 ASN n 1 262 ILE n 1 263 GLU n 1 264 LEU n 1 265 ASP n 1 266 PRO n 1 267 ARG n 1 268 PHE n 1 269 ASN n 1 270 ASP n 1 271 ILE n 1 272 LEU n 1 273 GLY n 1 274 ARG n 1 275 HIS n 1 276 SER n 1 277 ARG n 1 278 LYS n 1 279 ARG n 1 280 TRP n 1 281 GLU n 1 282 ARG n 1 283 PHE n 1 284 VAL n 1 285 HIS n 1 286 SER n 1 287 GLU n 1 288 ASN n 1 289 GLN n 1 290 HIS n 1 291 LEU n 1 292 VAL n 1 293 SER n 1 294 PRO n 1 295 GLU n 1 296 ALA n 1 297 LEU n 1 298 ASP n 1 299 PHE n 1 300 LEU n 1 301 ASP n 1 302 LYS n 1 303 LEU n 1 304 LEU n 1 305 ARG n 1 306 TYR n 1 307 ASP n 1 308 HIS n 1 309 GLN n 1 310 SER n 1 311 ARG n 1 312 LEU n 1 313 THR n 1 314 ALA n 1 315 ARG n 1 316 GLU n 1 317 ALA n 1 318 MET n 1 319 GLU n 1 320 HIS n 1 321 PRO n 1 322 TYR n 1 323 PHE n 1 324 TYR n 1 325 THR n 1 326 VAL n 1 327 VAL n 1 328 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 328 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CSNK2A1, CK2A1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHAT2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 ? ? ? A . n A 1 2 GLY 2 3 3 GLY GLY A . n A 1 3 PRO 3 4 4 PRO PRO A . n A 1 4 VAL 4 5 5 VAL VAL A . n A 1 5 PRO 5 6 6 PRO PRO A . n A 1 6 SER 6 7 7 SER SER A . n A 1 7 ARG 7 8 8 ARG ARG A . n A 1 8 ALA 8 9 9 ALA ALA A . n A 1 9 ARG 9 10 10 ARG ARG A . n A 1 10 VAL 10 11 11 VAL VAL A . n A 1 11 TYR 11 12 12 TYR TYR A . n A 1 12 THR 12 13 13 THR THR A . n A 1 13 ASP 13 14 14 ASP ASP A . n A 1 14 VAL 14 15 15 VAL VAL A . n A 1 15 ASN 15 16 16 ASN ASN A . n A 1 16 THR 16 17 17 THR THR A . n A 1 17 HIS 17 18 18 HIS HIS A . n A 1 18 ARG 18 19 19 ARG ARG A . n A 1 19 PRO 19 20 20 PRO PRO A . n A 1 20 SER 20 21 21 SER SER A . n A 1 21 GLU 21 22 22 GLU GLU A . n A 1 22 TYR 22 23 23 TYR TYR A . n A 1 23 TRP 23 24 24 TRP TRP A . n A 1 24 ASP 24 25 25 ASP ASP A . n A 1 25 TYR 25 26 26 TYR TYR A . n A 1 26 GLU 26 27 27 GLU GLU A . n A 1 27 SER 27 28 28 SER SER A . n A 1 28 HIS 28 29 29 HIS HIS A . n A 1 29 VAL 29 30 30 VAL VAL A . n A 1 30 VAL 30 31 31 VAL VAL A . n A 1 31 GLU 31 32 32 GLU GLU A . n A 1 32 TRP 32 33 33 TRP TRP A . n A 1 33 GLY 33 34 34 GLY GLY A . n A 1 34 ASN 34 35 35 ASN ASN A . n A 1 35 GLN 35 36 36 GLN GLN A . n A 1 36 ASP 36 37 37 ASP ASP A . n A 1 37 ASP 37 38 38 ASP ASP A . n A 1 38 TYR 38 39 39 TYR TYR A . n A 1 39 GLN 39 40 40 GLN GLN A . n A 1 40 LEU 40 41 41 LEU LEU A . n A 1 41 VAL 41 42 42 VAL VAL A . n A 1 42 ARG 42 43 43 ARG ARG A . n A 1 43 LYS 43 44 44 LYS LYS A . n A 1 44 LEU 44 45 45 LEU LEU A . n A 1 45 GLY 45 46 46 GLY GLY A . n A 1 46 ARG 46 47 47 ARG ARG A . n A 1 47 GLY 47 48 48 GLY GLY A . n A 1 48 LYS 48 49 49 LYS LYS A . n A 1 49 TYR 49 50 50 TYR TYR A . n A 1 50 SER 50 51 51 SER SER A . n A 1 51 GLU 51 52 52 GLU GLU A . n A 1 52 VAL 52 53 53 VAL VAL A . n A 1 53 PHE 53 54 54 PHE PHE A . n A 1 54 GLU 54 55 55 GLU GLU A . n A 1 55 ALA 55 56 56 ALA ALA A . n A 1 56 ILE 56 57 57 ILE ILE A . n A 1 57 ASN 57 58 58 ASN ASN A . n A 1 58 ILE 58 59 59 ILE ILE A . n A 1 59 THR 59 60 60 THR THR A . n A 1 60 ASN 60 61 61 ASN ASN A . n A 1 61 ASN 61 62 62 ASN ASN A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 LYS 63 64 64 LYS LYS A . n A 1 64 VAL 64 65 65 VAL VAL A . n A 1 65 VAL 65 66 66 VAL VAL A . n A 1 66 VAL 66 67 67 VAL VAL A . n A 1 67 LYS 67 68 68 LYS LYS A . n A 1 68 ILE 68 69 69 ILE ILE A . n A 1 69 LEU 69 70 70 LEU LEU A . n A 1 70 LYS 70 71 71 LYS LYS A . n A 1 71 PRO 71 72 72 PRO PRO A . n A 1 72 VAL 72 73 73 VAL VAL A . n A 1 73 ALA 73 74 74 ALA ALA A . n A 1 74 ALA 74 75 75 ALA ALA A . n A 1 75 ALA 75 76 76 ALA ALA A . n A 1 76 LYS 76 77 77 LYS LYS A . n A 1 77 ILE 77 78 78 ILE ILE A . n A 1 78 LYS 78 79 79 LYS LYS A . n A 1 79 ARG 79 80 80 ARG ARG A . n A 1 80 GLU 80 81 81 GLU GLU A . n A 1 81 ILE 81 82 82 ILE ILE A . n A 1 82 LYS 82 83 83 LYS LYS A . n A 1 83 ILE 83 84 84 ILE ILE A . n A 1 84 LEU 84 85 85 LEU LEU A . n A 1 85 GLU 85 86 86 GLU GLU A . n A 1 86 ASN 86 87 87 ASN ASN A . n A 1 87 LEU 87 88 88 LEU LEU A . n A 1 88 ARG 88 89 89 ARG ARG A . n A 1 89 GLY 89 90 90 GLY GLY A . n A 1 90 GLY 90 91 91 GLY GLY A . n A 1 91 PRO 91 92 92 PRO PRO A . n A 1 92 ASN 92 93 93 ASN ASN A . n A 1 93 ILE 93 94 94 ILE ILE A . n A 1 94 ILE 94 95 95 ILE ILE A . n A 1 95 THR 95 96 96 THR THR A . n A 1 96 LEU 96 97 97 LEU LEU A . n A 1 97 ALA 97 98 98 ALA ALA A . n A 1 98 ASP 98 99 99 ASP ASP A . n A 1 99 ILE 99 100 100 ILE ILE A . n A 1 100 VAL 100 101 101 VAL VAL A . n A 1 101 LYS 101 102 102 LYS LYS A . n A 1 102 ASP 102 103 103 ASP ASP A . n A 1 103 PRO 103 104 104 PRO PRO A . n A 1 104 VAL 104 105 105 VAL VAL A . n A 1 105 SER 105 106 106 SER SER A . n A 1 106 ARG 106 107 107 ARG ARG A . n A 1 107 THR 107 108 108 THR THR A . n A 1 108 PRO 108 109 109 PRO PRO A . n A 1 109 ALA 109 110 110 ALA ALA A . n A 1 110 LEU 110 111 111 LEU LEU A . n A 1 111 VAL 111 112 112 VAL VAL A . n A 1 112 PHE 112 113 113 PHE PHE A . n A 1 113 GLU 113 114 114 GLU GLU A . n A 1 114 HIS 114 115 115 HIS HIS A . n A 1 115 VAL 115 116 116 VAL VAL A . n A 1 116 ASN 116 117 117 ASN ASN A . n A 1 117 ASN 117 118 118 ASN ASN A . n A 1 118 THR 118 119 119 THR THR A . n A 1 119 ASP 119 120 120 ASP ASP A . n A 1 120 PHE 120 121 121 PHE PHE A . n A 1 121 LYS 121 122 122 LYS LYS A . n A 1 122 GLN 122 123 123 GLN GLN A . n A 1 123 LEU 123 124 124 LEU LEU A . n A 1 124 TYR 124 125 125 TYR TYR A . n A 1 125 GLN 125 126 126 GLN GLN A . n A 1 126 THR 126 127 127 THR THR A . n A 1 127 LEU 127 128 128 LEU LEU A . n A 1 128 THR 128 129 129 THR THR A . n A 1 129 ASP 129 130 130 ASP ASP A . n A 1 130 TYR 130 131 131 TYR TYR A . n A 1 131 ASP 131 132 132 ASP ASP A . n A 1 132 ILE 132 133 133 ILE ILE A . n A 1 133 ARG 133 134 134 ARG ARG A . n A 1 134 PHE 134 135 135 PHE PHE A . n A 1 135 TYR 135 136 136 TYR TYR A . n A 1 136 MET 136 137 137 MET MET A . n A 1 137 TYR 137 138 138 TYR TYR A . n A 1 138 GLU 138 139 139 GLU GLU A . n A 1 139 ILE 139 140 140 ILE ILE A . n A 1 140 LEU 140 141 141 LEU LEU A . n A 1 141 LYS 141 142 142 LYS LYS A . n A 1 142 ALA 142 143 143 ALA ALA A . n A 1 143 LEU 143 144 144 LEU LEU A . n A 1 144 ASP 144 145 145 ASP ASP A . n A 1 145 TYR 145 146 146 TYR TYR A . n A 1 146 CYS 146 147 147 CYS CYS A . n A 1 147 HIS 147 148 148 HIS HIS A . n A 1 148 SER 148 149 149 SER SER A . n A 1 149 MET 149 150 150 MET MET A . n A 1 150 GLY 150 151 151 GLY GLY A . n A 1 151 ILE 151 152 152 ILE ILE A . n A 1 152 MET 152 153 153 MET MET A . n A 1 153 HIS 153 154 154 HIS HIS A . n A 1 154 ARG 154 155 155 ARG ARG A . n A 1 155 ASP 155 156 156 ASP ASP A . n A 1 156 VAL 156 157 157 VAL VAL A . n A 1 157 LYS 157 158 158 LYS LYS A . n A 1 158 PRO 158 159 159 PRO PRO A . n A 1 159 HIS 159 160 160 HIS HIS A . n A 1 160 ASN 160 161 161 ASN ASN A . n A 1 161 VAL 161 162 162 VAL VAL A . n A 1 162 MET 162 163 163 MET MET A . n A 1 163 ILE 163 164 164 ILE ILE A . n A 1 164 ASP 164 165 165 ASP ASP A . n A 1 165 HIS 165 166 166 HIS HIS A . n A 1 166 GLU 166 167 167 GLU GLU A . n A 1 167 HIS 167 168 168 HIS HIS A . n A 1 168 ARG 168 169 169 ARG ARG A . n A 1 169 LYS 169 170 170 LYS LYS A . n A 1 170 LEU 170 171 171 LEU LEU A . n A 1 171 ARG 171 172 172 ARG ARG A . n A 1 172 LEU 172 173 173 LEU LEU A . n A 1 173 ILE 173 174 174 ILE ILE A . n A 1 174 ASP 174 175 175 ASP ASP A . n A 1 175 TRP 175 176 176 TRP TRP A . n A 1 176 GLY 176 177 177 GLY GLY A . n A 1 177 LEU 177 178 178 LEU LEU A . n A 1 178 ALA 178 179 179 ALA ALA A . n A 1 179 GLU 179 180 180 GLU GLU A . n A 1 180 PHE 180 181 181 PHE PHE A . n A 1 181 TYR 181 182 182 TYR TYR A . n A 1 182 HIS 182 183 183 HIS HIS A . n A 1 183 PRO 183 184 184 PRO PRO A . n A 1 184 GLY 184 185 185 GLY GLY A . n A 1 185 GLN 185 186 186 GLN GLN A . n A 1 186 GLU 186 187 187 GLU GLU A . n A 1 187 TYR 187 188 188 TYR TYR A . n A 1 188 ASN 188 189 189 ASN ASN A . n A 1 189 VAL 189 190 190 VAL VAL A . n A 1 190 ARG 190 191 191 ARG ARG A . n A 1 191 VAL 191 192 192 VAL VAL A . n A 1 192 ALA 192 193 193 ALA ALA A . n A 1 193 SER 193 194 194 SER SER A . n A 1 194 ARG 194 195 195 ARG ARG A . n A 1 195 TYR 195 196 196 TYR TYR A . n A 1 196 PHE 196 197 197 PHE PHE A . n A 1 197 LYS 197 198 198 LYS LYS A . n A 1 198 GLY 198 199 199 GLY GLY A . n A 1 199 PRO 199 200 200 PRO PRO A . n A 1 200 GLU 200 201 201 GLU GLU A . n A 1 201 LEU 201 202 202 LEU LEU A . n A 1 202 LEU 202 203 203 LEU LEU A . n A 1 203 VAL 203 204 204 VAL VAL A . n A 1 204 ASP 204 205 205 ASP ASP A . n A 1 205 TYR 205 206 206 TYR TYR A . n A 1 206 GLN 206 207 207 GLN GLN A . n A 1 207 MET 207 208 208 MET MET A . n A 1 208 TYR 208 209 209 TYR TYR A . n A 1 209 ASP 209 210 210 ASP ASP A . n A 1 210 TYR 210 211 211 TYR TYR A . n A 1 211 SER 211 212 212 SER SER A . n A 1 212 LEU 212 213 213 LEU LEU A . n A 1 213 ASP 213 214 214 ASP ASP A . n A 1 214 MET 214 215 215 MET MET A . n A 1 215 TRP 215 216 216 TRP TRP A . n A 1 216 SER 216 217 217 SER SER A . n A 1 217 LEU 217 218 218 LEU LEU A . n A 1 218 GLY 218 219 219 GLY GLY A . n A 1 219 CYS 219 220 220 CYS CYS A . n A 1 220 MET 220 221 221 MET MET A . n A 1 221 LEU 221 222 222 LEU LEU A . n A 1 222 ALA 222 223 223 ALA ALA A . n A 1 223 SER 223 224 224 SER SER A . n A 1 224 MET 224 225 225 MET MET A . n A 1 225 ILE 225 226 226 ILE ILE A . n A 1 226 PHE 226 227 227 PHE PHE A . n A 1 227 ARG 227 228 228 ARG ARG A . n A 1 228 LYS 228 229 229 LYS LYS A . n A 1 229 GLU 229 230 230 GLU GLU A . n A 1 230 PRO 230 231 231 PRO PRO A . n A 1 231 PHE 231 232 232 PHE PHE A . n A 1 232 PHE 232 233 233 PHE PHE A . n A 1 233 HIS 233 234 234 HIS HIS A . n A 1 234 GLY 234 235 235 GLY GLY A . n A 1 235 HIS 235 236 236 HIS HIS A . n A 1 236 ASP 236 237 237 ASP ASP A . n A 1 237 ASN 237 238 238 ASN ASN A . n A 1 238 TYR 238 239 239 TYR TYR A . n A 1 239 ASP 239 240 240 ASP ASP A . n A 1 240 GLN 240 241 241 GLN GLN A . n A 1 241 LEU 241 242 242 LEU LEU A . n A 1 242 VAL 242 243 243 VAL VAL A . n A 1 243 ARG 243 244 244 ARG ARG A . n A 1 244 ILE 244 245 245 ILE ILE A . n A 1 245 ALA 245 246 246 ALA ALA A . n A 1 246 LYS 246 247 247 LYS LYS A . n A 1 247 VAL 247 248 248 VAL VAL A . n A 1 248 LEU 248 249 249 LEU LEU A . n A 1 249 GLY 249 250 250 GLY GLY A . n A 1 250 THR 250 251 251 THR THR A . n A 1 251 GLU 251 252 252 GLU GLU A . n A 1 252 ASP 252 253 253 ASP ASP A . n A 1 253 LEU 253 254 254 LEU LEU A . n A 1 254 TYR 254 255 255 TYR TYR A . n A 1 255 ASP 255 256 256 ASP ASP A . n A 1 256 TYR 256 257 257 TYR TYR A . n A 1 257 ILE 257 258 258 ILE ILE A . n A 1 258 ASP 258 259 259 ASP ASP A . n A 1 259 LYS 259 260 260 LYS LYS A . n A 1 260 TYR 260 261 261 TYR TYR A . n A 1 261 ASN 261 262 262 ASN ASN A . n A 1 262 ILE 262 263 263 ILE ILE A . n A 1 263 GLU 263 264 264 GLU GLU A . n A 1 264 LEU 264 265 265 LEU LEU A . n A 1 265 ASP 265 266 266 ASP ASP A . n A 1 266 PRO 266 267 267 PRO PRO A . n A 1 267 ARG 267 268 268 ARG ARG A . n A 1 268 PHE 268 269 269 PHE PHE A . n A 1 269 ASN 269 270 270 ASN ASN A . n A 1 270 ASP 270 271 271 ASP ASP A . n A 1 271 ILE 271 272 272 ILE ILE A . n A 1 272 LEU 272 273 273 LEU LEU A . n A 1 273 GLY 273 274 274 GLY GLY A . n A 1 274 ARG 274 275 275 ARG ARG A . n A 1 275 HIS 275 276 276 HIS HIS A . n A 1 276 SER 276 277 277 SER SER A . n A 1 277 ARG 277 278 278 ARG ARG A . n A 1 278 LYS 278 279 279 LYS LYS A . n A 1 279 ARG 279 280 280 ARG ARG A . n A 1 280 TRP 280 281 281 TRP TRP A . n A 1 281 GLU 281 282 282 GLU GLU A . n A 1 282 ARG 282 283 283 ARG ARG A . n A 1 283 PHE 283 284 284 PHE PHE A . n A 1 284 VAL 284 285 285 VAL VAL A . n A 1 285 HIS 285 286 286 HIS HIS A . n A 1 286 SER 286 287 287 SER SER A . n A 1 287 GLU 287 288 288 GLU GLU A . n A 1 288 ASN 288 289 289 ASN ASN A . n A 1 289 GLN 289 290 290 GLN GLN A . n A 1 290 HIS 290 291 291 HIS HIS A . n A 1 291 LEU 291 292 292 LEU LEU A . n A 1 292 VAL 292 293 293 VAL VAL A . n A 1 293 SER 293 294 294 SER SER A . n A 1 294 PRO 294 295 295 PRO PRO A . n A 1 295 GLU 295 296 296 GLU GLU A . n A 1 296 ALA 296 297 297 ALA ALA A . n A 1 297 LEU 297 298 298 LEU LEU A . n A 1 298 ASP 298 299 299 ASP ASP A . n A 1 299 PHE 299 300 300 PHE PHE A . n A 1 300 LEU 300 301 301 LEU LEU A . n A 1 301 ASP 301 302 302 ASP ASP A . n A 1 302 LYS 302 303 303 LYS LYS A . n A 1 303 LEU 303 304 304 LEU LEU A . n A 1 304 LEU 304 305 305 LEU LEU A . n A 1 305 ARG 305 306 306 ARG ARG A . n A 1 306 TYR 306 307 307 TYR TYR A . n A 1 307 ASP 307 308 308 ASP ASP A . n A 1 308 HIS 308 309 309 HIS HIS A . n A 1 309 GLN 309 310 310 GLN GLN A . n A 1 310 SER 310 311 311 SER SER A . n A 1 311 ARG 311 312 312 ARG ARG A . n A 1 312 LEU 312 313 313 LEU LEU A . n A 1 313 THR 313 314 314 THR THR A . n A 1 314 ALA 314 315 315 ALA ALA A . n A 1 315 ARG 315 316 316 ARG ARG A . n A 1 316 GLU 316 317 317 GLU GLU A . n A 1 317 ALA 317 318 318 ALA ALA A . n A 1 318 MET 318 319 319 MET MET A . n A 1 319 GLU 319 320 320 GLU GLU A . n A 1 320 HIS 320 321 321 HIS HIS A . n A 1 321 PRO 321 322 322 PRO PRO A . n A 1 322 TYR 322 323 323 TYR TYR A . n A 1 323 PHE 323 324 324 PHE PHE A . n A 1 324 TYR 324 325 325 TYR TYR A . n A 1 325 THR 325 326 326 THR THR A . n A 1 326 VAL 326 327 327 VAL VAL A . n A 1 327 VAL 327 328 328 VAL VAL A . n A 1 328 LYS 328 329 329 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP 1 401 401 GDP GDP A . C 3 HOH 1 501 151 HOH HOH A . C 3 HOH 2 502 73 HOH HOH A . C 3 HOH 3 503 42 HOH HOH A . C 3 HOH 4 504 110 HOH HOH A . C 3 HOH 5 505 161 HOH HOH A . C 3 HOH 6 506 11 HOH HOH A . C 3 HOH 7 507 159 HOH HOH A . C 3 HOH 8 508 12 HOH HOH A . C 3 HOH 9 509 64 HOH HOH A . C 3 HOH 10 510 4 HOH HOH A . C 3 HOH 11 511 43 HOH HOH A . C 3 HOH 12 512 48 HOH HOH A . C 3 HOH 13 513 22 HOH HOH A . C 3 HOH 14 514 85 HOH HOH A . C 3 HOH 15 515 91 HOH HOH A . C 3 HOH 16 516 39 HOH HOH A . C 3 HOH 17 517 46 HOH HOH A . C 3 HOH 18 518 78 HOH HOH A . C 3 HOH 19 519 34 HOH HOH A . C 3 HOH 20 520 26 HOH HOH A . C 3 HOH 21 521 41 HOH HOH A . C 3 HOH 22 522 74 HOH HOH A . C 3 HOH 23 523 50 HOH HOH A . C 3 HOH 24 524 94 HOH HOH A . C 3 HOH 25 525 19 HOH HOH A . C 3 HOH 26 526 109 HOH HOH A . C 3 HOH 27 527 23 HOH HOH A . C 3 HOH 28 528 9 HOH HOH A . C 3 HOH 29 529 155 HOH HOH A . C 3 HOH 30 530 21 HOH HOH A . C 3 HOH 31 531 45 HOH HOH A . C 3 HOH 32 532 127 HOH HOH A . C 3 HOH 33 533 152 HOH HOH A . C 3 HOH 34 534 68 HOH HOH A . C 3 HOH 35 535 86 HOH HOH A . C 3 HOH 36 536 76 HOH HOH A . C 3 HOH 37 537 72 HOH HOH A . C 3 HOH 38 538 25 HOH HOH A . C 3 HOH 39 539 15 HOH HOH A . C 3 HOH 40 540 32 HOH HOH A . C 3 HOH 41 541 96 HOH HOH A . C 3 HOH 42 542 92 HOH HOH A . C 3 HOH 43 543 84 HOH HOH A . C 3 HOH 44 544 120 HOH HOH A . C 3 HOH 45 545 107 HOH HOH A . C 3 HOH 46 546 49 HOH HOH A . C 3 HOH 47 547 122 HOH HOH A . C 3 HOH 48 548 124 HOH HOH A . C 3 HOH 49 549 106 HOH HOH A . C 3 HOH 50 550 14 HOH HOH A . C 3 HOH 51 551 156 HOH HOH A . C 3 HOH 52 552 37 HOH HOH A . C 3 HOH 53 553 142 HOH HOH A . C 3 HOH 54 554 82 HOH HOH A . C 3 HOH 55 555 115 HOH HOH A . C 3 HOH 56 556 140 HOH HOH A . C 3 HOH 57 557 65 HOH HOH A . C 3 HOH 58 558 148 HOH HOH A . C 3 HOH 59 559 6 HOH HOH A . C 3 HOH 60 560 2 HOH HOH A . C 3 HOH 61 561 1 HOH HOH A . C 3 HOH 62 562 56 HOH HOH A . C 3 HOH 63 563 135 HOH HOH A . C 3 HOH 64 564 102 HOH HOH A . C 3 HOH 65 565 13 HOH HOH A . C 3 HOH 66 566 62 HOH HOH A . C 3 HOH 67 567 8 HOH HOH A . C 3 HOH 68 568 153 HOH HOH A . C 3 HOH 69 569 18 HOH HOH A . C 3 HOH 70 570 128 HOH HOH A . C 3 HOH 71 571 137 HOH HOH A . C 3 HOH 72 572 51 HOH HOH A . C 3 HOH 73 573 3 HOH HOH A . C 3 HOH 74 574 10 HOH HOH A . C 3 HOH 75 575 130 HOH HOH A . C 3 HOH 76 576 67 HOH HOH A . C 3 HOH 77 577 97 HOH HOH A . C 3 HOH 78 578 132 HOH HOH A . C 3 HOH 79 579 75 HOH HOH A . C 3 HOH 80 580 17 HOH HOH A . C 3 HOH 81 581 117 HOH HOH A . C 3 HOH 82 582 47 HOH HOH A . C 3 HOH 83 583 89 HOH HOH A . C 3 HOH 84 584 58 HOH HOH A . C 3 HOH 85 585 16 HOH HOH A . C 3 HOH 86 586 69 HOH HOH A . C 3 HOH 87 587 5 HOH HOH A . C 3 HOH 88 588 88 HOH HOH A . C 3 HOH 89 589 116 HOH HOH A . C 3 HOH 90 590 112 HOH HOH A . C 3 HOH 91 591 103 HOH HOH A . C 3 HOH 92 592 114 HOH HOH A . C 3 HOH 93 593 71 HOH HOH A . C 3 HOH 94 594 113 HOH HOH A . C 3 HOH 95 595 98 HOH HOH A . C 3 HOH 96 596 129 HOH HOH A . C 3 HOH 97 597 145 HOH HOH A . C 3 HOH 98 598 158 HOH HOH A . C 3 HOH 99 599 31 HOH HOH A . C 3 HOH 100 600 131 HOH HOH A . C 3 HOH 101 601 79 HOH HOH A . C 3 HOH 102 602 157 HOH HOH A . C 3 HOH 103 603 104 HOH HOH A . C 3 HOH 104 604 29 HOH HOH A . C 3 HOH 105 605 60 HOH HOH A . C 3 HOH 106 606 40 HOH HOH A . C 3 HOH 107 607 33 HOH HOH A . C 3 HOH 108 608 36 HOH HOH A . C 3 HOH 109 609 70 HOH HOH A . C 3 HOH 110 610 53 HOH HOH A . C 3 HOH 111 611 55 HOH HOH A . C 3 HOH 112 612 81 HOH HOH A . C 3 HOH 113 613 136 HOH HOH A . C 3 HOH 114 614 66 HOH HOH A . C 3 HOH 115 615 44 HOH HOH A . C 3 HOH 116 616 80 HOH HOH A . C 3 HOH 117 617 119 HOH HOH A . C 3 HOH 118 618 146 HOH HOH A . C 3 HOH 119 619 57 HOH HOH A . C 3 HOH 120 620 147 HOH HOH A . C 3 HOH 121 621 149 HOH HOH A . C 3 HOH 122 622 77 HOH HOH A . C 3 HOH 123 623 141 HOH HOH A . C 3 HOH 124 624 118 HOH HOH A . C 3 HOH 125 625 111 HOH HOH A . C 3 HOH 126 626 90 HOH HOH A . C 3 HOH 127 627 150 HOH HOH A . C 3 HOH 128 628 105 HOH HOH A . C 3 HOH 129 629 101 HOH HOH A . C 3 HOH 130 630 99 HOH HOH A . C 3 HOH 131 631 93 HOH HOH A . C 3 HOH 132 632 123 HOH HOH A . C 3 HOH 133 633 138 HOH HOH A . C 3 HOH 134 634 87 HOH HOH A . C 3 HOH 135 635 133 HOH HOH A . C 3 HOH 136 636 139 HOH HOH A . C 3 HOH 137 637 154 HOH HOH A . C 3 HOH 138 638 38 HOH HOH A . C 3 HOH 139 639 61 HOH HOH A . C 3 HOH 140 640 134 HOH HOH A . C 3 HOH 141 641 160 HOH HOH A . C 3 HOH 142 642 108 HOH HOH A . C 3 HOH 143 643 63 HOH HOH A . C 3 HOH 144 644 125 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 1 ? 'data scaling' ? ? 'Phil Evans' ? 18/05/16 ? ? ? ? http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? Aimless ? ? program 0.5.27 2 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 3 ? refinement ? ? 'Gerard Bricogne' buster-develop@GlobalPhasing.com ? ? ? ? ? http://www.globalphasing.com/buster/ ? BUSTER ? ? program 2.10.3 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Apr. 1, 2019' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.25 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 110.980 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6YPK _cell.details ? _cell.formula_units_Z ? _cell.length_a 57.700 _cell.length_a_esd ? _cell.length_b 45.370 _cell.length_b_esd ? _cell.length_c 63.490 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YPK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6YPK _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 38.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity 0.000 _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '112.5mM Mes, 35% glycerol ethoxylate, 180 mM ammonium acetate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-09-25 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9686 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I24' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9686 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I24 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 29.950 _reflns.entry_id 6YPK _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.790 _reflns.d_resolution_low 49.700 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 28931 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.200 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.300 _reflns.pdbx_Rmerge_I_obs 0.138 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 6.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.165 _reflns.pdbx_Rpim_I_all 0.090 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 94177 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.982 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.790 1.840 ? ? 6779 ? ? ? 2102 99.000 ? ? ? ? 0.806 ? ? ? ? ? ? ? ? 3.200 ? ? ? 1.500 0.970 0.533 ? 1 1 0.544 ? ? 8.010 49.700 ? ? 1043 ? ? ? 348 96.200 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 3.000 ? ? ? 13.100 0.107 0.059 ? 2 1 0.976 ? ? # _refine.aniso_B[1][1] -1.7640 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 6.4984 _refine.aniso_B[2][2] 4.5072 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -2.7432 _refine.B_iso_max 119.580 _refine.B_iso_mean 34.2100 _refine.B_iso_min 15.110 _refine.correlation_coeff_Fo_to_Fc 0.9480 _refine.correlation_coeff_Fo_to_Fc_free 0.9340 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6YPK _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.7900 _refine.ls_d_res_low 22.3100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28903 _refine.ls_number_reflns_R_free 1467 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.2000 _refine.ls_percent_reflns_R_free 5.0800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1810 _refine.ls_R_factor_R_free 0.2100 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1790 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5CVH _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.1200 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.1190 _refine.pdbx_overall_SU_R_Blow_DPI 0.1330 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.1340 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.7900 _refine_hist.d_res_low 22.3100 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 2920 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 327 _refine_hist.pdbx_B_iso_mean_ligand 42.88 _refine_hist.pdbx_B_iso_mean_solvent 38.29 _refine_hist.pdbx_number_atoms_protein 2748 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 1027 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? 73 ? t_trig_c_planes 2.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 436 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 2906 ? t_it 20.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 354 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 3440 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.010 ? 2906 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 0.990 ? 3951 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.200 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 18.670 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.7900 _refine_ls_shell.d_res_low 1.8500 _refine_ls_shell.number_reflns_all 2792 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 156 _refine_ls_shell.number_reflns_R_work 2636 _refine_ls_shell.percent_reflns_obs 98.7300 _refine_ls_shell.percent_reflns_R_free 5.5900 _refine_ls_shell.R_factor_all 0.2662 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3019 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2641 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 15 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6YPK _struct.title 'Crystal Structure of CK2alpha with GTP bound' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6YPK _struct_keywords.text 'selective ATP competitive inhibitors, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CSK21_HUMAN _struct_ref.pdbx_db_accession P68400 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKRE IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN VMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ LVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH PYFYTVVK ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6YPK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 328 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P68400 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 329 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 329 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6YPK SER A 20 ? UNP P68400 ARG 21 'engineered mutation' 21 1 1 6YPK ALA A 73 ? UNP P68400 LYS 74 'engineered mutation' 74 2 1 6YPK ALA A 74 ? UNP P68400 LYS 75 'engineered mutation' 75 3 1 6YPK ALA A 75 ? UNP P68400 LYS 76 'engineered mutation' 76 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 730 ? 1 MORE -3 ? 1 'SSA (A^2)' 15250 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 13 ? ARG A 18 ? ASP A 14 ARG A 19 1 ? 6 HELX_P HELX_P2 AA2 PRO A 19 ? ASP A 24 ? PRO A 20 ASP A 25 1 ? 6 HELX_P HELX_P3 AA3 TYR A 25 ? HIS A 28 ? TYR A 26 HIS A 29 5 ? 4 HELX_P HELX_P4 AA4 ASN A 34 ? ASP A 36 ? ASN A 35 ASP A 37 5 ? 3 HELX_P HELX_P5 AA5 LYS A 70 ? ALA A 75 ? LYS A 71 ALA A 76 1 ? 6 HELX_P HELX_P6 AA6 LYS A 76 ? ARG A 88 ? LYS A 77 ARG A 89 1 ? 13 HELX_P HELX_P7 AA7 ASP A 119 ? LEU A 123 ? ASP A 120 LEU A 124 5 ? 5 HELX_P HELX_P8 AA8 THR A 128 ? MET A 149 ? THR A 129 MET A 150 1 ? 22 HELX_P HELX_P9 AA9 LYS A 157 ? HIS A 159 ? LYS A 158 HIS A 160 5 ? 3 HELX_P HELX_P10 AB1 SER A 193 ? LYS A 197 ? SER A 194 LYS A 198 5 ? 5 HELX_P HELX_P11 AB2 GLY A 198 ? VAL A 203 ? GLY A 199 VAL A 204 1 ? 6 HELX_P HELX_P12 AB3 TYR A 210 ? ARG A 227 ? TYR A 211 ARG A 228 1 ? 18 HELX_P HELX_P13 AB4 ASP A 236 ? GLY A 249 ? ASP A 237 GLY A 250 1 ? 14 HELX_P HELX_P14 AB5 GLY A 249 ? TYR A 260 ? GLY A 250 TYR A 261 1 ? 12 HELX_P HELX_P15 AB6 ASP A 265 ? ILE A 271 ? ASP A 266 ILE A 272 5 ? 7 HELX_P HELX_P16 AB7 ARG A 279 ? VAL A 284 ? ARG A 280 VAL A 285 5 ? 6 HELX_P HELX_P17 AB8 ASN A 288 ? VAL A 292 ? ASN A 289 VAL A 293 5 ? 5 HELX_P HELX_P18 AB9 SER A 293 ? LEU A 304 ? SER A 294 LEU A 305 1 ? 12 HELX_P HELX_P19 AC1 ASP A 307 ? ARG A 311 ? ASP A 308 ARG A 312 5 ? 5 HELX_P HELX_P20 AC2 THR A 313 ? GLU A 319 ? THR A 314 GLU A 320 1 ? 7 HELX_P HELX_P21 AC3 HIS A 320 ? TYR A 324 ? HIS A 321 TYR A 325 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 229 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 230 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 230 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 231 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -9.39 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 2 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 38 ? ARG A 46 ? TYR A 39 ARG A 47 AA1 2 SER A 50 ? ASN A 57 ? SER A 51 ASN A 58 AA1 3 GLU A 62 ? LEU A 69 ? GLU A 63 LEU A 70 AA1 4 PRO A 108 ? GLU A 113 ? PRO A 109 GLU A 114 AA1 5 LEU A 96 ? LYS A 101 ? LEU A 97 LYS A 102 AA2 1 ILE A 151 ? MET A 152 ? ILE A 152 MET A 153 AA2 2 GLU A 179 ? PHE A 180 ? GLU A 180 PHE A 181 AA3 1 VAL A 161 ? ASP A 164 ? VAL A 162 ASP A 165 AA3 2 LYS A 169 ? LEU A 172 ? LYS A 170 LEU A 173 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 44 ? N LEU A 45 O VAL A 52 ? O VAL A 53 AA1 2 3 N GLU A 51 ? N GLU A 52 O ILE A 68 ? O ILE A 69 AA1 3 4 N LYS A 67 ? N LYS A 68 O LEU A 110 ? O LEU A 111 AA1 4 5 O VAL A 111 ? O VAL A 112 N ALA A 97 ? N ALA A 98 AA2 1 2 N MET A 152 ? N MET A 153 O GLU A 179 ? O GLU A 180 AA3 1 2 N ASP A 164 ? N ASP A 165 O LYS A 169 ? O LYS A 170 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GDP _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 15 _struct_site.details 'binding site for residue GDP A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 TYR A 49 ? TYR A 50 . ? 1_555 ? 2 AC1 15 LYS A 67 ? LYS A 68 . ? 1_555 ? 3 AC1 15 LEU A 69 ? LEU A 70 . ? 1_555 ? 4 AC1 15 VAL A 72 ? VAL A 73 . ? 1_555 ? 5 AC1 15 ALA A 73 ? ALA A 74 . ? 1_555 ? 6 AC1 15 LYS A 76 ? LYS A 77 . ? 1_555 ? 7 AC1 15 ARG A 79 ? ARG A 80 . ? 1_555 ? 8 AC1 15 GLU A 80 ? GLU A 81 . ? 1_555 ? 9 AC1 15 ARG A 154 ? ARG A 155 . ? 1_555 ? 10 AC1 15 ASP A 174 ? ASP A 175 . ? 1_555 ? 11 AC1 15 GLY A 176 ? GLY A 177 . ? 1_555 ? 12 AC1 15 ASN A 188 ? ASN A 189 . ? 1_555 ? 13 AC1 15 HOH C . ? HOH A 505 . ? 1_555 ? 14 AC1 15 HOH C . ? HOH A 529 . ? 1_555 ? 15 AC1 15 HOH C . ? HOH A 551 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 156 ? ? -146.33 41.25 2 1 ASP A 175 ? ? 50.19 77.75 3 1 ALA A 193 ? ? 64.56 166.29 4 1 MET A 208 ? ? -90.56 53.28 5 1 ASP A 210 ? ? -147.19 -155.02 6 1 HIS A 234 ? ? -102.76 67.59 # _phasing.method MR # _pdbx_entry_details.entry_id 6YPK _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 2 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GDP PB P N N 88 GDP O1B O N N 89 GDP O2B O N N 90 GDP O3B O N N 91 GDP O3A O N N 92 GDP PA P N N 93 GDP O1A O N N 94 GDP O2A O N N 95 GDP "O5'" O N N 96 GDP "C5'" C N N 97 GDP "C4'" C N R 98 GDP "O4'" O N N 99 GDP "C3'" C N S 100 GDP "O3'" O N N 101 GDP "C2'" C N R 102 GDP "O2'" O N N 103 GDP "C1'" C N R 104 GDP N9 N Y N 105 GDP C8 C Y N 106 GDP N7 N Y N 107 GDP C5 C Y N 108 GDP C6 C N N 109 GDP O6 O N N 110 GDP N1 N N N 111 GDP C2 C N N 112 GDP N2 N N N 113 GDP N3 N N N 114 GDP C4 C Y N 115 GDP HOB2 H N N 116 GDP HOB3 H N N 117 GDP HOA2 H N N 118 GDP "H5'" H N N 119 GDP "H5''" H N N 120 GDP "H4'" H N N 121 GDP "H3'" H N N 122 GDP "HO3'" H N N 123 GDP "H2'" H N N 124 GDP "HO2'" H N N 125 GDP "H1'" H N N 126 GDP H8 H N N 127 GDP HN1 H N N 128 GDP HN21 H N N 129 GDP HN22 H N N 130 GLN N N N N 131 GLN CA C N S 132 GLN C C N N 133 GLN O O N N 134 GLN CB C N N 135 GLN CG C N N 136 GLN CD C N N 137 GLN OE1 O N N 138 GLN NE2 N N N 139 GLN OXT O N N 140 GLN H H N N 141 GLN H2 H N N 142 GLN HA H N N 143 GLN HB2 H N N 144 GLN HB3 H N N 145 GLN HG2 H N N 146 GLN HG3 H N N 147 GLN HE21 H N N 148 GLN HE22 H N N 149 GLN HXT H N N 150 GLU N N N N 151 GLU CA C N S 152 GLU C C N N 153 GLU O O N N 154 GLU CB C N N 155 GLU CG C N N 156 GLU CD C N N 157 GLU OE1 O N N 158 GLU OE2 O N N 159 GLU OXT O N N 160 GLU H H N N 161 GLU H2 H N N 162 GLU HA H N N 163 GLU HB2 H N N 164 GLU HB3 H N N 165 GLU HG2 H N N 166 GLU HG3 H N N 167 GLU HE2 H N N 168 GLU HXT H N N 169 GLY N N N N 170 GLY CA C N N 171 GLY C C N N 172 GLY O O N N 173 GLY OXT O N N 174 GLY H H N N 175 GLY H2 H N N 176 GLY HA2 H N N 177 GLY HA3 H N N 178 GLY HXT H N N 179 HIS N N N N 180 HIS CA C N S 181 HIS C C N N 182 HIS O O N N 183 HIS CB C N N 184 HIS CG C Y N 185 HIS ND1 N Y N 186 HIS CD2 C Y N 187 HIS CE1 C Y N 188 HIS NE2 N Y N 189 HIS OXT O N N 190 HIS H H N N 191 HIS H2 H N N 192 HIS HA H N N 193 HIS HB2 H N N 194 HIS HB3 H N N 195 HIS HD1 H N N 196 HIS HD2 H N N 197 HIS HE1 H N N 198 HIS HE2 H N N 199 HIS HXT H N N 200 HOH O O N N 201 HOH H1 H N N 202 HOH H2 H N N 203 ILE N N N N 204 ILE CA C N S 205 ILE C C N N 206 ILE O O N N 207 ILE CB C N S 208 ILE CG1 C N N 209 ILE CG2 C N N 210 ILE CD1 C N N 211 ILE OXT O N N 212 ILE H H N N 213 ILE H2 H N N 214 ILE HA H N N 215 ILE HB H N N 216 ILE HG12 H N N 217 ILE HG13 H N N 218 ILE HG21 H N N 219 ILE HG22 H N N 220 ILE HG23 H N N 221 ILE HD11 H N N 222 ILE HD12 H N N 223 ILE HD13 H N N 224 ILE HXT H N N 225 LEU N N N N 226 LEU CA C N S 227 LEU C C N N 228 LEU O O N N 229 LEU CB C N N 230 LEU CG C N N 231 LEU CD1 C N N 232 LEU CD2 C N N 233 LEU OXT O N N 234 LEU H H N N 235 LEU H2 H N N 236 LEU HA H N N 237 LEU HB2 H N N 238 LEU HB3 H N N 239 LEU HG H N N 240 LEU HD11 H N N 241 LEU HD12 H N N 242 LEU HD13 H N N 243 LEU HD21 H N N 244 LEU HD22 H N N 245 LEU HD23 H N N 246 LEU HXT H N N 247 LYS N N N N 248 LYS CA C N S 249 LYS C C N N 250 LYS O O N N 251 LYS CB C N N 252 LYS CG C N N 253 LYS CD C N N 254 LYS CE C N N 255 LYS NZ N N N 256 LYS OXT O N N 257 LYS H H N N 258 LYS H2 H N N 259 LYS HA H N N 260 LYS HB2 H N N 261 LYS HB3 H N N 262 LYS HG2 H N N 263 LYS HG3 H N N 264 LYS HD2 H N N 265 LYS HD3 H N N 266 LYS HE2 H N N 267 LYS HE3 H N N 268 LYS HZ1 H N N 269 LYS HZ2 H N N 270 LYS HZ3 H N N 271 LYS HXT H N N 272 MET N N N N 273 MET CA C N S 274 MET C C N N 275 MET O O N N 276 MET CB C N N 277 MET CG C N N 278 MET SD S N N 279 MET CE C N N 280 MET OXT O N N 281 MET H H N N 282 MET H2 H N N 283 MET HA H N N 284 MET HB2 H N N 285 MET HB3 H N N 286 MET HG2 H N N 287 MET HG3 H N N 288 MET HE1 H N N 289 MET HE2 H N N 290 MET HE3 H N N 291 MET HXT H N N 292 PHE N N N N 293 PHE CA C N S 294 PHE C C N N 295 PHE O O N N 296 PHE CB C N N 297 PHE CG C Y N 298 PHE CD1 C Y N 299 PHE CD2 C Y N 300 PHE CE1 C Y N 301 PHE CE2 C Y N 302 PHE CZ C Y N 303 PHE OXT O N N 304 PHE H H N N 305 PHE H2 H N N 306 PHE HA H N N 307 PHE HB2 H N N 308 PHE HB3 H N N 309 PHE HD1 H N N 310 PHE HD2 H N N 311 PHE HE1 H N N 312 PHE HE2 H N N 313 PHE HZ H N N 314 PHE HXT H N N 315 PRO N N N N 316 PRO CA C N S 317 PRO C C N N 318 PRO O O N N 319 PRO CB C N N 320 PRO CG C N N 321 PRO CD C N N 322 PRO OXT O N N 323 PRO H H N N 324 PRO HA H N N 325 PRO HB2 H N N 326 PRO HB3 H N N 327 PRO HG2 H N N 328 PRO HG3 H N N 329 PRO HD2 H N N 330 PRO HD3 H N N 331 PRO HXT H N N 332 SER N N N N 333 SER CA C N S 334 SER C C N N 335 SER O O N N 336 SER CB C N N 337 SER OG O N N 338 SER OXT O N N 339 SER H H N N 340 SER H2 H N N 341 SER HA H N N 342 SER HB2 H N N 343 SER HB3 H N N 344 SER HG H N N 345 SER HXT H N N 346 THR N N N N 347 THR CA C N S 348 THR C C N N 349 THR O O N N 350 THR CB C N R 351 THR OG1 O N N 352 THR CG2 C N N 353 THR OXT O N N 354 THR H H N N 355 THR H2 H N N 356 THR HA H N N 357 THR HB H N N 358 THR HG1 H N N 359 THR HG21 H N N 360 THR HG22 H N N 361 THR HG23 H N N 362 THR HXT H N N 363 TRP N N N N 364 TRP CA C N S 365 TRP C C N N 366 TRP O O N N 367 TRP CB C N N 368 TRP CG C Y N 369 TRP CD1 C Y N 370 TRP CD2 C Y N 371 TRP NE1 N Y N 372 TRP CE2 C Y N 373 TRP CE3 C Y N 374 TRP CZ2 C Y N 375 TRP CZ3 C Y N 376 TRP CH2 C Y N 377 TRP OXT O N N 378 TRP H H N N 379 TRP H2 H N N 380 TRP HA H N N 381 TRP HB2 H N N 382 TRP HB3 H N N 383 TRP HD1 H N N 384 TRP HE1 H N N 385 TRP HE3 H N N 386 TRP HZ2 H N N 387 TRP HZ3 H N N 388 TRP HH2 H N N 389 TRP HXT H N N 390 TYR N N N N 391 TYR CA C N S 392 TYR C C N N 393 TYR O O N N 394 TYR CB C N N 395 TYR CG C Y N 396 TYR CD1 C Y N 397 TYR CD2 C Y N 398 TYR CE1 C Y N 399 TYR CE2 C Y N 400 TYR CZ C Y N 401 TYR OH O N N 402 TYR OXT O N N 403 TYR H H N N 404 TYR H2 H N N 405 TYR HA H N N 406 TYR HB2 H N N 407 TYR HB3 H N N 408 TYR HD1 H N N 409 TYR HD2 H N N 410 TYR HE1 H N N 411 TYR HE2 H N N 412 TYR HH H N N 413 TYR HXT H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GDP PB O1B doub N N 83 GDP PB O2B sing N N 84 GDP PB O3B sing N N 85 GDP PB O3A sing N N 86 GDP O2B HOB2 sing N N 87 GDP O3B HOB3 sing N N 88 GDP O3A PA sing N N 89 GDP PA O1A doub N N 90 GDP PA O2A sing N N 91 GDP PA "O5'" sing N N 92 GDP O2A HOA2 sing N N 93 GDP "O5'" "C5'" sing N N 94 GDP "C5'" "C4'" sing N N 95 GDP "C5'" "H5'" sing N N 96 GDP "C5'" "H5''" sing N N 97 GDP "C4'" "O4'" sing N N 98 GDP "C4'" "C3'" sing N N 99 GDP "C4'" "H4'" sing N N 100 GDP "O4'" "C1'" sing N N 101 GDP "C3'" "O3'" sing N N 102 GDP "C3'" "C2'" sing N N 103 GDP "C3'" "H3'" sing N N 104 GDP "O3'" "HO3'" sing N N 105 GDP "C2'" "O2'" sing N N 106 GDP "C2'" "C1'" sing N N 107 GDP "C2'" "H2'" sing N N 108 GDP "O2'" "HO2'" sing N N 109 GDP "C1'" N9 sing N N 110 GDP "C1'" "H1'" sing N N 111 GDP N9 C8 sing Y N 112 GDP N9 C4 sing Y N 113 GDP C8 N7 doub Y N 114 GDP C8 H8 sing N N 115 GDP N7 C5 sing Y N 116 GDP C5 C6 sing N N 117 GDP C5 C4 doub Y N 118 GDP C6 O6 doub N N 119 GDP C6 N1 sing N N 120 GDP N1 C2 sing N N 121 GDP N1 HN1 sing N N 122 GDP C2 N2 sing N N 123 GDP C2 N3 doub N N 124 GDP N2 HN21 sing N N 125 GDP N2 HN22 sing N N 126 GDP N3 C4 sing N N 127 GLN N CA sing N N 128 GLN N H sing N N 129 GLN N H2 sing N N 130 GLN CA C sing N N 131 GLN CA CB sing N N 132 GLN CA HA sing N N 133 GLN C O doub N N 134 GLN C OXT sing N N 135 GLN CB CG sing N N 136 GLN CB HB2 sing N N 137 GLN CB HB3 sing N N 138 GLN CG CD sing N N 139 GLN CG HG2 sing N N 140 GLN CG HG3 sing N N 141 GLN CD OE1 doub N N 142 GLN CD NE2 sing N N 143 GLN NE2 HE21 sing N N 144 GLN NE2 HE22 sing N N 145 GLN OXT HXT sing N N 146 GLU N CA sing N N 147 GLU N H sing N N 148 GLU N H2 sing N N 149 GLU CA C sing N N 150 GLU CA CB sing N N 151 GLU CA HA sing N N 152 GLU C O doub N N 153 GLU C OXT sing N N 154 GLU CB CG sing N N 155 GLU CB HB2 sing N N 156 GLU CB HB3 sing N N 157 GLU CG CD sing N N 158 GLU CG HG2 sing N N 159 GLU CG HG3 sing N N 160 GLU CD OE1 doub N N 161 GLU CD OE2 sing N N 162 GLU OE2 HE2 sing N N 163 GLU OXT HXT sing N N 164 GLY N CA sing N N 165 GLY N H sing N N 166 GLY N H2 sing N N 167 GLY CA C sing N N 168 GLY CA HA2 sing N N 169 GLY CA HA3 sing N N 170 GLY C O doub N N 171 GLY C OXT sing N N 172 GLY OXT HXT sing N N 173 HIS N CA sing N N 174 HIS N H sing N N 175 HIS N H2 sing N N 176 HIS CA C sing N N 177 HIS CA CB sing N N 178 HIS CA HA sing N N 179 HIS C O doub N N 180 HIS C OXT sing N N 181 HIS CB CG sing N N 182 HIS CB HB2 sing N N 183 HIS CB HB3 sing N N 184 HIS CG ND1 sing Y N 185 HIS CG CD2 doub Y N 186 HIS ND1 CE1 doub Y N 187 HIS ND1 HD1 sing N N 188 HIS CD2 NE2 sing Y N 189 HIS CD2 HD2 sing N N 190 HIS CE1 NE2 sing Y N 191 HIS CE1 HE1 sing N N 192 HIS NE2 HE2 sing N N 193 HIS OXT HXT sing N N 194 HOH O H1 sing N N 195 HOH O H2 sing N N 196 ILE N CA sing N N 197 ILE N H sing N N 198 ILE N H2 sing N N 199 ILE CA C sing N N 200 ILE CA CB sing N N 201 ILE CA HA sing N N 202 ILE C O doub N N 203 ILE C OXT sing N N 204 ILE CB CG1 sing N N 205 ILE CB CG2 sing N N 206 ILE CB HB sing N N 207 ILE CG1 CD1 sing N N 208 ILE CG1 HG12 sing N N 209 ILE CG1 HG13 sing N N 210 ILE CG2 HG21 sing N N 211 ILE CG2 HG22 sing N N 212 ILE CG2 HG23 sing N N 213 ILE CD1 HD11 sing N N 214 ILE CD1 HD12 sing N N 215 ILE CD1 HD13 sing N N 216 ILE OXT HXT sing N N 217 LEU N CA sing N N 218 LEU N H sing N N 219 LEU N H2 sing N N 220 LEU CA C sing N N 221 LEU CA CB sing N N 222 LEU CA HA sing N N 223 LEU C O doub N N 224 LEU C OXT sing N N 225 LEU CB CG sing N N 226 LEU CB HB2 sing N N 227 LEU CB HB3 sing N N 228 LEU CG CD1 sing N N 229 LEU CG CD2 sing N N 230 LEU CG HG sing N N 231 LEU CD1 HD11 sing N N 232 LEU CD1 HD12 sing N N 233 LEU CD1 HD13 sing N N 234 LEU CD2 HD21 sing N N 235 LEU CD2 HD22 sing N N 236 LEU CD2 HD23 sing N N 237 LEU OXT HXT sing N N 238 LYS N CA sing N N 239 LYS N H sing N N 240 LYS N H2 sing N N 241 LYS CA C sing N N 242 LYS CA CB sing N N 243 LYS CA HA sing N N 244 LYS C O doub N N 245 LYS C OXT sing N N 246 LYS CB CG sing N N 247 LYS CB HB2 sing N N 248 LYS CB HB3 sing N N 249 LYS CG CD sing N N 250 LYS CG HG2 sing N N 251 LYS CG HG3 sing N N 252 LYS CD CE sing N N 253 LYS CD HD2 sing N N 254 LYS CD HD3 sing N N 255 LYS CE NZ sing N N 256 LYS CE HE2 sing N N 257 LYS CE HE3 sing N N 258 LYS NZ HZ1 sing N N 259 LYS NZ HZ2 sing N N 260 LYS NZ HZ3 sing N N 261 LYS OXT HXT sing N N 262 MET N CA sing N N 263 MET N H sing N N 264 MET N H2 sing N N 265 MET CA C sing N N 266 MET CA CB sing N N 267 MET CA HA sing N N 268 MET C O doub N N 269 MET C OXT sing N N 270 MET CB CG sing N N 271 MET CB HB2 sing N N 272 MET CB HB3 sing N N 273 MET CG SD sing N N 274 MET CG HG2 sing N N 275 MET CG HG3 sing N N 276 MET SD CE sing N N 277 MET CE HE1 sing N N 278 MET CE HE2 sing N N 279 MET CE HE3 sing N N 280 MET OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 THR N CA sing N N 335 THR N H sing N N 336 THR N H2 sing N N 337 THR CA C sing N N 338 THR CA CB sing N N 339 THR CA HA sing N N 340 THR C O doub N N 341 THR C OXT sing N N 342 THR CB OG1 sing N N 343 THR CB CG2 sing N N 344 THR CB HB sing N N 345 THR OG1 HG1 sing N N 346 THR CG2 HG21 sing N N 347 THR CG2 HG22 sing N N 348 THR CG2 HG23 sing N N 349 THR OXT HXT sing N N 350 TRP N CA sing N N 351 TRP N H sing N N 352 TRP N H2 sing N N 353 TRP CA C sing N N 354 TRP CA CB sing N N 355 TRP CA HA sing N N 356 TRP C O doub N N 357 TRP C OXT sing N N 358 TRP CB CG sing N N 359 TRP CB HB2 sing N N 360 TRP CB HB3 sing N N 361 TRP CG CD1 doub Y N 362 TRP CG CD2 sing Y N 363 TRP CD1 NE1 sing Y N 364 TRP CD1 HD1 sing N N 365 TRP CD2 CE2 doub Y N 366 TRP CD2 CE3 sing Y N 367 TRP NE1 CE2 sing Y N 368 TRP NE1 HE1 sing N N 369 TRP CE2 CZ2 sing Y N 370 TRP CE3 CZ3 doub Y N 371 TRP CE3 HE3 sing N N 372 TRP CZ2 CH2 doub Y N 373 TRP CZ2 HZ2 sing N N 374 TRP CZ3 CH2 sing Y N 375 TRP CZ3 HZ3 sing N N 376 TRP CH2 HH2 sing N N 377 TRP OXT HXT sing N N 378 TYR N CA sing N N 379 TYR N H sing N N 380 TYR N H2 sing N N 381 TYR CA C sing N N 382 TYR CA CB sing N N 383 TYR CA HA sing N N 384 TYR C O doub N N 385 TYR C OXT sing N N 386 TYR CB CG sing N N 387 TYR CB HB2 sing N N 388 TYR CB HB3 sing N N 389 TYR CG CD1 doub Y N 390 TYR CG CD2 sing Y N 391 TYR CD1 CE1 sing Y N 392 TYR CD1 HD1 sing N N 393 TYR CD2 CE2 doub Y N 394 TYR CD2 HD2 sing N N 395 TYR CE1 CZ doub Y N 396 TYR CE1 HE1 sing N N 397 TYR CE2 CZ sing Y N 398 TYR CE2 HE2 sing N N 399 TYR CZ OH sing N N 400 TYR OH HH sing N N 401 TYR OXT HXT sing N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GDP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GDP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5CVH _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6YPK _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.017331 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006646 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022041 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016869 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_